Cyanidioschyzon merolae Genome Project

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c16f0001   701501  CGTCGCGCGTAG-AATTGTTTA-CCGGTGTGTTGCTGCCGCTCGCTGAAGCGCTGCAATG  701558
rsz59d19   1                      .......-..........................N..........  44
rsz86p06   1                                 ..................................  34
rsz89c24   1                      .......C.....................................  45
rsz92l19   1                     ........-.....................................  45
rsz70b02   1       ............N.........-.........................G...........  59
rsz41m14   1                       ......-..........................A..........  43

c16f0001   701559  GG-AGGTGCTCTCCAACGA-G-AGCACGTTGCACACAGATCCGGTGCTCCGAGAGCGCCT  701615
rsz59d19   45      ..-................-.N......................................  102
rsz86p06   35      ..-................-.T......................................  92
rsz89c24   46      ..-................-.-......................................  102
rsz92l19   46      ..-................-.-......................................  102
rsz70b02   60      ..-................G.-......................................  117
rsz41m14   44      ..N................-.N......................................  102

c16f0001   701616  TCTCATCCGCTTGGTCATGGTGCTGAACCGGTTCTGGCTTTTGCAGCACATGCTGTTGCA  701675
rsz59d19   103     ............................................................  162
rsz86p06   93      ............................................................  152
rsz89c24   103     ............................................................  162
rsz92l19   103     ............................................................  162
rsz70b02   118     ............................................................  177
rsz41m14   103     ............................................................  162

c16f0001   701676  GCAAGTACCAGAAACGACCATCAACGACTGGTGGATGCGCCTAGTGCGCATCCTAGGTGA  701735
rsz59d19   163     ............................................................  222
rsz86p06   153     ...........................................N...........N....  212
rsz89c24   163     ...........................................................G  222
rsz92l19   163     ............................................................  222
rsz70b02   178     ............................................................  237
rsz41m14   163     ..G....................................................N....  222

c16f0001   701736  CCTGTACGCTGTTGCGGTACGGCGTTCGCGAGCACAGCGCCTCGCTGGCGTCTCCGACGG  701795
rsz59d19   223     ............................................................  282
rsz86p06   213     ............................................................  272
rsz89c24   223     ............................................................  282
rsz92l19   223     ............................................................  282
rsz70b02   238     ............................................................  297
rsz41m14   223     T...........................................................  282

c16f0001   701796  CCGCTGGGCATCGGCACCGGTGCCTGTAGCGGCCTCGGAGACGCTCGCGGAGCACATCCA  701855
rsz59d19   283     ............................................................  342
rsz86p06   273     ............................................................  332
rsz89c24   283     ............................................................  342
rsz92l19   283     ............................................................  342
rsz70b02   298     ............................................................  357
rsz41m14   283     ............................N...............................  342

c16f0001   701856  TGAGACGCTCAAG-AATACGCTCCTGGTTATGGTAACGGGTGGTTTTCTGGATCCAACTC  701914
rsz59d19   343     .............-..............................................  401
rsz86p06   333     .............-..............................................  391
rsz89c24   343     .............-..............................................  401
rsz92l19   343     .............-..............................................  401
rsz70b02   358     .............-..........C...................................  416
rsz41m14   343     ...N.........C.............................N................  402

c16f0001   701915  TGGAGCTTGCTGGTGCAGAAACGACCGCTGTCACTGAGAATGCGTGCAGTACAGCTGCTC  701974
rsz59d19   402     ..................G.........................................  461
rsz86p06   392     ............................................................  451
rsz89c24   402     ............................................................  461
rsz92l19   402     ............................................................  461
rsz70b02   417     ....A...                                                      424
rsz41m14   403     ....N....                                                     411

c16f0001   701975  GACGTTGGTCGGAGACGTTCACGCTTCTGGCTCCGCTGTTTCCCGCGCTCGAGGAGGACC  702034
rsz59d19   462     ............................................................  521
rsz86p06   452     ....................................................N.......  511
rsz89c24   462     ............................................................  521
rsz92l19   462     ............................................................  521

c16f0001   702035  TGTTGGGACTTTTGGCGCAAGCACCGATGCATCGCTCTCGCGCTGTTCAGCGAGACACGG  702094
rsz59d19   522     ............................................................  581
rsz86p06   512     ............................................................  571
rsz89c24   522     ............................................................  581
rsz92l19   522     .................................................N..........  581

c16f0001   702095  ACGCCGCCCATACGCTTGCCGAACAAAAAATCAGTCCGACACCCGTGGATGTTCCACAGC  702154
rsz59d19   582     ............................................................  641
rsz86p06   572     .................................N..........................  631
rsz89c24   582     ......N.....................................................  641
rsz92l19   582     ..........................................................A.  641

c16f0001   702155  GACCGGATGATGTCACGACGCATACACTGACCGAGACGAGCGCTCAGACAACGGACGCCA  702214
rsz59d19   642     ............................................................  701
rsz86p06   632     ..................................T....N......N.............  691
rsz89c24   642     ..............................................                687
rsz92l19   642     .............T...........N.....                               672

c16f0001   702215  GCACGTCCA-CCTATGAATCGGCAGCGCCGAGTGCGGTGCTCTGCACCGACGAGCACTCC  702273
rsz59d19   702     .........-......................................              748
rsz86p06   692     .........C....................                                721

c16f0001   702274  TGTACCGAACTGGACAAGTAAAAAAGCAAGACGATGAGGCGCGCATTGCAGTGCATGCTC  702333
rsz91c07   1                                              .....................  21

c16f0001   702334  GATGgtgtgtgtgtgtgtgtgtgCATTCTGAAACCGCTCGCGATTGTGTATGATGGAAAG  702393
rsz91c07   22      ............................................................  81

c16f0001   702394  CAACGTTCACAAATAGGCGTGTAGGTGCGTAAAGGCGTATACGCGTCTGTGTGTGCGTCT  702453
rsz91c07   82      ............................................................  141

c16f0001   702454  GCGTATGCATTCGTGCATTCCTCTTTGTTACATCGACCTCTTCGCGGGGAGACGAGTGCA  702513
rsz91c07   142     ............................................................  201

c16f0001   702514  AACGTCGCGAACCGGGTGCATAGAGAGAGGCCAATAGCGCACAGTTCGCTGCGAAAAAGG  702573
rsz91c07   202     ............................................................  261

c16f0001   702574  ACCAAGAAACGAGACAAGGTAGATCGACCGTATCTGCATGGCTACACCTGATCGGAGTGC  702633
rsz91c07   262     .....................N......................................  321

c16f0001   702634  ACCCTTCTGCAAACGATGCGGTTTGGTTCAGATCGTAGGCACCCAAAGTCATGCGCCTTG  702693
rsz91c07   322     .....................................N......................  381

c16f0001   702694  GTGAGAGCGTTTCATGGTGCAGAGCAGTCGCGCTCGCCTTGTCCCGTGTCGTCTATTTGT  702753
rsz91c07   382     ............................................................  441

c16f0001   702754  GATCAGGGCAAGTGCGAGGCGTCCAGCAGCGCACAGAGTTCAACGCTCGACTAGGTCGCT  702813
rsz91c07   442     ............................................................  501

c16f0001   702814  CGGCTCGTACACTCTGTGGTATTGTTGTTGTGACTGCGGTTGCCGTGCTCTGGGGAATCA  702873
rsz91c07   502     ..............................N.............................  561

c16f0001   702874  GCGACAAGCCGCGAGCATTCCATCTGGGGATGGTTTTACGAAACGTCTTCTCTTTGCTGA  702933
rsz56o01   1                             ......................................  38
rsz91c07   562     ............................................................  621
rsz54m24   1                             ...............-......................  37

c16f0001   702934  ACCCCGGCGGGTTGGCACTTGAAAGGACTCCACA-GGGCAAGTGAACGCGTACGAGCACC  702992
rsz56o01   39      .....................-............-.........................  96
rsz91c07   622     ........................N.........-.........................  680
rsz54m24   38      ..................................G.........................  97

c16f0001   702993  AGCGCGTCTTCAAT-CGTGTGCGGGCACTTGTGGAAAACGCGACGCCGACTGGACTTGCA  703051
rsz56o01   97      ..............-.............................................  155
rsz91c07   681     ..............-................                               710
rsz54m24   98      .N............A.............................................  157

c16f0001   703052  GGATGCATCAAGCTGTTCATCGCGAGTTTCGATCGCGCAAGGAATCAAGAACGACACGGT  703111
rsz56o01   156     ............................................................  215
rsz54m24   158     N............................N..............................  217

c16f0001   703112  GCTTGCATGACAGCTAGCCTCGAAAGCGATGAACAAAACACCACCGATCGAGGCCTAACA  703171
rsz56o01   216     ............................................................  275
rsz54m24   218     .............N..............................................  277

c16f0001   703172  TTGCAGTGACGCAATAACGGATCATGAACGGCATTGTGCTTGCATCAAAAGGTCGTACCT  703231
rsz56o01   276     ............................................................  335
rsz54m24   278     .....NN...N.................................................  337
sz59d19    301                                                             ....  298

c16f0001   703232  GGTTGGCCTGGAACTTTGGCGCTGCCTCCACAACGATAACTCTCGGAGCCACCACCATAA  703291
rsz56o01   336     ............................................................  395
rsz54m24   338     ............................................N...............  397
rsz70b02   416            .....................................................  468
sz59d19    297     .........................................N..................  238

c16f0001   703292  AATGAAATTGCGTGCTTCTTCACTTGATACCCGAGCGCACATGCGCTTCAGCATATGTGC  703351
rsz56o01   396     ............................................................  455
rsz54m24   398     ............................................................  457
rsz70b02   469     ............................................................  528
sz89c24    613                     ............................................  570
sz59d19    237     ............................................................  178

c16f0001   703352  TCCGTGGCGAGCACACAAAGGATGCCACTGACCAAGCCAGTCATTTGCCAGAGCGTGCGC  703411
rsz56o01   456     ............................................................  515
rsz54m24   458     ............................................................  517
rsz70b02   529     ............................................................  588
sz89c24    569     ............................................................  510
sz59d19    177     ............................................................  118

c16f0001   703412  TGCATATGCTTTCGACGTGGACTCGCGAAAGTTTTCGTTGCTCCCTGATGAACCGGAGCG  703471
rsz56o01   516     ............................................................  575
rsz54m24   518     ............................................................  577
rsz70b02   589     ............................................A...............  648
sz89c24    509     ............................................................  450
sz59d19    117     ....................G.......................................  58

c16f0001   703472  AAGAACGGTACAGTTTGTTGCATCTGAGATAGCAGATTCGTTGTGGCGAGGTAGAGGAGT  703531
rsz56o01   576     ............................................................  635
rsz54m24   578     ..C...........................                                607
rsz70b02   649     ..................................................            698
sz89c24    449     ............................................................  390
sz59d19    57      ......................................                        20

c16f0001   703532  CCACCTGCGGCGAACGGGGCTACTCGCCGTTGGACAGAAGCGAGCATCATCGGAACAGAA  703591
rsz56o01   636     ............................................................  695
sz89c24    389     ...                                                           387

c16f0001   703592  GCATCCAAGGATTCGCCTAGTCGATATCCAAGCATCCAGTATCCACAAAAGACGACCAGT  703651
rsz56o01   696     ......................................                        733
sz41m14    562                      ...........................................  520

c16f0001   703652  GCACCAGCAACAGCACTCAGCGAACATACCAGGTTCAGGTAGAGCGCCCGGAACGGGGTA  703711
sz41m14    519     ............................................................  460

c16f0001   703712  AAACCTGCCTGTACGAGCACCAGGTAGTCACTGATCTCCTGCGGGAGCTCGTGCAGCCAT  703771
sz41m14    459     ............................................................  400

c16f0001   703772  ACCGCAACCGTCGTGATGATCCCGTTTCTTCGTTGTGTCAGAAAGGCAGCTGCAATCGCC  703831
sz56o01    627                                    .............................  599
sz41m14    399     ............................................................  340

c16f0001   703832  AGCCCGTCGACAAAGTTGTGGACACCGTCGGCGATAAGATTCAACCAACCCACTGGTGCA  703891
sz56o01    598     ............................................................  539
sz41m14    339     ............................................................  280

c16f0001   703892  ACAGGTGCCTTGGACGCGCTCGAAGCAGGTCGCTTGCCGTCAGCAGTCGCTTCAACGGTA  703951
sz56o01    538     ............................................................  479
sz41m14    279     ............................................................  220
sz92l19    324                       ..........................................  283

c16f0001   703952  GCGTTTGGAGTCGCACTTAGGTGCAGCCACTGTACGAACTTCTCCAGAAGAAAAAACGTG  704011
sz56o01    478     ............................................................  419
sz41m14    219     ............................................................  160
sz86p06    385                                                  ...............  371
sz92l19    282     ............................................................  223
sz54m24    160                                                    ..N.........N  148

c16f0001   704012  ACGAGTCCAGTCAGCATGCCGCCCGCAGTCACGTGATCGTGAGCGTGGTGGTGCACACTT  704071
sz56o01    418     ............................................................  359
sz41m14    159     ...........................                                   133
sz89c24    393       ..........................................................  336
sz86p06    370     ............................................................  311
sz92l19    222     ............................................................  163
sz54m24    147     .................N..........................................  88

c16f0001   704072  TCGTGGTGCGCCGCGACCTCGGCC-CCCGCAAAGCACCTCGGCAGCAGGTGGAACACGAC  704130
sz56o01    358     ........................-...................................  300
sz41m14    142                          ...G...................................  104
sz89c24    335     ........................-...................................  277
sz86p06    310     ........................-...................................  252
sz92l19    162     ........................-...................................  104
sz54m24    87      .N......................-..............................NN...  29

c16f0001   704131  GTCAGCCAGGAGTGCTCCGGCAGCGAATCCACTTCCGATGTCGCTTAGTGGCATCGACCA  704190
sz56o01    299     ............................................................  240
sz41m14    103     ............................................................  44
sz89c24    276     ............................................................  217
sz86p06    251     ............................................................  192
sz92l19    103     ............................................................  44
sz54m24    28      ............................                                  1

c16f0001   704191  CGGGGAAGCGCGCCGCACGACTCGCTTCCCGAGCGGTAGACATAGCAGTGCTGCAGCTGC  704250
sz56o01    239     ............................................................  180
sz41m14    43      ...........................................                   1
sz89c24    216     ............................................................  157
sz86p06    191     ............................................................  132
sz92l19    43      ...........................................                   1

c16f0001   704251  GGTAGCCGACGCCGACACCAACGCCCCCGCCACCGACTCCAGGAACGCACGCCAGACCTG  704310
sz56o01    179     ............................................................  120
sz89c24    156     ............................................................  97
sz86p06    131     ............................................................  72

c16f0001   704311  GAGCATGTTGCAGGTAGCGTCTTTTGAAGCGTTCGACGGCTAACGCTCGGGCACGCAAAC  704370
sz56o01    119     ............................................................  60
sz89c24    96      ............................................................  37
sz86p06    71      ............................................................  12

c16f0001   704371  TGCACCAGGGACCTAATCAAAGTCTGGAACAACAATACCACCGATAACGGCAGTAGCGCG  704430
sz56o01    59      ...........................................................   1
sz89c24    36      ....................................                          1
sz86p06    11      ...........                                                   1

c16f0001   704431  ACCTGGAGGCGCCAGCGTTCCGAGCAGCACGCTCTGGTGCTGGTCTCCCGTCCATGCCTC  704490

c16f0001   704491  TGGGGCGACGCCTGCGGATATGCAGCAAACGGTGTCGGTGCGGCGGGAGTCAGCGCCAGA  704550

c16f0001   704551  TATTGCACATCTAGTCACATACTGCACAGCATTCGAACACCCTGTGTCGTGCAGTGATGC  704610

c16f0001   704611  CAGGCTCATGGCACATGAAGCAAGGAGGTCGTTCGGGATCATGATCGAGACGCGAACCTC  704670

c16f0001   704671  GCAATCGAGCGTTTCGCTGGTGGTGTATTCACCATTGCGACGCTTTCGGTTGTCGCAAGA  704730

c16f0001   704731  CGGCGTTTCCAACGTCGAGGTTACTCATTTCTATTGCCGTCTGGCTGTTGGTTGCCTGGT  704790

c16f0001   704791  TTCACAGTACACAAAAATGAACCTGTGGAGGAAGAACCGTTATGCAGTTTGATTTGTTGG  704850

c16f0001   704851  TTTTCACGTCGCAGGCGGGCCACGCACTGCGGCACGATCACGCGTCGTGCAGCACCGACA  704910

c16f0001   704911  TGAGGCACTTGATCCTACGCTGACAATACTTGAAGCGTCGTGACTTCAAGGATCATCACA  704970
sz70b02    419                                .................................  387

c16f0001   704971  AACGATACAGACACGTCCTGGATGCGTCTGCAAACCATTCTTATCGTGCGAGTTCAACGT  705030
sz70b02    386     ............................................................  327

c16f0001   705031  GTCTGCGCAGGATCTCCCCAGATACGGGATTGCTGGCGGCGACCGGCGAAGAAAAGCGTA  705090
sz70b02    326     ............................................................  267

c16f0001   705091  CCGTTCTGTTGCGGAAGCTCTCGGGAATCACGAGGTTGCGATCCATGTTCTCGTTGGCAA  705150
sz70b02    266     .......................................                       228

c16f0001   705151  GAAGGCGGAAATGGATCCCGAAGGCCTCTGAATGCCGAACTGACAGCGGATGCTTCGAGC  705210

c16f0001   705211  GACACTGGAACGGCTGGATCTGTCGTCGTCCTATGATGACGGGGCAGGCTTCGCCATGCC  705270

c16f0001   705271  TTAACGGGCGTCAATGCGCGCTTCGGAAATCCACAGCGCTTCACCGAGTGTTGATTACTC  705330

c16f0001   705331  CACTGCTACGCCGAAATGGTGCGCCTGGCACGACAACACAACGCAGACACCGCTGATGCC  705390

c16f0001   705391  TTCTCCGGACAGCAGCGAATCCATCGATCACCGACGATGGTAGCCGCGGTTTACGGAGCG  705450

c16f0001   705451  TGTTGCAAGCGGGATGGAATTATCTTGGAAGAGACGCTCTCCGTGAGGCCTCTATACGGG  705510

c16f0001   705511  TTCTTCGCTGCATCATCATCGGTTCAATGCGACGAATCGATACGTTCTGGCGATCGAACG  705570

c16f0001   705571  AGGTTCGCATGGGTACTGATTGAAGCCAGGACACGTGAAGAGATGCATGATGTGGAAACG  705630

c16f0001   705631  GATCTACCGACTGTGCCCTTGTACGGAATATCGCCTTATCGAATGGCATGGATACCAGCA  705690

c16f0001   705691  GCGCTCGATGAAAGCAGGTCTCCAGGTAATGGACAGCGACGAGGTCGGTTTCGCCCGAGT  705750

c16f0001   705751  CAGCGCTCACTGGGGGTAGAGGCGGCAGCTGTCGCGAACGAGAACCTGTCTTAAGCTCTC  705810

c16f0001   705811  CGTTGCGGTTGCTGAACACGATGGAAGCTCGAATGTTTTGTGCTTATCGAAACGCCTATC  705870
sz70b02    233           ......................................................  180

c16f0001   705871  GCGTACGCTCGTCCAAGTTGGAGTCTGCCTTGCCGATCACGCCGCCAACGCCATTTTTCC  705930
sz70b02    179     ............................................................  120

c16f0001   705931  TAGCAATGACTCCTGCCTTGACGCTATGAGCGTCATCGTCGTTTGGCACTGTCAACAGCG  705990
sz70b02    119     ............................................................  60

c16f0001   705991  TGTTTTGTACAACATCGTATCCGCTCAAGCCCCCAGTGCATACCTGGACGGTTCCTTCT  706049
sz70b02    59      ...........................................................  1