Cyanidioschyzon merolae Genome Project

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CDS#4270
LocusCMQ215C [Show EST mapping]
Locationc17f0001 542677>548718 [Show ORF map]
Annotationchromodomain helicase DNA binding protein CHD
Commentsthe only CHD protein. KOG{KOG0384}
Deduced sequenceMGLQLEHTGRRLRGDSARQSKRSRSESSSGTDALSEASSWLRDESSGLYPEAEGVRRQPR
RSARASRSMRVESSASEQSDEALYLSDSSTSSQSSTGADSEACVPRAKRRREARGSEATR
SSRGEVEEVSDAHTPRTPGDQGASLDSYPMERILARRVRHMTLEEAAEMNSSLSPASKVS
AGAEERSPAEGSGDRGRLRTPMVEEYLIKFRGLSYIHCQWVREDFILAQPSGKQRLQRFL
SKEQQEAAYRGVRGVLGSASDAEDHDEEDEAIPEDFVTVDRIIAEHVGPDGTRQFLVKWC
SLGYDECTWEYEHEVQDDLKIKEFYERNTLPPESERKRPPRPNPASFVRLSNPSFKNGGE
LREYQLEGLNWLVHCWFKRQGSILADEMGLGKTIQAVSFLDYLYREQHLRGPFLVVAPLS
TLGHWKREFETWTHMNAIVFHGNVRARDVILQYEWTYAGMSVRSGLFKWHVLITTYEIIL
QEANRLRGIPWAVIVVDEAHRLKNRQSKLFDELLGFRSEHRVLLTGTPLQNNSLELFSLL
HFLEPAKFPNEKEFQQAYGDIRDAEAVENLKALLRPYLLRRMKEDVEKAIPPKEETLISV
ELTRIQKQWYRALYEQNFAFLEQGGKRNNVGNLRNIVMELRKCCNHPYLIRGVEEIETQS
LAALGEDALMRHLVEASGKLVLVDKLLPVLREKGHRVLIFSQMIRVLDILEDYLHWRGYK
FERLDGRVRGNDRQQSIDRFQKDPENFVFLLCTRAGGQGINLTVADTVIIFDSDWNPQND
VQAQARCHRIGQERDVKVYRLITRGTYEEEMFDRASKKLGLDQAVLQNMGVDQGGSGNML
STMGRDDINRLLRRGAYDVFNEDDSAADAFTAENIENIMARRTKTIKTGGAGDVGPSAFS
KATFTADADGMFGDETWLNDKEFWKKLMPLAASAPNPDIIYEPRRRRQVQRFQPGENSDE
ESGEHESDSDEADLSEDKLGPDGRKLWNKSERHRFHRAMLTYGYGEWERIAQAMARAQKS
ANQRSVFEVQRAARSWLRLLAEHTAAALVAGDAADATQQERLAQERLVKLCNEKRVLQAA
FEPWIDENTQQPVDESFTEPVFTEDSYLDAMERNGYNWIERLECIEDIKDLVRNGDVDGE
IPSITASGIYVMPDWWDAEFDRALILGTHRHGYGQYDDMRRDPDLHFFGRLAPLPQPEPG
NGNAAEDGDARLAEWTALDQSYREKAASLGLDAEQLRAREMPTLHILNTRLKKLLKAFQR
LRRRQDRRRSQLEQAEERARAREEQQLARRRQREAFERERSARFEVQAQRWSKREKHDFG
RLLGRLGGVVYDADGRIDWSVYKERCQLSRKFDYNLERMYIEMLAMARESFRRTGDDALA
KALDEPIEYALQWRASQHESRLAEMQRLSRESSDAATRLAALEECLRAPQLEGFPPTELE
ELRTLFILSRRFVERVRVLHFIRVVAAPLLQNPELCSHLIENIPPPRSDTLPSWWRVAEG
HDLALLRGVIRYGFDTAPLALDPSLPFLPICSDLAQRASTAERAPEDGDLSTAETETRST
NNENDIVAMFAKHRGVFLRARIAAEVLVYGRIERVHASASSGSVKPDALPPQVPPLPMDT
SSMITHAAGTLGSLRVYATASGEPISSEGGDDFEPVPLELVTVDMLQTFKQLKKRASGVV
DVSSLPEQVVSLGRLLQRQMIREETMSGSTGLEHRSSAPAAAAAAAASLDMVTASAGSSG
KNASLVPSLATATAERCGHTGDTETNPVPVATGQRAVVPAAAAAGSTGHGSASQPQVRRS
QLHKVARDEHGNVRLPIQIGVVLRIESLGHIDPRESFHNERAIYPVGYRSVRTYTSCVDV
NRSTQYVSEILDRDGHPWFRVTCADMPEEPFEDKSPSGCWSQIMRIIRERTPLDRRRVHA
TVSGPEYFGLTQPIVEELLQSLPGAAQLKNYNFKRFLSPEKAESEESLHPLGAATDSPAA
GTAQEQLRAVERAKTMADPVRIRLCLEPMETNPD
(2014 aa; 227.72 kDa) [Nucleotide sequence] [BLAST result]
Features[TransMembrane]
Dispatch[CD Search/SMART]
External[KEGG/GFIT]