Cyanidioschyzon merolae Genome Project

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c18f0001   405682  TGAATCCTTCATCATTTATGACTGCACTTGGAATGTCGAAGATGTACCTCTAAAACGATT  405741
rsz27i19   1       .........-N.-N..............................................  58

c18f0001   405742  CCGAAACATCGAAAGGCATGAGCAGCTTGAGCAGATCGGTGTTCCAGTGTATCGTCTGAC  405801
rsz27i19   59      ............................................................  118

c18f0001   405802  ACGGGTATTGCACATGCATCATGAACGCAAGCGAGTACGTGGGCGAGTGCAGCTATGTTC  405861
rsz27i19   119     ..........................A................................G  178

c18f0001   405862  GTGTTCTGCGCGACTTTGAGACTCGTATTTGTGCCACCGCAAGGTTGTCGCACTGGTCGG  405921
rsz27i19   179     ............................................................  238

c18f0001   405922  GGCTCACCCTCGAGTCCAAGTCCCTGTGCAGTGGTGATGATCGCGACGCGACGTGTTCAT  405981
rsz27i19   239     ............................................................  298

c18f0001   405982  GAATCGACCTTCACGACACAATGCTGCTGCAACCGAGAACAGTGATCCTCGCACGCGTTG  406041
rsz27i19   299     ............................................................  358

c18f0001   406042  CGTACATTGCGTGTTTACTACAGACAGCTTGGCTACGACGCTCGACTTGCTAACGCATCA  406101
rsz27i19   359     ............................................................  418

c18f0001   406102  TCTTTTTTCATGATGCTATGTTCGCGAAGATTGTGTTTCGAAACAGTCCCTTGTGTAGCA  406161
rsz27i19   419     ............................................................  478

c18f0001   406162  CTGCGGCTCGCAAGTCGCCCGCTTCTGACGCTTGGGTCGGTTTTGAGCAGCGAGCTCAAA  406221
rsz27i19   479     ............................................................  538

c18f0001   406222  ACGGAAACGCCATTCGATGCTTACGGAATCCGGACGATGTGTCTCACACCTACCAATGGA  406281
rsz27i19   539     ............................................................  598

c18f0001   406282  GCAGACAAATATCAGACACATCCAATGCAGCGAATGAACACTAGTTACTTCCACAAGGCA  406341
rsz27i19   599     ............................................................  658

c18f0001   406342  CGTTGCACAAGCAAGACTACTTGGGCTGGGAATTTCCAACCCATGTGACCCAAGCCCGAA  406401
rsz27i19   659     ............................................................  718

c18f0001   406402  ATACGTCAGCGCTCGATAGCACCGTTGCAGCGACCAGCTTCGTAGGGAGAACGCTGCACC  406461
rsz27i19   719     ...................................                           753

c18f0001   406462  ACCGGCTGCTTCAGACAACGTACCCTGCCGATGAGGCAGGGTTCGATACCCGCTACCTAT  406521

c18f0001   406522  GCCGGCAGCACCACTGGCGCCACCACTACCGCGTTGCTCATGCTGCGCGTGCCCAGCGCG  406581

c18f0001   406582  GTGTTCTCTCTGGATGGCGTCGGAGGCAGCGACAGCGTACCCAAATGACGTCTACATCAG  406641
sz27i19    561                           ......................................  524

c18f0001   406642  GTCTGCGTCCTGCGCATATTGTTCGCGTGCGCTCTGGTTAGCTTCAGCGGTACCTGGTAA  406701
sz27i19    523     ............................................................  464

c18f0001   406702  GCAGTGCTTGTCTCCGCAGCACCAGTTCCGGCGAGGACAAGAGCAGCGGTCCATAGCGCC  406761
sz27i19    463     ............................................................  404

c18f0001   406762  TGCCAGAGGCAGTAGGCCTTGGCGCATCGCAACCGGCTCATGGAACGTCCAATGGCAACT  406821
sz27i19    403     ............................................................  344

c18f0001   406822  GCGCACGTACCCAAAAACACATCCACAAACACAGACATACATAGCGCGTCGATTTACAGT  406881
rsz5m22    1                                                 ..................  18
rsz20j16   1                                                 ..................  18
rsz93e17   1                                              .....................  21
rsz21f20   1                                                  ........N........  17
rsz82i09   1                                                 ..............-...  17
rsz27a19   1                                                   ............-N..  15
rsz99n04   1                                                 ..................  18
rsz54p24   1                                                ...................  19
sz27i19    343     ............................................................  284
rsz38p13   1                                                 ..................  18

c18f0001   406882  GCGCTTGTGTTCAGCGAGGAAATATAATCCTTCAAG-CCGACTAG-ACCACTAGTATGAC  406939
rsz5m22    19      ............N.......................-........-..............  76
rsz20j16   19      ...........-N.......................-........-..............  75
rsz93e17   22      ............-.......................-........-..............  78
rsz21f20   18      ...................N..............-.-........N..............  75
rsz82i09   18      ...........-N.......................N........-..............  75
rsz27a19   16      ...........-N...................-...-........-..............  71
rsz99n04   19      ....................................-........-..............  76
rsz54p24   20      ....................................-........-..............  77
rsz16b20   1                          ..............-..-........-..............  38
rsz79h02   1                               ............N........-..............  35
sz27i19    283     ....................................-........-..............  226
rsz38p13   19      ....................................-........-..............  76
rsz35l09   1                                                            .......  7
rsz52i16   3       ...........-N.......................-........-..............  59

c18f0001   406940  GCAGTTTTCGAAACGCAGCATTCTCTATCGCTCTAACCTCTTCACGCGGTAAACGCACCA  406999
rsz5m22    77      ............................................................  136
rsz20j16   76      ............................................................  135
rsz93e17   79      ............................................................  138
rsz21f20   76      ............................................................  135
rsz82i09   76      .....C......................................................  135
rsz27a19   72      ............................................................  131
rsz99n04   77      ............................................................  136
rsz54p24   78      ............................................................  137
rsz16b20   39      ............................................................  98
rsz79h02   36      ............................................................  95
sz27i19    225     ............................................................  166
rsz38p13   77      ............................................................  136
rsz35l09   8       ............................................................  67
rsz52i16   60      ............................................................  119
rsz51c21   1                        ...........................................  43

c18f0001   407000  GCGCACCTACTTCATCAATTGTCTTGGCAATGCCCGAGTCCAGACCGTATCGCAAACGCA  407059
rsz5m22    137     ............................................................  196
rsz20j16   136     ............................................................  195
rsz93e17   139     ....................................G.......................  198
rsz21f20   136     ............................................................  195
rsz82i09   136     ............................................................  195
rsz27a19   132     ............................................................  191
rsz99n04   137     ............................................................  196
rsz54p24   138     ............................................................  197
rsz16b20   99      .....................C......................................  158
rsz79h02   96      ............................................................  155
sz27i19    165     .........................................                     125
rsz38p13   137     ............................................................  196
rsz35l09   68      ............................................................  127
rsz52i16   120     ............................................................  179
rsz51c21   44      ............N...............................................  103

c18f0001   407060  CAACCCTCATTTCCACATGATTCAGCAACTGGAGGGAACGCTCGAGATCTTCACGAAGCA  407119
rsz5m22    197     ............................................................  256
rsz20j16   196     ............................................................  255
rsz93e17   199     ............................................................  258
rsz21f20   196     ............................................................  255
rsz82i09   196     ............................................................  255
rsz27a19   192     ............................................................  251
rsz99n04   197     ............................................................  256
rsz54p24   198     ............................................................  257
sz54p24    661                                                          .......  655
rsz16b20   159     ............................................................  218
rsz79h02   156     ............................................................  215
rsz35l09   128     ............................................................  187
rsz52i16   180     ...................................................N........  239
rsz51c21   104     ........................A...............                      143

c18f0001   407120  TGCTCAGCTCAATTTGCTCCTCAGGCGAAGCGCTTTCATGCACGATCGAATCCGCAAGGG  407179
rsz5m22    257     ............................................................  316
rsz20j16   256     ............................................................  315
rsz93e17   259     ............................................................  318
rsz21f20   256     ............................................................  315
rsz82i09   256     ............................................................  315
rsz27a19   252     ............................................................  311
rsz99n04   257     ............................................................  316
rsz54p24   258     ............................................................  317
sz54p24    654     ............................................................  595
rsz16b20   219     ............................................................  278
rsz79h02   216     ............................................................  275
rsz35l09   188     ............................................................  247
rsz52i16   240     ............................................................  299

c18f0001   407180  TTGTGCGGTCTCGTTCCGAGCCAGACTGGTTGTTCCCAAACCGAACCGAGGATTCCAGCG  407239
rsz5m22    317     ............................................................  376
rsz20j16   316     ............................................................  375
rsz93e17   319     ............................................................  378
rsz21f20   316     ............................................................  375
rsz82i09   316     ............................................................  375
rsz27a19   312     ......................G.....................................  371
rsz99n04   317     ............................................................  376
rsz54p24   318     ............................................................  377
sz54p24    594     ............................................................  535
rsz16b20   279     ............................................................  338
rsz79h02   276     ............................................................  335
rsz35l09   248     ................................N...........................  307
rsz52i16   300     ......................                                        321

c18f0001   407240  AGATGGTCTGCACTGCAAGCGAACGCAATTCACGCAAGCGCTTCCGGGATATTCCCAACC  407299
rsz5m22    377     ............................................................  436
rsz20j16   376     ............................................................  435
rsz93e17   379     ............................................................  438
rsz21f20   376     ............................................................  435
rsz82i09   376     ............................................................  435
rsz27a19   372     ............................................................  431
rsz99n04   377     ............................................................  436
rsz54p24   378     ............................................................  437
sz54p24    534     ............................................................  475
rsz16b20   339     ............................................................  398
rsz79h02   336     ............................................................  395
rsz38p13   200               ...-..............................................  248
rsz35l09   308     .................................                             340

c18f0001   407300  GTTCACAGATATCCGCTTCGGTTGGTTCGCAGCCCCGTTCGATGCTCAGGTCGCGCGCGG  407359
rsz5m22    437     ............................................................  496
rsz20j16   436     ............................................................  495
rsz93e17   439     ............................................................  498
rsz21f20   436     ............................................................  495
rsz82i09   436     ............................................................  495
rsz27a19   432     ............................................................  491
rsz99n04   437     ............................................................  496
rsz54p24   438     ............................................................  497
sz54p24    474     ............................................................  415
rsz16b20   399     ............................................................  458
rsz79h02   396     ................................................A...........  455
rsz38p13   249     ............................................................  308

c18f0001   407360  CTTTGCGAACGGCGAGTATGCGATCATGCATATGAACAGGAAGCCGAACGATACGACCTT  407419
rsz5m22    497     ............................................................  556
rsz20j16   496     ............................................................  555
rsz93e17   499     ............................................................  558
rsz21f20   496     ............................................................  555
rsz82i09   496     ............................................................  555
rsz27a19   492     ............................................................  551
rsz99n04   497     ............................................................  556
rsz54p24   498     ............................................................  557
sz54p24    414     ............................................................  355
rsz16b20   459     ............................................................  518
rsz79h02   456     ............................................................  515
rsz38p13   309     ............................................................  368

c18f0001   407420  GGTCCGCAAGCGCGCGCATGACGCTCTGTTTCACCCACCAGGTCGC-GTAGGTGCTGAAA  407478
rsz5m22    557     ..............................................-.............  615
rsz20j16   556     ..............................................-.............  614
rsz93e17   559     ..............................................-.............  617
rsz21f20   556     ..............................................-.............  614
rsz82i09   556     ..............................................-.............  614
rsz27a19   552     ..............................................-.............  610
rsz99n04   557     ..............................................-.............  615
rsz54p24   558     ..............................................-.............  616
sz54p24    354     ..............................................-.............  296
rsz16b20   519     ........................................N.....G.............  578
rsz79h02   516     ........................................N.....-...N.........  574
rsz38p13   369     ..............................................-A............  427

c18f0001   407479  CGACATCCGCGTCGGTCGTCGAACTTTTCTGCCGCCCGAATGAGGCCGAGCGAGCCCTCC  407538
rsz5m22    616     ............................................................  675
rsz20j16   615     ............................................................  674
rsz93e17   618     ...........................................N................  677
rsz21f20   615     ............................................................  674
rsz82i09   615     ..........................................................    672
rsz27a19   611     ............................................................  670
rsz99n04   616     ..................................                            649
rsz54p24   617     ..........................                                    642
sz54p24    295     ............................................................  236
rsz16b20   579     ............................................................  638
rsz79h02   575     ...............................                               605
rsz38p13   428     ...............C......................................A.....  487

c18f0001   407539  TGGATGAGATCCTCCAGGGGCAGACCTTTGCGCATGTATCGCTTGGCAATGGACACCACG  407598
rsz5m22    676     ............................................................  735
rsz20j16   675     ............................................................  734
rsz93e17   678     .....                                                         682
rsz21f20   675     ....                                                          678
rsz27a19   671     .                                                             671
sz54p24    235     ............................................................  176
rsz16b20   639     ..                                                            640
rsz38p13   488     ............................................................  547

c18f0001   407599  AGTCGGAGGTTCGCTGCTACCATACGGTCCTTCGCTCGCCGTGCTTCGGCAAGGTTCCTG  407658
rsz5m22    736     .                                                             736
rsz20j16   735     ..                                                            736
sz54p24    175     ............................................................  116
rsz38p13   548     ............................................................  607

c18f0001   407659  CGAAAGCGCTCTGGGTCGACACCGAGATGCTCTGCGAGTTCATCATCCGTTGGTGCTCGA  407718
sz54p24    115     ............................................................  56
rsz38p13   608     ............                                                  619

c18f0001   407719  T-CCAGTGCCCCGTGGAGCTCGATTCGCTTGCGCTCCCAATGCAAAAGCCGTGAAATCTG  407777
sz54p24    55      .N.....................................                       17

c18f0001   407778  ACGTGAAAGCGATACTTCCTCCTCAGGGGTGAGCATATCCACACGTCCGATCATGCGCAA  407837

c18f0001   407838  GTACCAGCGCAGGGTACTGCTCTCGCTGGAACGCGCACGAGGGGTTTCGGGATATGTCTC  407897

c18f0001   407898  CCACGCCAGCGGCTCATTGTCGGAAGGATCATCTTCACTGTAGTCGAGTTCCCGAATGCT  407957
rsz35l09   336                                      ...........................  362

c18f0001   407958  CGGTCCGTCATCATCCGCTGCACGTTCGCTGTCCTGGATGCGTTCCCACCGGGCATTCAC  408017
rsz35l09   363     ............................................................  422
rsz89p07   642                                                 ................  657

c18f0001   408018  TACGGCGGATGGATTCGTAGAGAGGGATCGACGTGATCCTTGTGGCAACTTGTGAACTGC  408077
rsz35l09   423     ............................................................  482
rsz89p07   658     ................N..N................                          693

c18f0001   408078  ATCATTCAGAGATGTTGGGCTGAGTCGTTGGTCGGCATTGGACAACTGACGTTGCCGAGC  408137
rsz35l09   483     ........N...................................................  542

c18f0001   408138  TGGCCGGACACTCTTACTTGAACGTGTTTTCGCGCTCGGAGAGGTAGTTTCACGCATATG  408197
rsz35l09   543     ...............................................N.N..........  602

c18f0001   408198  AGCTTGCCCAGGCCCGCCAGGGTGCTTCGCCTCCCAGTTTGGTACCGGCAGGCGATTATC  408257
rsz35l09   603     ....                                                          606
sz16b20    339                                               ..................  322

c18f0001   408258  CACGGAAACGAAAGTTTCCTCCAAAGGGGTTTGGAGCGGCGAATCAGGTACTGCCGACGT  408317
sz20j16    654                                            .....................  634
sz16b20    321     ............................................................  262

c18f0001   408318  AGACTGGCCAACACGAAGCGTTGCAGCTCTCGCCTGACGACGACGCGAGCTGCCGGTTCG  408377
sz20j16    633     ............................................................  574
sz16b20    261     ............................................................  202

c18f0001   408378  CTCGGGCGTACGCTGCGCACCGGAACTCGCATCCGGAGTCGTACCGCTGTCCACTGACTT  408437
sz20j16    573     ............................................................  514
sz77b09    624      ...........................................................  566
sz38p13    609          .......................................................  555
sz52i16    599                           ......................................  562
sz27a19    593                                  ...............................  563
sz5m22     601                                           ......................  580
sz79h02    572                           ......................................  535
sz16b20    201     ............................................................  142

c18f0001   408438  GGGCACATGTTCACGCTGCTCGTCGCGTGCCACGGGACCTAGCGGTGCTGGGGCACAAAC  408497
sz20j16    513     ............................................................  454
sz77b09    565     ............................................................  506
sz38p13    554     ............................................................  495
sz52i16    561     ............................................................  502
sz27a19    562     ............................................................  503
sz5m22     579     ............................................................  520
sz79h02    534     ............................................................  475
sz93e17    541                             ....................................  506
sz99n04    516                                                   ..............  503
sz21f20    518                                                   ..............  505
sz16b20    141     ........                                                      134

c18f0001   408498  ACTGTTCGCCTCCGGCTCAAGTTTTCTAGCTCCATCAACAAAACCATGCTTTTCGAGAGC  408557
sz20j16    453     .............................................G..............  394
sz77b09    505     .............................................T..............  446
sz38p13    494     ............................................................  435
sz52i16    501     ............................................................  442
sz27a19    502     .............A..............................................  443
sz5m22     519     ............................................................  460
sz79h02    474     ............................................................  415
sz93e17    505     ............................................................  446
sz99n04    502     ............................................................  443
sz21f20    504     ............................................................  445

c18f0001   408558  GTACTCAGCGCCTAGGTCTCGTGATCTGTTCGTGTTCGCGCAGCAGCGACAGCTGCGCAA  408617
sz20j16    393     ............................................................  334
sz77b09    445     ............................................................  386
sz38p13    434     ............................................................  375
sz52i16    441     ............................................................  382
sz27a19    442     ............................................................  383
sz5m22     459     ............................................................  400
sz79h02    414     .............G..............................................  355
sz93e17    445     ............................................................  386
sz99n04    442     ............................................................  383
sz21f20    444     .............................A..............................  385
sz51c21    357                                            .....................  337

c18f0001   408618  GAGGCGCGGCTCGGCCACAACTAGCCTCACACCGCGACCAGGGCAAGTCTTGCCGTGCTG  408677
sz20j16    333     ............................................................  274
sz77b09    385     ............................................................  326
sz38p13    374     ............................................................  315
sz52i16    381     ............................................................  322
sz27a19    382     ............................................................  323
sz5m22     399     ............................................................  340
sz79h02    354     ............................................................  295
sz93e17    385     ............................................................  326
sz99n04    382     ............................................................  323
sz21f20    384     ............................................................  325
sz51c21    336     ...................................................N........  277
sz82i09    116                                                           ......  111

c18f0001   408678  CAACCGCTGCCCGGCACGCGGCAGATCCAGTTGCTTTAGCGGGCGCACCCTCCATAGACC  408737
sz20j16    273     ............................................................  214
sz77b09    325     ............................................................  266
sz38p13    314     ............................................................  255
sz52i16    321     ............................................................  262
sz27a19    322     ............................................................  263
sz5m22     339     ............................................................  280
sz79h02    294     ............................................................  235
sz93e17    325     ............................................................  266
sz99n04    322     ............................................................  263
sz21f20    324     ............................................................  265
sz51c21    276     ............................................................  217
sz82i09    110     ............................................................  51

c18f0001   408738  GAGCGTCGCCGTGACGAAACCTACACCGTCGCTGCTTAGCCTGCAGCAGCGCGCCTCAGC  408797
sz20j16    213     ............................................................  154
sz77b09    265     ............................................................  206
sz38p13    254     ............................................................  195
sz52i16    261     ............................................................  202
sz27a19    262     ............................................................  203
sz5m22     279     ............................................................  220
sz79h02    234     ............................................................  175
sz93e17    265     ............................................................  206
sz99n04    262     ............................................................  203
sz21f20    264     ............................................................  205
sz51c21    216     ...........................................................T  157
sz82i09    50      ...G..............................................            1

c18f0001   408798  GCTCGCGGTACGTCCCTGCGTGAACATTGCCCAAGCCACGTCTGTCTCGATGCCCTCCCA  408857
sz20j16    153     ............................................................  94
sz77b09    205     ............................................................  146
sz38p13    194     ............................................................  135
sz52i16    201     ............................................................  142
sz27a19    202     ............................................................  143
sz5m22     219     ............................................................  160
sz79h02    174     ............................................................  115
sz93e17    205     ............................................................  146
sz99n04    202     ............................................................  143
sz21f20    204     ............................................................  145
sz51c21    156     ............................................................  97
sz16b20    138                                         ...A....................  115

c18f0001   408858  AATTCAAGAAATAGGAGTCCAGCTCGAAGAACCAAGCTTCACCAAGTAGCCTTTTTGAGC  408917
sz20j16    93      ............................................................  34
sz77b09    145     ............................................................  86
sz38p13    134     ............................................................  75
sz52i16    141     ............................................................  82
sz27a19    142     ............................................................  83
sz5m22     159     ............................................................  100
sz79h02    114     ............................................................  55
sz93e17    145     ............................................................  86
sz99n04    142     ............................................................  83
sz21f20    144     ............................................................  85
sz27i19    130                   ......G.......................................  85
sz51c21    96      ............................................................  37
sz16b20    114     ............................................................  55

c18f0001   408918  AGAGCACGTCCCTGGTTCGACAAATGGGAGTACCACGAACGACAACCGCCTTTCAAAAGA  408977
sz20j16    33      .................................                             1
sz77b09    85      ............................................................  26
sz38p13    74      ............................................................  15
sz52i16    81      ............................................................  22
sz27a19    82      ............................................................  23
sz5m22     99      ............................................................  40
sz79h02    54      .....................................................         2
sz93e17    85      ............................................................  26
sz99n04    82      ............................................................  23
sz21f20    84      ............................................................  25
sz27i19    84      ............................................................  25
sz51c21    36      ....................................                          1
sz16b20    54      ......................................................        1

c18f0001   408978  AAAACGCTGTCACTGGCCGTATACAGTCGTGGCGGCGAATGCGCGTAGACAAAACGCCTC  409037
sz77b09    25      .......................                                       3
sz38p13    14      ..............                                                1
sz52i16    21      .............-........                                        1
sz27a19    22      ......................                                        1
sz5m22     39      ......................C....                                   13
sz93e17    25      .......................                                       3
sz99n04    22      ......................                                        1
sz21f20    24      ........................                                      1
sz27i19    24      ........................                                      1
rsz70m14   125                                                  .......G.A.T...  111

c18f0001   409038  CAACTGACGCGCAGACGCTTCCGAGGCTTTCTCGACCGGCCACCCACGACTGCTTCCAAT  409097
rsz70m14   110     ..G......T...A....A..TC..T..................................  51

c18f0001   409098  TGTTT  409102
rsz70m14   50      .T...  46