Cyanidioschyzon merolae Genome Project

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CMD105C (315 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)


putative peroxisome assembly protein 2 [Oryza sativa (japonica cultivar-group)]

putative RING finger protein [Arabidopsis thaliana]

unknown protein [Arabidopsis thaliana]

Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]

Peroxisomal membrane protein 3 [Rattus norvegicus]

peroxisomal membrane protein 3 [Rattus norvegicus]

PREDICTED: similar to Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) (RING finger protein 72) [Bos taurus]

hypothetical protein LOC549595 [Xenopus tropicalis]

Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3)

PREDICTED: similar to Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) [Canis familiaris]

peroxisomal membrane protein 3 [Mus musculus]

F20B17.23 [Arabidopsis thaliana]

Peroxisomal membrane protein 3 [Homo sapiens]

similar to Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) [Gallus gallus]

similar to Rattus norvegicus (Rat). Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) [Dictyostelium discoideum]

PXMP3 protein [Homo sapiens]

peroxisome assembly factor-1 [Cricetulus griseus]

hypothetical protein FG00724.1 [Gibberella zeae PH-1]

peroxisome assembly factor [Podospora anserina]

hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]

unnamed protein product [Tetraodon nigroviridis]

LD46714p [Drosophila melanogaster]

CG7081-PA [Drosophila melanogaster]

GA20087-PA [Drosophila pseudoobscura]

hypothetical protein [Neurospora crassa]

Pay5p

YlPEX2 [Yarrowia lipolytica CLIB99]

ENSANGP00000023268 [Anopheles gambiae str. PEST]

hypothetical protein MG00655.4 [Magnaporthe grisea 70-15]

hypothetical protein UM00325.1 [Ustilago maydis 521]

peroxisome protein Pex2 [Paracoccidioides brasiliensis]

unnamed protein product [Debaryomyces hansenii CBS767]

peroxisome assembly protein, putative [Cryptococcus neoformans var. neoformans JEC21]

hypothetical protein CNBA1530 [Cryptococcus neoformans var. neoformans B-3501A]

likely peroxisomal import RING finger complex component Pex2 [Candida albicans SC5314]

peroxin-2 [Trypanosoma brucei]

peroxin-2 [Trypanosoma brucei]

Hypothetical protein CBG06104 [Caenorhabditis briggsae]

Hypothetical protein ZK809.7 [Caenorhabditis elegans]

peroxin-2 [Pichia pastoris]
 
gb|AAT85132.1| putative peroxisome assembly protein 2 [Oryza sativa (japonica cultivar-group)]
(342 aa)

Score: 115 bits (289), Expect: 1.09656e-24
Length: 284, Idn/Pos/Gap = 85/133/24 (29%/46%/8%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDV  88
            DA  L+VE+ + L E L    S + P LL   E EL A L  L + FS+ V +P PG+ 
Sbjct:  56 FDAARLDVEMSAMLKEQLVKVFSLVKPGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNA 115

Query:  89 YQNLTYRVD-----VGNTVSEG-DSVIMTRGRRFLYGCAYVLGHYLLERYQTM----RYT 138
             NL YR +      G  V  G +   ++  ++ LY  + V G Y+  R Q+     R+ 
Sbjct: 116 LMNLRYRDERAAPITGKEVRTGLEGPGLSVSQKVLYCISTVGGQYIWSRLQSFSAFRRWG 175

Query: 139 GSPWVPSASSA----EMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATR 194
            S   P A  A    +  + L ++    N  LF    +Y+  +ERI + RL        R
Sbjct: 176 DSEQRPLARRAWGLVQHAEGLYRASSFFNLLLFLYGARYKTIVERILKARLVYESPNMNR 235

Query: 195 ALSFEMLNRQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGK 254
           A+SFE +NRQLVW  F+E+ + ++P+L S  + + L            S++  +     +
Sbjct: 236 AVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKKFLL---------PFSKDKSASSSGDE 286

Query: 255 IRCRLCGKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYC 298
             C +C +S P +P   +PC+H +CY C+  +     S  C  C
Sbjct: 287 ADCPIC-RSSPSIPFEALPCQHRYCYYCLQTRCAATNSYRCARC 329



gb|AAM61388.1| putative RING finger protein [Arabidopsis thaliana]
(333 aa)

Score: 115 bits (288), Expect: 1.55677e-24
Length: 314, Idn/Pos/Gap = 93/145/31 (29%/46%/9%)

Query:   4 ERVLLSLQRLLAPGQHQSETQL--VACLDARELNVEVFSTLWESLAATVSSINPRLLQVL  61
           +R+L   Q LLA  +      +  V   DA  L+VE+ + L E L    + + P +L   
Sbjct:  16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY  75

Query:  62 EAELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDVG---------NTVSEGDSVIMTR 112
           E EL A L  L + FS+ V +P PG+   NL YR + G          T  EG    +T 
Sbjct:  76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPG--LTS 133

Query: 113 GRRFLYGCAYVLGHYLLERYQTM----RYTGSPWVPSA----SSAEMIDNLLKSMESLNF 164
            ++  Y  A V G YL  R Q+     R+  S   P A    +  + I+ + K+   LN 
Sbjct: 134 PQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNL 193

Query: 165 FLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQSP 224
             F    +YRN +E+  + RL        R++SFE +NRQLVW  F+E+ + ++P+L S 
Sbjct: 194 LSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSS 253

Query: 225 LLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKSRPLMPHILIPCRHLFCYVCMA 284
            +  IL            +++  S      + C +C +  P +P I +PC+H +CY C+ 
Sbjct: 254 AVKNIL---------SPFAKDKSSSTKEDTVTCPIC-QVDPAIPXIALPCQHRYCYYCIR 303

Query: 285 MKIRTNGSEGCPYC 298
            +  +  S  C  C
Sbjct: 304 TRCASAASFRCLRC 317



gb|AAM20014.1| unknown protein [Arabidopsis thaliana]
gb|AAL36419.1| unknown protein [Arabidopsis thaliana]
ref|NP_565222.1| Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]
sp|Q9CA86|PEX2_ARATH Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2) (Pex2p)
gb|AAG52254.1| putative RING finger protein; 84236-82024 [Arabidopsis thaliana]
(333 aa)

Score: 115 bits (288), Expect: 1.74967e-24
Length: 314, Idn/Pos/Gap = 93/145/31 (29%/46%/9%)

Query:   4 ERVLLSLQRLLAPGQHQSETQL--VACLDARELNVEVFSTLWESLAATVSSINPRLLQVL  61
           +R+L   Q LLA  +      +  V   DA  L+VE+ + L E L    + + P +L   
Sbjct:  16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY  75

Query:  62 EAELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDVG---------NTVSEGDSVIMTR 112
           E EL A L  L + FS+ V +P PG+   NL YR + G          T  EG    +T 
Sbjct:  76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPG--LTS 133

Query: 113 GRRFLYGCAYVLGHYLLERYQTM----RYTGSPWVPSA----SSAEMIDNLLKSMESLNF 164
            ++  Y  A V G YL  R Q+     R+  S   P A    +  + I+ + K+   LN 
Sbjct: 134 PQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNL 193

Query: 165 FLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQSP 224
             F    +YRN +E+  + RL        R++SFE +NRQLVW  F+E+ + ++P+L S 
Sbjct: 194 LSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSS 253

Query: 225 LLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKSRPLMPHILIPCRHLFCYVCMA 284
            +  IL            +++  S      + C +C +  P +P I +PC+H +CY C+ 
Sbjct: 254 AVKNIL---------SPFAKDKSSSTKEDTVTCPIC-QVDPAIPFIALPCQHRYCYYCIR 303

Query: 285 MKIRTNGSEGCPYC 298
            +  +  S  C  C
Sbjct: 304 TRCASAASFRCLRC 317



ref|NP_974183.1| Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]
(282 aa)

Score: 106 bits (265), Expect: 6.99411e-22
Length: 276, Idn/Pos/Gap = 81/127/29 (29%/46%/10%)

Query:  40 STLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDVG  99
           + L E L    + + P +L   E EL A L  L + FS+ V +P PG+   NL YR + G
Sbjct:   3 AMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERG  62

Query: 100 ---------NTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQTM----RYTGSPWVPSA 146
                     T  EG    +T  ++  Y  A V G YL  R Q+     R+  S   P A
Sbjct:  63 VVAQHLGKVRTGLEGPG--LTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA 120

Query: 147 ----SSAEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLN 202
               +  + I+ + K+   LN   F    +YRN +E+  + RL        R++SFE +N
Sbjct: 121 RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN 180

Query: 203 RQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGK 262
           RQLVW  F+E+ + ++P+L S  +  IL            +++  S      + C +C +
Sbjct: 181 RQLVWNEFSEMLLLLLPLLNSSAVKNIL---------SPFAKDKSSSTKEDTVTCPIC-Q 230

Query: 263 SRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYC 298
             P +P I +PC+H +CY C+  +  +  S  C  C
Sbjct: 231 VDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 266



gb|AAH63169.1| Peroxisomal membrane protein 3 [Rattus norvegicus]
emb|CAA41054.1| peroxisome assembly factor-1 [Rattus rattus]
dbj|BAA06306.1| peroxisome assembly factor-1 [Rattus norvegicus]
sp|P24392|PEX2_RAT Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3)
prf||1706355A peroxisome assembly factor 1
(305 aa)

Score: 100 bits (250), Expect: 3.74292e-20
Length: 279, Idn/Pos/Gap = 79/122/12 (28%/43%/4%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++A L L  + F++       
Sbjct:  17 ISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKNATV  76

Query:  86 GDVYQNLTYRVDVG-NTVSEGDSVIMTRGRRFLYGCAYVLGHYLLER-YQTMRYTG-SPW 142
           G    N+ Y+ D   N V +  S    + ++ LY    + G +L ER Y   R    + +
Sbjct:  77 GQSVLNIQYKNDSSPNPVYQPPS----KNQKLLYAVCTIGGRWLEERCYDLFRNRHLASF 132

Query: 143 VPSASSAEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLN 202
             +      +  LLK  E +NF +F    K+    ER+  +     +  + R + FE +N
Sbjct: 133 GKAKQCMNFVVGLLKLGELMNFLIFLQKGKFATLTERLLGIHSVFCKPQSMREVGFEYMN 192

Query: 203 RQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGK 262
           R+L+W GF E  + ++P++    L   L          A S   +    SGK  C LCG+
Sbjct: 193 RELLWHGFAEFLVFLLPLINIQKLKAKLSSWCIPLTSTAGSDSTLGS--SGK-ECALCGE 249

Query: 263 SRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
             P MPH  I C H+FCY C+      +    CP CG+E
Sbjct: 250 -WPTMPHT-IGCEHVFCYYCVKSSFLFDMYFTCPKCGTE 286



ref|NP_058930.1| peroxisomal membrane protein 3 [Rattus norvegicus]
dbj|BAA06307.1| peroxisome assembly factor-1 [Rattus norvegicus]
(305 aa)

Score: 100 bits (250), Expect: 4.06862e-20
Length: 280, Idn/Pos/Gap = 79/123/14 (28%/43%/5%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++A L L  + F++       
Sbjct:  17 ISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKNATV  76

Query:  86 GDVYQNLTYRVDVG-NTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQTM---RYTGSP 141
           G    N+ Y+ D   N V +  S    + ++ LY    + G +L ER   +   R+  S 
Sbjct:  77 GQSVLNIQYKNDSSPNPVYQPPS----KNQKLLYAVCTIGGRWLEERCYDLFPNRHLAS- 131

Query: 142 WVPSASSAEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEML 201
           +  +      +  LLK  E +NF +F    K+    ER+  +     +  + R + FE +
Sbjct: 132 FGKAKQCMNFVVGLLKLGELMNFLIFLQKGKFATLTERLLGIHSVFCKPQSMREVGFEYM 191

Query: 202 NRQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCG 261
           NR+L+W GF E  + ++P++    L   L          A S   +    SGK  C LCG
Sbjct: 192 NRELLWHGFAEFLVFLLPLINIQKLKAKLSSWCIPLTSTAGSDSTLGS--SGK-ECALCG 248

Query: 262 KSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
           +  P MPH  I C H+FCY C+      +    CP CG+E
Sbjct: 249 E-WPTMPHT-IGCEHVFCYYCVKSSFLFDMYFTCPKCGTE 286



ref|XP_590234.1| PREDICTED: similar to Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) (RING finger protein 72) [Bos taurus]
(510 aa)

Score: 99 bits (246), Expect: 1.11663e-19
Length: 281, Idn/Pos/Gap = 78/125/16 (27%/44%/5%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++A L L  + F++       
Sbjct: 222 ISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKNATV 281

Query:  86 GDVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLER-YQTMRYTGSPWVP 144
           G    N+ Y+ D+   +S       +R ++  Y    + G +L ER Y   R   +  + 
Sbjct: 282 GQSVLNIQYQNDLSPNLSYQPP---SRNQKLWYAVCTIGGKWLEERCYDLFR---NRHIA 335

Query: 145 SASSAEMIDNLLKSMESL----NFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEM 200
           S   A++  NL+  +  L    NF +F    K+    ER+  +     +  + R + FE 
Sbjct: 336 SFRKAKLCMNLVVGLLKLGGLINFLIFLQRGKFATLTERLLGIHSVFHKPQSVREVGFEY 395

Query: 201 LNRQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLC 260
           +NR+L+W GF E  I ++P++    L   L            S   ++   SG+ +C LC
Sbjct: 396 MNRELLWHGFAEFLIFLLPLINVQKLRAKLSSWCVPLTGAPGSNSTLAT--SGR-QCSLC 452

Query: 261 GKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
           G+  P MPH  I C H+FCY C+      + S  CP CG+E
Sbjct: 453 GE-WPTMPHT-IGCEHVFCYYCVKSSFLFDMSFTCPKCGTE 491



ref|NP_001016841.1| hypothetical protein LOC549595 [Xenopus tropicalis]
(306 aa)

Score: 96 bits (239), Expect: 7.17763e-19
Length: 284, Idn/Pos/Gap = 76/125/21 (26%/44%/7%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W    +      P LL   E E++A L L  + +++       
Sbjct:  17 ISQLDAIELNKALEQLIWSQFNSCFQGFKPGLLTRFEPEIKAFLCLFLWRYTIYTKNATV  76

Query:  86 GDVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQTMRYTGSPWVPS 145
           G    N+ Y+ D+  T    +   + + ++  +    V G +L ER   + ++  P+  S
Sbjct:  77 GQAILNMQYKNDLEAT---KNYRPLNKQQKVWFALFMVGGKWLEERSFDL-FSNHPFGAS 132

Query: 146 ASSAE----MIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEML 201
               +     I  LLK    LNF +F    K+    ER+  +R   +     R + FE +
Sbjct: 133 FQRTKYFLNAISGLLKFGALLNFLIFLQQGKFATLTERLLGIRSVFSRPQDVRQVGFEYM 192

Query: 202 NRQLVWEGFTELAISVIPILQSPLLHRIL----RKAVFHGRFGAASREVVSQEHSGKIRC 257
           NR+++W GF E  I ++P++ +  L   L    + A  H      S  V+ +E      C
Sbjct: 193 NREILWHGFAEFLIFLLPLINTQKLKSKLFSWCKPAKGHS-LSDPSLAVICKE------C 245

Query: 258 RLCGKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
            LCG+  P MPH  I C H+FCY C+      +    CP C S+
Sbjct: 246 CLCGE-WPAMPHT-IGCSHVFCYYCIKSNYMADMYFTCPKCSSQ 287



sp|P55098|PEX2_MOUSE Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3)
gb|AAA21742.1| peroxisome assembly factor-1
(305 aa)

Score: 96 bits (239), Expect: 7.67309e-19
Length: 279, Idn/Pos/Gap = 78/120/12 (27%/43%/4%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++A L L  + F++       
Sbjct:  17 ISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKNATV  76

Query:  86 GDVYQNLTYRVDVG-NTVSEGDSVIMTRGRRFLYGCAYVLGHYLLER-YQTMRYTG-SPW 142
           G    N+ ++ D   N V +  S    + ++ LY    + G +L ER Y   R    + +
Sbjct:  77 GQSVLNIQHKNDSSPNPVYQPPS----KNQKLLYAVCTIGGRWLEERCYDLFRNRHLASF 132

Query: 143 VPSASSAEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLN 202
             +      +  LLK  E +NF +F    K+    ER+  +     +    R + FE +N
Sbjct: 133 GKAKQCMNFVVGLLKLGELMNFLIFLQKGKFATLTERLLGIHSVFCKPQNMREVGFEYMN 192

Query: 203 RQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGK 262
           R+L+W GF E  I ++P++    L   L          A     +    SGK  C LCG+
Sbjct: 193 RELLWHGFAEFLIFLLPLINIQKLKAKLSSWCTLCTGAAGHDSTLGS--SGK-ECALCGE 249

Query: 263 SRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
             P MPH  I C H+FCY C+      +    CP CG+E
Sbjct: 250 -WPTMPHT-IGCEHVFCYYCVKSSFLFDIYFTCPKCGTE 286



ref|XP_544136.1| PREDICTED: similar to Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) [Canis familiaris]
(328 aa)

Score: 96 bits (239), Expect: 8.13459e-19
Length: 280, Idn/Pos/Gap = 76/122/10 (27%/43%/3%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++ALL L  + F++       
Sbjct:  40 ISQLDALELNKALEQLVWAQFTQCFHGFKPGLLAHFEPEVKALLWLFLWRFTIYSKNATV  99

Query:  86 GDVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLER-YQTMRYTG-SPWV 143
           G    N+ Y+ D    +        ++ ++  Y    + G +L ER Y   R    + + 
Sbjct: 100 GQSVLNIQYKNDFSPKLRYQPP---SKNQKLWYAVCTIGGTWLEERCYDLFRNRHLASFG 156

Query: 144 PSASSAEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNR 203
            +     ++  LLK    +NF +F    K+    ER+  +R    +    R + FE +NR
Sbjct: 157 KARQCVNIMVGLLKLGGLINFLIFLQRGKFATLTERLLGIRSVFCKPQNVREVGFEYMNR 216

Query: 204 QLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKS 263
           +L+W GF E  I ++P++    L   L            S   ++   SGK +C LCG+ 
Sbjct: 217 ELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPLTGAPTSDNTLAT--SGK-QCSLCGE- 272

Query: 264 RPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSEFE 303
            P MPH  I C H+FCY C+      +    CP CG+E +
Sbjct: 273 WPTMPHT-IGCEHIFCYYCVKSSFLFDMYFTCPKCGTEVQ 311



ref|NP_033020.2| peroxisomal membrane protein 3 [Mus musculus]
gb|AAH12404.1| Peroxisomal membrane protein 3 [Mus musculus]
gb|AAB91465.1| peroxisome membrane protein PEX2 [Mus musculus]
(305 aa)

Score: 95 bits (237), Expect: 1.27648e-18
Length: 282, Idn/Pos/Gap = 82/124/18 (29%/43%/6%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++A L L  + F++       
Sbjct:  17 ISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKNATV  76

Query:  86 GDVYQNLTYRVDVG-NTVSEGDSVIMTRGRRFLYGCAYVLGHYLLER-YQTMRYTGSPWV 143
           G    N+ Y+ D   N + +  S    + ++  Y    + G +L ER Y   R   +  +
Sbjct:  77 GQSVLNIQYKNDSSLNLIYQPPS----KTQKLWYAVCTIGGKWLEERCYDLFR---NRHL 129

Query: 144 PSASSAEMIDN----LLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFE 199
            S   A+   N    LLK  E +NF +F    K+    ER+  +     +    R + FE
Sbjct: 130 ASFGKAKQFMNFLVGLLKLGELINFLIFLQKGKFATLTERLLGIHSVFCKPQNMREVGFE 189

Query: 200 MLNRQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRL 259
            +NR+L+W GF E  I ++P++    L   L         GAA  +  +   SGK  C L
Sbjct: 190 YMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCI-PLTGAAGHD-STLGSSGK-ECAL 246

Query: 260 CGKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
           CG+  P MPH  I C H+FCY C+      +    CP CG+E
Sbjct: 247 CGE-WPTMPHT-IGCEHVFCYYCVKSSFLFDIYFTCPKCGTE 286



gb|AAF68113.1| F20B17.23 [Arabidopsis thaliana]
(389 aa)

Score: 95 bits (237), Expect: 1.4109e-18
Length: 348, Idn/Pos/Gap = 94/144/59 (27%/41%/16%)

Query:   4 ERVLLSLQRLLAPGQHQSETQL--VACLDARELNVEVFSTLWESLAATVSSINPRLLQVL  61
           +R+L   Q LLA  +      +  V   DA  L+VE+ + L E L    + + P +L   
Sbjct:  16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY  75

Query:  62 EAELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDVGNTVS------EGDSVIMTRGRR 115
           E EL A L  L + FS+ V +P PG+   NL YR + G          EG    +T  ++
Sbjct:  76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKGLEGPG--LTSPQK 133

Query: 116 FLYGCAYVLGHYLLERYQTM----RYTGSPWVPSA----SSAEMIDNLLKSMESLNFFLF 167
             Y  A V G YL  R Q+     R+  S   P A    +  + I+ + K+   LN   F
Sbjct: 134 IWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSF 193

Query: 168 FLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVI-PILQSPLL 226
               +YRN +E+  + RL        R++SFE +NRQLVW    E ++ ++ P +   +L
Sbjct: 194 LYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVW---NEFSVGLLYPSIDQNIL 250

Query: 227 HRILRKAVFHGR-------------FG---------------AASREVVSQEHSGK---- 254
            R+  + V  G              FG               +A + ++S     K    
Sbjct: 251 FRLATRNVMLGSDFLVLFWHSALNLFGDIQEMLLLLLPLLNSSAVKNILSPFAKDKSSST 310

Query: 255 ----IRCRLCGKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYC 298
               + C +C +  P +P I +PC+H  C  C            C YC
Sbjct: 311 KEDTVTCPIC-QVDPAIPFIALPCQHSMCCSCYIHLKELTCRRYCYYC 357



gb|AAH00661.1| Peroxisomal membrane protein 3 [Homo sapiens]
(305 aa)

Score: 94 bits (233), Expect: 4.20914e-18
Length: 278, Idn/Pos/Gap = 74/117/10 (26%/42%/3%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++A L +  + F++       
Sbjct:  17 ISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLWVFLWRFTIYSKNATV  76

Query:  86 GDVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLER-YQTMR-YTGSPWV 143
           G    N+ Y+ D    +        ++ ++  Y    + G +L ER Y   R +  + + 
Sbjct:  77 GQSVLNIKYKNDFSPNLRYQPP---SKNQKIWYAVCTIGGRWLEERCYDLFRNHHLASFG 133

Query: 144 PSASSAEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNR 203
                   +  LLK    +NF +F    K+    ER+  +     +    R + FE +NR
Sbjct: 134 KVKQCVNFVIGLLKLGGLINFLIFLQRGKFATLTERLLGIHSVFCKPQNIREVGFEYMNR 193

Query: 204 QLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKS 263
           +L+W GF E  I ++P++    L   L            S   ++   SGK  C LCG+ 
Sbjct: 194 ELLWHGFAEFLIFLLPLINVQKLKAKLSSWCIPLTGAPNSDNTLAT--SGK-ECALCGE- 249

Query: 264 RPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
           RP MPH  I C H+FCY C       +    CP CG+E
Sbjct: 250 RPTMPHT-IGCEHIFCYFCAKSSFLFDVYFTCPKCGTE 286



ref|NP_001008454.1| similar to Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) [Gallus gallus]
emb|CAG31179.1| hypothetical protein [Gallus gallus]
(304 aa)

Score: 92 bits (229), Expect: 1.00243e-17
Length: 281, Idn/Pos/Gap = 76/126/16 (27%/44%/5%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W    +      P +L  +E E++A L LL + F++       
Sbjct:  17 ISQLDALELNKALEQLVWSQFTSCFHGFKPGVLAHIEPEVKAFLWLLLWRFTIYSKNATV  76

Query:  86 GDVYQNLTYRVDVGNTVSEGDSVI-MTRGRRFLYGCAYVLGHYLLERYQTMRYTGSPWVP 144
           G    N+ Y+    N +S+ +    +++ ++  Y    V G +L ER   +    +  + 
Sbjct:  77 GQAILNIQYK----NNLSQTEKYQPLSKHQKLWYLIFTVGGRWLEERCYDL--FSNRQLQ 130

Query: 145 SASSAEMIDN----LLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEM 200
           S S  +   N    LLK    +NF +F     +    ERI  +R    +  + R + FE 
Sbjct: 131 SVSKIKHYINFGAGLLKLCGLVNFLIFLQKGTFATLTERILGIRSVFCKPQSVRQVGFEY 190

Query: 201 LNRQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLC 260
           +NR+L+W GF E  I ++P++    L   +    F       S + ++  +     C LC
Sbjct: 191 MNRELLWHGFAEFLIYLLPLINVQKLKLKICSWCFPIANLPNSDKTLATHYK---VCSLC 247

Query: 261 GKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
           G+  P MPH  I C H+FCY C+      +    CP CGSE
Sbjct: 248 GE-WPTMPHT-IGCSHVFCYYCIKSNYLFDMYFTCPKCGSE 286



gb|AAS45382.1| similar to Rattus norvegicus (Rat). Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) [Dictyostelium discoideum]
gb|EAL71269.1| hypothetical protein DDB0168812 [Dictyostelium discoideum]
(423 aa)

Score: 92 bits (227), Expect: 2.03734e-17
Length: 305, Idn/Pos/Gap = 80/126/34 (26%/41%/11%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSV-GVGRPF  84
           V+ LD+  L+ E+   L        +   P  +   + E+  +L+ + +  S+  +G  +
Sbjct: 111 VSQLDSARLDEEILDLLRSQFMKIFTFFKPNFIHNFQPEINLVLKSVIYKLSIFNLGTTY 170

Query:  85 PGDVYQNLTYRVDVGNTVSEGDSVI--MTRGRRFLYGCAYVLGHYLLERYQTMRY-TGSP 141
            G+  QNLTYR +       G   +  +T  +++L G   + G +L  R    RY   + 
Sbjct: 171 -GNQLQNLTYRNEKAFDPIRGSDQLNKLTMRQKWLSGLINIGGEWLWTRIN--RYLINNN 227

Query: 142 WV--PSASSAEMIDNLLKSMES-------LNFFLFFLMRKYRNPLERIFRLRLRRAETGA 192
           W   P     +   N L   ES       LNF  F    KY   + RI  +RL  A    
Sbjct: 228 WSEHPPNDIRKKFWNFLNFAESAYKALALLNFLTFLFNGKYVTLVNRILHMRLVYAHPTL 287

Query: 193 TRALSFEMLNRQLVWEGFTELAISVIPILQ----SPLLHRILRKAVFHGRFGAASREVVS 248
           +R +SFE +NR LVW GFTE  + ++P++        L+R+L K  F    G  +    +
Sbjct: 288 SRNISFEYMNRLLVWHGFTEFILFIMPLINIDRIKSFLYRLLVKTSFGNSSGNNNNTASN 347

Query: 249 QEHSGKI-------------RCRLCGKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGC 295
                +              +C +C      MP+    C HLFCY C+      + S  C
Sbjct: 348 PLQQLQKQQLLIQQQQMALAKCPICMNDPISMPYS-ADCGHLFCYYCIKTSCMIDSSFTC 406

Query: 296 PYCGS 300
           P C S
Sbjct: 407 PRCNS 411



gb|AAH05375.1| PXMP3 protein [Homo sapiens]
gb|AAH93043.1| Peroxisomal membrane protein 3 [Homo sapiens]
sp|P28328|PEX2_HUMAN Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) (RING finger protein 72)
gb|AAC12785.1| peroxisome assembly factor-1 [Homo sapiens]
gb|AAA60141.1| peroxisomal membrane protein
gb|AAF97687.1| 35 kDa peroxisomal membrane protein [Homo sapiens]
ref|NP_000309.1| peroxisomal membrane protein 3 [Homo sapiens]
(305 aa)

Score: 91 bits (225), Expect: 3.53365e-17
Length: 278, Idn/Pos/Gap = 73/116/10 (26%/41%/3%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++A L +  + F++       
Sbjct:  17 ISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLWVFLWRFTIYSKNATV  76

Query:  86 GDVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLER-YQTMR-YTGSPWV 143
           G    N+ Y+ D    +        ++ ++  Y    + G +L ER Y   R +  + + 
Sbjct:  77 GQSVLNIKYKNDFSPNLRYQPP---SKNQKIWYAVCTIGGRWLEERCYDLFRNHHLASFG 133

Query: 144 PSASSAEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNR 203
                   +  LLK    +NF +F    K+    ER+  +     +    R + FE +NR
Sbjct: 134 KVKQCVNFVIGLLKLGGLINFLIFLQRGKFATLTERLLGIHSVFCKPQNIREVGFEYMNR 193

Query: 204 QLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKS 263
           +L+W GF E  I ++P++    L   L            S   ++   SGK  C LCG+ 
Sbjct: 194 ELLWHGFAEFLIFLLPLINVQKLKAKLSSWCIPLTGAPNSDNTLAT--SGK-ECALCGE- 249

Query: 264 RPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
            P MPH  I C H+FCY C       +    CP CG+E
Sbjct: 250 WPTMPHT-IGCEHIFCYFCAKSSFLFDVYFTCPKCGTE 286



dbj|BAA06308.1| peroxisome assembly factor-1 [Cricetulus griseus]
emb|CAA78929.1| peroxisome assembly factor 1 [Cricetulus griseus]
sp|Q06438|PEX2_CRIGR Peroxisome assembly factor-1 (PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3)
(304 aa)

Score: 87 bits (214), Expect: 6.33876e-16
Length: 278, Idn/Pos/Gap = 74/116/10 (26%/41%/3%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFP  85
           ++ LDA ELN  +   +W           P LL   E E++A L L  + F++       
Sbjct:  16 ISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLWLFLWRFTIYSKNATV  75

Query:  86 GDVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLER-YQTMRYTG-SPWV 143
           G    N+ Y+ D     S       ++ ++  Y    + G +L ER Y   R    + + 
Sbjct:  76 GQSVLNIQYKNDFS---SNSRYQPPSKNQKLWYAVCTIGGRWLEERCYDLFRNRHLASFG 132

Query: 144 PSASSAEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNR 203
                  ++  LLK  E +NF +F    K+    ER+  +     +    R + F+ +NR
Sbjct: 133 KVKQCMNVMVGLLKLGELINFLIFLQKGKFATLTERLLGIHSVFCKPQNIREVGFDYMNR 192

Query: 204 QLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKS 263
           +L+W GF E  I ++P++        L           A+    +   SGK  C LCG+ 
Sbjct: 193 ELLWHGFAEFLIFLLPLINIQKFKAKLSSWCI--PLTGAASSDSALASSGK-ECALCGE- 248

Query: 264 RPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
            P MPH  I C H+FCY C+      +    CP CG E
Sbjct: 249 WPTMPHT-IGCEHVFCYYCVKSSFLFDMYFTCPKCGIE 285



gb|EAA70670.1| hypothetical protein FG00724.1 [Gibberella zeae PH-1]
ref|XP_380900.1| hypothetical protein FG00724.1 [Gibberella zeae PH-1]
(439 aa)

Score: 82 bits (201), Expect: 1.90744e-14
Length: 281, Idn/Pos/Gap = 74/117/50 (26%/41%/17%)

Query:  63 AELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDVGNTVSEGDSVIM---TRGRRFLYG 119
           AE+   LR + F  +V       G   QNL Y      T +  D +I+   ++ ++ LYG
Sbjct: 108 AEIMLALRAVLFKLTVWDHDATYGAALQNLKY------TDARNDGLILKAPSKVQKSLYG 161

Query: 120 CAYVLGHYLLERYQTMRYTG-------SPWVPSASS-AEMIDNLLKSMESLNFFLFFLMR 171
              V G+Y   R++             SP +   S     I  +  +   ++F +F L  
Sbjct: 162 LVTVFGNYAWTRWEDWLLEHDDGYDEPSPRLKRLSKFTSAISTVHSAAACVSFLVFLLHG 221

Query: 172 KYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQ----SPLLH 227
           +YR  L+RI R+RL    +  +R +SFE LNRQLVW  FTE  + V+P++        L 
Sbjct: 222 RYRTLLDRILRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLIGIQRWRRWLT 281

Query: 228 RILRKAVFHGRFGAASREVVSQEHS--GKIRCRLC------------------------- 260
           R  RK     R G       + E++   +  C +C                         
Sbjct: 282 RTWRKTKDIIRTGPQEEGKANGEYAFLPERTCAICYQDQNNATSENEVMAAAASSGVVGS 341

Query: 261 GKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEG--CPYCG 299
            ++    P+  IPC  ++C+VC+A ++     EG  C  CG
Sbjct: 342 AQTDITNPYETIPCGCVYCFVCLATRLEREEGEGWTCLRCG 382



emb|CAA60739.1| peroxisome assembly factor [Podospora anserina]
sp|P51021|PEX2_PODAN Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal protein CAR1)
(554 aa)

Score: 80 bits (197), Expect: 5.50369e-14
Length: 291, Idn/Pos/Gap = 82/129/66 (28%/44%/22%)

Query:  62 EAELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDVGNTVSEGDSVIM--TRGRRFLYG 119
           +AE+   LR + F  ++       G   QNL Y  D  +T     SV++  ++ ++ LYG
Sbjct: 159 DAEISLALRAVIFKLTIWDHDATYGAALQNLKY-TDARHT----GSVLVPPSKWQKGLYG 213

Query: 120 CAYVLGHYLLERYQT-MRYTG------SPWVPSASSAEMIDNL--LKSMESLNFFLFFLM 170
              V G Y+  +++  +R         SP V   SS  M D L  L +  S   FL FL+
Sbjct: 214 LMTVGGRYMWSKWENWLREQDGGYDEPSPTVQRLSS--MTDRLSTLHAAASFASFLVFLL 271

Query: 171 R-KYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQSPLLHRI 229
           + +YR  L+R+ R+RL    +  +R +SFE LNRQLVW  FTE  + V+P++      R 
Sbjct: 272 QGRYRTLLDRVLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGINRWRRW 331

Query: 230 LRKAVFHGRFGAASREVVS-------QEHSGKI------RCRLCGKSR-------PLM-- 267
           L       R    +++++S       +E  G+        C +C + +        LM  
Sbjct: 332 L------ARTWRKTKKIMSTTGGEGAEEKKGEFAFLPERTCAICYQDQNQATNENELMAA 385

Query: 268 -----------------PHILIPCRHLFCYVCMAMKIRTNGSEG--CPYCG 299
                            P+  IPC  ++C+VC+A +I     EG  C  CG
Sbjct: 386 ATSKTGVVGSAQTDVTNPYETIPCGCVYCFVCLATRIEREEGEGWNCLRCG 436



gb|EAA58944.1| hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]
ref|XP_408193.1| hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]
(444 aa)

Score: 79 bits (194), Expect: 1.25717e-13
Length: 292, Idn/Pos/Gap = 77/123/51 (26%/42%/17%)

Query:  55 PRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDVGNTVSEGDSVIMTRGR 114
           P L      E++ +LR + F  S+       G   Q+L Y VD  +      +  M +  
Sbjct: 104 PHLRDDWSHEIQFVLRAILFKLSIWDHDASYGAALQSLKY-VDSRSKGPVHSTPTMLQ-- 160

Query: 115 RFLYGCAYVLGHYLLERYQTM---RYTG-SPWVPSASSAEMIDNLLKSMESL----NFFL 166
           + LYG   V G Y  +++++    R  G     P   S   I N L +  S+    +F +
Sbjct: 161 KSLYGLLTVGGRYAWDKWESWLISREGGYEEPSPEVRSLSRITNFLSTTHSIAAFFSFLI 220

Query: 167 FFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQ---- 222
           F +  +YR  ++R+ R+RL      A+R +SFE LNRQLVW  FTE  + ++P++     
Sbjct: 221 FLVDGRYRTLIDRLLRMRLTPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRW 280

Query: 223 SPLLHRILRKAVFHGRFGAASREVVSQEHSGKI------RCRLCGKSRPLM--------- 267
              + R  RKA+   R  +   + VS E  G++       C +C K+             
Sbjct: 281 RRWVSRAWRKAMSAIRSTSVDEDEVS-EKQGELAFLPERSCAICYKANNTATTETEVIAA 339

Query: 268 ------------------PHILIPCRHLFCYVCMAMKIRTNGSEG--CPYCG 299
                             P+  IPC  ++C+VC+  K+     EG  C  CG
Sbjct: 340 ASSGAGGIIGSAQTDITNPYETIPCGCIYCFVCIVQKLEGEEGEGWVCLRCG 391



emb|CAF97942.1| unnamed protein product [Tetraodon nigroviridis]
(378 aa)

Score: 78 bits (191), Expect: 2.87168e-13
Length: 143, Idn/Pos/Gap = 49/78/10 (34%/54%/6%)

Query: 162 LNFFLFFLMRKYRNPL--ERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIP 219
           +NF +F  +RK ++P   ERI   R   ++    R +S++ +NR+L+W GF+E  I ++P
Sbjct: 198 VNFLVF--LRKGQHPRLSERIVGARAAFSKPDVVRDVSYQYMNRELLWHGFSEFLIFLLP 255

Query: 220 ILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKI-RCRLCGKSRPLMPHILIPCRHLF 278
           ++ +  L       VF    GA +   V+ E  G + +C LCG+  P MPH  + CRH+F
Sbjct: 256 LINTRRLKATASSFVFG---GAKTEGKVASEGQGLLNQCGLCGE-WPTMPHT-VGCRHVF 310

Query: 279 CYVCMAMKIRTNGSEGCPYCGSE 301
           CY C+      +    CP CG+E
Sbjct: 311 CYYCIKSHSMADPFLVCPKCGAE 333



gb|AAL29060.2| LD46714p [Drosophila melanogaster]
(306 aa)

Score: 77 bits (189), Expect: 4.50622e-13
Length: 278, Idn/Pos/Gap = 73/125/25 (26%/44%/8%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDV  88
           +DA  LN ++   + ++L   + +I+P L   ++ EL  +++   +  SVG      G  
Sbjct:  38 IDAIYLNKDIARLIRDNLLENLQAISPVLFIKIQPELDLIIQSAIWFGSVGKRCSTFGQQ  97

Query:  89 YQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQTMRYTGSPWVPSASS 148
              L Y           D+  +T  R  L+    VL  Y+ + ++  R T    V   S 
Sbjct:  98 LLVLAY-----------DAEKLTVSRLVLHFILTVLPGYV-KSWEERRLTRR--VEWFSE 143

Query: 149 AEM-IDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVW 207
           A M ++N    +  LN+F F    +    ++ +  L          R + ++ L R+L+W
Sbjct: 144 AIMWVENSALILNILNYFRFLKTGRKPTLVDYLLGLDYISLRNNQRRDIGYKYLTRELLW 203

Query: 208 EGFTELAISVIPILQSPLLHRILRKAVFHGRF-----GAASREVVSQEHSGKIRCRLCGK 262
            GF E+   V+PI+    L R+L+   F GR      G A    ++ + +    C  CG+
Sbjct: 204 GGFMEILGLVLPIINFRKLQRVLKSWTFSGRRLEDRDGPA---FLAPQMTLSTTCTFCGE 260

Query: 263 SRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGS 300
            RP +PH +  C H++CY C+   + T+ S  CP CGS
Sbjct: 261 -RPTLPHHM-GCGHIYCYYCLNANVLTDASFCCPNCGS 296



ref|NP_648210.1| CG7081-PA [Drosophila melanogaster]
gb|AAF50441.1| CG7081-PA [Drosophila melanogaster]
(281 aa)

Score: 76 bits (187), Expect: 8.28588e-13
Length: 278, Idn/Pos/Gap = 73/125/25 (26%/44%/8%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDV  88
           +DA  LN ++   + ++L   + +I+P L   ++ EL  +++   +  SVG      G  
Sbjct:  13 IDAIYLNKDIARLIRDNLLENLQAISPVLFIKIQPELDLIIQSAIWFGSVGKRCSTFGQQ  72

Query:  89 YQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQTMRYTGSPWVPSASS 148
              L Y           D+  +T  R  L+    VL  Y+ + ++  R T    V   S 
Sbjct:  73 LLVLAY-----------DAEKLTVSRLVLHFILTVLPGYV-KSWEERRLTRR--VEWFSE 118

Query: 149 AEM-IDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVW 207
           A M ++N    +  LN+F F    +    ++ +  L          R + ++ L R+L+W
Sbjct: 119 AIMWVENSALILNILNYFRFLKTGRKPTLVDYLLGLDYISLRNNQRRDIGYKYLTRELLW 178

Query: 208 EGFTELAISVIPILQSPLLHRILRKAVFHGRF-----GAASREVVSQEHSGKIRCRLCGK 262
            GF E+   V+PI+    L R+L+   F GR      G A    ++ + +    C  CG+
Sbjct: 179 GGFMEILGLVLPIINFRKLQRVLKSWTFSGRRLEDRDGPA---FLAPQMTLSTTCTFCGE 235

Query: 263 SRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGS 300
            RP +PH +  C H++CY C+   + T+ S  CP CGS
Sbjct: 236 -RPTLPHHM-GCGHIYCYYCLNANVLTDASFCCPNCGS 271



gb|EAL29834.1| GA20087-PA [Drosophila pseudoobscura]
(284 aa)

Score: 75 bits (183), Expect: 2.18113e-12
Length: 278, Idn/Pos/Gap = 69/117/20 (24%/42%/7%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDV  88
           +DA  LN ++   + ++L   + +I+P L    + EL  L++   +  SVG      G  
Sbjct:  13 IDAISLNKDIARLIRDNLLENLQAISPVLFIKFQPELDLLIQSAIWFGSVGKRCSTFGQQ  72

Query:  89 YQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQTMRYTGSPWVPSASS 148
              L Y           D+  +T  R  L+    VL  Y+    +        W   A +
Sbjct:  73 LLVLAY-----------DAEKLTVSRLVLHFVLTVLPGYVKSWEERRLARRVEWFSQAIA 121

Query: 149 AEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWE 208
               +N    +  LN+F F    +    ++    L          R + ++ L R+L+W 
Sbjct: 122 --WAENSALVLNILNYFRFLKTGRKPTLIDYFLGLDYISLRNNQRRDIGYKYLTRELLWG 179

Query: 209 GFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGK-----IRCRLCGKS 263
           GF E+   V+PI+    L R+L+      +FGA  RE+ + E           C  CG+ 
Sbjct: 180 GFMEILGLVLPIINFRKLQRLLKSWTSGQQFGARRREMDTTELLAPKMMVGTTCTYCGE- 238

Query: 264 RPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSE 301
           RP +PH +  C H++CY C++  + T+ S  C  CG +
Sbjct: 239 RPTLPHHM-GCGHIYCYYCISANVLTDASFCCTICGVQ 275



ref|XP_329260.1| hypothetical protein [Neurospora crassa]
gb|EAA35361.1| hypothetical protein [Neurospora crassa]
(639 aa)

Score: 73 bits (179), Expect: 7.7531e-12
Length: 330, Idn/Pos/Gap = 83/135/63 (25%/40%/19%)

Query:  26 VACLDARELNVEVFSTLWESLAATVSSINPRLLQVL----EAELRALLRLLYFAFSVGVG  81
           V  +DA  L+ E+   L   +   +  I   +   L    +AE+  +LR + F  ++   
Sbjct: 116 VGQVDAELLDAELVDLLRTQVGDALKYIGGGVSSTLKDEWDAEILLILRAILFKLTIWDH 175

Query:  82 RPFPGDVYQNLTYRVDVGNTVSEGDSVIM--TRGRRFLYGCAYVLGHYLLERYQTMRYTG 139
               G   QNL Y         +   V+   ++ ++ LYG   V G YL  +++T  Y  
Sbjct: 176 DATYGAALQNLRY-----TDARKSGPVLQPPSKLQKSLYGFVTVGGKYLWTKWET--YLL 228

Query: 140 SPWVPSASSAE----MIDNLLKSMESL----------NFFLFFLMRKYRNPLERIFRLRL 185
                S+ S E     I  L +  ES+          +F +F L  +YR  L+R+ R+RL
Sbjct: 229 DHDEASSYSVEGPNPNIQRLSRLTESIGTFHAFASFASFLVFLLHGRYRTILDRLLRMRL 288

Query: 186 RRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGR--FGAAS 243
               +  +R +SFE LNRQLVW  FTE  + V+P++      R L +     +     +S
Sbjct: 289 APPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGINRWRRWLARTWRRTKSMLTTSS 348

Query: 244 REVVSQEHSGKI------RCRLCGKSR-------PLM-------------------PHIL 271
               +Q   G+        C +C + +        LM                   P+  
Sbjct: 349 TNDPTQNKGGEFAFLPERTCAICYQDQNSAKSEAELMAAASSSSGVVGSAQTDITNPYEA 408

Query: 272 IPCRHLFCYVCMAMKIRTNGSEG--CPYCG 299
           +PC  ++C+VC+A +I     EG  C  CG
Sbjct: 409 MPCGCVYCFVCVATRIEREEGEGWTCLRCG 438



gb|AAC49423.1| Pay5p
(380 aa)

Score: 72 bits (177), Expect: 1.17668e-11
Length: 308, Idn/Pos/Gap = 81/125/33 (26%/40%/10%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDV  88
           LDA  L+ E+   L   L    ++ +P      E+EL   L+L+ F  +V       G  
Sbjct:  22 LDASLLDAELVDLLKNQLFKGFTNFHPEFRDKYESELVLALKLILFKLTVWDHAITYGGK  81

Query:  89 YQNLTYRVDVGNT--VSEGDSVIMTRGRRFLY-GCAYVLGH---YLLERYQTMRYTGSPW 142
            QNL + +D  ++  +    SVI   G   L  G  Y+      YLL R +    T    
Sbjct:  82 LQNLKF-IDSRHSSKLQIQPSVIQKLGYGILVVGGGYLWSKIEGYLLARSEDDVATDGTS 140

Query: 143 VPSASSAE------MIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRAL 196
           V  AS+A          +LL S  +L  F+ FL   Y   + R+ R+RL  ++  ++R +
Sbjct: 141 VRGASAARGALKVANFASLLYSAATLGNFVAFLYTGYATVIMRLLRIRLVPSQRTSSRQV 200

Query: 197 SFEMLNRQLVWEGFTELAISV-IPILQSPLLHRILRKAVFHGRFGAASREVVSQ---EHS 252
           S+E  NRQLVW  FTE  I +   +    L  RI RK          + E  S+    H 
Sbjct: 201 SYEFQNRQLVWNAFTEFLIFILPLLQLPKLKRRIERKLQSLNVTRVGNVEEASEGELAHL 260

Query: 253 GKIRCRLCGKSRPLMPHILIP--------------CRHLFCYVCMAMKIRTNGSEG--CP 296
            +  C +C +                         C H++CYVC+  K+     +G  C 
Sbjct: 261 PQKTCAICFRDEEEQEGGGGASHYSTDVTNPYQADCGHVYCYVCLVTKLAQGDGDGWNCY 320

Query: 297 YCGSEFER 304
            C  + ++
Sbjct: 321 RCAKQVQK 328



emb|CAG77647.1| YlPEX2 [Yarrowia lipolytica CLIB99]
ref|XP_504845.1| YlPEX2 [Yarrowia lipolytica]
sp|Q99155|PEX2_YARLI Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal protein PAY5)
(381 aa)

Score: 70 bits (172), Expect: 4.66186e-11
Length: 309, Idn/Pos/Gap = 81/126/34 (26%/40%/11%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDV  88
           LDA  L+ E+   L   L    ++ +P      E+EL   L+L+ F  +V       G  
Sbjct:  22 LDASLLDAELVDLLKNQLFKGFTNFHPEFRDKYESELVLALKLILFKLTVWDHAITYGGK  81

Query:  89 YQNLTYRVDVGNT--VSEGDSVIMTRGRRFLY-GCAYV---LGHYLLERYQTMRYTGSPW 142
            QNL + +D  ++  +    SVI   G   L  G  Y+   +  YLL R +    T    
Sbjct:  82 LQNLKF-IDSRHSSKLQIQPSVIQKLGYGILVVGGGYLWSKIEGYLLARSEDDVATDGTS 140

Query: 143 VPSASSAE------MIDNLLKSMESL-NFFLFFLMRKYRNPLERIFRLRLRRAETGATRA 195
           V  AS+A          +LL S  +L NF  F    +Y   + R+ R+RL  ++  ++R 
Sbjct: 141 VRGASAARGALKVANFASLLYSAATLGNFVAFLYTGRYATVIMRLLRIRLVPSQRTSSRQ 200

Query: 196 LSFEMLNRQLVWEGFTELAISV-IPILQSPLLHRILRKAVFHGRFGAASREVVSQ---EH 251
           +S+E  NRQLVW  FTE  I +   +    L  RI RK          + E  S+    H
Sbjct: 201 VSYEFQNRQLVWNAFTEFLIFILPLLQLPKLKRRIERKLQSLNVTRVGNVEEASEGELAH 260

Query: 252 SGKIRCRLCGKSRPLMPHILIP--------------CRHLFCYVCMAMKIRTNGSEG--C 295
             +  C +C +                         C H++CYVC+  K+     +G  C
Sbjct: 261 LPQKTCAICFRDEEEQEGGGGASHYSTDVTNPYQADCGHVYCYVCLVTKLAQGDGDGWNC 320

Query: 296 PYCGSEFER 304
             C  + ++
Sbjct: 321 YRCAKQVQK 329



gb|EAA45311.2| ENSANGP00000023268 [Anopheles gambiae str. PEST]
ref|XP_309872.2| ENSANGP00000023268 [Anopheles gambiae str. PEST]
(286 aa)

Score: 69 bits (169), Expect: 1.02992e-10
Length: 282, Idn/Pos/Gap = 66/117/20 (23%/41%/7%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSVGVGRPFPGDV  88
           LD+ +L+ E+ + L + +   +  + P LL  L+ E+  +L    + FS+       G  
Sbjct:  22 LDSIQLDNEITNLLRQQIQNILQVLPPGLLSHLQPEINFVLNSALWNFSIRTHYATFGQQ  81

Query:  89 YQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQTMRYTGSPWVPSASS 148
             ++ Y  D            +   +  L+   Y+L   L    +  ++  + W      
Sbjct:  82 MLSIAYEKDQ-----------LPSAKLALH---YLLTTVLPYAKENAQFRLTNWSRVQKL 127

Query: 149 AEMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWE 208
            ++ +N L     +NFF F       + ++ + R+  R  +    R + +  + R+LVW 
Sbjct: 128 LQLAENALVLFNLVNFFKFLRSGTRPSLVDCLLRINHRSLDGAKRRTIGYSYMTRELVWA 187

Query: 209 GFTELAISVIPILQSPLLHRILRKAVFHGRFGAA-SREVVSQEHSGKIRCRLCGKSRPLM 267
           GF EL    IP +    L R LR  +   R  AA  R+    E +   RC  C + R ++
Sbjct: 188 GFMELLGFTIPFVNYHALKRKLRNLL---RIEAAPQRQDEHVELTVDTRCAYCNE-RVIL 243

Query: 268 PHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSEFERAESVI 309
           PH +  CRH+FCY+C+      +    C  C    E    V+
Sbjct: 244 PHHM-GCRHVFCYLCLKGNQLADAGFQCNVCDYRSETFRKVV 284



gb|EAA48997.1| hypothetical protein MG00655.4 [Magnaporthe grisea 70-15]
ref|XP_368589.1| hypothetical protein MG00655.4 [Magnaporthe grisea 70-15]
(498 aa)

Score: 68 bits (167), Expect: 1.90965e-10
Length: 169, Idn/Pos/Gap = 52/79/14 (30%/46%/8%)

Query:  64 ELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYV 123
           E+   LR + F  ++       G   QNL Y  D  NT S    V  +R ++ LYG   V
Sbjct: 120 EILLALRAVLFKLTIWDHDATYGAALQNLKY-TDARNTGSV--PVPPSRLQKALYGTVTV 176

Query: 124 LGHYLLERYQTM----------RYTGSPWVPSASS-AEMIDNLLKSMESLNFFLFFLMRK 172
            G Y+  +++                 P V   S   E+  N+  +   ++F  F +  +
Sbjct: 177 CGKYVWTKWEDWLIDQDNGAYDSQQARPVVQRLSRLTELASNIHAAGALVSFMAFLINGR 236

Query: 173 YRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPIL 221
           YR  L+RI R+RL    +  +R +SFE LNRQLVW  FTE  + V+P++
Sbjct: 237 YRTLLDRILRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLV 285



gb|EAK81310.1| hypothetical protein UM00325.1 [Ustilago maydis 521]
ref|XP_397940.1| hypothetical protein UM00325.1 [Ustilago maydis 521]
(548 aa)

Score: 67 bits (162), Expect: 6.6203e-10
Length: 284, Idn/Pos/Gap = 81/127/24 (28%/44%/8%)

Query:   9 SLQRLLAPGQHQSETQLVACLDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRAL  68
           SL R   P     + Q V  LDA  L+ E+   L + +   + SI   L   LE EL  L
Sbjct:  70 SLHRFPTP---ILKIQRVNQLDAELLDRELAELLLDPVKKALGSIRSTLPSDLEPELLLL 126

Query:  69 LRLLYFAFSVGVGRPFPGDVYQNLTYR---VDVGNTVSEGDSVIMTRGRRFLYGCAYVLG 125
           L+L  F FS+       G + QNL YR      G   S      ++R +  LY    ++ 
Sbjct: 127 LKLALFKFSIVDRGASYGSMLQNLKYRNEWAHRGALQSTARDQPLSRLQLTLYPLLTIVA 186

Query: 126 HYLLERYQT-MRYTGSPWVPSASSAEMIDNLLKSMESL-------NFFLFFLMRKYRNPL 177
            YL  ++Q  M       +P+  S  ++  L  + + +       NF +F    K+R+  
Sbjct: 187 PYLGSKWQDHMTSLSYSDMPNNDSRRLLWKLTDATQRIWSALVLANFAVFLADGKFRSIA 246

Query: 178 ERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQSPLLHRILRKAVFHG 237
           +R+  +RL  ++    R +SFE LNRQLVW  FTE  + ++P+++   L R L K   H 
Sbjct: 247 DRLLGMRLTYSQRTMNRNVSFEFLNRQLVWHAFTEFLLFLLPLVRPKRLFRRLMKLPTHP 306

Query: 238 RFGA----------ASREVVSQEHSGKIRCRLCGKSRPLMPHIL 271
           +  A          ++R  + Q+  G+ R      S PL+ HI+
Sbjct: 307 KLLAVVWRFLPLAISARLGIRQDAVGRTRFSREDVSMPLVKHIV 350



gb|AAQ04625.1| peroxisome protein Pex2 [Paracoccidioides brasiliensis]
(240 aa)

Score: 64 bits (156), Expect: 3.54185e-09
Length: 195, Idn/Pos/Gap = 51/80/46 (26%/41%/23%)

Query: 164 FFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQ- 222
           F +F    +YR  ++R+ R+RL    T  +R +SFE LNRQLVW  FTE  + ++P++  
Sbjct:   1 FLVFLTNGRYRTLIDRLLRMRLAPPFTQVSREVSFEYLNRQLVWHAFTEFLLFLLPLVGI  60

Query: 223 ---SPLLHRILRKAVFHGRFGAASREVVSQEHSG-----KIRCRLC------GKSRPLM- 267
                 + R  RK +   R      +   +   G     +  C +C        SR  M 
Sbjct:  61 GRWRRWITRAWRKTMSSLRTADEGNDEQVKAQGGLAFLPERTCPICYQEQNPAASRKTMC 120

Query: 268 --------------------PHILIPCRHLFCYVCMAMKIRTNGSEG--CPYCGSEFERA 305
                               P+  +PC  ++C+VC+A K+     EG  C  CG   ++ 
Sbjct: 121 WAPRGLRGGIISSAQTDVVNPYETMPCGCIYCFVCIAEKLEAEEGEGWICLRCGEIVKKC 180

Query: 306 --------ESVIPSQ 312
                   E V+PS 
Sbjct: 181 KPWNGDVLEDVLPSH 195



emb|CAG85956.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_457905.1| unnamed protein product [Debaryomyces hansenii]
(445 aa)

Score: 60 bits (146), Expect: 4.98799e-08
Length: 347, Idn/Pos/Gap = 79/138/93 (22%/39%/26%)

Query:  26 VACLDARELNVEVFSTLWESLAATVS---------SINPRLLQVLEAELRALLRLLYFAF  76
           V+ LDA  L+ E+ S L E L +              +P L  +L       L L+ F  
Sbjct:  11 VSQLDANILDSELISLLKEQLTSIFQLHSTSWWTYDQHPELWSLL-------LNLMVFRL  63

Query:  77 SVGVGRPFPGDVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQTMR 136
           +V       G + QNL        T  +   +I    R  L  CA ++G Y   + Q+  
Sbjct:  64 TVWRSGSSYGALLQNLKL------TDFKKGKLIGYSKRTLL--CAVLVGDYFYSKLQSYL 115

Query: 137 YT--GSPWVPSASSAEMIDNL------------------LKSMESLNFFLFFLMRKYRNP 176
           Y+   S    +AS+ ++++++                   K +  +NF LF +  +Y + 
Sbjct: 116 YSIDESEASRNASNFKLLNSIKSFFITHKTKILLGLNDCFKLLNLVNFTLFLVNGRYPSI 175

Query: 177 LERIFRLRLRRAETGATR----ALSFEMLNRQLVWEGFTELAISVIPILQSPLLHRILRK 232
             R+F + L    T   +     ++FE  NRQLVW   TE  + ++P++Q   L R+ +K
Sbjct: 176 SHRLFGISLTPIVTDLLKFNGNKVNFEFQNRQLVWNVMTEFLVFILPLMQLGKLKRMTKK 235

Query: 233 AVFHGRFGAASREVVSQEH-SGKI------------RCRLCGKSRPLM------------ 267
            +   + G        Q H +G I            +C +C  +  +             
Sbjct: 236 ILSPYKKG--------QRHETGDIPIFTPYTNLPVSQCAICHNNNDIAATSSNKNSSISS 287

Query: 268 ------PHILIPCRHLFCYVCMAMKIRT-----NGSEGCPYCGSEFE 303
                 P++   C H++CY+C+A K  +     + S+GC  CG + +
Sbjct: 288 SCMVTNPYV-TNCGHIYCYICIATKFNSLENTDSDSKGCLRCGMKLQ 333



gb|AAW40683.1| peroxisome assembly protein, putative [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_566502.1| peroxisome assembly protein, putative [Cryptococcus neoformans var. neoformans JEC21]
(418 aa)

Score: 60 bits (145), Expect: 5.60605e-08
Length: 205, Idn/Pos/Gap = 57/96/14 (27%/46%/6%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSV--GVGRPFPG  86
           LDA EL+  + S L E +  ++ +  P++    + E+  +++L+ F   +   + R  PG
Sbjct:  22 LDADELDDALVSMLGEKVLRSIDNFKPKVSWDFKPEIELVIKLVIFRLGICDSLSRSSPG  81

Query:  87 DVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQ----TMRYTGSP- 141
              QNL     + +    G   I +    +L     +   YLL+R +    + ++   P 
Sbjct:  82 AKLQNLK----LIHHPQLGIKTIRSALLLYLLLHPPIFPSYLLKRIRQHALSKQWPDLPN 137

Query: 142 --WVPSASSA-EMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSF 198
             W   A  A   I+   K  E+  +  F    KY + L RI  LRL  ++   T+ +S+
Sbjct: 138 YDWRKKAWKALGRIELASKIWEASGWAGFLWDGKYPSLLMRILGLRLVPSQPHLTKLVSY 197

Query: 199 EMLNRQLVWEGFTELAISVIPILQS 223
           E +NRQLVW  FTE  + VIP+L +
Sbjct: 198 EFMNRQLVWSAFTEFLMFVIPLLPT 222



gb|EAL23506.1| hypothetical protein CNBA1530 [Cryptococcus neoformans var. neoformans B-3501A]
(418 aa)

Score: 60 bits (145), Expect: 5.70038e-08
Length: 205, Idn/Pos/Gap = 57/96/14 (27%/46%/6%)

Query:  29 LDARELNVEVFSTLWESLAATVSSINPRLLQVLEAELRALLRLLYFAFSV--GVGRPFPG  86
           LDA EL+  + S L E +  ++ +  P++    + E+  +++L+ F   +   + R  PG
Sbjct:  22 LDADELDDALVSMLGEKVLRSIDNFKPKVSWDFKPEIELVIKLVIFRLGICDSLSRSSPG  81

Query:  87 DVYQNLTYRVDVGNTVSEGDSVIMTRGRRFLYGCAYVLGHYLLERYQ----TMRYTGSP- 141
              QNL     + +    G   I +    +L     +   YLL+R +    + ++   P 
Sbjct:  82 AKLQNLK----LIHHPQLGIKTIRSALLLYLLLHPPIFPSYLLKRIRQHALSKQWPDLPN 137

Query: 142 --WVPSASSA-EMIDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSF 198
             W   A  A   I+   K  E+  +  F    KY + L RI  LRL  ++   T+ +S+
Sbjct: 138 YDWRKKAWKALGRIELASKIWEASGWAGFLWDGKYPSLLMRILGLRLVPSQPHLTKLVSY 197

Query: 199 EMLNRQLVWEGFTELAISVIPILQS 223
           E +NRQLVW  FTE  + VIP+L +
Sbjct: 198 EFMNRQLVWSAFTEFLMFVIPLLPT 222



gb|EAK95929.1| likely peroxisomal import RING finger complex component Pex2 [Candida albicans SC5314]
gb|EAK95865.1| likely peroxisomal import RING finger complex component Pex2 [Candida albicans SC5314]
(420 aa)

Score: 53 bits (126), Expect: 9.10081e-06
Length: 184, Idn/Pos/Gap = 47/79/36 (25%/42%/19%)

Query: 152 IDNLLKSMESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRAL--------SFEMLNR 203
           ++N LK    +NF  F +  +Y + + RI  +     ET  +  L        ++E  NR
Sbjct: 148 LENSLKIANLVNFTFFLVNGQYSSLVNRILGI----IETPISSDLLKFNGSNVNYEFQNR 203

Query: 204 QLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASRE-----VVSQEHSGKIRCR 258
           QLVW   TE  + ++P+LQ   L R+ RK +   +     +      + S  +     C 
Sbjct: 204 QLVWNVMTEFLVFILPLLQLRKLGRMTRKLLGRSKNSLDVQSGNVPTLTSYTNLPVSECA 263

Query: 259 LC-----------GKSRPLMPHILIP----CRHLFCYVCMAMK---IRTNGSE-GCPYCG 299
           +C           G++ P    +  P    C H++CYVC++ +   I+ NG +  C  CG
Sbjct: 264 ICHDNNNQASQTGGRTFPSAGPVTNPYITNCGHVYCYVCISTRFNMIKVNGEDMPCLRCG 323

Query: 300 SEFE 303
              E
Sbjct: 324 KRLE 327



gb|AAX80685.1| peroxin-2 [Trypanosoma brucei]
(332 aa)

Score: 50 bits (118), Expect: 8.23611e-05
Length: 260, Idn/Pos/Gap = 65/103/32 (25%/39%/12%)

Query:  60 VLEAELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDV-------GNTVSEGDSVIMTR 112
           V + E   LL ++ F  S        GD  QNL  R ++        + V    S++ +R
Sbjct:  76 VYQDEFSFLLDVILFFGSTWRCGQSVGDRMQNLVLRNEIKALESGQSDAVQLVHSLVPSR 135

Query: 113 GRRFLYGCAYVLGHYLLERYQTMRYTGSPWVPSASSA--EMIDNLLKSMES-------LN 163
            R  LYG   +   YL  + Q  R     W    +      +  LLK++         L+
Sbjct: 136 ARLLLYGVLNLFVPYLFRKLQR-RTLEEGWEDGGAGVVKRKLAKLLKAVSVSWMIISLLH 194

Query: 164 FFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIPILQS 223
              F    +YR P+ER+  LRL        R  +   LN+ + W+ ++   ISV+ I   
Sbjct: 195 TLHFLATAQYRTPVERMLSLRLVYGSQDTRRFTNLIYLNQHIFWQIWSSF-ISVLNI--G 251

Query: 224 PLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKSRPLMPHILIPCRHLFCYVCM 283
               R+ R   F   F A        +++    C  C  ++P +P     C HL+CY C+
Sbjct: 252 RYTSRVTR---FLQAFTAKPGNPSLTDNA----CSAC-HNKPTLPQ-RSNCGHLYCYYCI 302

Query: 284 AMKIRTNGSEG---CPYCGS 300
             ++   GS     C  CG+
Sbjct: 303 KSRLLGPGSAKSFRCLRCGT 322



emb|CAC59701.1| peroxin-2 [Trypanosoma brucei]
(332 aa)

Score: 50 bits (118), Expect: 8.95279e-05
Length: 265, Idn/Pos/Gap = 64/106/42 (24%/40%/15%)

Query:  60 VLEAELRALLRLLYFAFSVGVGRPFPGDVYQNLTYRVDV-------GNTVSEGDSVIMTR 112
           V + E   LL ++ F  S        GD  QNL  R ++        + V    S++ +R
Sbjct:  76 VYQDEFSFLLDVILFFGSTWRCGQSVGDRMQNLVLRNEIKALESGQSDAVQLVHSLVPSR 135

Query: 113 GRRFLYGCAYVLGHYLLERYQ--------------TMRYTGSPWVPSASSAEMIDNLLKS 158
            R  LYG   +   YL  + Q               ++   +  + + S + MI +LL +
Sbjct: 136 ARLLLYGVLNLFVPYLFRKLQRRALEEGWEDGGAGVVKRKLAKLLKAVSVSWMIISLLHT 195

Query: 159 MESLNFFLFFLMRKYRNPLERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVI 218
           +       F    +YR P+ER+  LRL        R  +   LN+ + W+ ++   ISV+
Sbjct: 196 LH------FLATAQYRTPVERMLSLRLVYGSQDTRRFTNLIYLNQHIFWQIWSSF-ISVL 248

Query: 219 PILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKSRPLMPHILIPCRHLF 278
            I       R+ R   F   F A        +++    C  C  ++P +P     C HL+
Sbjct: 249 NI--GRYTSRVTR---FLQAFTAKPGNPSLTDNA----CSAC-HNKPTLPQ-RSNCGHLY 297

Query: 279 CYVCMAMKIRTNGSEG---CPYCGS 300
           CY C+  ++   GS     C  CG+
Sbjct: 298 CYYCIKSRLLGPGSAKSFRCLRCGT 322



emb|CAE62081.1| Hypothetical protein CBG06104 [Caenorhabditis briggsae]
(279 aa)

Score: 49 bits (116), Expect: 0.000132516
Length: 144, Idn/Pos/Gap = 38/64/13 (26%/44%/9%)

Query: 161 SLNFFLFFLMRKYRNPL-ERIFRLRLRRAETGATRALSFEMLNRQLVWEGFTELAISVIP 219
           SL  FL+FL     + L E I  LR          +++++  NR+L+W  F ++ +   P
Sbjct: 127 SLLHFLYFLRSGGHSTLTESILSLRNWNNHQPTISSVNYDNQNRELMWHAFRDVILLTYP 186

Query: 220 ILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKIRCRLCGKSRPLMPHILIPCRHLFC 279
            ++  +  R+++K     +FG       S      I C +C K   ++P I   C H+ C
Sbjct: 187 FIER-IRQRVVKKQKLVRKFG-------STIGGSDIECVVCDKP-AVIPMIGQKCGHVAC 237

Query: 280 YVCMAMKIRTNGSEGCPYCGSEFE 303
           Y C+A    +  S  C  C  + E
Sbjct: 238 YTCVAT---SGNSMTCSLCSEDKE 258



emb|CAA92640.1| Hypothetical protein ZK809.7 [Caenorhabditis elegans]
ref|NP_502201.1| PeRoXisome assembly factor PRX-2, peroxisomal membrane protein 3 (prx-2) [Caenorhabditis elegans]
pir||T28005 hypothetical protein ZK809.7 - Caenorhabditis elegans
(305 aa)

Score: 46 bits (109), Expect: 0.00104066
Length: 112, Idn/Pos/Gap = 29/52/13 (25%/46%/11%)

Query: 195 ALSFEMLNRQLVWEGFTELAISVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGK 254
           +++++  NR+L+W  F ++ +   P ++     RI++K           R+  S   S  
Sbjct: 194 SINYDTQNRELMWHAFRDVILLTYPFIEKA-RQRIVKKQKL-------DRKFTSSIGSSD 245

Query: 255 IRCRLCGKSRPLMPHILIPCRHLFCYVCMAMKIRTNGSEGCPYCGSEFERAE 306
           I C +C K   ++P +   C H+ CY C+A    T+ +  CP C    E  E
Sbjct: 246 IECVVCDKPS-VIPMVGQKCGHVACYTCIA----TSRNMTCPLCSENAEPME 292



emb|CAA65646.1| peroxin-2 [Pichia pastoris]
sp|Q01964|PEX2_PICPA Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal protein PER6)
(461 aa)

Score: 43 bits (101), Expect: 0.00873654
Length: 162, Idn/Pos/Gap = 35/63/33 (21%/38%/20%)

Query: 162 LNFFLFFLMRKYRNPLERIFRLRLRRAETGAT------RALSFEMLNRQLVWEGFTELAI 215
           +NF  F +   + +   RI  +R +   T           +S+E  NRQLVW   TE  +
Sbjct: 177 VNFVTFLVSGSFPDLTTRILNIRFKPLVTTQVAFASNPETISYEFQNRQLVWNTLTEFIV 236

Query: 216 SVIPILQSPLLHRILRKAVFHGRFGAASREVVSQEHSGKI-------RCRLC-------- 260
            ++P L  P   + L  ++     G + +     +   K+        C +C        
Sbjct: 237 FILPALSVPKFTKSLVSSI----TGTSPKSSQVTDEDLKVFSSLPERVCAICFQNSQNSD 292

Query: 261 --GKSRPLMPHILI------PCRHLFCYVCMAMKIRTNGSEG 294
              ++   +   L+       C H++CYVC+  K++    EG
Sbjct: 293 SGAQNDISLNDTLVTNPYETTCGHIYCYVCILSKLQIFKEEG 334