Cyanidioschyzon merolae Genome Project

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CMG145C (401 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)


PREDICTED: similar to nucleoporin like 2 [Rattus norvegicus]

unnamed protein product [Mus musculus]

unnamed protein product [Mus musculus]

Nupl2 protein [Mus musculus]

Makorin1 [Seriola quinqueradiata]

gene encoding protein featuring ring-finger [Seriola quinqueradiata]

Makorin RING zinc-finger protein 1 [Danio rerio]

Makorin1 [Seriola quinqueradiata]

makorin 1 [Macropus eugenii]

PREDICTED: hypothetical protein XP_540155 [Canis familiaris]

hypothetical protein F1B16.12 [imported] - Arabidopsis thaliana

nucleoporin like 2 [Mus musculus]

Mkrn2 protein [Danio rerio]
 
ref|XP_575328.1| PREDICTED: similar to nucleoporin like 2 [Rattus norvegicus]
(418 aa)

Score: 52 bits (124), Expect: 2.11612e-05
Length: 427, Idn/Pos/Gap = 100/165/45 (23%/38%/10%)

Query:   1 MVVCRYYLQGNCKFGDRCRYEHPPGLGGRASRQQVGPGMPAASGQAGFPASGLPTAGTPA  60
           M +C+++LQG C+FGDRC  EHP   G   +RQ      P + G            G  A
Sbjct:   1 MTICQFFLQGRCRFGDRCWNEHPGARGAAGARQPPPQQQPPSGGN---------RRGWNA  51

Query:  61 AGGGTWPAVTPNAFNMS---GGA------PYGVNDSARAPDRGAGSETNQGAG----RGN 107
                   + P++F+ S   GG+      P+G  DS  +  RG GS  N  A        
Sbjct:  52 GSQRYSNVIQPSSFSKSTPWGGSRGQDKPPFGPFDSGASTSRGFGSPQNPFASPLSDEQK 111

Query: 108 NQRKTLWDWWRE---GHESGVWPLSCYGNTYAKSSVKG-VDVSFEELRADAYAAVHFQGA 163
           +++K L    ++      SG W  S Y     K ++ G  D+S EELR + +  +     
Sbjct: 112 DEKKLLEGIVKDVEVWESSGQWMFSVYSPVRKKPNISGFTDISPEELRLEYHNFLTSNNL 171

Query: 164 -----SLAQIEAQEASRVHQA----LETAQQMLQ--RQAHRQASRTMQGMSTAPPAAFAT 212
                S+ Q+  Q  SR+++     + T   +L   + A  QA+    G  +     F +
Sbjct: 172 QSYLNSVQQLVNQWRSRINELKNLNMSTKGALLSDLKDAVSQAAPAF-GFGSKQAGTFGS 230

Query: 213 APQPMPSMSSAVNGAFSATGEKAPSTMTRFGTESMMMPSGSGKPPAMATASSFAHPENVS 272
              P+ + SS    +FS       +T     T         G  P+  +A S + P    
Sbjct: 231 PGFPVNNSSSTTVQSFSFKTSPGLATAPSGNTSVFGSHPAFGAGPSAGSAVSSSIPAFGL 290

Query: 273 GMYTGTSFQGAGAVPLNAPQNSLDMAQAYQSIVSPYGQPVEAPWSMAV--SAGAGFGEPT 330
           G    TS   A +    +P+ S   +  +    +P       P +     S+ A FG P+
Sbjct: 291 GKPEATS---AASFSFKSPEASSFGSPGFSGFPAPMATSPFGPATAPAFGSSVAAFGSPS 347

Query: 331 HRTNESISSMEMGAYPSNGNVEWQSSSGGTVPQQQQQQQQQQLSDQSAQAFAAEHFSRGA 390
             +    +      +   G+    S    + P       + QL+ +  + F ++ F+ G 
Sbjct: 348 PHSQTVFAKPCTDVF--GGSSISSSVPASSAPDNALFTPRDQLTKEELEQFQSQKFTLGK 405

Query: 391 VPETPPP 397
           +P  PPP
Sbjct: 406 IPLKPPP 412



dbj|BAC37297.1| unnamed protein product [Mus musculus]
(420 aa)

Score: 51 bits (121), Expect: 4.83371e-05
Length: 422, Idn/Pos/Gap = 98/157/33 (23%/37%/7%)

Query:   1 MVVCRYYLQGNCKFGDRCRYEHPPGLG-GRASRQQVGPGMPAASGQAGFPASGLPTAGTP  59
           M +C+++LQG C+FGDRC  EHP   G G A +       P+ + + G+ AS    +   
Sbjct:   1 MTICQFFLQGRCRFGDRCWNEHPGARGAGGARQPPPQQQPPSGNNRRGWNASSQRYSNVI  60

Query:  60 AAGGGTWPAVTP-NAFNMSGGAPYGVNDSARAPDRGAGSETNQGAG----RGNNQRKTLW 114
                ++P  TP          P+G  DS  +  RG GS  N  A        +++K L 
Sbjct:  61 QP--SSFPKSTPWGGSRDQDKPPFGSFDSGASTSRGFGSSQNPFASPLSDEQKDEKKLLE 118

Query: 115 DWWRE---GHESGVWPLSCYGNTYAKSSVKG-VDVSFEELRADAYAAVHFQG-ASLAQIE 169
              ++      SG W  S Y     K ++ G  D+S EELR + +  +      S     
Sbjct: 119 GIVKDVEVWESSGQWMFSVYSPVRKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSV 178

Query: 170 AQEASRVHQALETAQQMLQRQAHRQASRTMQGMSTAPPA---------AFATAPQPMPSM 220
            Q  S+    +   + +         S    G+S A PA         +F +   P+ + 
Sbjct: 179 QQLVSQWRNRINELKNLTMSTKGALLSDVKDGVSQAVPAFGFGSKQAGSFGSPGFPVNNS 238

Query: 221 SSAVNGAFSATGEKAPSTMTRFGTESMMMPSGSGKPPAMATASSFAHPENVSGMYTGTSF 280
           SS+    FS       +T     T         G  P+  ++ S + P    G    TS 
Sbjct: 239 SSSTVQNFSFKTSPGLATPPSGSTSVFGSHPAFGAGPSAGSSISSSTPAFGLGKPEATS- 297

Query: 281 QGAGAVPLNAPQNSLDMAQAYQSI-----VSPYGQPVEAPWSMAVSAGAGFGEPTHRTNE 335
             A +    +P+ S   +  +         SP G     P     S  AGFG P+  +  
Sbjct: 298 --AASFSFKSPEGSSFASPGFSGFPASMAASPSGSTTAPPLRSGSSV-AGFGSPSPHSQA 354

Query: 336 SISSMEMGAYPSNGNVEWQSSSGGTVPQQQQQQQQQQLSDQSAQAFAAEHFSRGAVPETP 395
             +      +  +G      +SG           + QL  +  + F ++ F+ G +P  P
Sbjct: 355 VFAKPSTDVFGGSGISTSVLTSGAA--DNALFTPRDQLMKEELEQFQSQRFTLGKIPLKP 412

Query: 396 PP 397
           PP
Sbjct: 413 PP 414



dbj|BAC36589.1| unnamed protein product [Mus musculus]
(236 aa)

Score: 50 bits (120), Expect: 7.33605e-05
Length: 169, Idn/Pos/Gap = 49/74/24 (28%/43%/14%)

Query:   1 MVVCRYYLQGNCKFGDRCRYEHPPGLG-GRASRQQVGPGMPAASGQAGFPASGLPTAGTP  59
           M +C+++LQG C+FGDRC  EHP   G G A +       P+ + + G+ AS    +   
Sbjct:   1 MTICQFFLQGRCRFGDRCWNEHPGARGAGGARQPPPQQQPPSGNNRRGWNASSQRYSNVI  60

Query:  60 AAGGGTWPAVTP-NAFNMSGGAPYGVNDSARAPDRGAGSETNQGAGRGNNQRK------- 111
                ++P  TP          P+G  DS  +  RG GS  N  A   ++++K       
Sbjct:  61 QP--SSFPKSTPWGGSRDQDKPPFGSFDSGASTSRGFGSSQNPFASPLSDEQKDEKKLLE 118

Query: 112 ------TLWDWWREGHESGVWPLSCYGNTYAKSSVKG-VDVSFEELRAD 153
                  +W+       SG W  S Y     K ++ G  D+S EELR +
Sbjct: 119 GIVKDVEVWE------SSGQWMFSAYSPVGKKPNISGFTDISPEELRLE 161



gb|AAH33270.1| Nupl2 protein [Mus musculus]
(420 aa)

Score: 49 bits (117), Expect: 0.000162072
Length: 422, Idn/Pos/Gap = 97/156/33 (22%/36%/7%)

Query:   1 MVVCRYYLQGNCKFGDRCRYEHPPGLG-GRASRQQVGPGMPAASGQAGFPASGLPTAGTP  59
           M +C+++LQG C+FGDRC  EHP   G G A +       P+ + + G+ AS    +   
Sbjct:   1 MTICQFFLQGRCRFGDRCWNEHPGARGAGGARQPPPQQQPPSGNNRRGWNASSQRYSNVI  60

Query:  60 AAGGGTWPAVTP-NAFNMSGGAPYGVNDSARAPDRGAGSETNQGAG----RGNNQRKTLW 114
                ++P  TP          P+G  DS  +  RG GS  N  A        +++K L 
Sbjct:  61 QP--SSFPKSTPWGGSRDQDKPPFGSFDSGASTSRGFGSSQNPFASPLSDEQKDEKKLLE 118

Query: 115 DWWRE---GHESGVWPLSCYGNTYAKSSVKG-VDVSFEELRADAYAAVHFQG-ASLAQIE 169
              ++      SG W  S Y     K ++ G  D+S EELR + +  +      S     
Sbjct: 119 GIVKDVEVWESSGQWMFSVYSPVRKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSV 178

Query: 170 AQEASRVHQALETAQQMLQRQAHRQASRTMQGMSTAPPA---------AFATAPQPMPSM 220
            Q  S+    +   + +         S    G+S A PA         +F +   P+ + 
Sbjct: 179 QQLVSQWRNRINELKNLTMSTKGALLSDVKDGVSQAVPAFGFGSKQAGSFGSPGFPVNNS 238

Query: 221 SSAVNGAFSATGEKAPSTMTRFGTESMMMPSGSGKPPAMATASSFAHPENVSGMYTGTSF 280
           SS+    FS       +T     T         G  P+  ++ S + P    G    TS 
Sbjct: 239 SSSTVQNFSFKTSPGLATPPSGSTSVFGSHPAFGAGPSAGSSISSSTPAFGLGKPEATS- 297

Query: 281 QGAGAVPLNAPQNSLDMAQAYQSI-----VSPYGQPVEAPWSMAVSAGAGFGEPTHRTNE 335
             A +    +P+ S   +  +         SP G     P     S   GFG P+  +  
Sbjct: 298 --AASFSFKSPEASSFASPGFSGFPASMAASPSGSTTAPPLRSGSSV-VGFGSPSPHSQA 354

Query: 336 SISSMEMGAYPSNGNVEWQSSSGGTVPQQQQQQQQQQLSDQSAQAFAAEHFSRGAVPETP 395
             +      +  +G      +SG           + QL  +  + F ++ F+ G +P  P
Sbjct: 355 VFAKPSTDVFGGSGISTSVLASGAA--DNALFTPRDQLMKEELEQFQSQRFTLGKIPLKP 412

Query: 396 PP 397
           PP
Sbjct: 413 PP 414



dbj|BAC98837.1| Makorin1 [Seriola quinqueradiata]
(418 aa)

Score: 48 bits (114), Expect: 0.000379595
Length: 82, Idn/Pos/Gap = 31/43/8 (37%/52%/9%)

Query:   2 VVCRYYLQGNCKFGDRCRYEH-PPGLGGRASRQQVGPGMPAASGQAGFPASGLPTAGTPA  60
           ++C+++ +GNC FGDRCR+EH  P         Q+ P +P+AS  AG P+   P+  TP 
Sbjct:  35 MICKFFQKGNCVFGDRCRFEHCKPAKNEELPAPQMLP-LPSAS-LAG-PSDPEPSGPTPV  91

Query:  61 AGGGTWPAVTPNAFNMSGGAPY  82
            G   W     NA     G PY
Sbjct:  92 PGAQDW----VNAAEFVPGQPY 109



dbj|BAB91215.2| gene encoding protein featuring ring-finger [Seriola quinqueradiata]
dbj|BAB91214.2| gene encoding protein featuring ring-finger [Seriola quinqueradiata]
(435 aa)

Score: 48 bits (113), Expect: 0.000412626
Length: 82, Idn/Pos/Gap = 31/43/8 (37%/52%/9%)

Query:   2 VVCRYYLQGNCKFGDRCRYEH-PPGLGGRASRQQVGPGMPAASGQAGFPASGLPTAGTPA  60
           ++C+++ +GNC FGDRCR+EH  P         Q+ P +P+AS  AG P+   P+  TP 
Sbjct:  52 MICKFFQKGNCVFGDRCRFEHCKPAKNEELPAPQMLP-LPSAS-LAG-PSDPEPSGPTPV 108

Query:  61 AGGGTWPAVTPNAFNMSGGAPY  82
            G   W     NA     G PY
Sbjct: 109 PGAQDW----VNAAEFVPGQPY 126



gb|AAG27598.1| Makorin RING zinc-finger protein 1 [Danio rerio]
(442 aa)

Score: 46 bits (109), Expect: 0.00145455
Length: 95, Idn/Pos/Gap = 31/41/24 (32%/43%/25%)

Query:   2 VVCRYYLQGNCKFGDRCRYEHPPGLGGRASRQQVGPGMPAASGQAGFPASGLPTAGTP--  59
           ++C+++ +G C FGDRCRYEH      + S+Q   P     S +   P +  P AGTP  
Sbjct:  54 MICKFFQKGCCAFGDRCRYEHT-----KPSKQDEVP-----SSKPSMPLTAAPLAGTPEP 103

Query:  60 ---AAGGGTWPAVTP---------NAFNMSGGAPY  82
                GG T     P         NA     G PY
Sbjct: 104 VSDGPGGTTGAQEKPQGSGAVDWVNAAEFVPGQPY 138



dbj|BAC99018.1| Makorin1 [Seriola quinqueradiata]
(418 aa)

Score: 46 bits (108), Expect: 0.00151651
Length: 82, Idn/Pos/Gap = 31/43/8 (37%/52%/9%)

Query:   2 VVCRYYLQGNCKFGDRCRYEH-PPGLGGRASRQQVGPGMPAASGQAGFPASGLPTAGTPA  60
           ++C+++ +GNC FGDRCR+EH  P         Q+ P +P+AS  AG P+   P+  TP 
Sbjct:  35 MICKFFQKGNCVFGDRCRFEHCKPAKNEELPAPQMLP-LPSAS-LAG-PSDPEPSGPTPV  91

Query:  61 AGGGTWPAVTPNAFNMSGGAPY  82
            G   W     NA     G PY
Sbjct:  92 PGAQDW----VNAAEFVPGQPY 109



gb|AAF17489.1| makorin 1 [Macropus eugenii]
sp|Q9TT91|MKRN1_MACEU Makorin 1
(478 aa)

Score: 46 bits (108), Expect: 0.00155495
Length: 80, Idn/Pos/Gap = 32/42/7 (40%/52%/8%)

Query:   2 VVCRYYLQGNCKFGDRCRYEHPPGLGGRASRQQVGPGMPAASGQAGFPA-SGLPTAGTPA  60
           +VCRYY +G C +GDRCRYEH   L     R++V     AA  ++  PA S LP    P 
Sbjct:  84 MVCRYYQRGCCAYGDRCRYEHTKPL----KREEVTAANLAA--KSDLPASSSLPALVEPL 137

Query:  61 AGGGTWPAVTPNAFNMSGGA  80
           A   T  A + N+   + GA
Sbjct: 138 AEVSTGEAESVNSNFAAAGA 157



ref|XP_540155.1| PREDICTED: hypothetical protein XP_540155 [Canis familiaris]
(1382 aa)

Score: 45 bits (107), Expect: 0.0020823
Length: 33, Idn/Pos/Gap = 18/26/3 (54%/78%/9%)

Query:   3 VCRYYLQGNCKFGDRCRYEH--PPG-LGGRASR  32
           +C++YL+GNCKFG RC+++H  PP  + GRA R
Sbjct: 299 ICKFYLKGNCKFGSRCKFKHEVPPNQIVGRAER 331



pir||H96783 hypothetical protein F1B16.12 [imported] - Arabidopsis thaliana
gb|AAG13074.1| Hypothetical protein [Arabidopsis thaliana]
(343 aa)

Score: 44 bits (104), Expect: 0.00548134
Length: 331, Idn/Pos/Gap = 73/132/43 (22%/39%/12%)

Query:   3 VCRYYLQGNCKFGDRCRYEHPPGLGGRASRQQVGPGMPAASGQ--------AGFPASGLP  54
           +CR + +G+C++G+ CR+ HP         QQ  P  P   G              S  P
Sbjct:   5 LCRNFQRGSCRYGENCRFLHP---------QQAKPNNPFGFGTQNQQQQQQQQQQNSSNP  55

Query:  55 TAGTPAAGGGTWPAVTPNAFNMSGGAPYGVNDSARAPDRGAGSETNQGAGRGNNQ---RK 111
                 +GG + P    N ++ +   P G    A A  +  G +T     +  +    ++
Sbjct:  56 FGFGVQSGGSSRPNQFQNTWSRTASTPTG--GGAAASTQQTGKQTQPADHKCTDPAACKR 113

Query: 112 TLWDWWREGHESGVWPLSCYGN-TYAKSSVKGVDVSFEELRADAYAAVHFQGASLAQIEA 170
            + D ++  +E  +W L+CYG+  Y    V G D+S+EELRA AY     +G  L  I  
Sbjct: 114 VMQDDFK--NERPMWKLTCYGHWKYFPCDVTG-DISYEELRAVAYEEAK-RGIPLQSIVE 169

Query: 171 QEASRVHQALETAQQMLQRQAHRQASRTMQGMSTAPPAAFATAPQ---PMP--------- 218
           +E +  +  +   +  L+       +      +   P+ F  + Q   P P         
Sbjct: 170 RERNLQNSKIAEFENFLRNPYKGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQQT 229

Query: 219 SMSSAVNGAFSATGEKAPSTMTRFGTESMMMPSGSGKPPAMATASSFAH-PENVSGMYTG 277
           + S+   G  S++G   P+    F  ++    + +G   +    + FA   +  +   T 
Sbjct: 230 AFSNTNAGGLSSSG--PPNAFASFNQQTTFPNTNAGGVSSSGPPNPFASFTQQSNNQQTA 287

Query: 278 TSFQGAGAV-PLNAPQNSLDMAQAYQSIVSP 307
            S   AG + P ++P +    A  ++S+  P
Sbjct: 288 FSNTNAGGLRPRDSPSSETSFANDHRSLWFP 318



ref|NP_694732.1| nucleoporin like 2 [Mus musculus]
dbj|BAB62307.1| nucleoporin-like protein-1 isoformT [Mus musculus]
(161 aa)

Score: 43 bits (102), Expect: 0.00838866
Length: 113, Idn/Pos/Gap = 35/54/4 (30%/47%/3%)

Query:   1 MVVCRYYLQGNCKFGDRCRYEHPPGLG-GRASRQQVGPGMPAASGQAGFPASGLPTAGTP  59
           M +C+++LQG C+FGDRC  EHP   G G A +       P+ + + G+ AS    +   
Sbjct:   1 MTICQFFLQGRCRFGDRCWNEHPGARGAGGARQPPPQQQPPSGNNRRGWNASSQRYSNVI  60

Query:  60 AAGGGTWPAVTP-NAFNMSGGAPYGVNDSARAPDRGAGSETNQGAGRGNNQRK 111
                ++P  TP          P+G  DS  +  RG GS  N  A   ++++K
Sbjct:  61 QP--SSFPKSTPWGGSRDQDKPPFGSFDSGASTSRGFGSSQNPFASPLSDEQK 111



gb|AAH65352.1| Mkrn2 protein [Danio rerio]
(414 aa)

Score: 43 bits (102), Expect: 0.00927206
Length: 30, Idn/Pos/Gap = 17/22/2 (56%/73%/6%)

Query:  3 VCRYYLQGNCKFGDRCRYEH--PPGLGGRA 30
          +C+YY +G C +GDRCRY+H  PPG G  A
Sbjct: 36 ICKYYQRGACAYGDRCRYDHIKPPGRGSGA 65