Cyanidioschyzon merolae Genome Project
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CML050C (520 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)
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ribonucleotide reductase R2 [Nicotiana tabacum] |
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putative ribonucleotide reductase R2 [Oryza sativa (japonica cultivar-group)] |
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putative ribonucleoside-diphosphate reductase [Oryza sativa (japonica cultivar-group)] |
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ribonucleotide reductase small subunit [Arabidopsis thaliana] |
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ribonucleotide reductase small subunit [Trypanosoma brucei] |
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ribonucleotide reductase (Class I) [Trypanosoma brucei brucei] |
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putative ribonucleotide reductase R2 [Oryza sativa (japonica cultivar-group)] |
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putative ribonucleotide reductase small subunit [Arabidopsis thaliana] |
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ribonucleotide reductase small subunit [Glycine max] |
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ribonucleotide reductase small subunit [Dictyostelium discoideum] |
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probable ribonucleoside-diphosphate reductase small chain [Parachlamydia sp. UWE25] |
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At3g23580/MDB19_7 [Arabidopsis thaliana] |
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ribonucleotide reductase M2 polypeptide [Danio rerio] |
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Ribonucleotide reductase M2 polypeptide [Danio rerio] |
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MGC52676 protein [Xenopus laevis] |
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Rrm2-prov protein [Xenopus tropicalis] |
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CG8975-PA [Drosophila melanogaster] |
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Rrm2-prov protein [Xenopus laevis] |
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ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - variola major virus |
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ribonucleotide reductase M2 subunit [Leishmania mexicana amazonensis] |
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unknown [Homo sapiens] |
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CPXV051 protein [Cowpox virus] |
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ribonucleotide reductase small subunit M2 [Leishmania mexicana amazonensis] |
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GA21447-PA [Drosophila pseudoobscura] |
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ribonucleotide reductase R2 [Arabidopsis thaliana] |
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RPXV032 [Rabbitpox virus] |
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ribonucleotide reductase small subunit; CMLV039 [Camelpox virus M-96] |
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PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible); p53-inducible ribonucleotide reductase small subunit 2 homolog [Gallus gallus] |
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ribonucleoside-diphosphate reductase [Vaccinia virus] |
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E4L protein [Variola minor virus] |
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hypothetical protein FG05409.1 [Gibberella zeae PH-1] |
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ribonucleotide reductase, small subunit [Vaccinia virus] |
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ribonucleotide reductase small subunit [Vaccinia virus] |
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hypothetical protein DKFZp761E1312.1 - human (fragment) |
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ribonucleotide reductase M2 [Mus musculus] |
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PREDICTED: ribonucleotide reductase M2 polypeptide [Pan troglodytes] |
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hypothetical protein [Homo sapiens] |
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EVM028 [Ectromelia virus] |
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hypothetical protein [Pongo pygmaeus] |
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C8L [Variola virus] |
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C8L [Variola virus] |
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ribonucleotide reductase M2 subunit [Leishmania mexicana amazonensis] |
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SPV016 ribonucleotide reductase, small subunit [Swinepox virus] |
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ENSANGP00000013211 [Anopheles gambiae str. PEST] |
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unnamed protein product [Homo sapiens] |
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C8L product [variola virus VAR, India-1967, Peptide, 333 aa] |
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G4L protein [Cowpox virus] |
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unnamed protein product [Yarrowia lipolytica CLIB99] |
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small subunit of ribonucleotide reductase [Neurospora crassa] |
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PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) [Gallus gallus] |
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F14 [Vaccinia virus] |
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ENSANGP00000023621 [Anopheles gambiae str. PEST] |
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Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) |
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ribonuleotide reductase small subunit |
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M2 (small) subunit of ribonucleotide reductase [Spisula solidissima] |
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MPXV-WRAIR030 [Monkeypox virus] |
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ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] |
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TF4L [Vaccinia virus (strain Tian Tan)] |
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PREDICTED: similar to M2 ribonucleotide reductase [Rattus norvegicus] |
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hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4] |
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COG0208: Ribonucleotide reductase, beta subunit [Cytophaga hutchinsonii] |
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unnamed protein product [Debaryomyces hansenii CBS767] |
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ribonucleotide reductase [Emericella nidulans] |
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ribonucleotide reductase 2 [Aedes aegypti] |
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ribonucleotide reductase small subunit [Lentinula edodes] |
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ribonucleotide reductase [Mesocricetus auratus] |
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Hypothetical protein MGC75900 [Xenopus tropicalis] |
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MGC78958 protein [Xenopus laevis] |
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PREDICTED: hypothetical protein XP_540076 [Canis familiaris] |
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similar to ENSANGP00000013211 [Apis mellifera] |
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hypothetical protein CaO19.5801 [Candida albicans SC5314] |
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20L protein [Yaba-like disease virus] |
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ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - malaria parasite (Plasmodium falciparum) |
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ribonucleotide reductase small subunit [Plasmodium falciparum 3D7] |
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unnamed protein product [Kluyveromyces lactis NRRL Y-1140] |
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ribonucleotide reductase R2 subunit [Plasmodium falciparum] |
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novel protein similar to ribonucleotide reductase protein r2 class I (rrm2, ZDB-GENE-990415-25) [Danio rerio] |
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PREDICTED: similar to M2 ribonucleotide reductase [Rattus norvegicus] |
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hypothetical protein [Homo sapiens] |
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ribonucleotide reductase R2 subunit [Aedes albopictus] |
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ribonucleotide reductase |
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AAL136Cp [Ashbya gossypii ATCC 10895] |
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20L [Yaba monkey tumor virus] |
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PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) [Canis familiaris] |
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small subunit (P41) [Spisula solidissima] |
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ribonucleotide reductase, small subunit [Myxoma virus] |
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ribonucleotide reductase small subunit [lumpy skin disease virus] |
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Ribonucleotide reductase, small subunit [Sheeppox virus] |
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Ribonucleotide reductase small subunit [Deerpox virus] |
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ribonucleotide reductase small subunit homolog; RR2B [Spodoptera litura nucleopolyhedrovirus] |
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ribonucleotide reductase R2 subunit |
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gp015L [Rabbit fibroma virus] |
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ribonucleoside reductase [lumpy skin disease virus] |
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hypothetical protein CaO19.9424 [Candida albicans SC5314] |
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hypothetical protein MG06408.4 [Magnaporthe grisea 70-15] |
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hypothetical protein CNBK0970 [Cryptococcus neoformans var. neoformans B-3501A] |
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ribonucleotide reductase small subunit [lumpy skin disease virus] |
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CNPV236 ribonucleotide reductase small subunit [Canarypox virus] |
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Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii] |
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ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - Atlantic surf clam (fragment) |
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ribonucleotide reductase small subunit, putative [Plasmodium chabaudi] |
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unnamed protein product [Candida glabrata CBS138] |
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hypothetical protein UM06368.1 [Ustilago maydis 521] |
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Hypothetical protein CBG20205 [Caenorhabditis briggsae] |
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ribonucleotide reductase small subunit homolog [Lymantria dispar nucleopolyhedrovirus] |
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suc22 [Schizosaccharomyces pombe] |
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Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens] |
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unnamed protein product [Tetraodon nigroviridis] |
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ribonucleotide reductase, small subunit [Schizosaccharomyces pombe] |
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Rr2 [Heliothis zea virus 1] |
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Hypothetical protein C03C10.3 [Caenorhabditis elegans] |
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PREDICTED: similar to p53-inducible ribonucleotide reductase small subunit 2 long form [Pan troglodytes] |
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PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) [Bos taurus] |
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Chain A, Ribonucleotide Reductase Y2y4 Heterodimer |
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ribonucleotide reductase R2 subunit [Cryptosporidium parvum] |
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hypothetical protein CNBK2010 [Cryptococcus neoformans var. neoformans B-3501A] |
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RNR2 [Saccharomyces cerevisiae] |
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ribonucleotide reductase R2 subunit [Cryptosporidium hominis] |
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RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon cuniculi GB-M1] |
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ribonucleotide reductase subunit 2 (RNR2) |
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contains ribonucleotide reductase (RR) signature; similar to tobacco RR small subunit, corresponds to Swiss-Prot Accession Number P49730 [Paramecium bursaria Chlorella virus 1] |
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unnamed protein product [Tetraodon nigroviridis] |
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ribonucleotide reductase |
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PREDICTED: similar to Ribonucleotide reductase M2 B (TP53 inducible) [Rattus norvegicus] |
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putative ribonucleotide reductase small subunit [infectious spleen and kidney necrosis virus] |
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ribonucleotide reductase small subunit [Red sea bream iridovirus] |
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ribonucleotide reductase small chain [Rock bream iridovirus] |
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putative ribonucleotide reductase small subunit-like protein [Mamestra configurata nucleopolyhedrovirus A] |
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ribonucleotide reductase small subunit [shrimp white spot syndrome virus] |
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WSSV243 [shrimp white spot syndrome virus] |
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ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera exigua nucleopolyhedrovirus] |
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putative ribonucleotide reductase small subunit-like protein [Mamestra configurata nucleopolyhedrovirus B] |
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EsV-1-128 [Ectocarpus siliculosus virus] |
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ribonucleoside-diphosphate reductase small subunit |
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RR2 protein [Shrimp white spot syndrome virus] |
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ribonucleotide reductase small subunit [Acanthamoeba polyphaga mimivirus] |
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FirrV-1-A19 [Feldmannia irregularis virus a] |
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ribonucleotide reductase R2 subunit variant [Aedes albopictus] |
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putative ribonucleoside-diphosphate reductase small chain [Arabidopsis thaliana] |
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YGR180C [Saccharomyces cerevisiae] |
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RNR4 [Saccharomyces cerevisiae] |
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ribonucleoside-diphosphate reductase R2 [Hyacinthus orientalis] |
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unnamed protein product [Tetraodon nigroviridis] |
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unnamed protein product [Candida glabrata CBS138] |
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Hypothetical protein F19G12.2 [Caenorhabditis elegans] |
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Similar to ribonucleotide reductase protein r2 class I [Homo sapiens] |
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putative ribonucleotide reductase small subunit [Sphaerechinus granularis] |
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ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - African swine fever virus (strain Malawi LIL20/1) |
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ribonucleotide reductase small subunit [African swine fever virus] |
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ribonucleotide reductase small subunit, putative [Plasmodium berghei] |
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ribonucleotide-diphosphate reductase small chain [Bdellovibrio bacteriovorus HD100] |
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putative ribonucleoside-diphosphate reductase beta chain [Streptomyces avermitilis MA-4680] |
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unnamed protein product [Tetraodon nigroviridis] |
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ribonucleotide-diphosphate reductase small chain [Streptomyces jumonjinensis] |
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ribonucleotide-diphosphate reductase small chain [Streptomyces coelicolor A3(2)] |
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ribonucleotide-diphosphate reductase small subunit chain [Streptomyces clavuligerus] |
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hypothetical protein DDB0184057 [Dictyostelium discoideum] |
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ribonucleotide-diphosphate reductase small chain [Streptomyces microflavus] |
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similar to Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] |
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PREDICTED: similar to hypothetical protein, partial [Bos taurus] |
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NrdA [Halobacterium sp. NRC-1] |
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p53-inducible ribonucleotide reductase small subunit 2 short form gamma [Homo sapiens] |
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hypothetical protein [Legionella pneumophila str. Lens] |
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hypothetical protein [Legionella pneumophila str. Paris] |
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ribonucleoside-diphosphate reductase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
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similar to ribonucleotide reductase [Mus musculus] |
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ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 493] |
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ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440] |
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PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible), partial [Bos taurus] |
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ribonucleoside reductase, small chain [Pseudomonas aeruginosa PAO1] |
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COG0208: Ribonucleotide reductase, beta subunit [Pseudomonas fluorescens PfO-1] |
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COG0208: Ribonucleotide reductase, beta subunit [Pseudomonas syringae pv. syringae B728a] |
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ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter sp. ADP1] |
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COG0208: Ribonucleotide reductase, beta subunit [Azotobacter vinelandii] |
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ribonucleoside-diphosphate reductase, beta subunit [Methylococcus capsulatus str. Bath] |
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ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] |
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ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative [Arabidopsis thaliana] |
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COG0208: Ribonucleotide reductase, beta subunit [Mesorhizobium sp. BNC1] |
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ribonucleoside-diphosphate reductase system [Chromobacterium violaceum ATCC 12472] |
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ribonucleoside-diphosphate reductase beta chain [Bordetella parapertussis 12822] |
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COG0208: Ribonucleotide reductase, beta subunit [Burkholderia fungorum LB400] |
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ribonucleoside-diphosphate reductase beta chain [Burkholderia pseudomallei K96243] |
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Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718] |
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COG0208: Ribonucleotide reductase, beta subunit [Burkholderia cepacia R18194] |
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COG0208: Ribonucleotide reductase, beta subunit [Burkholderia cepacia R1808] |
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COG0208: Ribonucleotide reductase, beta subunit [Rubrivivax gelatinosus PM1] |
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COG0208: Ribonucleotide reductase, beta subunit [Microbulbifer degradans 2-40] |
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COG0208: Ribonucleotide reductase, beta subunit [Ralstonia eutropha JMP134] |
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COG0208: Ribonucleotide reductase, beta subunit [Thiobacillus denitrificans ATCC 25259] |
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COG0208: Ribonucleotide reductase, beta subunit [Ralstonia metallidurans CH34] |
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PUTATIVE TRANSMEMBRANE RIBONUCLEOSIDE REDUCTASE (SMALL CHAIN) OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum] |
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COG0208: Ribonucleotide reductase, beta subunit [Polaromonas sp. JS666] |
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COG0208: Ribonucleotide reductase, beta subunit [Thermobifida fusca] |
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Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis D/UW-3/CX] |
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UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5] |
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ribonucleotide reductase R2 subunit [Plasmodium yoelii] |
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ribonucleoside-diphosphate reductase, beta subunit [Chlamydia muridarum Nigg] |
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ribonucleotide reductase small subunit [Feline herpesvirus 1] |
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putative ibonucleoside reductase small subunit [Chlamydophila abortus S26/3] |
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ribonucleoside reductase small chain [Chlamydophila pneumoniae TW-183] |
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ribonucleoside reductase, small chain [Chlamydophila pneumoniae J138] |
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ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila caviae GPIC] |
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ribonucleotide reductase small subunit, putative [Plasmodium falciparum 3D7] |
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unknown [Schistosoma japonicum] |
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ribonucleotide reductase small subunit [Gallid herpesvirus 1] |
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UL40 [Bovine herpesvirus 1] |
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ribonucleotide reductase, putative [Plasmodium yoelii yoelii] |
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ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1] |
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UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus 1] |
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BaRF1 [Cercopithecine herpesvirus 15] |
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ribonucleotide reductase small subunit [Gallid herpesvirus 2] |
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ribonucleotide reductase small subunit [Gallid herpesvirus 2] |
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small subunit of ribonucleotide reductase [Cercopithecine herpesvirus 1] |
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unknown [Psittacid herpesvirus 1] |
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unnamed protein product [Human herpesvirus 4] |
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ribonucleotide reductase beta chain [Tropheryma whipplei str. Twist] |
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ribonucleotide reductase small subunit, putative [Plasmodium berghei] |
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small subunit of ribonucleotide reductase; RR2 [Suid herpesvirus 1] |
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ribonucleotide reductase small subunit |
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ORF54 [Callitrichine herpesvirus 3] |
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COG0208: Ribonucleotide reductase, beta subunit [Microbulbifer degradans 2-40] |
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ribonucleotide reductase RR2 [Equid herpesvirus 1] |
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20 [Equid herpesvirus 4] |
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unnamed protein product [Tetraodon nigroviridis] |
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ribonucleoside-diphosphate reductase, beta subunit [Caulobacter crescentus CB15] |
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UL40 product homolog [Marek's disease virus serotype 2 MDV2] |
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ribonucleoside-diphosphate reductase; ribonucleotide reductase small subunit [Equine herpesvirus 4] |
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hypothetical protein FTT0532 [synthetic construct] |
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Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis Schu 4] |
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ribonucleotide reductase (small subunit) [Human herpesvirus 3 (strain Dumas)] |
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ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli subsp. xyli str. CTCB07] |
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hypothetical protein PC000956.02.0 [Plasmodium chabaudi] |
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ORF20 [Ostreid herpesvirus 1] |
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ribonucleoside-diphosphate reductase beta chain [Propionibacterium acnes KPA171202] |
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ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] |
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ribonucleotide reductase, small subunit [Murid herpesvirus 4] |
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ribonucleotide reductase, small subunit [Cercopithecine herpesvirus 7] |
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ORF 60, ribonucleotide reductase small subunit homolog [Human herpesvirus 8] |
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ribonucleotide reductase small subunit [Bovine herpesvirus 4] |
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small ribonucleotide reductase [Cercopithecine herpesvirus 17] |
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small ribonuclease reductase [Macaca mulatta rhadinovirus 26-95] |
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ribonucleotide reductase, small subunit [Equid herpesvirus 2] |
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JM118 [Macaca fuscata rhadinovirus] |
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ribonucleotide reductase small subunit [Human herpesvirus 1] |
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COG0208: Ribonucleotide reductase, beta subunit [Rhodospirillum rubrum] |
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ribonucleoside-diphosphate reductase beta subunit [Clostridium perfringens str. 13] |
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UL40 [Human herpesvirus 1] |
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UL40 [Human herpesvirus 1] |
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Ribonucleotide reductase beta subunit [Clostridium acetobutylicum ATCC 824] |
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UL40 [Human herpesvirus 1] |
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UL40 [Human herpesvirus 1] |
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Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] |
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UL40 [Human herpesvirus 1] |
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UL40 [Human herpesvirus 1] |
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UL40 [Human herpesvirus 1] |
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UL40 [Human herpesvirus 1] |
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ribonucleotide reductase beta subunit [Erythrobacter litoralis HTCC2594] |
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unknown protein |
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UL40 [Human herpesvirus 1] |
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UL40 [Human herpesvirus 1] |
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ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC 51449] |
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UL40 [Human herpesvirus 1] |
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ribonucleotide reductase small subunit [Human herpesvirus 2] |
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unnamed protein product [Human herpesvirus 2] |
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small subunit of ribonucleotide reductase [Cercopithecine herpesvirus 2] |
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UL40 [Human herpesvirus 1] |
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COG0208: Ribonucleotide reductase, beta subunit [Novosphingobium aromaticivorans DSM 12444] |
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ribonucleotide reductase small subunit [human herpesvirus 2 (strain G)] |
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hypothetical protein PC302623.00.0 [Plasmodium chabaudi] |
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ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium japonicum USDA 110] |
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ribonucleotide reductase beta subunit [Zymomonas mobilis subsp. mobilis ZM4] |
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Ribonucleoside-diphosphate reductase beta chain [Gluconobacter oxydans 621H] |
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ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale str. St. Maries] |
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ribonucleoside-diphosphate reductase, beta subunit [Campylobacter upsaliensis RM3195] |
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RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia prowazekii str. Madrid E] |
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ribonucleotide reductase small subunit [Bovine herpesvirus 2] |
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COG0208: Ribonucleotide reductase, beta subunit [Crocosphaera watsonii WH 8501] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] [Rickettsia conorii str. Malish 7] |
|
|
|
UL40 [Human herpesvirus 2] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Campylobacter lari RM2100] |
|
|
|
ribonucleoside-diphosphate reductase, subunit beta (nrdB) [Treponema pallidum subsp. pallidum str. Nichols] |
|
|
|
small subunit of ribonucleotide reductase [Ateline herpesvirus 3] |
|
|
|
Ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Rickettsia akari str. Hartford] |
|
|
|
ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2] |
|
|
|
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter pylori J99] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 1/2a F6854] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Treponema denticola ATCC 35405] |
|
|
|
ribonucleoside diphosphate reductase, beta subunit (nrdB) [Helicobacter pylori 26695] |
|
|
|
RRsmall [Saimiriine herpesvirus 2] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Campylobacter coli RM2228] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b F2365] |
|
|
|
hypothetical protein lin2258 [Listeria innocua Clip11262] |
|
|
|
hypothetical protein lmo2154 [Listeria monocytogenes EGD-e] |
|
|
|
ribonucleotide reductase small subunit [Cryptosporidium hominis] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Ehrlichia canis str. Jake] |
|
|
|
376L [Chilo iridescent virus] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] |
|
|
|
Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] |
|
|
|
ribonucleoside-diphosphate reductase beta subunit [Geobacillus kaustophilus HTA426] |
|
|
|
Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Gardel] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni RM1221] |
|
|
|
putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] |
|
|
|
ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis YCH46] |
|
|
|
ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis] |
|
|
|
putative ribonucleoside-diphosphate reductase beta chain [Bacteroides fragilis NCTC 9343] |
|
|
|
ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium thermophilum IAM 14863] |
|
|
|
ribonucleotide reductase small subunit [Rickettsia rickettsii] |
|
|
|
Ribonucleotide reductase [Lymphocystis disease virus - isolate China] |
|
|
|
hypothetical protein slr0591 [Synechocystis sp. PCC 6803] |
|
|
|
Ribonucleotide reductase small subunit [Lymphocystis disease virus 1] |
|
|
|
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella succinogenes DSM 1740] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Xanthomonas axonopodis pv. citri str. 306] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] |
|
|
|
ribonucleotide reductase beta subunit [Grouper iridovirus] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Xylella fastidiosa Dixon] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Exiguobacterium sp. 255-15] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Xylella fastidiosa Ann-1] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa 9a5c] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] |
|
|
|
ribonucleoside-diphosphate reductase beta subunit [Singapore grouper iridovirus] |
|
|
|
ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus iheyensis HTE831] |
|
|
|
ribonucleoside-diphosphate reductase beta subunit [Bacillus halodurans C-125] |
|
|
|
Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli |
|
|
|
Chain B, Protein R2 Of Ribonucleotide Reductase (E.C.1.17.4.1) |
|
|
|
p53-inducible ribonucleotide reductase small subunit 2 short form beta [Homo sapiens] |
|
|
|
Chain B, Protein R2 Of Ribonucleotide Reductase (E.C.1.17.4.1) Mutant With Phe 208 Replaced By Tyr (F208y) Then Converted To Dopa (Dihydroxy Phenylalanine) |
|
|
|
NrdB [Cyanophage P-SSM4] |
|
|
|
PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) [Bos taurus] |
|
|
|
Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With Ferrous Ions At Neutral Ph |
|
|
|
putative ribonucleoside diphosphate reductase I beta chain [Neisseria gonorrhoeae FA 1090] |
|
|
|
ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 301] |
|
|
|
ribonucleoside-diphosphate reductase 1, beta subunit [Escherichia coli K12] |
|
|
|
Chain B, High Resolution Structure Of Ribonucleotide Reductase R2 From E. Coli In Its Oxidised (Met) Form |
|
|
|
Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli CFT073] |
|
|
|
Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR] |
|
|
|
Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e Mutant Of The R2 Subunit Of E. Coli Ribonucleotide Reductase) |
|
|
|
Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Enterococcus faecium] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Psychrobacter sp. 273-4] |
|
|
|
unknown [Ambystoma tigrinum stebbensi virus] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9241] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus ZK] |
|
|
|
nrdB [Salmonella typhimurium] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi Ty2] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. 'Ames Ancestor'] |
|
|
|
Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus RIMD 2210633] |
|
|
|
Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide Reductase R2 Protein From E. Coli |
|
|
|
Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia Coli |
|
|
|
putative ribonucleoside-diphosphate reductase beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis MC58] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide reductase 1) (B2 protein) (R2 protein) [Photorhabdus luminescens subsp. laumondii TTO1] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Vibrio fischeri ES114] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] |
|
|
|
ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis Z2491] |
|
|
|
putative aerobic ribonucleoside diphosphate reductase, small subunit [Bacteriophage T5] |
|
|
|
Ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] |
|
|
|
Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 14579] |
|
|
|
Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS Ions At Ph 5 |
|
|
|
putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis] |
|
|
|
ribonucleotide reductase B subunit [Bacteriophage S-PM2] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus ATCC 10987] |
|
|
|
ribonucleotide reductase small subunit [Rana grylio virus 9506] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Shewanella oneidensis MR-1] |
|
|
|
ribonucleoside diphosphate reductase beta subunit-like protein [Frog virus 3] |
|
|
|
Ribonucleotide reductase, beta subunit [Vibrio vulnificus CMCP6] |
|
|
|
Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of Ribonucleotide Reductase |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Rickettsia rickettsii] |
|
|
|
ribonucleotide reductase small subunit, putative [Plasmodium chabaudi] |
|
|
|
ORF025 [Staphylococcus phage Twort] |
|
|
|
Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of Ribonucleotide Reductase |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Bacillus clausii KSM-K16] |
|
|
|
Nonessential ribonucleoside-diP reductase 2, subunit beta, class I, function unknown [Streptococcus pneumoniae R6] |
|
|
|
ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus pneumoniae TIGR4] |
|
|
|
putative ribonucleoside-diphosphate reductase, beta subunit [Photobacterium profundum SS9] |
|
|
|
Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant E238a |
|
|
|
ribonucleoside-diphosphate reductase beta subunit-like protein [Rana tigrina ranavirus] |
|
|
|
ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia pestis KIM] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Bp (Baizongia pistaciae)] |
|
|
|
ribonucleoside diphosphate reductase small subunit [Corynebacterium ammoniagenes] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Pseudomonas syringae pv. syringae B728a] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pseudotuberculosis IP 32953] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] |
|
|
|
NrdG [Mycobacterium avium subsp. paratuberculosis str. k10] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain [Erwinia carotovora subsp. atroseptica SCRI1043] |
|
|
|
ribonucleotide reductase subunit R2F [Corynebacterium ammoniagenes] |
|
|
|
putative ribonucleotide reductase minor subunit [Staphylococcus phage K] |
|
|
|
ribonucleoside-diphosphate reductase 1 beta chain [Candidatus Blochmannia floridanus] |
|
|
|
ribonucleoside-diphosphate reductase, beta chain [Haemophilus ducreyi 35000HP] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Streptococcus suis 89/1591] |
|
|
|
ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide reductase 2) (R2f protein) [Photorhabdus luminescens subsp. laumondii TTO1] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Methylobacillus flagellatus KT] |
|
|
|
ribonucleoside-diphosphate reductase, beta chain [Deinococcus radiodurans R1] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Haemophilus somnus 2336] |
|
|
|
ribonucleoside diphosphate reductase beta chain [Haemophilus influenzae Rd KW20] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Lactococcus lactis subsp. cremoris SK11] |
|
|
|
Ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS10394] |
|
|
|
ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium diphtheriae NCTC 13129] |
|
|
|
ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O1 biovar eltor str. N16961] |
|
|
|
ribonucleoside-diphosphate reductase 2, beta subunit [Enterococcus faecalis V583] |
|
|
|
putative ribonucleotide diphosphate reductase, small subunit [Streptococcus pyogenes SSI-1] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Streptococcus pyogenes M49 591] |
|
|
|
NrdB [Pasteurella multocida subsp. multocida str. Pm70] |
|
|
|
Unknown [Streptococcus agalactiae NEM316] |
|
|
|
ribonucleotide reductase small subunit [Mycobacterium leprae TN] |
|
|
|
ribonucleotide diphosphate reductase beta subunit [Streptococcus thermophilus CNRZ1066] |
|
|
|
NrdF protein [Mannheimia succiniciproducens MBEL55E] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis subsp. lactis Il1403] |
|
|
|
ribonucleoside-diphosphate reductase (minor subunit) [Bacillus licheniformis ATCC 14580] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus MRSA252] |
|
|
|
ribonucleotide reductase beta chain [Aquifex aeolicus VF5] |
|
|
|
putative ribonucleotide reductase, small subunit [Streptococcus mutans UA159] |
|
|
|
ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] |
|
|
|
putative ribonucleoside-diphosphate reductase beta subunit [Nocardia farcinica IFM 10152] |
|
|
|
NrdF [Mycoplasma gallisepticum R] |
|
|
|
ribonucleoside-diphosphate reductase 2 beta chain [Erwinia carotovora subsp. atroseptica SCRI1043] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] |
|
|
|
ribonucleoside-diphosphate reductase, beta chain [Lactobacillus plantarum WCFS1] |
|
|
|
ribonucleoside-diphosphate reductase [Salmonella typhimurium] |
|
|
|
ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Typhi Ty2] |
|
|
|
ribonucleoside-diphosphate reductase (minor subunit) [Bacillus subtilis subsp. subtilis str. 168] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Pediococcus pentosaceus ATCC 25745] |
|
|
|
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Brucella melitensis 16M] |
|
|
|
hypothetical protein AGR_C_107 [Agrobacterium tumefaciens str. C58] |
|
|
|
ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium tumefaciens str. C58] |
|
|
|
ribonucleotide reductase beta subunit [Onion yellows phytoplasma OY-M] |
|
|
|
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium tuberculosis H37Rv] |
|
|
|
putative ribonucleotide reductase [Corynebacterium efficiens YS-314] |
|
|
|
NrdF, ribonucleoside-diphosphate reductase, beta subunit [Brucella abortus biovar 1 str. 9-941] |
|
|
|
ribonucleotide reductase beta chain [Corynebacterium efficiens YS-314] |
|
|
|
aerobic ribonucleoside diphosphate reductase small subunit [Bacteriophage KVP40] |
|
|
|
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium tuberculosis H37Rv] |
|
|
|
Ribonuleotide reductase small subunit, probable (nrdB) [Sulfolobus solfataricus P2] |
|
|
|
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium bovis AF2122/97] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Mycoplasma hyopneumoniae 232] |
|
|
|
ribonucleotide reductase R2-1 small subunit [Mycobacterium tuberculosis] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Haemophilus influenzae 86-028NP] |
|
|
|
Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] |
|
|
|
ribonucleotide reductase beta-chain [Corynebacterium glutamicum] |
|
|
|
ribonucleoside-diphosphate reductase minor subunit [Staphylococcus epidermidis ATCC 12228] |
|
|
|
yosP [Bacillus subtilis subsp. subtilis str. 168] |
|
|
|
ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium longum NCC2705] |
|
|
|
ribonucleotide reductase beta-chain 1 [Corynebacterium diphtheriae NCTC 13129] |
|
|
|
ribonucleotide diphosphate reductase subunit beta [Mycoplasma penetrans HF-2] |
|
|
|
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN [Corynebacterium glutamicum ATCC 13032] |
|
|
|
COG0208: Ribonucleotide reductase, beta subunit [Bifidobacterium longum DJO10A] |
|
|
|
Ribonucleotide reductase beta-chain [Bartonella henselae str. Houston-1] |
|
|
|
ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 2a str. 301] |
|
|
|
ribonucleoside-diphosphate reductase 2, beta chain, frag [Escherichia coli K12] |
|
|
|
ribonucleoside-diphosphate reductase 2, beta chain [Escherichia coli O157:H7 EDL933] |
|
|
|
ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pseudotuberculosis IP 32953] |
|
|
|
Ribonucleotide reductase beta-chain [Bartonella quintana str. Toulouse] |
|
|
|
Ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli CFT073] |
|
|
|
ribonucleoside reductase beta subunit [Borrelia hermsii] |
|
|
|
ribonucleoside-diphosphate reductase 2 beta chain [Mycoplasma mycoides subsp. mycoides SC str. PG1] |
|
|
|
ribonucleoside-diphosphate reductase beta chain [Mesoplasma florum L1] |
emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum] pir||T03688 ribonucleoside-diphosphate reductase (EC 1.17.4.1) chain R2 - common tobacco sp|P49730|RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (R2 subunit) (329 aa) Score: 464 bits (1195), Expect: 2.31056e-129 Length: 322, Idn/Pos/Gap = 220/264/7 (68%/81%/2%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A DR+ +FPI++P+I+E YK+ +ASFWTAEE+DL++D HW LT ER+F++HVLA Sbjct: 11 ASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWET-LTPGERHFITHVLA 69 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIVLENLA RFM++V++ EAR FYGFQIA+ENIHSE YSLL+++Y+KD +E++ Sbjct: 70 FFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDEKSR 129 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LFRA+ET PCV +KA WA+RWI +F ERLVAFA VEGIFFSGSFCAIFWLKKRGLMP Sbjct: 130 LFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMP 189 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLHCDFAC LYS+L ++ ER+ ++ DAVE E+EFVCDALP + Sbjct: 190 GLTFSNELISRDEGLHCDFACLLYSLL--RTKLTEERVKGIVADAVEIEREFVCDALPCA 247 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LMS YIEFVADRLL LGYD+L+N NPFDWMELISLQGKTNFFEKRVGEYQK Sbjct: 248 LVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEKRVGEYQK 307 Query: 503 ANVTTSATDN----VFALDIEF 520 A+V +S N F LD +F Sbjct: 308 ASVMSSLNGNGATHEFKLDEDF 329
ref|XP_550581.1| putative ribonucleotide reductase R2 [Oryza sativa (japonica cultivar-group)] dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa (japonica cultivar-group)] (345 aa) Score: 459 bits (1181), Expect: 9.00526e-128 Length: 323, Idn/Pos/Gap = 218/267/7 (67%/82%/2%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 AE +DR+++FPI++P+I+EFYK+ VASFWTAEE+DL+AD HW L+ ER+FVSHVLA Sbjct: 25 AESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFVSHVLA 84 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIVLENLA RFM DV++ EAR FYGFQIA+ENIHSE YSLL++ Y++D E+ Sbjct: 85 FFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDVEKDR 144 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LFRA++T+P VRRKA WA+RWI F ERLVAFA VEGIFFSGSFCAIFWLKKRGLMP Sbjct: 145 LFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMP 204 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLHCDFAC LY +L ++ R+ ++ DAV+ E+EFVCDALPV+ Sbjct: 205 GLTFSNELISRDEGLHCDFACLLYDLLRG--KLDESRVQEIVADAVDIEREFVCDALPVA 262 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN +LMS YIEFVADRLL+ LG +++N NPFDWMELISLQGKTNFFEKRVG+YQK Sbjct: 263 LVGMNGELMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGDYQK 322 Query: 503 ANVTTS-----ATDNVFALDIEF 520 A+V +S + ++VF++D +F Sbjct: 323 ASVMSSLNGGASCNHVFSIDEDF 345
ref|NP_910365.1| putative ribonucleoside-diphosphate reductase [Oryza sativa (japonica cultivar-group)] (327 aa) Score: 459 bits (1180), Expect: 1.05523e-127 Length: 323, Idn/Pos/Gap = 218/267/7 (67%/82%/2%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 AE +DR+++FPI++P+I+EFYK+ VASFWTAEE+DL+AD HW L+ ER+FVSHVLA Sbjct: 7 AESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFVSHVLA 66 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIVLENLA RFM DV++ EAR FYGFQIA+ENIHSE YSLL++ Y++D E+ Sbjct: 67 FFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDVEKDR 126 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LFRA++T+P VRRKA WA+RWI F ERLVAFA VEGIFFSGSFCAIFWLKKRGLMP Sbjct: 127 LFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMP 186 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLHCDFAC LY +L ++ R+ ++ DAV+ E+EFVCDALPV+ Sbjct: 187 GLTFSNELISRDEGLHCDFACLLYDLLRG--KLDESRVQEIVADAVDIEREFVCDALPVA 244 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN +LMS YIEFVADRLL+ LG +++N NPFDWMELISLQGKTNFFEKRVG+YQK Sbjct: 245 LVGMNGELMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGDYQK 304 Query: 503 ANVTTS-----ATDNVFALDIEF 520 A+V +S + ++VF++D +F Sbjct: 305 ASVMSSLNGGASCNHVFSIDEDF 327
gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana] (333 aa) Score: 458 bits (1179), Expect: 1.42494e-127 Length: 321, Idn/Pos/Gap = 215/261/9 (66%/81%/2%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 DR+ +FPI++P+I+E YK+ ASFWTAEE+DL+ D W N LT ER+F+ HVLAFFAA Sbjct: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAA 74 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 SDGIVLENL+ RFM DV+I EAR FYGFQIA+ENIHSE YSLL+D Y+KD +ER HLFRA Sbjct: 75 SDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRA 134 Query: 327 METMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 +ET+PCV +KA WA++WI SF ER+VAFA VEGIFFSGSFC+IFWLKKRGLMPGLTF Sbjct: 135 IETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTF 194 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELISRDEGLHCDFAC +YS+L ++ +R+ +++ DAVE E+EFVCDALP +L+GM Sbjct: 195 SNELISRDEGLHCDFACLIYSLL--RTKLDEDRLKAIVCDAVEIEREFVCDALPCALVGM 252 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N++LMS YIEFVADRLL LG +++ NPFDWMELISLQGKTNFFEKRVGEYQKA++ Sbjct: 253 NRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFEKRVGEYQKASIM 312 Query: 507 TSA-------TDNVFALDIEF 520 +S D+VF LD +F Sbjct: 313 SSVHGNAAFNDDHVFKLDEDF 333
gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei] sp|O15910|RIR2_TRYBB Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase R2 subunit) (337 aa) Score: 457 bits (1175), Expect: 4.43213e-127 Length: 331, Idn/Pos/Gap = 219/258/3 (66%/77%/0%) Query: 191 TRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLT 250 +R V E DRY +FPIK+P I++ YK +S WT EEIDL DM W +L Sbjct: 9 SRKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWE-KLD 67 Query: 251 EAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLI 310 + ER+F+ HVLAFFAASDGIVLENLAERFM +V++PE RCFYGFQIAMENIHSETYS+LI Sbjct: 68 DGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLI 127 Query: 311 DAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFC 370 D YV DP+E+ L A+ T+PC+ +KA WAI WIGS SF RLVAFAAVEGIFFSGSFC Sbjct: 128 DTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFC 187 Query: 371 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVEC 430 AIFWLKKRGLMPGLTFSNELISRDEGLH DFAC LY ++P +R+ +I +AV Sbjct: 188 AIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIV-NKLPRDRVLEIICNAVSI 246 Query: 431 EKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKT 490 E+EF+CDALPV LIGMN QLM+ YIEFVADRLLV LGYDR +N+ NPFD+M++ISLQGKT Sbjct: 247 EREFICDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKT 306 Query: 491 NFFEKRVGEYQKANVTTSA-TDNVFALDIEF 520 NFFEK+VGEYQKA V +S + VF+LD +F Sbjct: 307 NFFEKKVGEYQKAGVMSSERSSKVFSLDADF 337
emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei] (337 aa) Score: 457 bits (1175), Expect: 4.77777e-127 Length: 318, Idn/Pos/Gap = 217/256/3 (68%/80%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E DRY +FPIK+P I++ YK+ +S WT EEIDL DM W +L + ER+F+ HVLAF Sbjct: 22 ENPDRYVIFPIKYPDIWQKYKKAESSIWTVEEIDLGNDMTDWE-KLDDGERHFIKHVLAF 80 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIVLENLAERFM +V++PE RCFYGFQIAMENIHSETYS+LID YV DP+E+ L Sbjct: 81 FAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPDEKQRL 140 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 A+ T+PC+ +KA WAI WIGS SF RLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG Sbjct: 141 LHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 200 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEGLH DFAC LY ++P +R+ +I +AV E+EF+CDALPV L Sbjct: 201 LTFSNELISRDEGLHTDFACLLYEKYIV-NKLPRDRVLEIICNAVSIEREFICDALPVRL 259 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN QLM+ YIEFVADRLLV LGYDR +N+ NPFD+M++ISLQGKTNFFEK+VGEYQKA Sbjct: 260 IGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGEYQKA 319 Query: 504 NVTTSA-TDNVFALDIEF 520 V +S + VF+LD +F Sbjct: 320 GVMSSERSSKVFSLDADF 337
dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa (japonica cultivar-group)] dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa (japonica cultivar-group)] (339 aa) Score: 456 bits (1173), Expect: 8.63981e-127 Length: 323, Idn/Pos/Gap = 216/266/7 (66%/82%/2%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 AE ++R+++FPI++P+I+EFYK+ VASFWTAEE+DL+AD HW L+ ER+F+SHVLA Sbjct: 19 AESSERFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFISHVLA 78 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIVLENLA RFM DV++ EAR FYGFQIA+ENIHSE YSLL++ Y++D E+ Sbjct: 79 FFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDGAEKDR 138 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LFRA++T+P VRRKA WA+RWI F ERLVAFA VEGIFFSGSFCAIFWLKKRGLMP Sbjct: 139 LFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMP 198 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLHCDFAC LY +L ++ R+ ++ DAV+ E+EFVCDALPV+ Sbjct: 199 GLTFSNELISRDEGLHCDFACLLYDLLRG--KLDEARVREIVADAVDIEREFVCDALPVA 256 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LMS YIEFVADRLL+ LG +++N NPFDWMELISLQGKTNFFEKRVG+YQK Sbjct: 257 LVGMNGDLMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGDYQK 316 Query: 503 ANVTTS-----ATDNVFALDIEF 520 A+V +S + ++VF++D +F Sbjct: 317 ASVMSSLNGGASANHVFSIDEDF 339
gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis thaliana] gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis thaliana] dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana] ref|NP_189342.1| ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative [Arabidopsis thaliana] (332 aa) Score: 451 bits (1159), Expect: 2.97118e-125 Length: 320, Idn/Pos/Gap = 215/259/8 (67%/80%/2%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 DR+ +FPI +P+I+E YK+ ASFWTAEE+DL+ D W N L + ER+F+ HVLAFFAA Sbjct: 15 DRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFIKHVLAFFAA 74 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 SDGIVLENLA RFM DV++ EAR FYGFQIA+ENIHSE YSLL+D Y+KD +ER HLFRA Sbjct: 75 SDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRA 134 Query: 327 METMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 +ET+PCV +KA WA++WI +F ER++AFA VEGIFFSGSFC+IFWLKKRGLMPGLTF Sbjct: 135 IETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKKRGLMPGLTF 194 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELISRDEGLHCDFAC LY++L + ER+ S++ DAVE E+EFVCDALP +L+GM Sbjct: 195 SNELISRDEGLHCDFACLLYTLLKTKLS--EERVKSIVCDAVEIEREFVCDALPCALVGM 252 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N+ LMS YIEFVADRLL LGY +++ NPFDWMELISLQGKTNFFEKRVG+YQKA+V Sbjct: 253 NRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFEKRVGDYQKASVM 312 Query: 507 TSATDN------VFALDIEF 520 +S N VF+LD +F Sbjct: 313 SSVNGNGAFDNHVFSLDEDF 332
gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max] (339 aa) Score: 448 bits (1153), Expect: 1.57637e-124 Length: 321, Idn/Pos/Gap = 214/259/7 (66%/80%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E++ R+ +FPI++ +I+E YK+ ASFWTAEE+DL+ D+ HW L+ +E++F++HVLAF Sbjct: 22 EQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYDVQHWET-LSVSEKHFITHVLAF 80 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIVLENLA RF+ DV+IPEAR FYGFQIAMENIHSE YSLL++ Y+KD E+ L Sbjct: 81 FAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSREKHKL 140 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+E +PCV RKA WA+ WI S SF ERLVAFA VEGIFFSGSFCAIFWLKKRGLMPG Sbjct: 141 FNAIENLPCVARKAEWALSWIHSSTSFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPG 200 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEGLHCDFAC LYS+L + + ++++H ++ +AVE E EFVCDALP +L Sbjct: 201 LTFSNELISRDEGLHCDFACLLYSLL--RKPLISDQVHKLVHEAVEIETEFVCDALPCAL 258 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN LMS YI+FVADRLLV LGY R +N NPFDWME ISLQGK NFFE+RVG+YQKA Sbjct: 259 IGMNSVLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFISLQGKANFFERRVGDYQKA 318 Query: 504 NVTTSATDN----VFALDIEF 520 +V +S D VF LD +F Sbjct: 319 SVMSSLQDAGKNFVFKLDEDF 339
gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum] gb|AAO51317.1| similar to Dictyostelium discoideum (Slime mold). Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase) gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum] gb|EAL70444.1| hypothetical protein DDB0217423 [Dictyostelium discoideum] sp|P42521|RIR2_DICDI Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (338 aa) Score: 441 bits (1135), Expect: 1.87935e-122 Length: 302, Idn/Pos/Gap = 204/245/2 (67%/81%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E DR+ LFPIK+P I+ YK+ +AS W AEEIDL D W +LT+ ER+F+SHVLAF Sbjct: 17 ENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFISHVLAF 76 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLA RFM +V+IPEARCFYGFQIA+ENIHSETYSLLI+ Y+KD + + L Sbjct: 77 FAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQTKDKL 136 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+ET+PC+++KA WA+RWI SF ERLVAFAAVEGIFFSGSFC+IFWLKKRGLM G Sbjct: 137 FNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKRGLMQG 196 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEGLHCDFAC LY+ L + ++ + I MIRDAVECEKEF+C++LPV L Sbjct: 197 LTFSNELISRDEGLHCDFACLLYTKL--QRKLDPKVIEKMIRDAVECEKEFICESLPVDL 254 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN + MS YIEF ADRL+V LGY +++N+ NPF+WME+ISLQ K+NFFE +V EY K Sbjct: 255 IGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEYAKT 314 Query: 504 NV 505 V Sbjct: 315 GV 316
ref|YP_008348.1| probable ribonucleoside-diphosphate reductase small chain [Parachlamydia sp. UWE25] emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain [Parachlamydia sp. UWE25] (323 aa) Score: 441 bits (1133), Expect: 3.81959e-122 Length: 317, Idn/Pos/Gap = 207/249/3 (65%/78%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E DR+ LFPI H +I++ YK+ ASFWTAEEIDL +D+ W +L E+YF+ H+LAF Sbjct: 10 ENKDRFVLFPINHAEIWQMYKKAEASFWTAEEIDLTSDLLDWDRKLNNDEKYFIKHILAF 69 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLA FM +V+ PEARCFYGFQI MENIHSE YSLLID Y+KDP ++ L Sbjct: 70 FAASDGIVNENLAVNFMSEVQYPEARCFYGFQIMMENIHSEAYSLLIDTYIKDPTDKNRL 129 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F+A+ET+PC+ KA WA+RWI S SF ERLVAFAAVEGIFFSGSFC+IFWLKKRGLMPG Sbjct: 130 FKALETIPCISNKADWALRWI-SQGSFSERLVAFAAVEGIFFSGSFCSIFWLKKRGLMPG 188 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 L+F+NELISRDEGLHCDFAC LYS L ++P E + ++I AV EKEFV DALPV L Sbjct: 189 LSFANELISRDEGLHCDFACLLYSQL--NNKLPLETLQAIISHAVAIEKEFVQDALPVRL 246 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN LM YIEFVADRLLV LG +L+N NPFD+M+LIS+ GKTNFFE+RV EYQK+ Sbjct: 247 IGMNATLMCQYIEFVADRLLVALGSPKLYNVDNPFDFMDLISMPGKTNFFERRVSEYQKS 306 Query: 504 NVTTSATDNVFALDIEF 520 V ++ ++VF + +F Sbjct: 307 GVMSTKENHVFTIHEDF 323
gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana] dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana] gb|AAK50108.1| AT3g23580/MDB19_7 [Arabidopsis thaliana] ref|NP_189000.1| ribonucleoside-diphosphate reductase small chain / ribonucleotide reductase [Arabidopsis thaliana] sp|P50651|RIR2_ARATH Ribonucleoside-diphosphate reductase small subunit (Ribonucleoside-diphosphate reductase R2 subunit) (Protein R2at) (AtRNR2) (341 aa) Score: 440 bits (1131), Expect: 5.33289e-122 Length: 301, Idn/Pos/Gap = 203/249/3 (67%/82%/0%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+T+FPI++ I+E YK+ ASFWTAEE+DL+ D+ W LT++E++F+SH+LAFFAAS Sbjct: 28 RFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWE-ALTDSEKHFISHILAFFAAS 86 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIVLENLA RF+ DV++PEAR FYGFQIAMENIHSE YSLL++ ++KD +E+ LF A+ Sbjct: 87 DGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAI 146 Query: 328 ETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFS 387 ET+PC+ +KA W + WI S SF RLVAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFS Sbjct: 147 ETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 206 Query: 388 NELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMN 447 NELISRDEGLHCDFAC LYS+L ++++P E+++ ++ +AVE E EFVC ALP LIGMN Sbjct: 207 NELISRDEGLHCDFACLLYSLL--QKQLPLEKVYQIVHEAVEIETEFVCKALPCDLIGMN 264 Query: 448 QQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTT 507 LMS YI+FVADRLLV LG +R + NPFDWME ISLQGKTNFFEKRVGEYQKA+V + Sbjct: 265 SNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEYQKASVMS 324 Query: 508 S 508 + Sbjct: 325 N 325
emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio] gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio] gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio] ref|NP_571525.1| ribonucleotide reductase M2 polypeptide [Danio rerio] sp|P79733|RIR2_BRARE Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase protein R2 class I) (386 aa) Score: 439 bits (1129), Expect: 9.88808e-122 Length: 321, Idn/Pos/Gap = 211/255/10 (65%/79%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + L + ERYF+SHVLAF Sbjct: 72 ENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHW-DSLKDEERYFISHVLAF 130 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KD +ER L Sbjct: 131 FAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFL 190 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+ WIG +A + ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 191 FNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 250 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V +I +AVE E+EF+ DAL Sbjct: 251 GLTFSNELISRDEGLHCDFACLMFKHLINKPSEETV-----KKIIMNAVEIEQEFLTDAL 305 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRLL+ELG+D+++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 306 PVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKRVGE 365 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V + TDN F LD +F Sbjct: 366 YQRMGVMSGTTDNTFTLDADF 386
gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio] (386 aa) Score: 439 bits (1128), Expect: 1.23866e-121 Length: 321, Idn/Pos/Gap = 211/255/10 (65%/79%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + L + ERYF+SHVLAF Sbjct: 72 ENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHW-DSLKDEERYFISHVLAF 130 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KD +ER L Sbjct: 131 FAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFL 190 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+ WIG +A + ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 191 FNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 250 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V +I +AVE E+EF+ DAL Sbjct: 251 GLTFSNELISRDEGLHCDFACLMFKHLISKPSEETV-----KKIIMNAVEIEQEFLTDAL 305 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRLL+ELG+D+++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 306 PVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKRVGE 365 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V + TDN F LD +F Sbjct: 366 YQRMGVMSGTTDNTFTLDADF 386
gb|AAH41209.1| MGC52676 protein [Xenopus laevis] (386 aa) Score: 437 bits (1124), Expect: 3.42795e-121 Length: 317, Idn/Pos/Gap = 210/257/10 (66%/81%/3%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + L + E+YF+SHVLAFFAAS Sbjct: 76 RFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES-LKKEEKYFISHVLAFFAAS 134 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID YVKDP+ER +LF A+ Sbjct: 135 DGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYVKDPKEREYLFNAI 194 Query: 328 ETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ET+PCV++KA WA+ WIG A+F ER+VAFAAVEGIFFSGSF +IFWLKKRGLMPGLTF Sbjct: 195 ETLPCVKKKADWALHWIGDKQATFGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 254 Query: 387 SNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 SNELISRDEGLHCDFAC ++ L P+EERV +I DAV+ E+EF+ +ALPV+L Sbjct: 255 SNELISRDEGLHCDFACLMFKHLIRKPSEERVV-----ELITDAVQIEQEFLTEALPVNL 309 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN LM YIEFVADRLL+ELG+ +++ NPFD+ME ISL+GKTNFFEK+VGEYQK Sbjct: 310 IGMNCTLMKQYIEFVADRLLLELGFKKVFKATNPFDFMENISLEGKTNFFEKKVGEYQKM 369 Query: 504 NVTTSATDNVFALDIEF 520 V + A DN F LD +F Sbjct: 370 GVMSKAKDNTFTLDADF 386
gb|AAH80161.1| Rrm2-prov protein [Xenopus tropicalis] ref|NP_001007890.1| rrm2-prov protein [Xenopus tropicalis] (386 aa) Score: 436 bits (1121), Expect: 7.89586e-121 Length: 317, Idn/Pos/Gap = 208/257/10 (65%/81%/3%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + L E+YF+SHVLAFFAAS Sbjct: 76 RFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWES-LKAEEKYFISHVLAFFAAS 134 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER +LF A+ Sbjct: 135 DGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAI 194 Query: 328 ETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ET+PCV++KA WA+RWIG A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMPGLTF Sbjct: 195 ETLPCVKKKADWALRWIGDKQATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 254 Query: 387 SNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 SNELISRDEGLHCDFAC ++ L P+EERV +I DAV+ E+EF+ +ALPV+L Sbjct: 255 SNELISRDEGLHCDFACLMFKHLVNKPSEERVV-----QLITDAVQIEQEFLTEALPVNL 309 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN LM YIEFVADRLL+ELG+++++ NPFD+ME ISL+GKTNFFEK+VGEYQK Sbjct: 310 IGMNCTLMKQYIEFVADRLLLELGFNKVFKATNPFDFMENISLEGKTNFFEKKVGEYQKM 369 Query: 504 NVTTSATDNVFALDIEF 520 V + DN F LD +F Sbjct: 370 GVMSKPKDNTFTLDADF 386
ref|NP_525111.1| CG8975-PA [Drosophila melanogaster] gb|AAF58599.2| CG8975-PA [Drosophila melanogaster] gb|AAK93360.1| LD41588p [Drosophila melanogaster] sp|P48592|RIR2_DROME Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) (393 aa) Score: 434 bits (1116), Expect: 3.54532e-120 Length: 318, Idn/Pos/Gap = 208/256/4 (65%/80%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWT EE+DL+ D+ W +RL + ER+F+SHVLAF Sbjct: 79 ENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDW-HRLKDDERHFISHVLAF 137 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V+I EARCFYGFQIAMEN+HSE YS+LID Y++DP +R +L Sbjct: 138 FAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYL 197 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMP V+RKA WA+ WI S A+F ER++AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 198 FNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMP 257 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLHCDFA ++ L +R ERI +IRDAV E+EF+ DALPV+ Sbjct: 258 GLTFSNELISRDEGLHCDFAVLMFQHLV--QRPKRERIIEIIRDAVAIEQEFLTDALPVN 315 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 LIGMN LMS YIEFVADRLLVELG +++NT NPF++ME+ISL GKTNFFEK+VGEYQ+ Sbjct: 316 LIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEKKVGEYQR 375 Query: 503 ANVTTSATDNVFALDIEF 520 V ++ DNVF LD +F Sbjct: 376 MGVVSNPLDNVFTLDADF 393
gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis] (386 aa) Score: 433 bits (1113), Expect: 6.57363e-120 Length: 317, Idn/Pos/Gap = 208/256/10 (65%/80%/3%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + T+ ERYF+SHVLAFFAAS Sbjct: 76 RFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKTD-ERYFISHVLAFFAAS 134 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER LF A+ Sbjct: 135 DGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKERGFLFNAI 194 Query: 328 ETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ET+PCV++KA WA+RWI A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMPGLTF Sbjct: 195 ETLPCVKKKADWALRWISDKQATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 254 Query: 387 SNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 SNELISRDEGLHCDFAC ++ L P+EERV +I +AV+ E+EF+ +ALPV+L Sbjct: 255 SNELISRDEGLHCDFACLMFRHLVHKPSEERVV-----QLITNAVQIEQEFLTEALPVNL 309 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN LM YIEFVADRLL+ELG+++++ NPFD+ME ISL+GKTNFFEKRVGEYQK Sbjct: 310 IGMNCTLMKQYIEFVADRLLLELGFNKVFKASNPFDFMENISLEGKTNFFEKRVGEYQKM 369 Query: 504 NVTTSATDNVFALDIEF 520 V + DN F LD +F Sbjct: 370 GVMSKPKDNTFTLDADF 386
pir||T28466 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - variola major virus gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small chain); putative (333 aa) Score: 432 bits (1111), Expect: 1.16906e-119 Length: 338, Idn/Pos/Gap = 209/261/10 (61%/77%/2%) Query: 186 SERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW 245 +E+ T + + V A+ +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W Sbjct: 3 TEKKITTIVNLVMEPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW 62 Query: 246 RNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSET 305 N+LT E+YF+ HVLAFFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE Sbjct: 63 -NKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEM 121 Query: 306 YSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFF 365 YSLLID YVKD E+ +LF A+ETMPCV++KA WA +WI AS+ ERL+AFAAVEGIFF Sbjct: 122 YSLLIDTYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSASYGERLIAFAAVEGIFF 181 Query: 366 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHS 422 SGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+EE V S Sbjct: 182 SGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RS 236 Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWME 482 +I DAV E+EF+ ALPV LIGMN ++M YI+FVADRL+ ELG+ +++N NPFD+ME Sbjct: 237 IITDAVSIEQEFLTVALPVKLIGMNCEMMKTYIKFVADRLISELGFKKIYNVTNPFDFME 296 Query: 483 LISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 ISL+GKTNFFEKRVGEYQK V S DN F+LD++F Sbjct: 297 NISLEGKTNFFEKRVGEYQKMGV-MSQEDNHFSLDVDF 333
gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania mexicana amazonensis] (354 aa) Score: 432 bits (1110), Expect: 1.73041e-119 Length: 321, Idn/Pos/Gap = 206/251/3 (64%/78%/0%) Query: 201 FKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHV 260 + E RY LFPI++ I+ YK + WT EEIDL DM W L + ER+F+ HV Sbjct: 36 LQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWA-ALNDGERHFIKHV 94 Query: 261 LAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEER 320 LAFFA SDGIV+ENLA+RFM DV++PEAR FYGFQ+ MENIHSETYS+L+D Y+ D EE+ Sbjct: 95 LAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEK 154 Query: 321 THLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGL 380 L A++T+PC++RKA WA+RWIGS ASFQERL+ FAAVEGIFFSGSFCA+FWLKKRGL Sbjct: 155 LRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKRGL 214 Query: 381 MPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALP 440 MPGLTFSNELISRDEGLH DFAC LY+ + ++P ER+ +I DAV E+EF+CDALP Sbjct: 215 MPGLTFSNELISRDEGLHTDFACLLYNS-HIKHKLPRERVLEIIVDAVNIEREFICDALP 273 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEY 500 V LIGMN +LM+ YIEFVADRLLV LG ++ +N+ PFD+ME+ISLQGKTNFFEK+VGEY Sbjct: 274 VRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQPFDFMEMISLQGKTNFFEKKVGEY 333 Query: 501 QKANV-TTSATDNVFALDIEF 520 QKA V +T T F+L +F Sbjct: 334 QKAGVMSTEGTSKKFSLSEDF 354
gb|AAX93099.1| unknown [Homo sapiens] emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens] gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens] gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens] gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens] sp|P31350|RIR2_HUMAN Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens] ref|NP_001025.1| ribonucleotide reductase M2 polypeptide [Homo sapiens] (389 aa) Score: 431 bits (1108), Expect: 2.8075e-119 Length: 321, Idn/Pos/Gap = 211/257/10 (65%/80%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + L ERYF+SHVLAF Sbjct: 75 ENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES-LKPEERYFISHVLAF 133 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V+I EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER L Sbjct: 134 FAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFL 193 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+RWIG +A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 194 FNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 253 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EERV +I +AV E+EF+ +AL Sbjct: 254 GLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERV-----REIIINAVRIEQEFLTEAL 308 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRL++ELG+ +++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 309 PVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGE 368 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V +S T+N F LD +F Sbjct: 369 YQRMGVMSSPTENSFTLDADF 389
gb|AAM13497.1| CPXV051 protein [Cowpox virus] ref|NP_619839.1| CPXV051 protein [Cowpox virus] (333 aa) Score: 431 bits (1107), Expect: 3.95265e-119 Length: 321, Idn/Pos/Gap = 207/253/10 (64%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E++F+ HVLA Sbjct: 20 APNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPNEKHFIKHVLA 78 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 79 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 138 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI AS+ ERLVAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 139 LFNAIETMPCVKKKADWAQKWIHDSASYGERLVAFAAVEGIFFSGSFASIFWLKKRGLMP 198 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 199 GLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETV-----RSIITDAVSIEQEFLTAAL 253 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 254 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 313 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 314 YQKMGV-MSQEDNHFSLDVDF 333
gb|AAF72618.1| ribonucleotide reductase small subunit M2 [Leishmania mexicana amazonensis] (345 aa) Score: 430 bits (1106), Expect: 4.2966e-119 Length: 321, Idn/Pos/Gap = 205/250/3 (63%/77%/0%) Query: 201 FKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHV 260 + E RY LFPI++ I+ YK + WT EEIDL DM W L + ER+F+ HV Sbjct: 27 LQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAT-LNDGERHFIKHV 85 Query: 261 LAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEER 320 LAFFA SDGIV+ENLA+RFM DV++PEAR FYGFQ+ MENIHSETYS+L+D Y+ D EE+ Sbjct: 86 LAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEK 145 Query: 321 THLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGL 380 L A++T+PC+++KA WA+RWIGS ASFQERL+ FAAVEGIFFSGSFCA+FWLKKRGL Sbjct: 146 LRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKRGL 205 Query: 381 MPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALP 440 MPGLTFSNELISRDEGLH DFAC LY+ + ++P ER+ +I DAV E+EF+CDALP Sbjct: 206 MPGLTFSNELISRDEGLHTDFACLLYNS-HIKHKLPRERVLEIIVDAVNIEREFICDALP 264 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEY 500 V LIGMN +LM+ YIEFVADRLLV LG ++ + + PFD+ME+ISLQGKTNFFEKRVGEY Sbjct: 265 VRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGEY 324 Query: 501 QKANV-TTSATDNVFALDIEF 520 QKA V +T T F+L +F Sbjct: 325 QKAGVMSTEGTSKKFSLSEDF 345
gb|EAL25959.1| GA21447-PA [Drosophila pseudoobscura] (388 aa) Score: 430 bits (1106), Expect: 4.78887e-119 Length: 318, Idn/Pos/Gap = 211/255/4 (66%/80%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWT EE+DL+ D W RLT+ ERYF+SHVLAF Sbjct: 74 ENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDATDWA-RLTDNERYFISHVLAF 132 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V+I EARCFYGFQIAMEN+HSE YS+LID Y+++P+ER +L Sbjct: 133 FAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIREPQERDYL 192 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMP V+RKA WA+ WI S A+F ER++AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 193 FNAIETMPAVKRKADWAMSWISSKSANFAERIIAFAAVEGIFFSGSFASIFWLKKRGLMP 252 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLHCDFA +Y L +R ERI +IRDAVE E+EF+ +ALPV+ Sbjct: 253 GLTFSNELISRDEGLHCDFAVLMYHHLV--QRPKRERIIEIIRDAVEIEQEFLTEALPVN 310 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 LIGMN LMS YIEFVADRLL ELG +++NT NPF++ME+ISL GKTNFFEK+V EYQ+ Sbjct: 311 LIGMNCVLMSQYIEFVADRLLGELGVGKIYNTKNPFNFMEMISLDGKTNFFEKKVAEYQR 370 Query: 503 ANVTTSATDNVFALDIEF 520 V TS DNVF LD +F Sbjct: 371 MGVVTSRLDNVFTLDADF 388
emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana] pir||S68538 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - Arabidopsis thaliana (340 aa) Score: 430 bits (1106), Expect: 4.95139e-119 Length: 301, Idn/Pos/Gap = 202/245/4 (67%/81%/1%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+T+FPI++ I+E YK+ ASFWTAEE+DL+ D+ W LT++E++F+SH+LAFFAAS Sbjct: 28 RFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWE-ALTDSEKHFISHILAFFAAS 86 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIVLENLA RF+ DV++PEAR FYGFQIAMENIHSE YSLL++ ++KD +E+ LF A+ Sbjct: 87 DGIVLENLA-RFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAI 145 Query: 328 ETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFS 387 ET+PC+ +KA W + WI S SF RLVAFA EGIFFSGSFCAIFWLKKRGLMPGLTFS Sbjct: 146 ETIPCISKKAKWCLDWIQSPMSFAVRLVAFACAEGIFFSGSFCAIFWLKKRGLMPGLTFS 205 Query: 388 NELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMN 447 NELISRDEGLHCDFAC L S+L + VP E+++ ++ +AVE E EFVC ALP LIGMN Sbjct: 206 NELISRDEGLHCDFACLLISLL--QLHVPLEKVYQIVHEAVEIETEFVCKALPCDLIGMN 263 Query: 448 QQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTT 507 LMS YI+FVADRLLV LG +R + NPFDWME ISLQGKTNFFEKRVGEYQKA+V + Sbjct: 264 SNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEYQKASVMS 323 Query: 508 S 508 + Sbjct: 324 N 324
ref|YP_006676.1| RPXV032 [Rabbitpox virus] gb|AAS49745.1| RPXV032 [Rabbitpox virus] (319 aa) Score: 430 bits (1105), Expect: 5.33753e-119 Length: 321, Idn/Pos/Gap = 206/252/10 (64%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RSIITDAVSIEQEFLTAAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQKDNHFSLDVDF 319
gb|AAL73746.1| ribonucleotide reductase small subunit; CMLV039 [Camelpox virus M-96] gb|AAG37497.1| CMP39L [Camelpox virus CMS] ref|NP_570429.1| ribonucleotide reductase small subunit; CMLV039 [Camelpox virus] (319 aa) Score: 430 bits (1105), Expect: 5.56491e-119 Length: 321, Idn/Pos/Gap = 206/253/10 (64%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A+ +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 AKNQNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPNEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVI-----SIITDAVSIEQEFLTVAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVINPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
ref|XP_418364.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible); p53-inducible ribonucleotide reductase small subunit 2 homolog [Gallus gallus] (355 aa) Score: 430 bits (1105), Expect: 6.41298e-119 Length: 314, Idn/Pos/Gap = 207/253/4 (65%/80%/1%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ +FPI+HP I++ YK+ ASFWTAEE+DL+ D+ HW N+L E+YF+SHVLAFFAAS Sbjct: 45 RFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHW-NKLKADEKYFISHVLAFFAAS 103 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL RF ++V+IPEARCFYGFQI +EN+HSE YSLLID Y+KDPE+R LF A+ Sbjct: 104 DGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPEKRDFLFNAI 163 Query: 328 ETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ETMPCV++KA WA++WI +++F ER+VAFAAVEGIFFSGSF AIFWLKKRGLMPGLTF Sbjct: 164 ETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTF 223 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELISRDEGLHCDFAC ++ L R ER+ +I +AVE E+EF+ +ALPV LIGM Sbjct: 224 SNELISRDEGLHCDFACLMFHYLV--NRPSEERVREIIVNAVEIEQEFLTEALPVGLIGM 281 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N LM YIEFVADRLL+ELG+ ++++ NPFD+ME ISL+GKTNFFEKRV EYQ+ V Sbjct: 282 NCTLMKQYIEFVADRLLMELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSEYQRFAVM 341 Query: 507 TSATDNVFALDIEF 520 DNVF LD +F Sbjct: 342 AETMDNVFTLDADF 355
ref|NP_063681.1| ribonucleoside-diphosphate reductase [Vaccinia virus] gb|AAA48018.1| F4L; putative sp|P20493|RIR2_VACCC Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (319 aa) Score: 429 bits (1104), Expect: 7.02943e-119 Length: 321, Idn/Pos/Gap = 206/252/10 (64%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RSIITDAVSIEQEFLTAAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
emb|CAB54628.1| E4L protein [Variola minor virus] gb|AAA69374.1| E4L [Variola virus] pir||B72154 E4L protein - variola minor virus (strain Garcia-1966) (319 aa) Score: 429 bits (1104), Expect: 7.20761e-119 Length: 321, Idn/Pos/Gap = 206/253/10 (64%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A+ +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 AKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RSIITDAVSIEQEFLTVAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
gb|EAA73842.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1] ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1] (399 aa) Score: 429 bits (1103), Expect: 9.10444e-119 Length: 307, Idn/Pos/Gap = 204/247/3 (66%/80%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ +I++ YK+ ASFWTAEEIDL+ D+ W NRLT E+YF+SH+LAF Sbjct: 72 ENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQYFISHILAF 131 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF +V+IPEARCFYGFQI MENIHSETYSLLID Y+KDP +RT+L Sbjct: 132 FAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKDPAQRTYL 191 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++T+PC+R+KA WAIRWI +++F +RLVAFAAVEGIFFSG+F +IFWLKKRGLMP Sbjct: 192 FNAVDTIPCIRKKADWAIRWIQDKNSTFAQRLVAFAAVEGIFFSGAFASIFWLKKRGLMP 251 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GL+FSNELISRDEGLH DFAC L+S L R + I +I DAV E+EF+ +ALP + Sbjct: 252 GLSFSNELISRDEGLHTDFACLLHSHLKG--RASKQMIQDIITDAVSIEQEFLTEALPCA 309 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LM YIEFVADRLLV LG ++++ + NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 310 LLGMNSNLMKQYIEFVADRLLVALGNEKVYKSTNPFDFMENISLGGKTNFFEKRVADYQK 369 Query: 503 ANVTTSA 509 A V SA Sbjct: 370 AGVLHSA 376
gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus] gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus] pir||T30782 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - vaccinia virus (strain Ankara) sp|O57175|RIR2_VACCA Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (319 aa) Score: 429 bits (1103), Expect: 1.04919e-118 Length: 321, Idn/Pos/Gap = 206/252/10 (64%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETV-----RSIITDAVSIEQEFLTAAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus] pir||RDVZVV ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - vaccinia virus gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit gb|AAA48244.1| F4L protein sp|P11158|RIR2_VACCV Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (319 aa) Score: 429 bits (1103), Expect: 1.14049e-118 Length: 321, Idn/Pos/Gap = 206/252/10 (64%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETV-----RSIITDAVSIEQEFLTAAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
pir||T46249 hypothetical protein DKFZp761E1312.1 - human (fragment) (366 aa) Score: 429 bits (1102), Expect: 1.26059e-118 Length: 348, Idn/Pos/Gap = 212/269/16 (60%/77%/4%) Query: 182 GLDGSERG-----DTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEI 236 GLD ER ++ ++S+ + + + + R+ +FPI++P I++ YK+ ASFWTAEE+ Sbjct: 26 GLDQDERSSSDTNESEIKSNEEPLLR-KSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEV 84 Query: 237 DLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQI 296 DL+ D+ HW N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V++PEARCFYGFQI Sbjct: 85 DLSKDLPHW-NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQI 143 Query: 297 AMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQERLV 355 +EN+HSE YSLLID Y++DP++R LF A+ETMP V++KA WA+RWI ++F ER+V Sbjct: 144 LIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVV 203 Query: 356 AFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAE 412 AFAAVEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+E Sbjct: 204 AFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE 263 Query: 413 ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 ERV +I DAV+ E+EF+ +ALPV LIGMN LM YIEFVADRLLVELG+ +++ Sbjct: 264 ERV-----REIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 318 Query: 473 NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 319 QAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 366
ref|NP_033130.1| ribonucleotide reductase M2 [Mus musculus] gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus] sp|P11157|RIR2_MOUSE Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase To Model The Reactive Diferrous State emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus] dbj|BAC40647.1| unnamed protein product [Mus musculus] pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase To Model The Reactive Diferrous State gb|AAA40062.1| ribonucleotide reductase subunit M2 pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase Subunit R2 Under Reducing Conditions. A Fully Occupied Dinuclear Iron Cluster And Bound Acetate. pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase Subunit R2 Under Oxidizing Conditions. A Fully Occupied Dinuclear Iron Cluster. pdb|1XSM| Protein R2 Of Ribonucleotide Reductase From Mouse (390 aa) Score: 429 bits (1102), Expect: 1.41679e-118 Length: 321, Idn/Pos/Gap = 208/259/10 (64%/80%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW L ER+F+SHVLAF Sbjct: 76 ENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE-ALKPDERHFISHVLAF 134 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER +L Sbjct: 135 FAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYL 194 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+RWIG +A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 195 FNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 254 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L PAE+RV +I +AV E+EF+ +AL Sbjct: 255 GLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRV-----REIITNAVRIEQEFLTEAL 309 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRL++ELG+++++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 310 PVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVGE 369 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V +++T+N F LD +F Sbjct: 370 YQRMGVMSNSTENSFTLDADF 390
ref|XP_515297.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Pan troglodytes] (339 aa) Score: 429 bits (1102), Expect: 1.42866e-118 Length: 321, Idn/Pos/Gap = 211/257/10 (65%/80%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + L ERYF+SHVLAF Sbjct: 25 ENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES-LKPEERYFISHVLAF 83 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V+I EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER L Sbjct: 84 FAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFL 143 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+RWIG +A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 144 FNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 203 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EERV +I +AV E+EF+ +AL Sbjct: 204 GLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERV-----REIIINAVRIEQEFLTEAL 258 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRL++ELG+ +++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 259 PVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGE 318 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V +S T+N F LD +F Sbjct: 319 YQRMGVMSSPTENSFTLDADF 339
emb|CAB70703.2| hypothetical protein [Homo sapiens] dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo sapiens] dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens] ref|NP_056528.2| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens] dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens] (351 aa) Score: 429 bits (1102), Expect: 1.51459e-118 Length: 348, Idn/Pos/Gap = 212/269/16 (60%/77%/4%) Query: 182 GLDGSERG-----DTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEI 236 GLD ER ++ ++S+ + + + + R+ +FPI++P I++ YK+ ASFWTAEE+ Sbjct: 11 GLDQDERSSSDTNESEIKSNEEPLLR-KSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEV 69 Query: 237 DLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQI 296 DL+ D+ HW N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V++PEARCFYGFQI Sbjct: 70 DLSKDLPHW-NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQI 128 Query: 297 AMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQERLV 355 +EN+HSE YSLLID Y++DP++R LF A+ETMP V++KA WA+RWI ++F ER+V Sbjct: 129 LIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVV 188 Query: 356 AFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAE 412 AFAAVEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+E Sbjct: 189 AFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE 248 Query: 413 ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 ERV +I DAV+ E+EF+ +ALPV LIGMN LM YIEFVADRLLVELG+ +++ Sbjct: 249 ERV-----REIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 303 Query: 473 NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 304 QAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 351
gb|AAM92332.1| EVM028 [Ectromelia virus] ref|NP_671546.1| EVM028 [Ectromelia virus] (319 aa) Score: 428 bits (1101), Expect: 1.81977e-118 Length: 321, Idn/Pos/Gap = 204/252/10 (63%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V++ EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RSIITDAVSIEQEFLTVAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEF+ADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFIADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
emb|CAH91600.1| hypothetical protein [Pongo pygmaeus] (351 aa) Score: 428 bits (1101), Expect: 1.88153e-118 Length: 348, Idn/Pos/Gap = 212/268/16 (60%/77%/4%) Query: 182 GLDGSERG-----DTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEI 236 GLD ER + ++S+ + + + + R+ +FPI++P I++ YK+ ASFWTAEE+ Sbjct: 11 GLDQDERSSSDTNENEIKSNEEPLLR-KSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEV 69 Query: 237 DLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQI 296 DL+ D+ HW N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V++PEARCFYGFQI Sbjct: 70 DLSKDLPHW-NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQI 128 Query: 297 AMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQERLV 355 +EN+HSE YSLLID Y++DP++R LF A+ETMP V++KA WA+RWI ++F ER+V Sbjct: 129 LIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVV 188 Query: 356 AFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAE 412 AFAAVEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+E Sbjct: 189 AFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE 248 Query: 413 ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 ERV +I DAV+ E+EF+ +ALPV LIGMN LM YIEFVADRLLVELG+ +++ Sbjct: 249 ERV-----REIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVF 303 Query: 473 NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 304 QAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 351
gb|AAA69439.1| C8L [Variola virus] gb|AAA69333.1| C8L [Variola virus] (319 aa) Score: 428 bits (1100), Expect: 2.06239e-118 Length: 321, Idn/Pos/Gap = 205/253/10 (63%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A+ +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 AKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RSIITDAVSIEQEFLTVAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YI+FVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIKFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
ref|NP_042072.1| C8L [Variola virus] emb|CAA48969.1| C8L [Variola virus] pir||H36839 C8L protein - variola virus (strain India-1967) prf||2015436AF C8L gene (333 aa) Score: 428 bits (1100), Expect: 2.16826e-118 Length: 338, Idn/Pos/Gap = 208/259/10 (61%/76%/2%) Query: 186 SERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW 245 +E+ T + + V A+ +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W Sbjct: 3 TEKKITTIVNLVMEPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW 62 Query: 246 RNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSET 305 N+LT E+YF+ HVLAFFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE Sbjct: 63 -NKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEM 121 Query: 306 YSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFF 365 YSLLID YVKD E+ +LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFF Sbjct: 122 YSLLIDTYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFF 181 Query: 366 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHS 422 SGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+EE V S Sbjct: 182 SGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RS 236 Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWME 482 +I DAV E+EF+ ALPV LIGMN ++M Y+EFVADRL+ ELG+ R++N NP D+ME Sbjct: 237 IITDAVSIEQEFLTVALPVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFME 296 Query: 483 LISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 ISL+GKTNFFEKRVGEYQK V S DN F+LD++F Sbjct: 297 NISLEGKTNFFEKRVGEYQKMGV-MSQEDNHFSLDVDF 333
gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania mexicana amazonensis] sp|O46310|RIR2_LEIAM Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase M2 subunit) (345 aa) Score: 427 bits (1098), Expect: 3.40243e-118 Length: 321, Idn/Pos/Gap = 203/249/3 (63%/77%/0%) Query: 201 FKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHV 260 + E RY LFPI++ I+ YK + WT EEIDL DM W L + ER+F+ HV Sbjct: 27 LQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAT-LNDGERHFIKHV 85 Query: 261 LAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEER 320 LAFFA SDGIV+ENLA+RFM DV++PEAR FYGFQ+ MENIHSETYS+L+D Y+ D EE+ Sbjct: 86 LAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEK 145 Query: 321 THLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGL 380 L A++T+PC+++KA W +RWIGS ASFQ+RL+ FAAVEGIFFSGSFCA+FWLKKRGL Sbjct: 146 LRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKKRGL 205 Query: 381 MPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALP 440 MPGLTFSNELISRDEGLH DFAC LY+ + ++P ER+ +I DAV E+EF+CDALP Sbjct: 206 MPGLTFSNELISRDEGLHTDFACLLYNS-HIKHKLPRERVLEIIVDAVNIEREFICDALP 264 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEY 500 V LIGMN +LM+ YIEFVADRLLV LG ++ + + PFD+ME+ISLQGKTNFFEKRVGEY Sbjct: 265 VRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGEY 324 Query: 501 QKANV-TTSATDNVFALDIEF 520 QKA V +T T F+L +F Sbjct: 325 QKAGVMSTEGTSKKFSLSEDF 345
gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus] ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus] (320 aa) Score: 427 bits (1098), Expect: 4.15678e-118 Length: 319, Idn/Pos/Gap = 206/251/7 (64%/78%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPIK+ I++ YK+ VASFWT EE+DL+ D+D W ++LT+ E+YF+ H+LAF Sbjct: 7 ESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDW-DKLTKDEKYFIKHILAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FA+SDGIV ENLAERF DV+ EARCFYGFQIAMENIHSE YSLLID YV+D E+ HL Sbjct: 66 FASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIEKMHL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+ETM CV++KA WA +WI S+ + ER+VAFAAVEGIFFSGSF AIFW+KKRGLMPG Sbjct: 126 FNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRGLMPG 185 Query: 384 LTFSNELISRDEGLHCDFACHLYSML--PAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 LTFSNELISRDEGLHCDFAC ++ L P + V I S+I DAV EKEF+ A+PV Sbjct: 186 LTFSNELISRDEGLHCDFACLMFKHLLHPPSKEV----ITSIIIDAVNIEKEFLTVAIPV 241 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 LIGMN LMS YIEFVADRLL ELG ++++N NPF +ME ISL+GKTNFFE+RV EYQ Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEKVFNVYNPFSFMEYISLEGKTNFFERRVSEYQ 301 Query: 502 KANVTTSATDNVFALDIEF 520 K V T+ +N+F+ DI+F Sbjct: 302 KMGVFTNKEENIFSTDIDF 320
gb|EAA04227.2| ENSANGP00000013211 [Anopheles gambiae str. PEST] ref|XP_308927.2| ENSANGP00000013211 [Anopheles gambiae str. PEST] (326 aa) Score: 427 bits (1097), Expect: 4.87086e-118 Length: 314, Idn/Pos/Gap = 205/252/4 (65%/80%/1%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ +FPI++P I++ YK+ ASFWT EE+DL+ DM W L +ER+F+SHVLAFFAAS Sbjct: 16 RFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWET-LKPSERHFISHVLAFFAAS 74 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF ++V++ EARCFYGFQIAMEN+HSE YSLLID Y++D +ER LF A+ Sbjct: 75 DGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKEREFLFNAI 134 Query: 328 ETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ET+PCV+RKA WA+ WI S A+F ER+VAFAAVEGIFFSGSF AIFWLKKRGLMPGLTF Sbjct: 135 ETLPCVKRKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTF 194 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELISRDEGLHCDFAC ++ L ++ ER+ +IRDAV E+EF+ ALPV ++GM Sbjct: 195 SNELISRDEGLHCDFACLMFKYLV--QKPSKERVTEIIRDAVLIEQEFLTKALPVDMLGM 252 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N LMS YIEFVADRLL+ELG +++++T NPF +ME ISL+GKTNFFEK+VGEYQK V Sbjct: 253 NCDLMSQYIEFVADRLLLELGCEKIYHTKNPFSFMEFISLEGKTNFFEKKVGEYQKWGVM 312 Query: 507 TSATDNVFALDIEF 520 + DNVF LD +F Sbjct: 313 ANRLDNVFTLDADF 326
dbj|BAA92005.1| unnamed protein product [Homo sapiens] (351 aa) Score: 427 bits (1097), Expect: 4.91167e-118 Length: 348, Idn/Pos/Gap = 211/269/16 (60%/77%/4%) Query: 182 GLDGSERG-----DTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEI 236 GLD ER ++ ++S+ + + + + R+ +FPI++P I++ YK+ ASFWTAEE+ Sbjct: 11 GLDQDERSSSDTNESEIKSNEEPLLR-KSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEV 69 Query: 237 DLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQI 296 DL+ D+ HW N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V++PEARCFYGFQI Sbjct: 70 DLSKDLPHW-NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQI 128 Query: 297 AMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQERLV 355 +EN+HSE YSLLID Y++DP++R LF A+ETMP V++KA WA+RWI ++F ER+V Sbjct: 129 LIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVV 188 Query: 356 AFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAE 412 AFAAVEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+E Sbjct: 189 AFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSE 248 Query: 413 ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 ERV +I DAV+ E+EF+ +ALPV LIG+N LM YIEFVADRLLVELG+ +++ Sbjct: 249 ERV-----REIIVDAVKIEQEFLTEALPVGLIGVNCILMKQYIEFVADRLLVELGFSKVF 303 Query: 473 NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 304 QAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 351
gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa] (333 aa) Score: 426 bits (1096), Expect: 5.80367e-118 Length: 321, Idn/Pos/Gap = 204/251/10 (63%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A+ +R+ +FPI++ I+ YK+ ASFW EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 20 AKNPNRFVIFPIQYHDIWNMYKKAEASFWIVEEVDISKDINDW-NKLTPDEKYFIKHVLA 78 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 79 FFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 138 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 139 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 198 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 199 GLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RSIITDAVSIEQEFLTVAL 253 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M Y+EFVADRL+ ELG+ R++N NP D+ME ISL+GKTNFFEKRVGE Sbjct: 254 PVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGE 313 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 314 YQKMGV-MSQEDNHFSLDVDF 333
emb|CAA64118.1| G4L protein [Cowpox virus] (319 aa) Score: 426 bits (1096), Expect: 6.74416e-118 Length: 321, Idn/Pos/Gap = 205/251/10 (63%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKR LMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRDLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETV-----KSIITDAVSIEQEFLTAAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
emb|CAG82692.1| unnamed protein product [Yarrowia lipolytica CLIB99] ref|XP_500466.1| hypothetical protein [Yarrowia lipolytica] (403 aa) Score: 426 bits (1096), Expect: 7.14979e-118 Length: 324, Idn/Pos/Gap = 208/252/9 (64%/77%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPI++ +I++ YK+ ASFWTAEEIDL DM W NRL ER+F+SHVLAF Sbjct: 82 ENHRRFVLFPIQYHEIWQMYKKAEASFWTAEEIDLGKDMGDWENRLNNDERFFISHVLAF 141 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF +V+ PEA+CFYGFQI MENIHSETYSLLID Y+KDP+ERT+L Sbjct: 142 FAASDGIVNENLVERFSGEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKERTYL 201 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDAS-FQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ET+PC+++KA WA++WI + S F ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 202 FNAIETIPCIKKKADWALKWISDEESTFGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 261 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLH DFAC L+S L E R + + +I +AV E+EF+ DALP Sbjct: 262 GLTFSNELISRDEGLHTDFACLLFSHL--ENRPSKKIVEDVIVEAVGIEQEFLTDALPCG 319 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN +LM YIEFVADRLLV LG +++N+ NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 320 LLGMNAKLMCQYIEFVADRLLVALGNSKVYNSTNPFDFMENISLAGKTNFFEKRVSDYQK 379 Query: 503 ANVTTS------ATDNVFALDIEF 520 A V + + N F+LD +F Sbjct: 380 AGVMANSNQEEKSNSNGFSLDEDF 403
gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa] sp|Q9C167|RIR2_NEUCR Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase small subunit) ref|XP_328593.1| hypothetical protein ( (AY027867) small subunit of ribonucleotide reductase [Neurospora crassa] ) gb|EAA33584.1| hypothetical protein ( (AY027867) small subunit of ribonucleotide reductase [Neurospora crassa] ) (410 aa) Score: 426 bits (1094), Expect: 1.01505e-117 Length: 306, Idn/Pos/Gap = 202/246/3 (66%/80%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ +I++ YK+ ASFWTAEEIDL+ D+ W NRL + E++F+SH+LAF Sbjct: 82 ENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKFFISHILAF 141 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF +V+IPEARCFYGFQI MENIHSETYSLLID Y+K+P +RT+L Sbjct: 142 FAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEPSQRTYL 201 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDAS-FQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++T+PC+R+KA WA+RWI +S F +RLVAFAAVEGIFFSG+F +IFWLKKRGLMP Sbjct: 202 FNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASIFWLKKRGLMP 261 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLH DFAC L+S L R + I +I DAV E+EF+ +ALP + Sbjct: 262 GLTFSNELISRDEGLHTDFACLLFSHL--NNRPSKQLIQEIIVDAVRIEQEFLTEALPCA 319 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LM YIEFVADRLLV LG ++++ + NPFD+ME ISL GKTNFFEKRVG+YQK Sbjct: 320 LLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFFEKRVGDYQK 379 Query: 503 ANVTTS 508 A V S Sbjct: 380 AGVMNS 385
ref|XP_419948.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) [Gallus gallus] (1058 aa) Score: 426 bits (1094), Expect: 1.11262e-117 Length: 321, Idn/Pos/Gap = 209/254/10 (65%/79%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + L E+YF+SHVLAF Sbjct: 744 ENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES-LKPEEKYFISHVLAF 802 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KD +ER L Sbjct: 803 FAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFL 862 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ET+PCV++KA WAIRWIG A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 863 FNAIETLPCVKKKADWAIRWIGDKKATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 922 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EERV +I +AV E+EF+ +AL Sbjct: 923 GLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERV-----KEIIMNAVLIEQEFLTEAL 977 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRL++ELG+ +++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 978 PVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYKVENPFDFMENISLEGKTNFFEKRVGE 1037 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V + TDN F LD EF Sbjct: 1038 YQRMGVMSKPTDNSFTLDAEF 1058
gb|AAA48294.1| F14 [Vaccinia virus] sp|P29883|RIR2_VACCP Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (319 aa) Score: 426 bits (1094), Expect: 1.14082e-117 Length: 321, Idn/Pos/Gap = 204/252/10 (63%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N++T E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKVTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGF++A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETV-----RSIITDAVSIEQEFLTAAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQKDNHFSLDVDF 319
gb|EAA45486.1| ENSANGP00000023621 [Anopheles gambiae str. PEST] ref|XP_308928.1| ENSANGP00000023621 [Anopheles gambiae str. PEST] (388 aa) Score: 426 bits (1094), Expect: 1.27153e-117 Length: 314, Idn/Pos/Gap = 205/252/4 (65%/80%/1%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ +FPI++P I++ YK+ ASFWT EE+DL+ DM W L +ER+F+SHVLAFFAAS Sbjct: 78 RFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWET-LKPSERHFISHVLAFFAAS 136 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF ++V++ EARCFYGFQIAMEN+HSE YSLLID Y++D +ER LF A+ Sbjct: 137 DGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKEREFLFNAI 196 Query: 328 ETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ET+PCV+RKA WA+ WI S A+F ER+VAFAAVEGIFFSGSF AIFWLKKRGLMPGLTF Sbjct: 197 ETLPCVKRKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTF 256 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELISRDEGLHCDFAC ++ L ++ ER+ +IRDAV E+EF+ ALPV ++GM Sbjct: 257 SNELISRDEGLHCDFACLMFKYLV--QKPSKERVTEIIRDAVLIEQEFLTKALPVDMLGM 314 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N LMS YIEFVADRLL+ELG +++++T NPF +ME ISL+GKTNFFEK+VGEYQK V Sbjct: 315 NCDLMSQYIEFVADRLLLELGCEKIYHTKNPFSFMEFISLEGKTNFFEKKVGEYQKWGVM 374 Query: 507 TSATDNVFALDIEF 520 + DNVF LD +F Sbjct: 375 ANRLDNVFTLDADF 388
sp|P33799|RIR2_VARV Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (319 aa) Score: 425 bits (1093), Expect: 1.30375e-117 Length: 321, Idn/Pos/Gap = 205/252/10 (63%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A+ +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 AKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETV-----RSIITDAVSIEQEFLTVAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M Y+EFVADRL+ ELG+ R++N NP D+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
gb|AAA74020.1| ribonuleotide reductase small subunit (399 aa) Score: 425 bits (1092), Expect: 1.85093e-117 Length: 317, Idn/Pos/Gap = 204/256/7 (64%/80%/2%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ W +L E++FVSHVLAFFAAS Sbjct: 86 RFVVFPIQYNDIWQMYKKAEASFWTAEEVDLSKDISDWE-KLKSEEKHFVSHVLAFFAAS 144 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF ++V++ EARCFYG+QIA+ENIHSE YSLLID YVKDP ER LF A+ Sbjct: 145 DGIVNENLVERFSKEVQVTEARCFYGYQIAVENIHSEMYSLLIDTYVKDPTERDFLFNAI 204 Query: 328 ETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ETMPCV+ KA WA+RWI + +SF ER+VAFAAVEGIFFSGSF +IFWLKKRG+MPGLTF Sbjct: 205 ETMPCVKEKADWALRWINDEQSSFGERVVAFAAVEGIFFSGSFASIFWLKKRGVMPGLTF 264 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELISRDEGLHCDFAC ++S L + + ER++ +IRDAV E+ F+ +ALPV+LIGM Sbjct: 265 SNELISRDEGLHCDFACLMFSHL--KNKPSQERVYDIIRDAVRIEQSFLTEALPVNLIGM 322 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N +LM+ YIEFVADRLL+ELG ++WN NPFD+M+ ISL+GKTNFFEKRVGEYQK V Sbjct: 323 NCKLMAQYIEFVADRLLLELGCPKIWNVENPFDFMDNISLEGKTNFFEKRVGEYQKMGVM 382 Query: 507 TSAT---DNVFALDIEF 520 +S + + F+L+ +F Sbjct: 383 SSQSGGGSHQFSLEEDF 399
emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula solidissima] pir||S24585 ribonucleoside-diphosphate reductase (EC 1.17.4.1) chain M2 - Atlantic surf clam sp|P07201|RIR2_SPISO Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (P41) (384 aa) Score: 424 bits (1091), Expect: 2.56278e-117 Length: 322, Idn/Pos/Gap = 206/253/7 (63%/78%/2%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A+ R+ + PI++ I++ YK+ ASFWTAEE+DL+ DM HW + L + E++F+SHVLA Sbjct: 66 ADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWES-LKKEEKHFISHVLA 124 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER Sbjct: 125 FFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDF 184 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLM 381 LF A+ETMPCV+ KA WA+RWI D +S+ ER+VAFAAVEGIFFSGSF +IFWLKKRG+M Sbjct: 185 LFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKRGIM 244 Query: 382 PGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 PGLTFSNELISRDEGLHCDFAC ++S L + ERIH +I +AV+ E+ F+ +ALP Sbjct: 245 PGLTFSNELISRDEGLHCDFACLMFSHLV--NKPSQERIHQIIDEAVKIEQVFLTEALPC 302 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 LIGMN LM YIEFVADRLL+EL D+L+N NPFD+ME ISL+GKTNFFEKRVGEYQ Sbjct: 303 RLIGMNCDLMRQYIEFVADRLLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEYQ 362 Query: 502 KANVTT---SATDNVFALDIEF 520 K V + + + F LD +F Sbjct: 363 KMGVMSGGNTGDSHAFTLDADF 384
gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus] ref|NP_536463.1| C10L [Monkeypox virus] gb|AAL40494.1| C10L [Monkeypox virus] (319 aa) Score: 424 bits (1091), Expect: 2.64975e-117 Length: 321, Idn/Pos/Gap = 204/251/10 (63%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EE V +I +AV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETV-----RFIITNAVSIEQEFLTVAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK V S DN F+LD++F Sbjct: 300 YQKMGV-MSQEDNHFSLDVDF 319
ref|NP_955770.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] (351 aa) Score: 424 bits (1089), Expect: 4.08917e-117 Length: 339, Idn/Pos/Gap = 210/263/11 (61%/77%/3%) Query: 186 SERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW 245 SE + VRS+ + + + + R+ +FPI++P I+ YK+ ASFWTAEE+DL+ D+ HW Sbjct: 20 SETEENVVRSNEEPLLR-KSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHW 78 Query: 246 RNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSET 305 N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V++PEARCFYGFQI +EN+HSE Sbjct: 79 -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137 Query: 306 YSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIF 364 YSLLID Y++DP++R LF A+ETMP V++KA WA+RWI ++F ER+VAFAAVEGIF Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIF 197 Query: 365 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIH 421 FSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+E+RV Sbjct: 198 FSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRV-----R 252 Query: 422 SMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWM 481 +I DAV+ E+EF+ +ALPV LIGMN LM YIEFVADRLL ELG+ +++ NPFD+M Sbjct: 253 EIIADAVQIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFM 312 Query: 482 ELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 E ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 313 ENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 351
gb|AAF33894.1| TF4L [Vaccinia virus (strain Tian Tan)] (319 aa) Score: 423 bits (1088), Expect: 5.70927e-117 Length: 321, Idn/Pos/Gap = 204/251/10 (63%/78%/3%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A +R+ +FPI++ I+ YK+ ASFWT EE+D++ D++ W N+LT E+YF+ HVLA Sbjct: 6 APNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW-NKLTPDEKYFIKHVLA 64 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIV ENLAERF +V+I EARCFYGFQ+A+ENIHSE YSLLID YVKD E+ + Sbjct: 65 FFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNY 124 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ETMPCV++KA WA +WI A + ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 125 LFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 184 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGL CDFAC ++ L P+EE V S+I DAV E+EF+ AL Sbjct: 185 GLTFSNELISRDEGLRCDFACLMFKHLLHPPSEETV-----RSIITDAVSIEQEFLTAAL 239 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN ++M YIEFVADRL+ ELG+ +++N NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 240 PVKLIGMNCEMMETYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGE 299 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V S DN F+LD++F Sbjct: 300 YQQMGV-MSQEDNHFSLDVDF 319
ref|XP_343041.1| PREDICTED: similar to M2 ribonucleotide reductase [Rattus norvegicus] (390 aa) Score: 423 bits (1087), Expect: 7.51902e-117 Length: 321, Idn/Pos/Gap = 205/258/10 (63%/80%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW L ER+F+SHVLAF Sbjct: 76 ENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE-ALKPDERHFISHVLAF 134 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KD +ER +L Sbjct: 135 FAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYL 194 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+RWIG +A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 195 FNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 254 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+E+RV +I ++V E+EF+ +AL Sbjct: 255 GLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRV-----KEIITNSVRIEQEFLTEAL 309 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRL++ELG+++++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 310 PVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEKRVGE 369 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V +++T+N F LD +F Sbjct: 370 YQRMGVMSNSTENSFTLDADF 390
gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4] ref|XP_404204.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4] (406 aa) Score: 422 bits (1086), Expect: 9.73855e-117 Length: 306, Idn/Pos/Gap = 204/246/3 (66%/80%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ +I++ YK+ ASFWTAEEIDL+ D+ W NRL E ERYF+S VLAF Sbjct: 79 ENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERYFISRVLAF 138 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF +V+IPEARCFYGFQI +ENIH+ETYSLLID Y+K+P++RT+L Sbjct: 139 FAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPKQRTYL 198 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++T+PC+R+KA WAI+WI +++F +RLVAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 199 FDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMP 258 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLH DFAC L+S L R + + +I +AV EKEF+ DALP + Sbjct: 259 GLTFSNELISRDEGLHTDFACLLFSHL--NWRPSKKVVEDIIVEAVAIEKEFLTDALPCA 316 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN +LM YIEFVADRLLV LG + +N NPFD+ME ISL GKTNFFEKRVG+YQK Sbjct: 317 LLGMNAKLMCQYIEFVADRLLVALGNKKYFNATNPFDFMESISLAGKTNFFEKRVGDYQK 376 Query: 503 ANVTTS 508 A V S Sbjct: 377 AGVMAS 382
ref|ZP_00310044.1| COG0208: Ribonucleotide reductase, beta subunit [Cytophaga hutchinsonii] (296 aa) Score: 422 bits (1084), Expect: 1.76106e-116 Length: 298, Idn/Pos/Gap = 200/240/3 (67%/80%/1%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 YK+ ASFWTAEEIDL+ D+ W N L + ER+F+SHVLAFFAASDGIV ENLA F+ Sbjct: 2 YKQEEASFWTAEEIDLSQDLIDWAN-LNDGERHFISHVLAFFAASDGIVNENLAVNFLEK 60 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V+IPEA+CFYGFQI MENIHSETYSLLID Y+KDP+E+ LF A++T+PCV++KA WA+R Sbjct: 61 VQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKEKDRLFNAIDTVPCVKKKADWALR 120 Query: 343 WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 +I + SF E ++AFAAVEGIFFSGSFC++FWLKKRGLMPGL+FSNELISRDEGLHCDFA Sbjct: 121 FI-DNGSFIENIIAFAAVEGIFFSGSFCSVFWLKKRGLMPGLSFSNELISRDEGLHCDFA 179 Query: 403 CHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRL 462 C LY+ ++PAER+ +I +AVE EKEFV D+LPV LIGMN +LM YIEFVADRL Sbjct: 180 CLLYTKY-INNKLPAERVIQIILEAVEIEKEFVTDSLPVDLIGMNARLMQQYIEFVADRL 238 Query: 463 LVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 LV LG + +N NPFD+ME+ISLQGKTNFFEKRV EYQK+ V F+LD +F Sbjct: 239 LVALGVPKQFNATNPFDFMEMISLQGKTNFFEKRVSEYQKSGVMAEKDSQKFSLDEDF 296
emb|CAG90185.1| unnamed protein product [Debaryomyces hansenii CBS767] ref|XP_461732.1| unnamed protein product [Debaryomyces hansenii] (426 aa) Score: 421 bits (1083), Expect: 1.89839e-116 Length: 322, Idn/Pos/Gap = 205/243/7 (63%/75%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ +I++ YK+ ASFWTAEEIDL D W +L ERYF+S +LAF Sbjct: 107 ENTRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNEKLNNNERYFISRILAF 166 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL E F +V++PEA+CFYGFQI MENIHSETYSLLID Y+KDP+E L Sbjct: 167 FAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKEADFL 226 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++ +PC+++KA WA+RWI DA F ERLVAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 227 FNAIDNIPCIKKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFASIFWLKKRGLMP 286 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELI RDEGLH DFAC L+S L + R A + +I +AV EKEF DALP+S Sbjct: 287 GLTFSNELICRDEGLHTDFACLLFSHL--QNRPDAVIVERIITEAVTIEKEFFVDALPIS 344 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LM Y+EFVADRLLV LG +++N NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 345 LLGMNCNLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVSDYQK 404 Query: 503 ANVTTSATD----NVFALDIEF 520 A V S TD N F+ D +F Sbjct: 405 AGVMASTTDSKSSNSFSFDEDF 426
gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans] (406 aa) Score: 421 bits (1083), Expect: 2.24315e-116 Length: 306, Idn/Pos/Gap = 204/245/3 (66%/80%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ +I++ YK+ ASFWTAEEIDL+ D+ W NRL E ERYF+S VLAF Sbjct: 79 ENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERYFISRVLAF 138 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF +V+IPEARCFYGFQI +ENIH+ETYSLLID Y+K+P++RT+L Sbjct: 139 FAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPKQRTYL 198 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++T+PC+R+KA WAI+WI +++F +RLVAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 199 FDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMP 258 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLH DFAC L+S L R + + +I +AV EKEF+ DALP + Sbjct: 259 GLTFSNELISRDEGLHTDFACLLFSHL--NWRPSKKVVEDIIVEAVAIEKEFLTDALPCA 316 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN +LM YIEFVADRLLV LG +N NPFD+ME ISL GKTNFFEKRVG+YQK Sbjct: 317 LLGMNAKLMCQYIEFVADRLLVALGNKEYFNATNPFDFMESISLAGKTNFFEKRVGDYQK 376 Query: 503 ANVTTS 508 A V S Sbjct: 377 AGVMAS 382
gb|AAL05057.1| ribonucleotide reductase 2 [Aedes aegypti] (397 aa) Score: 420 bits (1079), Expect: 6.1563e-116 Length: 318, Idn/Pos/Gap = 200/251/4 (62%/78%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWT EE+DL+ D+ W +L E++F+SHVLAF Sbjct: 83 ENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLADWE-KLKSGEKHFISHVLAF 141 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMEN+HSE YSLLID Y++D +ER +L Sbjct: 142 FAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKEREYL 201 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++ +PCV++KA WA+ WI S A+F ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 202 FNAIDNLPCVKKKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 261 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLH DFAC ++ L ++ ER+ +IR+AV E+EF+ ALPV Sbjct: 262 GLTFSNELISRDEGLHTDFACLMFKYLV--QKPSQERVIEIIREAVLIEQEFLTKALPVD 319 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LMS YIEFVADRLL+ELG D+++NT NPF +ME ISL+GKTNFFEK+VGEYQK Sbjct: 320 LLGMNCDLMSQYIEFVADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEKKVGEYQK 379 Query: 503 ANVTTSATDNVFALDIEF 520 V + DNVF LD +F Sbjct: 380 WGVMANRLDNVFTLDADF 397
dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes] (418 aa) Score: 418 bits (1074), Expect: 2.33939e-115 Length: 324, Idn/Pos/Gap = 207/251/9 (63%/77%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPI++ +I++ YK+ ASFWTAEE+DL+ D+ W NRL ++ER+F+S VLAF Sbjct: 97 ESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDSERFFISRVLAF 156 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF +V++ EARCFYGFQI MENIHSETYSLLID Y+KDP ER L Sbjct: 157 FAASDGIVNENLLERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDPVERDFL 216 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDAS-FQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ET+PC++RKA WA+RWI + S F ERLVAFAAVEGIFFSGSF +IFW+KKRGLMP Sbjct: 217 FDAIETIPCIKRKAEWALRWISDEHSVFGERLVAFAAVEGIFFSGSFASIFWMKKRGLMP 276 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GL FSNELISRDEG+H DFAC L+S L R + + +I++AV E+EF+ DALPVS Sbjct: 277 GLAFSNELISRDEGMHTDFACLLFSHL--RRRPHPDTVERIIKEAVAIEQEFLTDALPVS 334 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 LIGMN LM YIEFVADRLLV LG +L+N+ NPFD+M++ISLQGKTNFFEKRV +Y K Sbjct: 335 LIGMNATLMCQYIEFVADRLLVALGNKKLYNSTNPFDFMDMISLQGKTNFFEKRVSDYSK 394 Query: 503 ANV------TTSATDNVFALDIEF 520 A V TT+ F LD +F Sbjct: 395 AGVNHSGDNTTTQASKTFVLDEDF 418
emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus] pir||S27153 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - golden hamster sp|Q60561|RIR2_MESAU Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) (386 aa) Score: 417 bits (1073), Expect: 2.71849e-115 Length: 321, Idn/Pos/Gap = 205/254/14 (63%/79%/4%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW L ER+F+SHVLAF Sbjct: 76 ENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWE-ALKPDERHFISHVLAF 134 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KD +ER +L Sbjct: 135 FAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYL 194 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+RWIG +A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 195 FNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 254 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+E+RV +I +AV E+EF+ +AL Sbjct: 255 GLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRV-----QEIITNAVRIEQEFLTEAL 309 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRL++ELG+++++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 310 PVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEKRVGE 369 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V + N F LD +F Sbjct: 370 YQRMGVMS----NSFTLDADF 386
gb|AAH61353.1| Hypothetical protein MGC75900 [Xenopus tropicalis] ref|NP_989048.1| hypothetical protein MGC75900 [Xenopus tropicalis] (378 aa) Score: 417 bits (1072), Expect: 3.76401e-115 Length: 317, Idn/Pos/Gap = 205/252/10 (64%/79%/3%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ + PI++ I++ YK+ ASFWTAEE+DL+ D+ HW L ERYF+S+VLAFFAAS Sbjct: 68 RFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLPHWE-ALKPEERYFISYVLAFFAAS 126 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER LF A+ Sbjct: 127 DGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAI 186 Query: 328 ETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ET+PCV++KA WA+RWI +A F ER+VAFAAVEGIFFSGSF +IFWLKKRGLMPGLTF Sbjct: 187 ETLPCVKKKAEWALRWISDREAPFCERIVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 246 Query: 387 SNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 SNELISRDEGLH DFAC L+ + P+E+RV +I DAV+ E+EF+ +ALPV L Sbjct: 247 SNELISRDEGLHTDFACLLFKHVVHKPSEQRV-----REIIIDAVKIEQEFLTEALPVEL 301 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN +LM YIEFVADRLL+ELG+ +++ + NPFD+ME ISL+GKTNFFEK+V EYQK Sbjct: 302 IGMNCKLMKQYIEFVADRLLLELGFKKIFKSENPFDFMENISLEGKTNFFEKKVAEYQKM 361 Query: 504 NVTTSATDNVFALDIEF 520 V + ATD F L+ EF Sbjct: 362 GVMSKATDKQFTLNAEF 378
gb|AAH72071.1| MGC78958 protein [Xenopus laevis] (406 aa) Score: 417 bits (1072), Expect: 3.92436e-115 Length: 317, Idn/Pos/Gap = 202/251/10 (63%/79%/3%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ + PI++ I++ YK+ ASFWTAEE+DL+ D+ HW L ERYF+++VLAFFAAS Sbjct: 96 RFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWET-LKPEERYFIAYVLAFFAAS 154 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF ++V++ E RCFYGFQIAMENIHSE YSLLID Y+KDP+ER LF A+ Sbjct: 155 DGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAI 214 Query: 328 ETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ET+PCV++KA W++RWI +A + ERLVAFAAVEGIFFSGSF +IFWLKKRGLMPGLTF Sbjct: 215 ETLPCVKKKAEWSLRWISDREAPYCERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 274 Query: 387 SNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 SNELISRDEGLH DFAC L+ + P+E+RV +I DAV+ E+EF+ +ALPV L Sbjct: 275 SNELISRDEGLHTDFACLLFKHVVHKPSEQRV-----REIIIDAVKIEQEFLTEALPVEL 329 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN LM YIEFVADRLL+ELG+ +++ + NPFD+ME ISL+GKTNFFEK+VGEYQK Sbjct: 330 IGMNCTLMKQYIEFVADRLLLELGFKKIFKSENPFDFMENISLEGKTNFFEKKVGEYQKM 389 Query: 504 NVTTSATDNVFALDIEF 520 V AT+N F L+ +F Sbjct: 390 GVMAKATENQFTLNADF 406
ref|XP_540076.1| PREDICTED: hypothetical protein XP_540076 [Canis familiaris] (512 aa) Score: 417 bits (1071), Expect: 5.76045e-115 Length: 321, Idn/Pos/Gap = 209/256/10 (65%/79%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW + L ERYF+SHVLAF Sbjct: 198 ENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES-LKPEERYFISHVLAF 256 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V+I EARCFYGFQIAMENIHSE YSLLID Y+KD +ER L Sbjct: 257 FAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFL 316 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+RWIG +A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 317 FNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 376 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+E+RV +I +AV E+EF+ +AL Sbjct: 377 GLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRV-----KEIIINAVRIEQEFLTEAL 431 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN LM YIEFVADRL++ELG+ +++ NPFD+ME ISL+GKTNFFEKRVGE Sbjct: 432 PVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGE 491 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V +S T+N F LD +F Sbjct: 492 YQRMGVMSSPTENSFTLDADF 512
ref|XP_397443.1| similar to ENSANGP00000013211 [Apis mellifera] (332 aa) Score: 416 bits (1070), Expect: 6.75003e-115 Length: 318, Idn/Pos/Gap = 200/252/4 (62%/79%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI+ P I++ YK+ ASFWT EE+DL+ D+ W N LT +E++F+SHVLAF Sbjct: 18 ENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNN-LTASEKHFISHVLAF 76 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V+I EARCFYGFQ+AMEN+HSE YSLLID Y+ D +ER L Sbjct: 77 FAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIADAKERDFL 136 Query: 324 FRAMETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+E +PCV +KA+WA+ WI + A+F ER+VAFAAVEGIFFSGSF AIFWLKKRGLMP Sbjct: 137 FNAIENLPCVAKKAHWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWLKKRGLMP 196 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLHCDFAC ++ + ++ ER+ S+I+DAV+ E+EF+ DALPV Sbjct: 197 GLTFSNELISRDEGLHCDFACLMFKHIV--QKPSCERVTSIIKDAVKIEQEFLTDALPVE 254 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 +IGMN +LM YIEFVADRLLVELG +++ + NPFD+ME ISL+GKTNFFEK+VGEYQK Sbjct: 255 MIGMNCKLMCQYIEFVADRLLVELGCKKIYMSENPFDFMEHISLEGKTNFFEKKVGEYQK 314 Query: 503 ANVTTSATDNVFALDIEF 520 V ++ F ++ EF Sbjct: 315 WGVMQDRIESNFTVNAEF 332
gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314] gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314] (413 aa) Score: 416 bits (1069), Expect: 1.01593e-114 Length: 321, Idn/Pos/Gap = 202/246/6 (62%/76%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E RY +FPI++ +I+ FYK+ ASFWTAEEIDL+ D+D W N+L E ERYF+S VLAF Sbjct: 95 ENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNKLNENERYFISRVLAF 154 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL E F +V++PEA+ FYGFQI MENIHSETYSLLI+ Y+KDP+E +L Sbjct: 155 FAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDPQEADYL 214 Query: 324 FRAMETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ +PC+++KA WAI+WI D A + ERLVAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 215 FNAIANIPCIQKKADWAIKWIQDDEALYGERLVAFAAVEGIFFSGSFASIFWLKKRGLMP 274 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELI RDEGLH DFAC L++ L + R E + +I +AV+ EKE+ DALPVS Sbjct: 275 GLTFSNELICRDEGLHTDFACLLFAHL--QNRPSPEIVERIITEAVDVEKEYFTDALPVS 332 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LM YIEFVADRLL+ LG +++N NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 333 LLGMNCNLMCQYIEFVADRLLLALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVSDYQK 392 Query: 503 ANV---TTSATDNVFALDIEF 520 A V T + + F D +F Sbjct: 393 AGVMAKTENKEADAFTFDEDF 413
emb|CAC21258.1| 20L protein [Yaba-like disease virus] ref|NP_073405.1| 20L protein [Yaba-like disease virus] sp|Q9DHU2|RIR2_YLDV Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (325 aa) Score: 415 bits (1066), Expect: 1.76208e-114 Length: 317, Idn/Pos/Gap = 199/247/8 (62%/77%/2%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 ++Y +FPI + I++ YK+ VASFWT EE+DL+ D W +L++ E+ F+ H+LAFFAA Sbjct: 14 NKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWL-KLSDNEKNFIKHILAFFAA 72 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 SDGIV ENLAERF +V+I EARCFYGFQIAMENIHSE YSLLID Y+ D +E+ +LF A Sbjct: 73 SDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKEKNYLFNA 132 Query: 327 METMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 +E M CV++KA WA +WI S + ++ ERLVAFAAVEGIFFSGSF AIFW+KKRGLMPGLT Sbjct: 133 IENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKRGLMPGLT 192 Query: 386 FSNELISRDEGLHCDFACHLYSML--PAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 FSNELISRDEGLHCDFAC ++ L P V + +I +AV EK F+ +A+PV L Sbjct: 193 FSNELISRDEGLHCDFACIMFKHLLNPPLNSV----VRDIIIEAVNIEKNFLTEAIPVKL 248 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN LM YIEFVADRLL+ELG D+ + + NPFD+ME ISL+GKTNFFEKRV EYQK Sbjct: 249 IGMNCDLMKQYIEFVADRLLLELGCDKYYCSKNPFDFMENISLEGKTNFFEKRVSEYQKM 308 Query: 504 NVTTSATDNVFALDIEF 520 +V ++ DNVF+LDI+F Sbjct: 309 SVMSNKKDNVFSLDIDF 325
pir||B49412 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - malaria parasite (Plasmodium falciparum) gb|AAA50170.1| ribonucleotide reductase small subunit sp|P50650|RIR2_PLAF4 Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase R2 subunit) (349 aa) Score: 415 bits (1066), Expect: 2.15274e-114 Length: 317, Idn/Pos/Gap = 192/251/3 (60%/79%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 +E+DR+TL+PI +P +++FYK+ ASFWTAEEIDL++D+ + +L E E++F+ HVLAF Sbjct: 36 KESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFE-KLNENEKHFIKHVLAF 94 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIVLENLA +F+R+V+I EA+ FY FQIA+ENIHSETYSLLID Y+KD +ER +L Sbjct: 95 FAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNL 154 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+E +P V+ KA WA +WI SF ER+VA A VEGI FSGSFCAIFW KK+ + G Sbjct: 155 FHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHG 214 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEGLH DF C +YS+L + ++P + I +++++AVE E+ F+C++LP L Sbjct: 215 LTFSNELISRDEGLHTDFNCLIYSLL--DNKLPEQIIQNIVKEAVEVERSFICESLPCDL 272 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN +LMS YIEFVADRLL LG +++++ NPF+WM+LISLQGKTNFFEKRV +YQK+ Sbjct: 273 IGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQKS 332 Query: 504 NVTTSATDNVFALDIEF 520 V D VF L+ EF Sbjct: 333 GVMAQRKDQVFCLNTEF 349
ref|NP_701941.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7] gb|AAN36665.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7] (349 aa) Score: 414 bits (1065), Expect: 2.69669e-114 Length: 317, Idn/Pos/Gap = 191/251/3 (60%/79%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 +E+DR+TL+PI +P +++FYK+ ASFWTAEEIDL++D+ + +L E E++F+ HVLAF Sbjct: 36 KESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFE-KLNENEKHFIKHVLAF 94 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIVLENLA +F+R+V+I EA+ FY FQIA+ENIHSETYSLLID Y+KD +ER +L Sbjct: 95 FAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNL 154 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+E +P V+ KA WA +WI SF ER+VA A VEGI FSGSFCAIFW KK+ + G Sbjct: 155 FHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHG 214 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEGLH DF C +YS+L + ++P + + +++++AVE E+ F+C++LP L Sbjct: 215 LTFSNELISRDEGLHTDFNCLIYSLL--DNKLPEQMVQNIVKEAVEVERSFICESLPCDL 272 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN +LMS YIEFVADRLL LG +++++ NPF+WM+LISLQGKTNFFEKRV +YQK+ Sbjct: 273 IGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQKS 332 Query: 504 NVTTSATDNVFALDIEF 520 V D VF L+ EF Sbjct: 333 GVMAQRKDQVFCLNTEF 349
emb|CAG98465.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140] ref|XP_455757.1| unnamed protein product [Kluyveromyces lactis] (401 aa) Score: 414 bits (1065), Expect: 2.83513e-114 Length: 323, Idn/Pos/Gap = 207/244/8 (64%/75%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ +I+E YKR ASFWTAEEIDL+ D+ W NR+ E ER+F+S +LAF Sbjct: 81 ENKRRFVLFPIKYHEIWEAYKRAEASFWTAEEIDLSKDLHDWNNRMNENERFFISRILAF 140 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL E F +V+ PEA+CFYGFQI MENIHSETYSLLID Y+KDP+E L Sbjct: 141 FAASDGIVNENLVENFSAEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKESEFL 200 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ET+P ++ KA WAIRWI DA F ERLVAFAAVEG+FFSGSF AIFWLKK+GLMP Sbjct: 201 FNAIETIPQIKEKAEWAIRWIQDDDALFGERLVAFAAVEGVFFSGSFAAIFWLKKKGLMP 260 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELI RDEGLH DFAC L++ L + + E + +I +AVE EK + DALPVS Sbjct: 261 GLTFSNELICRDEGLHTDFACLLFAHL--KNKPNPEIVEKIITEAVEIEKRYFMDALPVS 318 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LM+ Y+EFVADRLLV LG + +N NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 319 LLGMNADLMNQYVEFVADRLLVALGNKKYFNVTNPFDFMENISLAGKTNFFEKRVSDYQK 378 Query: 503 ANV-----TTSATDNVFALDIEF 520 A V T A D FA D +F Sbjct: 379 AGVIAKSSNTEAQDGAFAFDEDF 401
gb|AAF15363.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum] (320 aa) Score: 414 bits (1064), Expect: 2.98067e-114 Length: 317, Idn/Pos/Gap = 191/251/3 (60%/79%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 +E+DR+TL+PI +P +++FYK+ ASFWTAEEIDL++D+ + +L E E++F+ HVLAF Sbjct: 7 KESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFE-KLNENEKHFIKHVLAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIVLENLA +F+R+V+I EA+ FY FQIA+ENIHSETYSLLID Y+KD +ER +L Sbjct: 66 FAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+E +P V+ KA WA +WI SF ER+VA A VEGI FSGSFCAIFW KK+ + G Sbjct: 126 FHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHG 185 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEGLH DF C +YS+L + ++P + + +++++AVE E+ F+C++LP L Sbjct: 186 LTFSNELISRDEGLHTDFNCLIYSLL--DNKLPEQMVQNIVKEAVEVERSFICESLPCDL 243 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN +LMS YIEFVADRLL LG +++++ NPF+WM+LISLQGKTNFFEKRV +YQK+ Sbjct: 244 IGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQKS 303 Query: 504 NVTTSATDNVFALDIEF 520 V D VF L+ EF Sbjct: 304 GVMAQRKDQVFCLNTEF 320
emb|CAD87804.1| novel protein similar to ribonucleotide reductase protein r2 class I (rrm2, ZDB-GENE-990415-25) [Danio rerio] ref|NP_001007164.1| ribonucleotide reductase M2 b [Danio rerio] (349 aa) Score: 414 bits (1064), Expect: 3.18642e-114 Length: 318, Idn/Pos/Gap = 194/252/4 (61%/79%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++P I++ YK+ ASFWT EE+DL+ D+ HW + L E++F+SHVLAF Sbjct: 35 ENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLTHW-DGLKSEEKHFISHVLAF 93 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL +RF ++V++PEAR FYGFQI +EN+HSE YS+LI+ Y++D +ER +L Sbjct: 94 FAASDGIVNENLVQRFSQEVQLPEARSFYGFQILIENVHSEMYSMLINTYIRDLKERDYL 153 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++TMPCVRRKA WA++WI ++++F ERLVAFAAVEGIFFSGSF AI+WLKKRGLMP Sbjct: 154 FNAVQTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYWLKKRGLMP 213 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLT+SNELISRDEGLHC+FAC +YS L + V +R++ +I AV E+EF+ +ALPV+ Sbjct: 214 GLTYSNELISRDEGLHCNFACLIYSYLVKKPSV--DRVNDIIAKAVSIEQEFLTEALPVN 271 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 LIGMN LM YIEFVADRLL +LG + + + NPFD+ME ISL+GKTNFFEKRV EYQ+ Sbjct: 272 LIGMNCSLMKQYIEFVADRLLTDLGLPKAYCSENPFDFMESISLEGKTNFFEKRVAEYQR 331 Query: 503 ANVTTSATDNVFALDIEF 520 V ++ D F LD +F Sbjct: 332 LGVMSNVKDCEFTLDADF 349
ref|XP_222462.2| PREDICTED: similar to M2 ribonucleotide reductase [Rattus norvegicus] (297 aa) Score: 414 bits (1063), Expect: 4.025e-114 Length: 302, Idn/Pos/Gap = 200/246/10 (66%/81%/3%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 YK+ ASFWTAEE+DL+ D+ HW L ER+F+SHVLAFFAASDGIV ENL ERF ++ Sbjct: 2 YKKAEASFWTAEEVDLSKDIQHWE-ALKPDERHFISHVLAFFAASDGIVNENLVERFSQE 60 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V++ EARCFYGFQIAMENIHSE YSLLID Y+KD +ER +LF A+ETMPCV++KA WA+R Sbjct: 61 VQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALR 120 Query: 343 WIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 WIG +A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF Sbjct: 121 WIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180 Query: 402 ACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFV 458 AC ++ L P+E+RV +I +AV E+EF+ +ALPV LIGMN LM YIEFV Sbjct: 181 ACLMFKHLVHKPSEQRV-----KEIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFV 235 Query: 459 ADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDI 518 ADRL++ELG+++++ NPFD+ME ISL+GKTNFFEKRVGEYQ+ V +++T+N F LD Sbjct: 236 ADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSNSTENSFTLDA 295 Query: 519 EF 520 +F Sbjct: 296 DF 297
emb|CAH10473.1| hypothetical protein [Homo sapiens] (297 aa) Score: 413 bits (1061), Expect: 8.04504e-114 Length: 299, Idn/Pos/Gap = 198/241/4 (66%/80%/1%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 YK+ ASFWTAEE+DL+ D+ HW N+L E+YF+SH+LAFFAASDGIV ENL ERF ++ Sbjct: 2 YKQAQASFWTAEEVDLSKDLPHW-NKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V++PEARCFYGFQI +EN+HSE YSLLID Y++DP++R LF A+ETMP V++KA WA+R Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120 Query: 343 WIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 WI ++F ER+VAFAAVEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF Sbjct: 121 WIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180 Query: 402 ACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADR 461 AC ++ L + P ER+ +I DAV+ E+EF+ +ALPV LIGMN LM YIEFVADR Sbjct: 181 ACLMFQYLV--NKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADR 238 Query: 462 LLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 LLVELG+ +++ NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 239 LLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 297
gb|AAD30422.1| ribonucleotide reductase R2 subunit [Aedes albopictus] (398 aa) Score: 412 bits (1060), Expect: 9.42708e-114 Length: 318, Idn/Pos/Gap = 197/250/4 (61%/78%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWT EE+DL+ D+ W +L E++F+SHVLAF Sbjct: 84 ENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLADWE-KLKSGEKHFISHVLAF 142 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV NL ERF ++V++ EARCFYGFQIAMEN+HSE YSLLID Y++D +ER +L Sbjct: 143 FAASDGIVNVNLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKEREYL 202 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++ +PCV++KA WA+ WI S A+F ER+VAFAAVEGIFFSG+F +IFWLKKRGLMP Sbjct: 203 FNAIDNLPCVKKKADWALNWISSKQANFGERVVAFAAVEGIFFSGTFASIFWLKKRGLMP 262 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLH DFAC ++ L ++ ER+ +IR+AV E+EF+ ALPV Sbjct: 263 GLTFSNELISRDEGLHTDFACLMFKYLV--QKPSQERVIEIIREAVLIEQEFLTKALPVD 320 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN +LMS YIEF ADRLL+ELG D+++NT NPF +ME ISL+GKTNFFEK+VGEYQK Sbjct: 321 LLGMNCELMSQYIEFEADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEKKVGEYQK 380 Query: 503 ANVTTSATDNVFALDIEF 520 V + DNVF LD +F Sbjct: 381 WGVMANRQDNVFTLDADF 398
prf||1706181A ribonucleotide reductase (290 aa) Score: 412 bits (1058), Expect: 1.51679e-113 Length: 296, Idn/Pos/Gap = 202/241/10 (68%/81%/3%) Query: 229 SFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEA 288 SFWTAEE+DL+ D+ HW + L ERYF+SHVLAFFAASDGIV ENL ERF ++V+I EA Sbjct: 1 SFWTAEEVDLSKDIQHWES-LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEA 59 Query: 289 RCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIG-SD 347 RCFYGFQIAMENIHSE YSLLID Y+KDP+ER LF A+ETMPCV++KA WA+RWIG + Sbjct: 60 RCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKE 119 Query: 348 ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYS 407 A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ Sbjct: 120 ATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFK 179 Query: 408 ML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLV 464 L P+EERV +I +AV E+EF+ +ALPV LIGMN LM YIEFVADRL++ Sbjct: 180 HLVHKPSEERV-----REIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLML 234 Query: 465 ELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 ELG+ +++ NPFD+ME ISL+GKTNFFEKRVGEYQ+ V +S T+N F LD +F Sbjct: 235 ELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENSFTLDADF 290
gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895] ref|NP_982406.1| AAL136Cp [Eremothecium gossypii] (422 aa) Score: 411 bits (1056), Expect: 2.60893e-113 Length: 323, Idn/Pos/Gap = 206/243/8 (63%/75%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ I++ YKR ASFWTAEEIDL+ D+ W NR+TE ER+F+S VLAF Sbjct: 102 ENKRRFVLFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMTENERFFISRVLAF 161 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL E F +V+IPEA+CFYGFQI MENIHSETYSLLID Y+KDP+E HL Sbjct: 162 FAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKEADHL 221 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ET+P ++ KA WAIRWI DA F ERLVAFAAVEGIFFSGSF AIFWLKK+GLMP Sbjct: 222 FNAIETIPEIKEKAEWAIRWIQDKDALFAERLVAFAAVEGIFFSGSFAAIFWLKKKGLMP 281 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELI RDEGLH DFAC L++ L + E + +I +AVE EK + DA+PV+ Sbjct: 282 GLTFSNELICRDEGLHTDFACLLFAHL--NNKPDTEIVEKIITEAVEIEKRYFQDAIPVA 339 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LM+ Y+EFVADRLLV LG + +N NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 340 LLGMNSSLMNQYVEFVADRLLVALGNKKYYNVSNPFDFMENISLAGKTNFFEKRVSDYQK 399 Query: 503 ANVTTSAT-----DNVFALDIEF 520 A V +T F D +F Sbjct: 400 AGVMAKSTKQESESGAFTFDEDF 422
gb|AAR07377.1| 20L [Yaba monkey tumor virus] ref|NP_938276.1| 20L [Yaba monkey tumor virus] (325 aa) Score: 411 bits (1056), Expect: 2.67506e-113 Length: 316, Idn/Pos/Gap = 198/247/8 (62%/78%/2%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 RY +FPI + I+ YK+ VASFWT EE+DL+ D W +L+E E+ F+ H+LAFFAAS Sbjct: 15 RYVVFPIVYKDIWMMYKKAVASFWTVEEVDLSKDFPDWL-KLSENEKKFIKHILAFFAAS 73 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENLAERF +V++ EARCFYGFQIAMENIHSE YSLLID Y+ D +E+ +LF A+ Sbjct: 74 DGIVNENLAERFYSEVQVSEARCFYGFQIAMENIHSEMYSLLIDTYILDSKEKNYLFNAI 133 Query: 328 ETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 E M CV++KA WA +WI S ++++ ERL+AFAAVEGIFFSGSF AIFW+KKRGLMPGLTF Sbjct: 134 ENMNCVKQKANWARKWIESKNSTYGERLIAFAAVEGIFFSGSFAAIFWIKKRGLMPGLTF 193 Query: 387 SNELISRDEGLHCDFACHLYSML--PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SNELISRDEGLHCDFAC ++ L P E V I ++ +AV+ EK F+ +A+PV LI Sbjct: 194 SNELISRDEGLHCDFACMMFKHLSNPPLENV----IRDIVIEAVDIEKNFLTEAMPVKLI 249 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKAN 504 GMN LM YIEFVADRLL+ELG + + + NPFD+ME ISL+GKTNFFEKRV EYQK + Sbjct: 250 GMNCDLMKQYIEFVADRLLLELGCKKYYCSKNPFDFMENISLEGKTNFFEKRVSEYQKMS 309 Query: 505 VTTSATDNVFALDIEF 520 V ++ D+VF+LDI+F Sbjct: 310 VMSNKDDDVFSLDIDF 325
ref|XP_539109.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) [Canis familiaris] (395 aa) Score: 410 bits (1054), Expect: 4.63974e-113 Length: 390, Idn/Pos/Gap = 212/266/62 (54%/68%/15%) Query: 186 SERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW 245 S+ + V+S + + + + R+ +FPI++P I++ YK+ ASFWTAEE+DL+ D+ HW Sbjct: 13 SDTNENEVKSDEEPLLR-KSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW 71 Query: 246 RNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSET 305 N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V++PEARCFYGFQI +EN+HSE Sbjct: 72 -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 130 Query: 306 YSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWI--------------------- 344 YSLLID Y++DP++R LF A+ETMP V++KA WA+RWI Sbjct: 131 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKSTFGAFLGLGSGFGGAS 190 Query: 345 ----------GSD---------------------ASFQERLVAFAAVEGIFFSGSFCAIF 373 GS A+ +ER+VAFAAVEGIFFSGSF AIF Sbjct: 191 LADNLADLLCGSSFTLALSPLASPSAFLLGMVATAAGRERVVAFAAVEGIFFSGSFAAIF 250 Query: 374 WLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVEC 430 WLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+EERV +I +AVE Sbjct: 251 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERV-----REIIVNAVEI 305 Query: 431 EKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKT 490 E+EF+ +ALPV LIGMN LM YIEFVADRLLVELG+ +++ NPFD+ME ISL+GKT Sbjct: 306 EQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKT 365 Query: 491 NFFEKRVGEYQKANVTTSATDNVFALDIEF 520 NFFEKRV EYQ+ V TDNVF LD +F Sbjct: 366 NFFEKRVAEYQRFAVMAETTDNVFTLDADF 395
emb|CAA26307.1| small subunit (P41) [Spisula solidissima] (300 aa) Score: 410 bits (1054), Expect: 5.39162e-113 Length: 302, Idn/Pos/Gap = 201/241/7 (66%/79%/2%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 YK+ ASFWTAEE+DL+ DM HW + L + E++F+SHVLAFFAASDGIV ENL ERF ++ Sbjct: 2 YKKAEASFWTAEEVDLSKDMAHWES-LKKEEKHFISHVLAFFAASDGIVNENLVERFSKE 60 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V++ EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER LF A+ETMPCV+ KA WA+R Sbjct: 61 VQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADWAMR 120 Query: 343 WIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 WI D +S+ ER+VAFAAVEGIFFSGSF +IFWLKKRG+MPGLTFSNELISRDEGLHCDF Sbjct: 121 WINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKRGIMPGLTFSNELISRDEGLHCDF 180 Query: 402 ACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADR 461 AC ++S L + ERIH +I +AV+ E+ F+ +ALP LIGMN LM YIEFVADR Sbjct: 181 ACLMFSHLV--NKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMNCDLMRQYIEFVADR 238 Query: 462 LLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTT---SATDNVFALDI 518 LL+EL D+L+N NPFD+ME ISL+GKTNFFEKRVGEYQK V + + + F LD Sbjct: 239 LLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEYQKMGVMSGGNTGDSHAFTLDA 298 Query: 519 EF 520 +F Sbjct: 299 DF 300
gb|AAF14903.1| ribonucleotide reductase, small subunit [Myxoma virus] ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus] (322 aa) Score: 409 bits (1052), Expect: 7.4652e-113 Length: 321, Idn/Pos/Gap = 201/249/11 (62%/77%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E DRY +FPI++ I+ YK+ VASFWT EE+D++ D+ WR LT E+YF+ H+LAF Sbjct: 9 ESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWR-VLTPDEKYFIKHILAF 67 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLAERF +V+I EARCFYGFQIAMENIHSE YSLLID Y+ D +E+ L Sbjct: 68 FAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIIDLQEKEKL 127 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F+A+ETM C+++KA W +WI DA++ ERL+AFA+VEGIFFSGSF AIFWLKKRG MP Sbjct: 128 FKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWLKKRGKMP 187 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+EERV S+I++AV E+ F+ +AL Sbjct: 188 GLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVA-----SIIKEAVVIEQRFLTEAL 242 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN +LM YIEFVADRL+ ELGY ++++ NPFD+ME ISL+GKTNFFEKRV + Sbjct: 243 PVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSATNPFDFMENISLEGKTNFFEKRVSD 302 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQ+ V DN F+LD +F Sbjct: 303 YQRMGV-VHKQDNTFSLDEDF 322
gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus] (321 aa) Score: 408 bits (1049), Expect: 2.03179e-112 Length: 319, Idn/Pos/Gap = 197/250/6 (61%/78%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E + R+ +FPI + +I+ YK+ VASFWT +E+DL+ D+ W+ +L E+YF+ ++LAF Sbjct: 7 ETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWK-KLNNEEQYFIKNILAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLAERF +V+ EARCFYGFQIAMENIHSE YSLLID Y+ +E+ HL Sbjct: 66 FAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKEKEHL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETM +++K+ WA +WI + ASF ERL+AFAAVEGIFFSGSF AIFWLKKRGLMP Sbjct: 126 FNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKRGLMP 185 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHS-MIRDAVECEKEFVCDALPV 441 GLTFSNELISRDEGLHCDFAC ++ L + P+ I + +I +AV EKEF+ + +PV Sbjct: 186 GLTFSNELISRDEGLHCDFACLIFKHL---KYPPSNDIITIIINEAVSIEKEFLTNIIPV 242 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 LIGMN LMS YIEF+ADRLL+ELG D+++ + NPFD+ME ISL+GKTNFFEKRV EYQ Sbjct: 243 KLIGMNCVLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEYQ 302 Query: 502 KANVTTSATDNVFALDIEF 520 K V ++ DNVF+LD++F Sbjct: 303 KMGVISNKDDNVFSLDVDF 321
ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus] (321 aa) Score: 408 bits (1048), Expect: 2.40077e-112 Length: 320, Idn/Pos/Gap = 197/250/8 (61%/78%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E + R+ +FPI + +I+ YK+ VASFWT +E+DL+ D+ W+ +L E+YF+ ++LAF Sbjct: 7 ETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLSDWK-KLNNEEQYFIKNILAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLAERF +V+ EARCFYGFQIAMENIHSE YSLLID Y+ +E+ +L Sbjct: 66 FAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKEKEYL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETM +++K+ WA +WI + ASF ERL+AFAAVEGIFFSGSF AIFWLKKRGLMP Sbjct: 126 FNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKRGLMP 185 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPA--ERIHSMIRDAVECEKEFVCDALP 440 GLTFSNELISRDEGLHCDFAC ++ L + P E I +I++AV EKEF+ + +P Sbjct: 186 GLTFSNELISRDEGLHCDFACLIFKHL----KYPPSNEIITIIIKEAVSIEKEFLTNIIP 241 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEY 500 V LIGMN LMS YIEF+ADRLL+ELG D+++ + NPFD+ME ISL+GKTNFFEKRV EY Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMSINPFDFMENISLEGKTNFFEKRVSEY 301 Query: 501 QKANVTTSATDNVFALDIEF 520 QK V ++ DNVF+LD++F Sbjct: 302 QKMGVISNKDDNVFSLDVDF 321
ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus] (321 aa) Score: 407 bits (1047), Expect: 3.10946e-112 Length: 321, Idn/Pos/Gap = 192/248/10 (59%/77%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E +R+ +FPI + I+ YK+ +ASFWT EE+DL+ D+ W+ +LT+ ERYF+ ++LAF Sbjct: 7 ESNNRFVIFPIIYNDIWIMYKKAIASFWTTEEVDLSKDLLDWK-KLTDNERYFIKNILAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLA+RF +V+ EARCFYGFQIA+ENIHSE YSLLID Y+ D +E+ HL Sbjct: 66 FAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDEKNHL 125 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 +A++T+ C++ KA WA +WI ++++ ERLVAFAAVEGIFFSG+F +IFWLKKRGLMP Sbjct: 126 LKAIDTIDCIKEKAKWAEKWILDKESTYGERLVAFAAVEGIFFSGAFASIFWLKKRGLMP 185 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+ RI ++I +AV EK F+ AL Sbjct: 186 GLTFSNELISRDEGLHCDFACLMFKQLLYPPS-----TSRIINIIVEAVSIEKSFLTKAL 240 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV LIGMN +LM YIEFVADRLL ELG ++++ + NPFD+ME ISL+GKTNFFEKRV + Sbjct: 241 PVKLIGMNCELMCQYIEFVADRLLSELGCNKIFKSENPFDFMESISLEGKTNFFEKRVSD 300 Query: 500 YQKANVTTSATDNVFALDIEF 520 YQK + + DNVF+LD +F Sbjct: 301 YQKMGIMSKKEDNVFSLDADF 321
gb|AAL01745.1| ribonucleotide reductase small subunit homolog; RR2B [Spodoptera litura nucleopolyhedrovirus] ref|NP_258331.1| ribonucleotide reductase small subunit homolog; RR2B [Spodoptera litura nucleopolyhedrovirus] (333 aa) Score: 407 bits (1047), Expect: 3.43691e-112 Length: 320, Idn/Pos/Gap = 199/247/6 (62%/77%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++P I+ YK+ ASFWT EE+DL+ D+ W + L E+ER F+ HVLAF Sbjct: 17 ENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDLSDW-DSLKESERNFIKHVLAF 75 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQ+A+EN+HSE YSLLID YVKD +E+ L Sbjct: 76 FAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDTYVKDNDEKRRL 135 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMP + +KA W+I+WI S A+F ERL+AFAAVEGIFFSGSF AIFW+KKRGLMP Sbjct: 136 FNAIETMPAIAKKAEWSIKWIKSATATFAERLIAFAAVEGIFFSGSFAAIFWMKKRGLMP 195 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLH DFAC +YS + + +RI +I +AV E EFV +ALPV+ Sbjct: 196 GLTFSNELISRDEGLHTDFACLMYSHIV--NKPTRDRILDIITEAVAIENEFVTEALPVA 253 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 ++GMN LMS YIEFVADRLL+EL +R +NT NPFD+M LISL+GKTNFFEK+V EYQK Sbjct: 254 MLGMNNDLMSKYIEFVADRLLLELIGERHYNTKNPFDFMNLISLEGKTNFFEKKVSEYQK 313 Query: 503 ANVTTSAT--DNVFALDIEF 520 V + D++F LD F Sbjct: 314 YGVMSGNKLEDDIFTLDAAF 333
gb|AAA29754.1| ribonucleotide reductase R2 subunit sp|P50649|RIR2_PLAFG Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase R2 subunit) (322 aa) Score: 407 bits (1046), Expect: 3.89514e-112 Length: 319, Idn/Pos/Gap = 191/248/5 (59%/77%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 +E+DR+TL+PI +P +F FYK+ A FWTAEEID ++D+ + +L E E++F+ HVLAF Sbjct: 7 KESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFE-KLNENEKHFIKHVLAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIVLENLA F+R+V+I EA+ FY FQIA+ENIHSETYSLLID Y+KD +ER +L Sbjct: 66 FAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+E +P V+ KA WA +WI SF ER+VA A VEGI FSGSFCAIFW KK+ + G Sbjct: 126 FHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHG 185 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA--VECEKEFVCDALPV 441 LTFSNELISRDEGLH DF C +YS+L + ++P + + +++++A VE EK F+C++LP Sbjct: 186 LTFSNELISRDEGLHTDFNCLIYSLL--DNKLPEQMVQNIVKEAGGVEVEKSFICESLPC 243 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 LIGMN +LMS YIEFVADRLL LG +++++ NPF+WM+LISLQGKTNFFEKRV +YQ Sbjct: 244 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 303 Query: 502 KANVTTSATDNVFALDIEF 520 K+ V D+VF L+ EF Sbjct: 304 KSGVMAQRKDHVFCLNTEF 322
gb|AAF17899.1| gp015L [Rabbit fibroma virus] ref|NP_051904.1| gp015L [Rabbit fibroma virus] (322 aa) Score: 407 bits (1046), Expect: 4.30533e-112 Length: 319, Idn/Pos/Gap = 196/248/7 (61%/77%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E DRY +FPI++ I++ YK+ VASFWT EE+D++ D+ W + LT E+YF+ H+LAF Sbjct: 9 ESLDRYVVFPIQYNDIWKMYKKAVASFWTPEEVDISKDLKDW-HILTSDEKYFIKHILAF 67 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLAERF +V+I EARCFYGFQIA+ENIHSE YSLLID Y+ D +E+ L Sbjct: 68 FAASDGIVNENLAERFYVEVQIAEARCFYGFQIAIENIHSEMYSLLIDTYIIDIQEKEKL 127 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F+A+ETM C+++KA W +WI DA++ ERL+AFA+VEGIFFSGSF AIFWLKKRG MP Sbjct: 128 FKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWLKKRGKMP 187 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAE-RIHSMIRDAVECEKEFVCDALPV 441 GLTFSNELISRDEGLHCDFAC ++ L P+E R +I++AV E++F+ ALPV Sbjct: 188 GLTFSNELISRDEGLHCDFACLMFKHL---NHTPSETRATDIIKEAVVIEQQFLTKALPV 244 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 LIG+N LM YIEFVADRL+ ELGY ++++ NPFD+ME ISL+GKTNFFEKRV +YQ Sbjct: 245 RLIGINCDLMCQYIEFVADRLVTELGYSKIFSATNPFDFMENISLEGKTNFFEKRVSDYQ 304 Query: 502 KANVTTSATDNVFALDIEF 520 + V S DN F+LD++F Sbjct: 305 RMGV-ASKQDNTFSLDVDF 322
gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus] (321 aa) Score: 407 bits (1045), Expect: 4.92022e-112 Length: 319, Idn/Pos/Gap = 196/249/6 (61%/78%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E + R+ +FPI + +I+ YK+ VASFWT +E+DL+ D+ W+ +L E+YF+ ++LAF Sbjct: 7 ETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWK-KLNNEEQYFIKNILAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLAERF +V+ EARCFYGFQIAMENIHSE YSLLID Y+ +E+ HL Sbjct: 66 FAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKEKEHL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETM +++K+ WA +WI + ASF ERL+AFAAVEGIFF GSF AIFWLKKRGLMP Sbjct: 126 FNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFCGSFAAIFWLKKRGLMP 185 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHS-MIRDAVECEKEFVCDALPV 441 GLTFSNELISRDEGLHCDFAC ++ L + P+ I + +I +AV EKEF+ + +PV Sbjct: 186 GLTFSNELISRDEGLHCDFACLIFKHL---KYPPSNDIITIIINEAVSIEKEFLTNIIPV 242 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 LIGMN LMS YIEF+ADRLL+ELG D+++ + NPFD+ME ISL+GKTNFFEKRV EYQ Sbjct: 243 KLIGMNCVLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEYQ 302 Query: 502 KANVTTSATDNVFALDIEF 520 K V ++ DNVF+LD++F Sbjct: 303 KMGVISNKDDNVFSLDVDF 321
gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314] gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314] (394 aa) Score: 407 bits (1045), Expect: 5.81377e-112 Length: 299, Idn/Pos/Gap = 195/238/3 (65%/79%/1%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+T++PIK+P++++FYK+ +ASFWTAEE+DL+ D+D W N++ E ER+F+S VLAFFAAS Sbjct: 80 RHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNKMNENERFFISRVLAFFAAS 139 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL E F +V+IPEA+ Y FQI MENIHSETYSLLI+ Y KDPEE LF A+ Sbjct: 140 DGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIETYFKDPEEADFLFNAI 199 Query: 328 ETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 + +P +R+KA WAIRWI S DA + ERLVAFAAVEGIFFSGSF AIFWLKKRGLMPGLTF Sbjct: 200 DNIPFIRKKADWAIRWIQSEDALYAERLVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTF 259 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELI RDEG+H D+AC L+S L + + +E I +I +AV+ EKE+ DALPVSL+GM Sbjct: 260 SNELICRDEGIHTDYACLLFSYL--KNKPSSEIIEKIITEAVDIEKEYFSDALPVSLLGM 317 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANV 505 N LM Y+EFVADRLLV G + +N NPFD+ME ISL GKTNFFEKRV +YQKA V Sbjct: 318 NCDLMCQYVEFVADRLLVAFGNKKYYNVTNPFDFMENISLAGKTNFFEKRVSDYQKAGV 376
gb|EAA56437.1| hypothetical protein MG06408.4 [Magnaporthe grisea 70-15] ref|XP_369893.1| hypothetical protein MG06408.4 [Magnaporthe grisea 70-15] (403 aa) Score: 406 bits (1043), Expect: 8.82348e-112 Length: 313, Idn/Pos/Gap = 198/240/3 (63%/76%/0%) Query: 197 VPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYF 256 V KA E D L +++ YK+ ASFWTAEEIDL+ D+ W N+LT+ E+YF Sbjct: 63 VAPTIKAFEMDEPILQENPQRFVWQMYKKAEASFWTAEEIDLSKDLHDWNNKLTDDEKYF 122 Query: 257 VSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKD 316 +SH+LAFFAASDGIV ENL ERF +V+IPEARCFYGFQI MENIHSETYSLLID Y+K+ Sbjct: 123 ISHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKE 182 Query: 317 PEERTHLFRAMETMPCVRRKAYWAIRWIGSDAS-FQERLVAFAAVEGIFFSGSFCAIFWL 375 +RT+LF A++T+PC+R+KA WA+RWI S F RL+AFA VEGIFFSG+F +IFWL Sbjct: 183 TAQRTYLFNAIDTIPCIRKKADWALRWITDKKSTFATRLIAFAVVEGIFFSGAFASIFWL 242 Query: 376 KKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFV 435 KKRGLMPGLTFSNELISRDEGLH DFAC L+S+L R E + ++ DAV+ E+EF+ Sbjct: 243 KKRGLMPGLTFSNELISRDEGLHTDFACLLFSLL--NNRPNKEVVKEIVVDAVKIEQEFL 300 Query: 436 CDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEK 495 +ALP +L+GMN LM YIEFVADRLLV LG ++++ NPFD+ME ISL GKTNFFEK Sbjct: 301 TEALPCALLGMNANLMKQYIEFVADRLLVALGNEKVYRATNPFDFMENISLGGKTNFFEK 360 Query: 496 RVGEYQKANVTTS 508 RVGEYQKA V S Sbjct: 361 RVGEYQKAGVMAS 373
gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var. neoformans B-3501A] gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus neoformans var. neoformans JEC21] ref|XP_567858.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus neoformans var. neoformans JEC21] (401 aa) Score: 406 bits (1043), Expect: 9.59128e-112 Length: 325, Idn/Pos/Gap = 201/245/10 (61%/75%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ +I++ YK+ ASFWTAEEI+LA D+ W N+L + ERYF+ HVLAF Sbjct: 79 ETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNERYFIEHVLAF 138 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF +V+ EA+ FYGFQI MENIH+ETYSLLID Y+KD R L Sbjct: 139 FAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYIKDTARRNFL 198 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDAS-FQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++T+PC+R+KA WA+RWI S F ERL+AFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 199 FDAIDTIPCIRKKADWALRWISDKRSCFGERLIAFAAVEGIFFSGSFASIFWLKKRGLMP 258 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLH DFAC L++ L R + I +I++AV E+EF+ DALPVS Sbjct: 259 GLTFSNELISRDEGLHTDFACLLFTHL--RRRPHPDTIARIIKEAVTIEQEFLTDALPVS 316 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 LIGMN +LM YIEFVADRLLV +G +++WN+ NPFD+ME+ISLQGK NFFE RV Y K Sbjct: 317 LIGMNAKLMCQYIEFVADRLLVAMGNEKIWNSTNPFDFMEMISLQGKANFFESRVSAYSK 376 Query: 503 ANVTTS-------ATDNVFALDIEF 520 + V + A F+LD +F Sbjct: 377 SGVNQAVGAADHNAIKKGFSLDEDF 401
gb|AAN02587.1| ribonucleotide reductase small subunit [lumpy skin disease virus] gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [lumpy skin disease virus] ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [lumpy skin disease virus] (321 aa) Score: 405 bits (1040), Expect: 2.34211e-111 Length: 320, Idn/Pos/Gap = 198/250/8 (61%/78%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E + R+ +FPI + +I+ YK+ VASFWT +E+DL+ D+ W+ +L+ E+YF+ ++LAF Sbjct: 7 ETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWK-KLSNEEQYFIKNILAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENLAERF +V+ EARCFYGFQIAMENIHSE YSLLID Y+ +E+ HL Sbjct: 66 FAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKEKEHL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETM +++K+ WA +WI + ASF ERL+AFAAVEGIFFSGSF AIFWLKKRGLMP Sbjct: 126 FNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKRGLMP 185 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPA--ERIHSMIRDAVECEKEFVCDALP 440 GLTFSNELISRDEGLHCDFAC ++ L + P E I +I +AV EKEF+ + +P Sbjct: 186 GLTFSNELISRDEGLHCDFACLIFKHL----KYPPSNEIITIIINEAVSIEKEFLTNIIP 241 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEY 500 V LIGMN LMS YIEF+ADRLL+ELG D+++ + NPFD+ME ISL+GKTNFFEKRV EY Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301 Query: 501 QKANVTTSATDNVFALDIEF 520 QK V ++ DNVF+LD++F Sbjct: 302 QKMGVISNKDDNVFSLDVDF 321
ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus] gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus] (323 aa) Score: 404 bits (1037), Expect: 4.23531e-111 Length: 314, Idn/Pos/Gap = 190/237/2 (60%/75%/0%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 DR+ +FPI+H I+ YK+ VASFWT EE+DL+ D+ W+N L ER F+S++LAFFA Sbjct: 12 DRFVIFPIQHGDIWRMYKQAVASFWTVEEVDLSYDLIDWKN-LKPEERRFISYILAFFAV 70 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 SDGIV ENL E+F ++V+IPEARCFYGFQIA+ENIHSE YSLLID Y+ D E+ LF + Sbjct: 71 SDGIVNENLVEKFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIDTYIDDNNEKKRLFSS 130 Query: 327 METMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 M TM CVR+K+ WA++WI A + ERLVAFAAVEGIFFSGSF AIFWLKKRGLMPGLTF Sbjct: 131 MRTMDCVRKKSEWALKWINDSAPYGERLVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTF 190 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELISRDEGLHCDFAC L++ + +R++ +I AV E EF+ +AL + LIGM Sbjct: 191 SNELISRDEGLHCDFACLLFTNY-LSHKPSQDRVYEIIDSAVSVETEFLTEALSIDLIGM 249 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N + M YI+FV+DRLLV LG+ + +N NPF +ME ISL+GK NFFEKRV YQK V Sbjct: 250 NSKSMIEYIKFVSDRLLVSLGFSKKYNVENPFSFMENISLEGKANFFEKRVSNYQKMGVM 309 Query: 507 TSATDNVFALDIEF 520 ++ +N+F D EF Sbjct: 310 STKEENIFTTDAEF 323
gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii] (349 aa) Score: 404 bits (1037), Expect: 4.60385e-111 Length: 317, Idn/Pos/Gap = 188/249/3 (59%/78%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 +E++R+TL PI +P+++ FYK+ ASFWTAEEIDL++D+ + +L E++F+ HVLAF Sbjct: 36 KESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFE-KLNVNEKHFIKHVLAF 94 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIVLENLA +F+R+VEI EA+ FY FQIA+ENIHSETYSLLID Y+KD +ER +L Sbjct: 95 FAASDGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNL 154 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+E +P ++ KA WA +WI SF ER+VA A VEGI FSGSFCAIFW KK+ + G Sbjct: 155 FHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHG 214 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEGLH DF C +YS+L E ++P + +++++AVE E+ F+C++LP L Sbjct: 215 LTFSNELISRDEGLHTDFNCLIYSLL--ENKLPENVVQNIVKEAVEVERSFICESLPCDL 272 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN +LMS YIEFVADRLL LG +++++ NPF+WM+LISLQGKTNFFEKRV +YQK+ Sbjct: 273 IGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQKS 332 Query: 504 NVTTSATDNVFALDIEF 520 V + VF+L+ +F Sbjct: 333 GVMAQRKEQVFSLNTDF 349
pir||RDSS2R ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - Atlantic surf clam (fragment) (299 aa) Score: 402 bits (1034), Expect: 1.08732e-110 Length: 302, Idn/Pos/Gap = 200/239/8 (66%/79%/2%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 YK+ ASFW AEE+DL+ DM HW + L + E++F+SHVLAFFAASDGIV ENL ERF ++ Sbjct: 2 YKKAEASFW-AEEVDLSKDMAHWES-LKKEEKHFISHVLAFFAASDGIVNENLVERFSKE 59 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V + EARCFYGFQIAMENIHSE YSLLID Y+KDP+ER LF A+ETMPCV+ KA WA+R Sbjct: 60 VGVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADWAMR 119 Query: 343 WIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 WI D +S+ ER+VAFAAVEGIFFSGSF +IFWLKKRG+MPGLTFSNELISRDEGLHCDF Sbjct: 120 WINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKRGIMPGLTFSNELISRDEGLHCDF 179 Query: 402 ACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADR 461 AC ++S L + ERIH +I +AV+ E+ F+ +ALP LIGMN LM YIEFVADR Sbjct: 180 ACLMFSHLV--NKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMNCDLMRQYIEFVADR 237 Query: 462 LLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTT---SATDNVFALDI 518 LL+EL D+L+N NPFD+ME ISL+GKTNFFEKRVGEYQK V + + + F LD Sbjct: 238 LLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEYQKMGVMSGGNTGDSHAFTLDA 297 Query: 519 EF 520 +F Sbjct: 298 DF 299
emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium chabaudi] (349 aa) Score: 402 bits (1034), Expect: 1.16237e-110 Length: 317, Idn/Pos/Gap = 187/248/3 (58%/78%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 +E+ R+TL PI +P+++ FYK+ ASFWTAEEIDL++D+ + +L E++F+ HVLAF Sbjct: 36 KESSRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFE-KLNVNEKHFIKHVLAF 94 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIVLENLA +F+R+V+I EA+ FY FQIA+ENIHSETYSLLID Y++D +ER +L Sbjct: 95 FAASDGIVLENLASKFLREVQIIEAKKFYAFQIAVENIHSETYSLLIDNYIRDEKERLNL 154 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+E +P ++ KA WA +WI SF ER+VA A VEGI FSGSFCAIFW KK+ + G Sbjct: 155 FHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHG 214 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEGLH DF C +YS+L E ++P E + +++++AVE E+ F+C++LP L Sbjct: 215 LTFSNELISRDEGLHTDFNCLIYSLL--ENKLPEEVVQNIVKEAVEVERSFICESLPCDL 272 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IGMN +LMS YIEFVADRLL LG +++++ NPF WM+LISLQGKTNFFEKRV +YQK+ Sbjct: 273 IGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFSWMDLISLQGKTNFFEKRVADYQKS 332 Query: 504 NVTTSATDNVFALDIEF 520 V + VF+L+ +F Sbjct: 333 GVMAQRKEQVFSLNTDF 349
emb|CAG58476.1| unnamed protein product [Candida glabrata CBS138] ref|XP_445565.1| unnamed protein product [Candida glabrata] (400 aa) Score: 400 bits (1028), Expect: 4.56693e-110 Length: 322, Idn/Pos/Gap = 199/244/7 (61%/75%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 ++ DR TLFPIK+ +I++ YKR ASFWTAEEIDL+ D+ W NRL E ER+F+S VLAF Sbjct: 81 DDPDRLTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRLNENERFFISRVLAF 140 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL E F + IPEA+ FYGFQI +ENIHSETYSLLID Y+KDP+E L Sbjct: 141 FAASDGIVNENLVENFSTEAVIPEAKAFYGFQIMIENIHSETYSLLIDTYIKDPKESEFL 200 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ T+P + KA WA+RWI S+A F ERLVAFAA+EG+FFSGSF +IFWLKKRGLMP Sbjct: 201 FNAIHTIPEIGEKAEWALRWIANSEALFAERLVAFAAIEGVFFSGSFASIFWLKKRGLMP 260 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELI RDEGLH DFAC L++ L + E + ++ +AVE E+ + DALPV+ Sbjct: 261 GLTFSNELICRDEGLHTDFACLLFAHL--NHKPDPEVVERIVTEAVEIEQRYFLDALPVA 318 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN QLM+ Y+EFVADRLLV G +++N NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 319 LLGMNAQLMNQYVEFVADRLLVAFGNKKVYNVENPFDFMENISLAGKTNFFEKRVSDYQK 378 Query: 503 ANVTTSATDN----VFALDIEF 520 A V + A + F+LD +F Sbjct: 379 AGVMSKAQNTEGGGAFSLDEDF 400
gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521] ref|XP_403983.1| hypothetical protein UM06368.1 [Ustilago maydis 521] (424 aa) Score: 400 bits (1027), Expect: 5.91503e-110 Length: 324, Idn/Pos/Gap = 198/246/13 (61%/75%/4%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ LFPI+ +I++ YK+ ASFWTAEEIDL+ D+ W N+L + ER+F+SHVLAFFAAS Sbjct: 103 RFVLFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAAS 162 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF +V+ EARCFYGFQI MENIHSETYSLLID Y+++PE+R +LF A+ Sbjct: 163 DGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREYLFDAV 222 Query: 328 ETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ET+P V++KA WA+RWI A+F ERLVAFAAVEGIFFSGSF +IFWLKKRGLMPGLTF Sbjct: 223 ETIPVVKQKADWALRWISDKRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 282 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELISRDEGLH DFAC L+S L R + + +I +AVE EK F+C+++PV+LIGM Sbjct: 283 SNELISRDEGLHTDFACLLFSHL--RRRAHPDTVLKIITEAVEIEKAFLCESIPVALIGM 340 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N +LM YIE+VADRLLV LG + + PFD+M ISL+GKTNFFEK+V EY KA V Sbjct: 341 NSKLMCQYIEYVADRLLVSLGNPVHYGSTCPFDFMTNISLEGKTNFFEKKVAEYAKAGVA 400 Query: 507 ----------TSATDNVFALDIEF 520 T + + F+L+ +F Sbjct: 401 RKDANDSGDGTQKSTHTFSLEEDF 424
emb|CAE72892.1| Hypothetical protein CBG20205 [Caenorhabditis briggsae] (365 aa) Score: 398 bits (1023), Expect: 2.15587e-109 Length: 315, Idn/Pos/Gap = 197/245/4 (62%/77%/1%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +R+ +FP++H +I++FYK+ VASFWT EE+DL DM+ W ++ E+YF+S VLAFFAA Sbjct: 54 NRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWE-KMNGDEQYFISRVLAFFAA 112 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 SDGIV ENL ERF +V++ EAR FYGFQIA+ENIHSE YS LI+ Y++D +ER LF A Sbjct: 113 SDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEKERMKLFNA 172 Query: 327 METMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 + +++KA WA+RWI + ASF ERL+AFAAVEGIFFSGSF +IFWLKKRGLMPGLT Sbjct: 173 IFEFEFIKKKADWALRWISDTKASFAERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLT 232 Query: 386 FSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIG 445 SNELISRDEGLH DFAC LYSML + ++ ERI +IRDAV E+EF+ +ALPV +IG Sbjct: 233 HSNELISRDEGLHRDFACLLYSML--QNKLSQERIFEIIRDAVAIEQEFLTEALPVDMIG 290 Query: 446 MNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANV 505 MN +LMS YIEFVAD LL ELG D+L+N NPFD+ME IS+ GKTNFFEKRV EYQ+ V Sbjct: 291 MNCRLMSQYIEFVADHLLQELGCDKLYNVKNPFDFMENISIDGKTNFFEKRVSEYQRPGV 350 Query: 506 TTSATDNVFALDIEF 520 S T+ F L+ +F Sbjct: 351 MVSETERQFDLEADF 365
gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar nucleopolyhedrovirus] pir||T30470 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - Lymantria dispar nuclear polyhedrosis virus ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar nucleopolyhedrovirus] (348 aa) Score: 398 bits (1022), Expect: 2.32399e-109 Length: 318, Idn/Pos/Gap = 199/244/5 (62%/76%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++P ++ YK+ ASFWT EE+DL+ D W RL + ER+F+ HVLAF Sbjct: 35 ENPRRFVIFPIQYPDMWRMYKKAEASFWTVEEVDLSKDTSDWE-RLNDNERHFIKHVLAF 93 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMEN+HSE YS LID YV+ EE+ L Sbjct: 94 FAASDGIVNENLVERFAQEVQVAEARCFYGFQIAMENVHSEMYSTLIDTYVRSSEEKLRL 153 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 A+ETMPCV+ KA WA+RWI G +A+F ERLVAFAAVEG+FFSGSF AIFWLKKRGLMP Sbjct: 154 LNAIETMPCVKEKAEWALRWIAGREAAFGERLVAFAAVEGVFFSGSFAAIFWLKKRGLMP 213 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELISRDEGLHCDFAC L+ L +R A R+ ++ DAV E+ F+ +ALPV Sbjct: 214 GLTFSNELISRDEGLHCDFACLLFKHLV--QRPSAARVREIVTDAVAIEQRFLTEALPVR 271 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+G+N + MS YIEFVADRLL+EL + +NTPNP D+M LISL+GKTNFFEK+VGEYQK Sbjct: 272 LLGLNCETMSQYIEFVADRLLLELVGAKHYNTPNPLDFMNLISLEGKTNFFEKKVGEYQK 331 Query: 503 ANVTTSATDNVFALDIEF 520 V + + F LD +F Sbjct: 332 FGVMFAKHEE-FTLDADF 348
emb|CAA20100.1| suc22 [Schizosaccharomyces pombe] sp|P36603|RIR2_SCHPO Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase small subunit) ref|NP_596546.1| ribonucleoside-diphosphate reductase small chain [Schizosaccharomyces pombe] (391 aa) Score: 396 bits (1018), Expect: 7.22853e-109 Length: 319, Idn/Pos/Gap = 195/244/8 (61%/76%/2%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ LFPIK+ +I++FYK+ ASFWTAEEIDL+ D+ W N+L ERYF+S VLA+FAAS Sbjct: 75 RFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFISTVLAYFAAS 134 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF +V+IPEARC YGFQI +ENIHSETYSLL+D Y+++P+E+ F A+ Sbjct: 135 DGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREPKEKQRHFDAI 194 Query: 328 ETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 TM ++ KA WA+RWI D+++ RLVAFAAVEGIFFSGSF +IFWLKKRGLMPGLTF Sbjct: 195 LTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 254 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELI RDEGLH DFAC ++S L + R + + ++I +AV+ EKE+ DALPVSL+GM Sbjct: 255 SNELICRDEGLHTDFACLMFSHL--KHRPGRKVVEAIIVEAVDIEKEYFTDALPVSLLGM 312 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N+ LM YIEFVADRLLV LG D+ +N NPFD+ME ISL GKTNFFEK+V +YQ A V Sbjct: 313 NKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVSDYQIAGVM 372 Query: 507 TSAT-----DNVFALDIEF 520 + D+ F +D +F Sbjct: 373 SGTKRAEKDDHTFTIDEDF 391
gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens] (285 aa) Score: 396 bits (1017), Expect: 8.47031e-109 Length: 291, Idn/Pos/Gap = 192/233/10 (65%/80%/3%) Query: 234 EEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYG 293 EE+DL+ D+ HW N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V++PEARCFYG Sbjct: 1 EEVDLSKDLPHW-NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYG 59 Query: 294 FQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQE 352 FQI +EN+HSE YSLLID Y++DP++R LF A+ETMP V++KA WA+RWI ++F E Sbjct: 60 FQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGE 119 Query: 353 RLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML--- 409 R+VAFAAVEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L Sbjct: 120 RVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNK 179 Query: 410 PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYD 469 P+EERV +I DAV+ E+EF+ +ALPV LIGMN LM YIEFVADRLLVELG+ Sbjct: 180 PSEERV-----REIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFS 234 Query: 470 RLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 +++ NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 235 KVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 285
emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis] (352 aa) Score: 395 bits (1016), Expect: 1.42091e-108 Length: 344, Idn/Pos/Gap = 195/253/28 (56%/73%/8%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++P I++ YK+ ASFWT EE+DL+ D+ HW + L E++F+SHVLAF Sbjct: 10 ENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHW-DSLKPEEKHFISHVLAF 68 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL +RF ++V++PEAR FY +Q+ +E++HSE YSLLI+ Y++D +ER HL Sbjct: 69 FAASDGIVNENLVQRFCQEVQVPEARSFYSYQVLIESVHSEMYSLLINTYIRDLKEREHL 128 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ TMPCV+RKA WA++WI S ++F ERLVAFAAVEGIFFSGSF +I+WLKKRGLMP Sbjct: 129 FNAIYTMPCVKRKADWALQWINDSTSTFGERLVAFAAVEGIFFSGSFASIYWLKKRGLMP 188 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEER--------VPAERI----------- 420 GLT+SNELISRDEGLHC FAC LYS L P+E+R V E++ Sbjct: 189 GLTYSNELISRDEGLHCTFACLLYSYLVKKPSEDRVKDIITKAVSIEQVGGSYRSMDGNK 248 Query: 421 ---HSMIRDAV-ECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPN 476 +I+DA C +EF+ +ALPV LIGMN+ LM YIEFVADRL +LG +++N N Sbjct: 249 PNREVLIKDATCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMYNAEN 308 Query: 477 PFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 PFD+ME ISL+GKTNFFEKRV EYQ+ + +S D+ F LD +F Sbjct: 309 PFDFMEAISLEGKTNFFEKRVAEYQRFGIMSSPVDSEFTLDADF 352
emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe] prf||1913428B ribonucleotide reductase:SUBUNIT=small (391 aa) Score: 395 bits (1015), Expect: 1.46913e-108 Length: 319, Idn/Pos/Gap = 195/243/8 (61%/76%/2%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ LFPIK+ +I++FYK+ ASFWTAEEIDL+ D+ W N+L ERYF+S VLA+FAAS Sbjct: 75 RFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFISTVLAYFAAS 134 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV ENL ERF +V+IPEARC YGFQI +ENIHSETYSLL+D Y+++P+E+ F A+ Sbjct: 135 DGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREPKEKQRHFDAI 194 Query: 328 ETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 TM ++ KA WA+RWI D+++ RLVAFAAVEGIFFSGSF +IFWLKKRGLMPGLTF Sbjct: 195 LTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 254 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 446 SNELI RDEGLH DFAC ++S L + R + + +I +AV+ EKE+ DALPVSL+GM Sbjct: 255 SNELICRDEGLHTDFACLMFSHL--KHRPGRKLLKPIIVEAVDIEKEYFTDALPVSLLGM 312 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 N+ LM YIEFVADRLLV LG D+ +N NPFD+ME ISL GKTNFFEK+V +YQ A V Sbjct: 313 NKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVSDYQIAGVM 372 Query: 507 TSAT-----DNVFALDIEF 520 + D+ F +D +F Sbjct: 373 SGTKRAEKDDHTFTIDEDF 391
gb|AAN04367.1| Rr2 [Heliothis zea virus 1] ref|NP_690492.1| ribonucleotide reductase [Heliothis zea virus 1] (333 aa) Score: 395 bits (1015), Expect: 1.75048e-108 Length: 319, Idn/Pos/Gap = 189/242/2 (59%/75%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E + R+TLFPI++ I+E YK+ ASFWT EE+DL+ D+ W RLTE ER F+SH+LAF Sbjct: 15 EPSSRFTLFPIRYHDIWEMYKKAQASFWTVEEVDLSKDLYDWETRLTETEREFISHILAF 74 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FA SDGIV +NL RF +++ IPE CFYGFQI +EN+HSE YS LID Y++DP+ + L Sbjct: 75 FAGSDGIVNDNLLTRFSQELTIPEVSCFYGFQIMIENVHSEMYSTLIDMYIRDPQRKHML 134 Query: 324 FRAMETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A++T+P +R+KA W IRWI D +S+ +RLVAFAAVEGIFFSGSF AIFWLKKRGLMP Sbjct: 135 FNAIDTVPSIRKKAQWVIRWIDDDKSSYADRLVAFAAVEGIFFSGSFAAIFWLKKRGLMP 194 Query: 383 GLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 GLT SNE ISRDEGLHCDFA L+ + L E R E++ +++ DAV E+EF+ ++LPV Sbjct: 195 GLTHSNEFISRDEGLHCDFAILLFRNYLRPECRSSDEKVINIVTDAVRIEQEFLTESLPV 254 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 S+IGMN +LM YIEFVADRLL EL +++N NPFD+M ISL+GKTNFFEK+V EY+ Sbjct: 255 SMIGMNCKLMCEYIEFVADRLLYELIGRKIYNAKNPFDFMTSISLEGKTNFFEKKVSEYK 314 Query: 502 KANVTTSATDNVFALDIEF 520 + V + DNVF + +F Sbjct: 315 RYGVGVNLEDNVFKISEDF 333
emb|CAA84688.1| Hypothetical protein C03C10.3 [Caenorhabditis elegans] sp|P42170|RIR2_CAEEL Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) ref|NP_497821.1| ribonucleotide reductase (44.3 kD) (rnr-2) [Caenorhabditis elegans] (381 aa) Score: 395 bits (1014), Expect: 2.13857e-108 Length: 315, Idn/Pos/Gap = 192/243/4 (60%/77%/1%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +R+ +FP+KH I+ FYK+ VASFWT EE+DL DM+ W ++ E+YF+S +LAFFAA Sbjct: 70 NRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWE-KMNGDEQYFISRILAFFAA 128 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 SDGIV ENL ERF +V++ EAR FYGFQIA+ENIHSE YS LI+ Y++D ER LF A Sbjct: 129 SDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDETERNTLFNA 188 Query: 327 METMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 ++ +++KA WA+RWI ASF ERL+AFAAVEGIFFSGSF +IFWLKKRGLMPGLT Sbjct: 189 VDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLT 248 Query: 386 FSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIG 445 SNELISRDEGLH DFAC LYS L ++++ +RI+ +I+DAV E+EF+ +ALPV +IG Sbjct: 249 HSNELISRDEGLHRDFACLLYSKL--QKKLTQQRIYDIIKDAVAIEQEFLTEALPVDMIG 306 Query: 446 MNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANV 505 MN +LMS YIEFVAD LLVELG D+L+ + NPFD+ME IS+ GKTNFFEKRV EYQ+ V Sbjct: 307 MNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFMENISIDGKTNFFEKRVSEYQRPGV 366 Query: 506 TTSATDNVFALDIEF 520 + + F L+ +F Sbjct: 367 MVNEAERQFDLEADF 381
ref|XP_528204.1| PREDICTED: similar to p53-inducible ribonucleotide reductase small subunit 2 long form [Pan troglodytes] dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form [Homo sapiens] (299 aa) Score: 394 bits (1013), Expect: 2.48513e-108 Length: 301, Idn/Pos/Gap = 193/237/10 (64%/78%/3%) Query: 224 KRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDV 283 +R A+ +E+DL+ D+ HW N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V Sbjct: 5 ERPEAAGLDQDEVDLSKDLPHW-NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEV 63 Query: 284 EIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRW 343 ++PEARCFYGFQI +EN+HSE YSLLID Y++DP++R LF A+ETMP V++KA WA+RW Sbjct: 64 QVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 123 Query: 344 IGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 I ++F ER+VAFAAVEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFA Sbjct: 124 IADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 183 Query: 403 CHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVA 459 C ++ L P+EERV +I DAV+ E+EF+ +ALPV LIGMN LM YIEFVA Sbjct: 184 CLMFQYLVNKPSEERV-----REIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVA 238 Query: 460 DRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIE 519 DRLLVELG+ +++ NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD + Sbjct: 239 DRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDAD 298 Query: 520 F 520 F Sbjct: 299 F 299
ref|XP_584910.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain (Ribonucleotide reductase small chain) [Bos taurus] (390 aa) Score: 389 bits (998), Expect: 1.5979e-106 Length: 322, Idn/Pos/Gap = 198/243/11 (61%/75%/3%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ I++ YK+ ASFWTAEE+DL+ D+ HW L ERYF+SHVLAF Sbjct: 75 ENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE-ALKSEERYFISHVLAF 133 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V+I EARCFYGFQIAMENIHSE YSLLID Y+KD +ER L Sbjct: 134 FAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFL 193 Query: 324 FRAMETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ETMPCV++KA WA+RWIG A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMP Sbjct: 194 FNAIETMPCVKKKADWALRWIGDKAATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMP 253 Query: 383 GLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDAL 439 GLTFSNELISRDEGLHCDFAC ++ L P+E+RV +I +AV E+ V Sbjct: 254 GLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRV-----KEIIVNAVRIEQVGVPHGG 308 Query: 440 PVSLIGMNQ-QLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVG 498 P ++ YIEFVADRL++ELG+ +++ NPFD+ME ISL+GKTNFFEKRVG Sbjct: 309 PACEAHWDELHFDEQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVG 368 Query: 499 EYQKANVTTSATDNVFALDIEF 520 EYQ+ V +S T+N F LD +F Sbjct: 369 EYQRMGVMSSPTENSFTLDADF 390
pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer (419 aa) Score: 388 bits (997), Expect: 1.93594e-106 Length: 308, Idn/Pos/Gap = 189/236/3 (61%/76%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E+ +R LFPIK+ +I++ YKR ASFWTAEEIDL+ D+ W NR+ E ER+F+S VLAF Sbjct: 101 EDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFISRVLAF 160 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL E F +V+IPEA+ FYGFQI +ENIHSETYSLLID Y+KDP+E L Sbjct: 161 FAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFL 220 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ T+P + KA WA+RWI +DA F ERLVAFA++EG+FFSGSF +IFWLKKRG+MP Sbjct: 221 FNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMP 280 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELI RDEGLH DFAC L++ L + + + ++ +AVE E+ + DALPV+ Sbjct: 281 GLTFSNELICRDEGLHTDFACLLFAHL--KNKPDPAIVEKIVTEAVEIEQRYFLDALPVA 338 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LM+ Y+EFVADRLLV G + + NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 339 LLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQK 398 Query: 503 ANVTTSAT 510 A V + +T Sbjct: 399 AGVMSKST 406
gb|AAF91416.1| ribonucleotide reductase R2 subunit [Cryptosporidium parvum] gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene [Cryptosporidium parvum] (352 aa) Score: 388 bits (996), Expect: 2.30669e-106 Length: 302, Idn/Pos/Gap = 183/231/3 (60%/76%/0%) Query: 219 IFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAER 278 I+ YK+ ASFW EEIDL+ D W + L + ER+F+ +VLAFFAASDGIV+ENLA Sbjct: 54 IWSMYKKAEASFWVTEEIDLSQDTRDWES-LKDPERHFIKYVLAFFAASDGIVMENLAVN 112 Query: 279 FMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAY 338 F+R+++IPEAR +Y FQ+++E IHSETYSLLID Y+ + +ER LF A+ + V++KA Sbjct: 113 FLREIQIPEARMYYAFQMSIEQIHSETYSLLIDRYITEIKERQMLFEAISHIEAVKKKAE 172 Query: 339 WAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH 398 WA +W+ S+ SF ER++ F AVEGI FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH Sbjct: 173 WATKWMNSERSFAERIIGFCAVEGILFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH 232 Query: 399 CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFV 458 DFAC +Y L + ++PA R+ +I +AVE E+ F+CD+LPV LIGMN +LM+ YIEFV Sbjct: 233 ADFACLIYKAL--KFKLPAPRVQQIISEAVEVERNFLCDSLPVDLIGMNSRLMAQYIEFV 290 Query: 459 ADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDI 518 ADRLL L +++N NPFDWM+LISLQGKTNFFEKRVGEYQ A V + D F L+ Sbjct: 291 ADRLLFALDIPKIYNVSNPFDWMDLISLQGKTNFFEKRVGEYQMAGVMVNQDDQKFDLNA 350 Query: 519 EF 520 +F Sbjct: 351 DF 352
gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var. neoformans B-3501A] gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus neoformans var. neoformans JEC21] ref|XP_567827.1| ribonucleotide reductase small subunit, putative [Cryptococcus neoformans var. neoformans JEC21] (430 aa) Score: 388 bits (996), Expect: 2.44542e-106 Length: 307, Idn/Pos/Gap = 182/234/2 (59%/76%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ LFPIK+ +I++ YK ASFWTAEE+D D+ W +R+TE ER+F+ +LAF Sbjct: 105 ESESRFVLFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQERFFILRILAF 164 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV EN+ +F +V+I EAR FY FQ +E +HSETYSLLI+ YV+D +E+ L Sbjct: 165 FAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEKDFL 224 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 FR M +PC+++KA WA+++I + F+ RLVAFA VEGIFFSGSF AIFWLKKRGLMPG Sbjct: 225 FRGMTNIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPG 284 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LTFSNELISRDEG+H DFAC LY+ L + R + +H ++ +A+ EK+F+ DALP +L Sbjct: 285 LTFSNELISRDEGMHTDFACLLYNHL--KHRCSTDEVHHIVSEALVIEKQFLTDALPCAL 342 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKA 503 IG+N LM Y+EFVADRL+V+LGY +++N NPFDWMELISLQGK NFFE RV YQKA Sbjct: 343 IGINAHLMCQYMEFVADRLVVDLGYPKIYNATNPFDWMELISLQGKANFFESRVSAYQKA 402 Query: 504 NVTTSAT 510 NV+ + T Sbjct: 403 NVSRTGT 409
emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae] sp|P09938|RIR2_YEAST Ribonucleoside-diphosphate reductase small chain 1 (Ribonucleotide reductase small subunit) pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer From Saccharomyces Cerevisiae ref|NP_012508.1| Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits [Saccharomyces cerevisiae] gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit (399 aa) Score: 388 bits (996), Expect: 2.44542e-106 Length: 308, Idn/Pos/Gap = 189/236/3 (61%/76%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E+ +R LFPIK+ +I++ YKR ASFWTAEEIDL+ D+ W NR+ E ER+F+S VLAF Sbjct: 81 EDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFISRVLAF 140 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL E F +V+IPEA+ FYGFQI +ENIHSETYSLLID Y+KDP+E L Sbjct: 141 FAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFL 200 Query: 324 FRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F A+ T+P + KA WA+RWI +DA F ERLVAFA++EG+FFSGSF +IFWLKKRG+MP Sbjct: 201 FNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMP 260 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GLTFSNELI RDEGLH DFAC L++ L + + + ++ +AVE E+ + DALPV+ Sbjct: 261 GLTFSNELICRDEGLHTDFACLLFAHL--KNKPDPAIVEKIVTEAVEIEQRYFLDALPVA 318 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN LM+ Y+EFVADRLLV G + + NPFD+ME ISL GKTNFFEKRV +YQK Sbjct: 319 LLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQK 378 Query: 503 ANVTTSAT 510 A V + +T Sbjct: 379 AGVMSKST 386
gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis] (296 aa) Score: 386 bits (992), Expect: 7.60624e-106 Length: 298, Idn/Pos/Gap = 183/229/3 (61%/76%/1%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 YK+ ASFW EEIDL+ D W + L + ER+F+ +VLAFFAASDGIV+ENLA F+R+ Sbjct: 2 YKKAEASFWVTEEIDLSQDTRDWES-LKDPERHFIKYVLAFFAASDGIVMENLAVNFLRE 60 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 ++IPEAR +Y FQ+++E IHSETYSLLID Y+ D +ER LF A+ + V++KA WA + Sbjct: 61 IQIPEARMYYAFQMSIEQIHSETYSLLIDRYITDIKERQMLFEAISHIEAVKKKAEWATK 120 Query: 343 WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 W+ S+ SF ER++ F AVEGI FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH DFA Sbjct: 121 WMNSERSFAERIIGFCAVEGILFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHADFA 180 Query: 403 CHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRL 462 C +Y L + ++PA R+ +I +AVE E+ F+CD+LPV LIGMN +LM+ YIEFVADRL Sbjct: 181 CLIYKAL--KFKLPAPRVQQIISEAVEVERNFLCDSLPVDLIGMNSRLMAQYIEFVADRL 238 Query: 463 LVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 L L +++N NPFDWM+LISLQGKTNFFEKRVGEYQ A V + D F L+ +F Sbjct: 239 LFALDIPKIYNVSNPFDWMDLISLQGKTNFFEKRVGEYQMAGVMVNQDDQKFDLNADF 296
emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon cuniculi GB-M1] ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon cuniculi GB-M1] sp|Q8SRR2|RIR2_ENCCU Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase small subunit) (325 aa) Score: 377 bits (968), Expect: 4.53818e-103 Length: 315, Idn/Pos/Gap = 186/236/6 (59%/74%/1%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +R+ L PIK+ I++ YK+ +SFWT EE+ L D+D W +L ER+F+S+VLAFFAA Sbjct: 16 ERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDW-GKLNAKERHFISYVLAFFAA 74 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 SDGIV NL ERF +V++ EAR FYGFQ+A+ENIHSE YSLLID Y++D +E+ LF A Sbjct: 75 SDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDEKNFLFDA 134 Query: 327 METMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 + T+P V+ KA WAIRWI ++ F RLVAFA VEGIFFSG+F +IFWLKKRGLMPGLT Sbjct: 135 IRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKRGLMPGLT 194 Query: 386 FSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIG 445 FSNELISRDEGLHC+FAC L+ L + RI ++ DAVE EK+F+ ++LPV+LIG Sbjct: 195 FSNELISRDEGLHCEFACLLHYHLKKK----CNRIKEVVMDAVEIEKKFLSESLPVNLIG 250 Query: 446 MNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANV 505 MN LM YIEFVADRLL LG +R++N NPFD+ME ISL GKTNFF+KR +YQKA V Sbjct: 251 MNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRESQYQKAFV 310 Query: 506 TTSATDNVFALDIEF 520 ++ F +D++F Sbjct: 311 GIENGNDSFRIDVDF 325
gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) (399 aa) Score: 375 bits (963), Expect: 1.54724e-102 Length: 311, Idn/Pos/Gap = 187/235/9 (60%/75%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAE---EIDLAADMDHWRNRLTEAERYFVSHV 260 E+ +R LFPIK+ +I++ Y+ ASFWTAE EIDL+ D+ W NR+ E ER+F+S V Sbjct: 81 EDKERTVLFPIKYHEIWQAYE---ASFWTAETAEEIDLSKDIHDWNNRMNENERFFISRV 137 Query: 261 LAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEER 320 LAFFAASDGIV ENL E F +V+IPEA+ FYGFQI +ENIHSETYSLLID Y+KDP+E Sbjct: 138 LAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKES 197 Query: 321 THLFRAMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRG 379 LF A+ T+P + KA WA+RWI +DA F ERLVAFA++EG+FFSGSF +IFWLKKRG Sbjct: 198 EFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLKKRG 257 Query: 380 LMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDAL 439 +MPGLTFSNELI RDEGLH DFAC L++ L + + + ++ +AVE E+ + DAL Sbjct: 258 MMPGLTFSNELICRDEGLHTDFACLLFAHL--KNKPDPAIVEKIVTEAVEIEQRYFLDAL 315 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGE 499 PV+L+GMN LM+ Y+EFVADRLLV G + + NPFD+ME ISL GKTNFFEKRV + Sbjct: 316 PVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSD 375 Query: 500 YQKANVTTSAT 510 YQKA V + +T Sbjct: 376 YQKAGVMSKST 386
ref|NP_048832.1| contains ribonucleotide reductase (RR) signature; similar to tobacco RR small subunit, corresponds to Swiss-Prot Accession Number P49730 [Paramecium bursaria Chlorella virus 1] gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to tobacco RR small subunit, corresponds to Swiss-Prot Accession Number P49730 [Paramecium bursaria Chlorella virus 1] pir||T17978 probable ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - Chlorella virus PBCV-1 (324 aa) Score: 372 bits (956), Expect: 1.01129e-101 Length: 313, Idn/Pos/Gap = 174/229/3 (55%/73%/0%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 +++ FPI++P +++ YK+ VA+FWT EE+ L AD+ WR +L + ER+F+ H+L FFA S Sbjct: 15 KFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHFIKHILGFFAGS 74 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 DGIV+ENL F +V +PEAR FY +Q E+IHSE Y+LLIDA + D +ER LF A+ Sbjct: 75 DGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISDEQERNELFDAI 134 Query: 328 ETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFS 387 E +P V KA WA +W+ SF ERLVA+ VEGI FSGSFCAIFWL+ +G+MPGL S Sbjct: 135 ENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLRNKGVMPGLGLS 194 Query: 388 NELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMN 447 NE ISRDEGLH F +YS L + ++P E + +I +AVE EKEF+CDA+P LIGMN Sbjct: 195 NEFISRDEGLHQQFGELMYSKL--QNKLPFETVKQIITEAVENEKEFICDAIPCRLIGMN 252 Query: 448 QQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTT 507 +LM YIEFVADR+ V LGY++++N+ NPF +MELISLQGKTNFFEKRV +YQ+ V Sbjct: 253 AELMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVSDYQRPGV-M 311 Query: 508 SATDNVFALDIEF 520 DN+FA+D +F Sbjct: 312 KPEDNIFAIDDDF 324
emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis] (407 aa) Score: 370 bits (950), Expect: 6.33985e-101 Length: 287, Idn/Pos/Gap = 183/223/17 (63%/77%/5%) Query: 235 EIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGF 294 ++DL+ D+ HW + L + ER+F+SHVLAFFAASDGIV ENL ERF ++V++ EARCFYGF Sbjct: 137 QVDLSKDLQHWES-LKDDERFFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGF 195 Query: 295 QIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSD-ASFQER 353 QIAMENIHSE YSLLID Y+K+P ER +LF A+ET+PCV++KA WA+ WIG+ AS+ ER Sbjct: 196 QIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKKKADWALNWIGNQKASYGER 255 Query: 354 LVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE 413 +VAFAAVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L Sbjct: 256 VVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHL--LH 313 Query: 414 RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN 473 + A+ + ++IR+AVE E+EF+ +ALPV LIGMN QLM YIEF+ + Sbjct: 314 KPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMNCQLMKRYIEFI-------------YR 360 Query: 474 TPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 NPFD+ME ISL+GKTNFFEKRVGEYQ+ V A DN F LD +F Sbjct: 361 AENPFDFMENISLEGKTNFFEKRVGEYQRMGVMAGAADNTFRLDADF 407
gb|AAC37857.1| ribonucleotide reductase sp|P32209|RIR2_SWPVK Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (274 aa) Score: 365 bits (937), Expect: 1.84515e-99 Length: 269, Idn/Pos/Gap = 177/212/7 (65%/78%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPIK+ I++ YK+ VASFWT EE+DL+ D+D W ++LT+ E+YF+ H+LAF Sbjct: 7 ESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDW-DKLTKDEKYFIKHILAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FA+SDGIV ENLAERF DV+ EARCFYGFQIAMENIHSE YSLLID YV+D E+ HL Sbjct: 66 FASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIEKMHL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A+ETM CV++KA WA +WI S+ + ER+VAFAAVEGIFFSGSF AIFW+KKRGLMPG Sbjct: 126 FNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRGLMPG 185 Query: 384 LTFSNELISRDEGLHCDFACHLYSML--PAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 LTFSNELISRDEGLHCDFAC ++ L P + V I S+I DAV EKEF+ A+PV Sbjct: 186 LTFSNELISRDEGLHCDFACLMFKHLLHPPSKEV----ITSIIIDAVNIEKEFLTVAIPV 241 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 LIGMN LMS YIEFVADRLL ELG ++ Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEK 270
ref|XP_235367.3| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53 inducible) [Rattus norvegicus] (367 aa) Score: 352 bits (902), Expect: 2.29483e-95 Length: 338, Idn/Pos/Gap = 184/231/50 (54%/68%/14%) Query: 187 ERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR 246 E + VRS+ + + + + R+ +FPI++P I++ YK+ ASFWTAEE+ Sbjct: 76 ETKENEVRSNEEPLLR-KSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEV---------- 124 Query: 247 NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETY 306 ERF ++V++PEARCFYGFQI +EN+HSE Y Sbjct: 125 ------------------------------ERFSQEVQVPEARCFYGFQILIENVHSEMY 154 Query: 307 SLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFF 365 SLLID Y++DP++R LF A+ETMP V++KA WA+RWI ++F ER+VAFAAVEGIFF Sbjct: 155 SLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFF 214 Query: 366 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHS 422 SGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ L P+EERV Sbjct: 215 SGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERV-----ME 269 Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWME 482 +I DAV+ E+EF+ +ALPV LIGMN LM YIEFVADRLL ELG+ +++ NPFD+ME Sbjct: 270 IIVDAVKIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFME 329 Query: 483 LISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 330 NISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 367
gb|AAL98748.1| putative ribonucleotide reductase small subunit [infectious spleen and kidney necrosis virus] ref|NP_612246.1| putative ribonucleotide reductase small subunit [infectious spleen and kidney necrosis virus] (312 aa) Score: 339 bits (869), Expect: 1.33572e-91 Length: 306, Idn/Pos/Gap = 171/217/6 (55%/70%/1%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 D+Y L P P ++ YK+ VASFWT EE+DL+ D+ HW +LTEAER F+SH+LAFFA Sbjct: 2 DKYVLRP-SDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTEKLTEAERRFMSHILAFFAM 60 Query: 267 SDGIVLENLAERFMRDVE-IPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFR 325 +DGIV +NL F ++++ IPEAR FYGFQ+AMENIH+E Y+ LI V E + LF Sbjct: 61 ADGIVGDNLVCNFAKELDYIPEARAFYGFQVAMENIHAEMYTQLIITLVAK-ENQAALFS 119 Query: 326 AMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 A E MPCV+ KA WA +W+ + S RL+AFAAVEG+ FSGSF AIFWLKKR LMPGL Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKSIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 FSNELISRDEGLHCDFAC L+ + + + H +I DAV+ E F +AL L+ Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMA--NKPCQDDAHQIISDAVDIETAFFQEALKTPLL 237 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKAN 504 GMN M YI+FVADRLL LGY +++N NPFD+M+ IS++GKTNFFE+RV EYQ+ Sbjct: 238 GMNSDSMRLYIQFVADRLLDALGYAKMYNVANPFDFMDNISIEGKTNFFERRVSEYQRMG 297 Query: 505 VTTSAT 510 V T ++ Sbjct: 298 VFTPSS 303
dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus] sp|Q9QTF2|RIR2_RSIV Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (312 aa) Score: 338 bits (867), Expect: 2.13128e-91 Length: 316, Idn/Pos/Gap = 173/222/7 (54%/70%/2%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 DRY L P P ++ YK+ VASFWT EE+DL+ D+ HW ++LTEAER F+SH+LAFFA Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60 Query: 267 SDGIVLENLAERFMRDVE-IPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFR 325 +DGIV +NL F ++++ IPEAR FYGFQ+A+ENIH+E Y+ LI V E + LF Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAK-ENQAALFS 119 Query: 326 AMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 A E MPCV+ KA WA +W+ + RL+AFAAVEG+ FSGSF AIFWLKKR LMPGL Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 FSNELISRDEGLHCDFAC L+ + + + H +I DAV+ E F +AL L+ Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMA--NKPCQDDAHQIISDAVDIETAFFREALKTPLL 237 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKAN 504 GMN M YI+FVADRLL LGY +++N NPFD+M+ IS++GKTNFFE+RV EYQ+ Sbjct: 238 GMNSDSMKLYIQFVADRLLDALGYAKMYNVSNPFDFMDNISIEGKTNFFERRVSEYQRMG 297 Query: 505 VTTSATDNVFALDIEF 520 V T ++ F ++ EF Sbjct: 298 VFTPSSME-FTMNEEF 312
ref|YP_164546.1| ribonucleotide reductase small chain [Rock bream iridovirus] gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus] (312 aa) Score: 338 bits (867), Expect: 2.6038e-91 Length: 316, Idn/Pos/Gap = 173/222/7 (54%/70%/2%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 DRY L P P ++ YK+ VASFWT EE+DL+ D+ HW ++LTEAER F+SH+LAFFA Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60 Query: 267 SDGIVLENLAERFMRDVE-IPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFR 325 +DGIV +NL F ++++ IPEAR FYGFQ+AM+NIH+E Y+ LI V E + LF Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAMKNIHAEMYTQLIITLVAK-ENQAALFS 119 Query: 326 AMETMPCVRRKAYWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 A E MPCV+ KA WA +W+ + RL+AFAAVEG+ FSGSF AIFWLKKR LMPGL Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 FSNELISRDEGLHCDFAC L+ + + + H +I DAV+ E F +AL L+ Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMA--NKPCQDDAHEIISDAVDIETAFFREALKTPLL 237 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKAN 504 GMN M YI+FVADRLL LGY +++N NPFD+M+ IS++GKTNFFE+RV EYQ+ Sbjct: 238 GMNSDSMKLYIQFVADRLLDALGYAKMYNVGNPFDFMDNISIEGKTNFFERRVSEYQRMG 297 Query: 505 VTTSATDNVFALDIEF 520 V T ++ F ++ EF Sbjct: 298 VFTPSSME-FTMNEEF 312
gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata nucleopolyhedrovirus A] gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata nucleopolyhedrovirus] ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata nucleopolyhedrovirus A] (313 aa) Score: 328 bits (841), Expect: 2.60607e-88 Length: 297, Idn/Pos/Gap = 159/211/2 (53%/71%/0%) Query: 206 ADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFA 265 A R TL+PI H ++E YKR A FW EE+DL+ D D ++ +L +R+F+ HVL FF+ Sbjct: 3 AVRKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFS 62 Query: 266 ASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFR 325 A+D IV N+ ++ V EA FY FQ AMEN+H++ Y LI + D + + + Sbjct: 63 AADSIVNINVLNYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIIELIPDKKHQDLILN 122 Query: 326 AMETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 A + +PCVR+K WA++WI +D A+F ERLVAFA VEG+FFSGSF AIF++K G+MPGL Sbjct: 123 AFDNVPCVRKKDDWALKWIENDKATFAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGL 182 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 TFSNELISRDEG+H DFAC LY +E++ E+I M ++AV+ EKEF DALPVSL+ Sbjct: 183 TFSNELISRDEGMHTDFAC-LYYNTRVKEKLSYEKILDMFKEAVDIEKEFFTDALPVSLL 241 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 GMN +M YIEFVADRLL++LG + +N NPF +M ISL+GKTNFFE+RVGEY+ Sbjct: 242 GMNATMMCEYIEFVADRLLMQLGQPKYYNARNPFSFMNNISLEGKTNFFERRVGEYK 298
gb|AAF66689.1| ribonucleotide reductase small subunit [shrimp white spot syndrome virus] (413 aa) Score: 324 bits (830), Expect: 5.03941e-87 Length: 307, Idn/Pos/Gap = 160/210/6 (52%/68%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E +R+ PI H ++E YK+ VA FWT EEID D W +LT+ E+ F+ +LAF Sbjct: 62 ENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWE-KLTQDEKDFILQILAF 120 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FA+SDGIV+ENL R + +IPEAR F+ FQ+ ME+IH Y LID V D +++ L Sbjct: 121 FASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAIL 180 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A + P +++K WAI W+ S+ E +VAFAAVEGIFFSG+F +IFW+K RG++PG Sbjct: 181 FNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPG 240 Query: 384 LTFSNELISRDEGLHCDFACHLYS--MLPAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 LT SNE ISRDEGLH DFAC L + R ERI ++ +AV E+EF+ +LPV Sbjct: 241 LTSSNEFISRDEGLHRDFACMLLKKGFVDTPSR---ERILEIVTEAVRIEQEFLTVSLPV 297 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 L+GMN +LMS YIEFVAD+LLVE+G ++ +N NPF +M+ ISL+ KTNFFEKRV EYQ Sbjct: 298 KLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKRVAEYQ 357 Query: 502 KANVTTS 508 +A V S Sbjct: 358 RAQVMAS 364
gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus] gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus] ref|NP_477710.1| wsv188 [shrimp white spot syndrome virus] gb|AAK55515.1| ribonucleotide reductase small subunit [shrimp white spot syndrome virus] gb|AAK77767.1| ORF98, putative ribonucleotide reductase small subunit (RR2) [shrimp white spot syndrome virus] (413 aa) Score: 324 bits (830), Expect: 5.08163e-87 Length: 307, Idn/Pos/Gap = 160/210/6 (52%/68%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E +R+ PI H ++E YK+ VA FWT EEID D W +LT+ E+ F+ +LAF Sbjct: 62 ENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWE-KLTQDEKDFILQILAF 120 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FA+SDGIV+ENL R + +IPEAR F+ FQ+ ME+IH Y LID V D +++ L Sbjct: 121 FASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAIL 180 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A + P +++K WAI W+ S+ E +VAFAAVEGIFFSG+F +IFW+K RG++PG Sbjct: 181 FNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPG 240 Query: 384 LTFSNELISRDEGLHCDFACHLYS--MLPAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 LT SNE ISRDEGLH DFAC L + R ERI ++ +AV E+EF+ +LPV Sbjct: 241 LTSSNEFISRDEGLHRDFACMLLKKGFVDTPSR---ERILEIVTEAVRIEQEFLTVSLPV 297 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 L+GMN +LMS YIEFVAD+LLVE+G ++ +N NPF +M+ ISL+ KTNFFEKRV EYQ Sbjct: 298 KLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKRVAEYQ 357 Query: 502 KANVTTS 508 +A V S Sbjct: 358 RAQVMAS 364
gb|AAF33575.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera exigua nucleopolyhedrovirus] ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera exigua nucleopolyhedrovirus] (313 aa) Score: 318 bits (815), Expect: 2.28237e-85 Length: 298, Idn/Pos/Gap = 156/210/2 (52%/70%/0%) Query: 206 ADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFA 265 A R LFPI+H ++ YK+ + W EE+DL+ D D + +LT+ ER F+ +LAFFA Sbjct: 3 AARKVLFPIQHIDLWASYKQALDCMWKVEEVDLSKDYDDFTQKLTDNERNFIEKILAFFA 62 Query: 266 ASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFR 325 A+D IV N+ E R V EA+ FY Q+ ++ IH+E Y+LLI A +KD +++ L Sbjct: 63 AADSIVNINIIEHMQRTVPELEAQYFYNQQVLIQCIHTEMYNLLIHALIKDEKKQEMLLN 122 Query: 326 AMETMPCVRRKAYWAIRWIGSDA-SFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 E MPCVRRKA WA+++I + + ERLVAFA VEG+FFSGSF AIF++K +G+MPGL Sbjct: 123 GFENMPCVRRKAEWAMKYIDDEKITLAERLVAFAIVEGVFFSGSFAAIFYMKTKGVMPGL 182 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 TFSNELISRDEGLH +FAC LY ++++ A ++ M +AV E EF +ALP SL+ Sbjct: 183 TFSNELISRDEGLHTNFAC-LYYNTRVDQKLDAPTVNDMFSEAVAIEMEFFAEALPESLV 241 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 GMN +M YIEFVADRLLV+L Y +++ T NPF++M ISL+GKTNFFEKRVGEY++ Sbjct: 242 GMNANMMRKYIEFVADRLLVQLKYPKMYYTENPFEFMNNISLEGKTNFFEKRVGEYKR 299
ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata nucleopolyhedrovirus B] gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein [Mamestra configurata nucleopolyhedrovirus B] (313 aa) Score: 317 bits (811), Expect: 7.9787e-85 Length: 297, Idn/Pos/Gap = 153/206/2 (51%/69%/0%) Query: 206 ADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFA 265 A R TL+PI H ++E YKR A FW EE+DL+ D D ++ +L +R+F+ HVL FF+ Sbjct: 3 AARKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFS 62 Query: 266 ASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFR 325 A+D IV N+ + ++ V EA FY FQ AMEN+H++ Y LI + D +++ + Sbjct: 63 AADSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILN 122 Query: 326 AMETMPCVRRKAYWAIRWIGSDA-SFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 A + + CVR+K WA++W + + ERLVAFA VEG+FFSGSF AIF++K G+MPGL Sbjct: 123 AFDNISCVRKKDDWALKWTKNKKLTLAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGL 182 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 TFSNELISRDEG+H DFAC LY E++ E I M ++AV+ EKEF DALPV+L+ Sbjct: 183 TFSNELISRDEGMHTDFAC-LYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALL 241 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 GMN +M YIEFVADRLL++LG + +N NPF +M ISL+GKTNFFE+RVGEY+ Sbjct: 242 GMNADMMCEYIEFVADRLLLQLGQPKYYNARNPFPFMNNISLEGKTNFFERRVGEYK 298
gb|AAK14546.1| EsV-1-128 [Ectocarpus siliculosus virus] ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus] (419 aa) Score: 315 bits (807), Expect: 2.44062e-84 Length: 328, Idn/Pos/Gap = 153/216/8 (46%/65%/2%) Query: 198 PAIFKAEEADRYTLFPIK----HPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAE 253 P + E+ DR+ LF K + +F+ YK+ A FW EEIDL+ D W + ++ E Sbjct: 95 PMCVEEEDFDRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSD-E 153 Query: 254 RYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAY 313 ++F+ VLAFFA+ D IV+EN+ F ++ IP+ R + Q A E +H E+YSLLI Y Sbjct: 154 KHFLKLVLAFFASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTY 213 Query: 314 VKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAI 372 +D EE+ H+ R+++TMP + +KA WA +W+ + AS ERLV F +EG+ FSGSFCAI Sbjct: 214 FRDTEEQRHVMRSIQTMPIIEKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAI 273 Query: 373 FWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEK 432 +WLKKR GL+F+N LI+RDEGLH + +Y L + R+P ER+H + + AV E Sbjct: 274 YWLKKRQKFKGLSFANSLIARDEGLHATASVLIYKHL--KNRLPRERVHEIFKHAVSVEC 331 Query: 433 EFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNF 492 EF+ ALPV+LIG++++ M+ YI+FVAD L +LGYD+++N NPF+WM++ISLQGKTNF Sbjct: 332 EFISSALPVALIGISEKSMTEYIKFVADYWLNQLGYDKVYNCANPFEWMDMISLQGKTNF 391 Query: 493 FEKRVGEYQKANVTTSATDNVFALDIEF 520 FE RV EY K V F LD +F Sbjct: 392 FENRVAEYSKPGVLLEREKQQFCLDADF 419
gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit (214 aa) Score: 309 bits (792), Expect: 1.29525e-82 Length: 216, Idn/Pos/Gap = 149/178/3 (68%/82%/1%) Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVR 334 L ERF ++V+I EARCFYGFQIAMEN+HSE YS+LID Y++DP +R +LF A+ETMP V+ Sbjct: 1 LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVK 60 Query: 335 RKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 RKA WA+ WI S A+F ER++AFAAVEGIFFSGSF +IFWLKKRGLMPGLTFSNELISR Sbjct: 61 RKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISR 120 Query: 394 DEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSA 453 DEGLHCDFA ++ L +R ERI +IRDAV E+EF+ DALPV+LIGMN LMS Sbjct: 121 DEGLHCDFAVLMFQHLV--QRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMNCDLMSQ 178 Query: 454 YIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGK 489 YIEFVADRLLVELG +++NT NPF++ME+ISL GK Sbjct: 179 YIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGK 214
gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus] (328 aa) Score: 308 bits (789), Expect: 2.63248e-82 Length: 295, Idn/Pos/Gap = 153/202/6 (51%/68%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E +R+ PI H ++E YK+ VA FWT EEID D W +LT+ E+ F+ +LAF Sbjct: 38 ENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWE-KLTQDEKDFILQILAF 96 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FA+SDGIV+ENL R + +IPEAR F+ FQ+ ME+IH Y LID V D +++ L Sbjct: 97 FASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKAIL 156 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 F A + P +++K WAI W+ S+ E +VAFAAVEGIFFSG+F +IFW+K RG++PG Sbjct: 157 FNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPG 216 Query: 384 LTFSNELISRDEGLHCDFACHLYS--MLPAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 LT SNE ISRDEGLH DFAC L + R ERI ++ +AV E+EF+ +LPV Sbjct: 217 LTSSNEFISRDEGLHRDFACMLLKKGFVDTPSR---ERILEIVTEAVRIEQEFLTVSLPV 273 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKR 496 L+GMN +LMS YIEFVAD+LLVE+G ++ +N NPF +M+ ISL+ KTNFFEKR Sbjct: 274 KLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKR 328
ref|YP_142666.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga mimivirus] gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga mimivirus] (417 aa) Score: 307 bits (787), Expect: 3.99528e-82 Length: 303, Idn/Pos/Gap = 148/214/4 (48%/70%/1%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFF 264 ++++YT+ PIK+ K+++ YK + ++WT EE+DLA D++ W N L++ +R F+ HVLAFF Sbjct: 105 KSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFIMHVLAFF 164 Query: 265 AASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLF 324 AA+DGIV N+ E + V+I EA C YGFQ AMEN H E YSL++ +VKD R L Sbjct: 165 AAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDDALRNKLI 224 Query: 325 RAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGL--MP 382 +++TMP +++KA W +WI SD ++ +LVAF+ VEG+FFSGSF +IFWLK R + MP Sbjct: 225 NSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMP 284 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 GL SN+ I+RDE H + AC +YS+L R+ ++ +I +A+E E+EF+ D+LP Sbjct: 285 GLIISNQFIARDENKHVELACIMYSLL--NNRLKESVVYQIIDEAIEIEEEFINDSLPCK 342 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 502 L+GMN +LMS YI++VADRLLV+LGY + +N NPF++M+ I + K NFFEKR Y Sbjct: 343 LLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEKRNDAYSN 402 Query: 503 ANV 505 AN+ Sbjct: 403 ANI 405
gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a] (342 aa) Score: 305 bits (782), Expect: 1.5182e-81 Length: 303, Idn/Pos/Gap = 144/208/4 (47%/68%/1%) Query: 219 IFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAER 278 ++ YK+ +A FWT EEIDL D+ W ++ +E E+ F+ H+LAFFA+ D IV+EN++ Sbjct: 43 VYALYKKEIACFWTVEEIDLNEDVACW-DKCSEDEQRFIGHILAFFASLDQIVMENVSVN 101 Query: 279 FMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAY 338 F +++IP+ R + Q A+E+IH ETY+LLI Y+KDPE++ + R+++ MP + +KA Sbjct: 102 FGDEIKIPQIRSHFAMQNAIESIHGETYALLIQTYIKDPEKQVTMLRSIQEMPIITKKAQ 161 Query: 339 WAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGL 397 W W+ + AS ERLVAF VEG+ FSG+FCAI+WLKK+G GL F+N LI+RDEGL Sbjct: 162 WVTAWMDPEVASLAERLVAFTCVEGVQFSGAFCAIYWLKKQGRFRGLCFANSLIARDEGL 221 Query: 398 HCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEF 457 H + + +Y+ L + R+P +H + DAV EKEF+ ++LPVSLIG+N MS+YIE+ Sbjct: 222 HAEGSVMIYNHL--KHRLPVAVVHDIFTDAVALEKEFIRESLPVSLIGINADTMSSYIEY 279 Query: 458 VADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALD 517 V+D + LGY +L+ T NPF+WM +I ++GK+NFFE RV EY KA T+ D F D Sbjct: 280 VSDFWIQRLGYPKLFGTKNPFEWMTMIGMEGKSNFFEGRVAEYAKAGSMTNEDDRAFTTD 339 Query: 518 IEF 520 F Sbjct: 340 AVF 342
gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus] (219 aa) Score: 273 bits (698), Expect: 8.9264e-72 Length: 202, Idn/Pos/Gap = 130/161/3 (64%/79%/1%) Query: 320 RTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQERLVAFAAVEGIFFSGSFCAIFWLKKR 378 + +LF A++ +PCV++KA WA+ WI S A+F ER+VAFAAVEGIFFSGSF +IFWLKKR Sbjct: 20 KRYLFNAIDNLPCVKKKADWALNWISSKQANFGERVVAFAAVEGIFFSGSFASIFWLKKR 79 Query: 379 GLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDA 438 GLMPGLTFSNELISRDEGLH DFAC ++ L ++ ER+ +IR+AV E+EF+ A Sbjct: 80 GLMPGLTFSNELISRDEGLHTDFACLMFKYLV--QKPSQERVIEIIREAVLIEQEFLTKA 137 Query: 439 LPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVG 498 LPV L+GMN +LMS YIEFVADRLL+ELG D+++NT NPF +ME ISL+GKTNFFEK+VG Sbjct: 138 LPVDLLGMNCELMSQYIEFVADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEKKVG 197 Query: 499 EYQKANVTTSATDNVFALDIEF 520 EYQK V + DNVF LD +F Sbjct: 198 EYQKWGVMANRLDNVFTLDADF 219
gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain [Arabidopsis thaliana] (243 aa) Score: 269 bits (687), Expect: 1.58794e-70 Length: 195, Idn/Pos/Gap = 129/154/9 (66%/78%/4%) Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 V +KA WA++WI SF ER+VAFA VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELIS Sbjct: 51 VTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELIS 110 Query: 393 RDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMS 452 RDEGLHCDFAC +YS+L + +R+ +++ DAVE E+EFVCDAL +L+GMN++LMS Sbjct: 111 RDEGLHCDFACLIYSLL--RTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMS 168 Query: 453 AYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSA--- 509 YIEFVADRLL LG +++ NPFDWMELISLQGKTNFFEKRVGEYQKA+V +S Sbjct: 169 QYIEFVADRLLAALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSVHGN 228 Query: 510 ----TDNVFALDIEF 520 D+VF LD +F Sbjct: 229 AAFNDDHVFKLDEDF 243
gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae] (345 aa) Score: 268 bits (686), Expect: 2.35042e-70 Length: 326, Idn/Pos/Gap = 142/215/7 (43%/65%/2%) Query: 187 ERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR 246 ER D + + I E + R+ +FPIK+ +I+ YK+ ASFWTAEEI+LA D + ++ Sbjct: 14 ERHDMK-EAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQ 72 Query: 247 NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETY 306 +LT+ ++ ++ ++LA +SD +V + L E F ++ PE + FYGFQI MENIHSE Y Sbjct: 73 -KLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIHSEVY 131 Query: 307 SLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDAS-FQERLVAFAAVEGIFF 365 S+++DA+ KDP+ LF+ + +P V+ KA + RWI +D S + ERLVAFAA EGIF Sbjct: 132 SMMVDAFFKDPKN-IPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQ 190 Query: 366 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIR 425 +G++ ++FWL + +MPGL +N I RD G + DF+C L++ L + + I +I Sbjct: 191 AGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPN--PKIIEKIIT 248 Query: 426 DAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELIS 485 +AVE EKE+ ++LPV GM+ + + YIEFVAD LL G ++ +N NPF++ME ++ Sbjct: 249 EAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVA 308 Query: 486 LQGKTNFFEKRVGEYQKA-NVTTSAT 510 GKT FFEK+V +YQKA +++ SAT Sbjct: 309 TAGKTTFFEKKVSDYQKASDMSKSAT 334
emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae] sp|P49723|RIR4_YEAST Ribonucleoside-diphosphate reductase small chain 2 (Ribonucleotide reductase small subunit 2) gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae] pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer From Saccharomyces Cerevisiae pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer From Saccharomyces Cerevisiae ref|NP_011696.1| Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits [Saccharomyces cerevisiae] pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer (345 aa) Score: 266 bits (680), Expect: 1.24702e-69 Length: 326, Idn/Pos/Gap = 141/215/7 (43%/65%/2%) Query: 187 ERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR 246 ER D + + I E + R+ +FPIK+ +I+ YK+ ASFWTAEEI+LA D + ++ Sbjct: 14 ERHDMK-EAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQ 72 Query: 247 NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETY 306 +LT+ ++ ++ ++LA +SD +V + L E F ++ PE + FYGFQI MENI+SE Y Sbjct: 73 -KLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVY 131 Query: 307 SLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDAS-FQERLVAFAAVEGIFF 365 S+++DA+ KDP+ LF+ + +P V+ KA + RWI +D S + ERLVAFAA EGIF Sbjct: 132 SMMVDAFFKDPKN-IPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQ 190 Query: 366 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIR 425 +G++ ++FWL + +MPGL +N I RD G + DF+C L++ L + + I +I Sbjct: 191 AGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPN--PKIIEKIIT 248 Query: 426 DAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELIS 485 +AVE EKE+ ++LPV GM+ + + YIEFVAD LL G ++ +N NPF++ME ++ Sbjct: 249 EAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVA 308 Query: 486 LQGKTNFFEKRVGEYQKA-NVTTSAT 510 GKT FFEK+V +YQKA +++ SAT Sbjct: 309 TAGKTTFFEKKVSDYQKASDMSKSAT 334
gb|AAS21007.1| ribonucleoside-diphosphate reductase R2 [Hyacinthus orientalis] (197 aa) Score: 258 bits (660), Expect: 2.219e-67 Length: 181, Idn/Pos/Gap = 120/149/1 (66%/82%/0%) Query: 203 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 262 A DR+ +FPIK+P+I+E YK+ ASFWTAEE+DL+ D HW LT ER+F++HVLA Sbjct: 15 APNPDRFCMFPIKYPEIWEMYKKAEASFWTAEEVDLSQDTRHWE-ALTADERHFITHVLA 73 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FFAASDGIVLENLA RFM++V++ EAR FYGFQIA+ENIHSE YSLL+++Y+KDP+E+ Sbjct: 74 FFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDPDEKNR 133 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 LF A+ET+PCV +KA WA+RWI SF +R+VAFA VEGIFFSG C+IFWLKKRGLMP Sbjct: 134 LFHAIETIPCVAKKAEWALRWIDGGKSFAQRVVAFACVEGIFFSGVSCSIFWLKKRGLMP 193 Query: 383 G 383 G Sbjct: 194 G 194
emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis] (198 aa) Score: 252 bits (644), Expect: 1.87904e-65 Length: 200, Idn/Pos/Gap = 129/155/4 (64%/77%/2%) Query: 323 LFRAMETMPCVR-RKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGL 380 + RA P R +KA WA+ WIG+ AS+ ER+VAFAAVEGIFFSGSF AIFWLKKRGL Sbjct: 1 MLRARWPRPPHRWKKADWALNWIGNQKASYGERVVAFAAVEGIFFSGSFAAIFWLKKRGL 60 Query: 381 MPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALP 440 MPGLTFSNELISRDEGLHCDFAC ++ L + A+ + ++IR+AVE E+EF+ +ALP Sbjct: 61 MPGLTFSNELISRDEGLHCDFACLMFKHLL--HKPSAQTVGAIIRNAVEIEQEFLTEALP 118 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEY 500 V LIGMN QLM YIEFVADRLL+ELG+ +++ NPFD+ME ISL+GKTNFFEKRVGEY Sbjct: 119 VKLIGMNCQLMKRYIEFVADRLLLELGFAKIYRAENPFDFMENISLEGKTNFFEKRVGEY 178 Query: 501 QKANVTTSATDNVFALDIEF 520 Q+ V A DN F LD +F Sbjct: 179 QRMGVMAGAADNTFRLDADF 198
emb|CAG59473.1| unnamed protein product [Candida glabrata CBS138] ref|XP_446546.1| unnamed protein product [Candida glabrata] (335 aa) Score: 248 bits (634), Expect: 2.62426e-64 Length: 306, Idn/Pos/Gap = 130/197/6 (42%/64%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPIK+ +I+ YK+ A+FWTAE+++LA D+ W L+ ++ F + LA Sbjct: 13 ENKRRFVMFPIKYHEIWAAYKKVEAAFWTAEDMELAKDVKDWET-LSAGQKEFFGNYLAI 71 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 + +D IV +N+ E+F +++ PE + FYGFQI MENI+ E YS+L+DA + L Sbjct: 72 CSRTDNIVNKNIVEKFSAELQNPEGKSFYGFQIMMENIYDEIYSMLVDALFTSVDN-IPL 130 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDAS-FQERLVAFAAVEGIFFSGSFCAIFWL-KKRGLM 381 F+A+ V+ K+ WA RW+ D S + ERLVA AA EGIF SG+F A++WL K++G+M Sbjct: 131 FKAVCQQEEVKAKSEWAHRWVFDDESLYAERLVASAAREGIFMSGAFAALYWLTKEKGIM 190 Query: 382 PGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 PG+ + I RD G + DFAC L++ L + + I +I +AVE EK +++P+ Sbjct: 191 PGVAMATNHICRDRGFYADFACLLFAHLKTKPN--PKIIEQIITEAVEIEKAHYRNSMPI 248 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQ 501 +GM+ + + YIE VAD+LLV G ++ +N NPF +ME + GKTNFFEK+V +YQ Sbjct: 249 EKLGMDLKEIDQYIESVADKLLVSFGNEKFYNATNPFPFMEEATSIGKTNFFEKKVSDYQ 308 Query: 502 KANVTT 507 KA+ T+ Sbjct: 309 KASATS 314
gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans] ref|NP_508269.1| ribonucleotide reductase R2 family member (XC45) [Caenorhabditis elegans] pir||T29884 hypothetical protein F19G12.2 - Caenorhabditis elegans (668 aa) Score: 241 bits (614), Expect: 5.1186e-62 Length: 227, Idn/Pos/Gap = 125/158/5 (55%/69%/2%) Query: 296 IAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-DASFQERL 354 IA+ENIHSE Y+ L++AY++D ER LF A+ T ++ KA W +RWI +A F ERL Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWISDHNAPFSERL 504 Query: 355 VAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER 414 AFAAVEGIFFS SF AIFWLKKRGL+PGLT SNELIS LH + C + R Sbjct: 505 AAFAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELISMFL-LHPN--CFFSTFNLQRRR 561 Query: 415 VPAE-RIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN 473 PAE RI +I ++V E++FV ++LP +LIGMNQ +M Y+EFVAD LL ELGY + +N Sbjct: 562 KPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN 621 Query: 474 TPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 T NPFD+ME IS++GKTNFFEKRV EYQ+ + ++ VF L F Sbjct: 622 TKNPFDFMENISIEGKTNFFEKRVSEYQRPEMMVDESEKVFDLSALF 668
gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo sapiens] (172 aa) Score: 236 bits (602), Expect: 1.26075e-60 Length: 177, Idn/Pos/Gap = 116/141/8 (65%/79%/4%) Query: 347 DASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLY 406 +A++ ER+VAFAAVEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFAC ++ Sbjct: 1 EATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMF 60 Query: 407 SML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLL 463 L P+EERV +I +AV E+EF+ +ALPV LIGMN LM YIEFVADRL+ Sbjct: 61 KHLVHKPSEERV-----REIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 115 Query: 464 VELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 +ELG+ +++ NPFD+ME ISL+GKTNFFEKRVGEYQ+ V +S T+N F LD +F Sbjct: 116 LELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENSFTLDADF 172
emb|CAC44510.1| putative ribonucleotide reductase small subunit [Sphaerechinus granularis] (141 aa) Score: 232 bits (591), Expect: 2.62807e-59 Length: 141, Idn/Pos/Gap = 112/123/1 (79%/87%/0%) Query: 259 HVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE 318 HVLAFFAASDGIV ENL ERF ++V+I EARCFYGFQIA+ENIHSE YSLLIDAY+KD Sbjct: 1 HVLAFFAASDGIVNENLVERFSQEVQIAEARCFYGFQIAIENIHSEMYSLLIDAYIKDAV 60 Query: 319 ERTHLFRAMETMPCVRRKAYWAIRWIGSD-ASFQERLVAFAAVEGIFFSGSFCAIFWLKK 377 +R +LF A+ETMPCV +KA WA+ WI SD A F R+VAFAAVEGIFFSGSF AIFWLKK Sbjct: 61 QRDYLFNAVETMPCVTKKAQWALDWISSDSADFGTRIVAFAAVEGIFFSGSFAAIFWLKK 120 Query: 378 RGLMPGLTFSNELISRDEGLH 398 RGLMPGLTFSNELISRDEGLH Sbjct: 121 RGLMPGLTFSNELISRDEGLH 141
pir||RDVZAS ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - African swine fever virus (strain Malawi LIL20/1) sp|P26713|RIR2_ASFM2 Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (327 aa) Score: 226 bits (576), Expect: 1.20024e-57 Length: 322, Idn/Pos/Gap = 122/185/15 (37%/57%/4%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E + R+T+FPI+HP+ + +YK+ + WTA+E+D+ D+D W + + +R F +LAF Sbjct: 7 ENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWE-AMPKPQREFYKQILAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 F +D IV+ENL FMR++++ E FY Q A E +HSE YS+ + + D +E+ + Sbjct: 66 FVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRI 125 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F +E P +++ A W +W+ + S ERLV FAAVEGI F F AI +LK++ +MP Sbjct: 126 FSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMP 185 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDALPV 441 GL NE ISRDEG+HC FAC L S +P E+ IH ++++AVE EF+ A Sbjct: 186 GLVSYNEFISRDEGMHCSFACFLISNYVYN--IPEEKIIHKILKEAVELVDEFINYAFDK 243 Query: 442 S---LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQ--GKTNFFEKR 496 + + G +++++ YI + D L + ++N NPF M L KTNFFE R Sbjct: 244 ARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYNVGNPFPQMTKFFLNEVEKTNFFELR 303 Query: 497 VGEYQKANVTTSATDNVFALDI 518 +YQ D+ FA + Sbjct: 304 PTQYQNC-----VKDDAFAFKL 320
ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus] gb|AAA65274.1| ribonucleotide reductase small subunit sp|P42492|RIR2_ASFB7 Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) prf||2113434AT ribonucleotide reductase:SUBUNIT=small (334 aa) Score: 226 bits (575), Expect: 1.83684e-57 Length: 322, Idn/Pos/Gap = 121/184/15 (37%/57%/4%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E + R+T+FPI+HP+ + +YK+ + WTA+E+D+ D+D W + + +R F +LAF Sbjct: 14 ENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWE-AMPKPQREFYKQILAF 72 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 F +D IV+ENL FMR++++ E FY Q A E +HSE YS+ + + D +E+ + Sbjct: 73 FVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRI 132 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDA-SFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 F +E P +++ A W +W+ D + ERLV FAAVEGI F F AI +LK++ +MP Sbjct: 133 FSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMP 192 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDALPV 441 GL NE ISRDEG+HC FAC L S +P E+ IH ++++AVE EF+ A Sbjct: 193 GLVSYNEFISRDEGVHCSFACFLISNYVYN--IPEEKIIHKILKEAVELVDEFINYAFDK 250 Query: 442 S---LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQ--GKTNFFEKR 496 + + G +++++ YI + D L + ++ NPF M L KTNFFE R Sbjct: 251 ARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFELR 310 Query: 497 VGEYQKANVTTSATDNVFALDI 518 +YQ D+ FA + Sbjct: 311 PTQYQNC-----VKDDAFAFKL 327
emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium berghei] (158 aa) Score: 214 bits (544), Expect: 6.06221e-54 Length: 160, Idn/Pos/Gap = 96/126/2 (60%/78%/1%) Query: 361 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERI 420 EGI FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF C +YS+L E ++P E + Sbjct: 1 EGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLL--ENKLPEEVV 58 Query: 421 HSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDW 480 +++++AVE E+ F+C++LP LIGMN +LMS YIEFVADRLL LG +++++ NPF+W Sbjct: 59 QNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNW 118 Query: 481 MELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 M+LISLQGKTNFFEKRV +YQK+ V + VF+L+ +F Sbjct: 119 MDLISLQGKTNFFEKRVADYQKSGVMAQRKEQVFSLNTDF 158
ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio bacteriovorus HD100] emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio bacteriovorus HD100] (336 aa) Score: 203 bits (517), Expect: 9.13203e-51 Length: 323, Idn/Pos/Gap = 108/171/18 (33%/52%/5%) Query: 210 TLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDG 269 TL P+K+P +E YK + + WT +E+D + D+ +++TE+E++ + ++AFFA D Sbjct: 14 TLRPMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSKMTESEKHLIRRLVAFFATGDS 73 Query: 270 IVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMET 329 IV NL + V PE R + Q+ E +H + Y L+D Y+ +P+ER F A+E Sbjct: 74 IVGNNLVLNLYKHVNSPEGRMYLSRQLYEEALHVQFYLTLLDNYIPNPDERAEAFAAVEN 133 Query: 330 MPCVRRKAYWAIRWIGSDASFQE------------RLVAFAA-VEGIFFSGSFCAIFWLK 376 +P +++KA + +WI S E L+ FA VEG+FF +F +++L+ Sbjct: 134 IPSIKKKADFCYKWIDSINELTELNTIEDRRRFLMNLICFATCVEGLFFYAAFAYVYFLR 193 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECE 431 +GL+ GL + RDE +H FA + EE + + + M+ DA+ECE Sbjct: 194 SKGLLAGLASGTNWVFRDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECE 253 Query: 432 KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTN 491 EF D L + + G++ + M Y+E+ AD+ L L +N NPF +MEL +Q N Sbjct: 254 MEFAHDVLNLGVAGLSAKDMRQYLEYCADQRLESLNIAPRYNVKNPFIFMELQDMQELAN 313 Query: 492 FFEKRVGEYQKANVTTSATDNVF 514 FFE+RV YQ A D F Sbjct: 314 FFERRVSAYQTGVSGAVAFDEAF 336
dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain [Streptomyces avermitilis MA-4680] ref|NP_824203.1| putative ribonucleoside-diphosphate reductase beta chain [Streptomyces avermitilis MA-4680] (338 aa) Score: 203 bits (516), Expect: 1.28569e-50 Length: 323, Idn/Pos/Gap = 116/174/19 (35%/53%/5%) Query: 210 TLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDG 269 TL P+++P +E Y+ + + WT EE+DL +D+ +LT AE++ + ++AFFA D Sbjct: 17 TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLA-KLTPAEQHLIGRLVAFFATGDS 75 Query: 270 IVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMET 329 IV NL + + PEAR + Q+ E +H + Y L+D Y+ DPE+RT F A+E Sbjct: 76 IVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAVEN 135 Query: 330 MPCVRRKAYWAIRWI------------GSDASFQERLVAFAA-VEGIFFSGSFCAIFWLK 376 +P +R KA + +WI F L+ FAA +EG+FF G+F ++W + Sbjct: 136 IPSIREKAEFCFKWINEVEKLDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFR 195 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECE 431 RGL+ GL + RDE +H FA + + EE +++ M+R+AVE E Sbjct: 196 SRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAE 255 Query: 432 KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTN 491 +F D L GMN + M Y+E VAD+ L LG+ ++ + NPF +MEL +Q TN Sbjct: 256 LQFGRDLCGDGLPGMNTESMRQYLECVADQRLQRLGFAPVYGSENPFSFMELQGVQELTN 315 Query: 492 FFEKRVGEYQKANVTTSATDNVF 514 FFE+R YQ A T D F Sbjct: 316 FFERRASAYQVAVEGTVDLDEDF 338
emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis] (369 aa) Score: 199 bits (505), Expect: 2.30631e-49 Length: 151, Idn/Pos/Gap = 93/122/2 (61%/80%/1%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPI++ +++ YK+ ASFWTAEE+DL+ D+ HW + L + ER+F+SHVLAF Sbjct: 7 ENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWES-LKDDERFFISHVLAF 65 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 FAASDGIV ENL ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+K+P ER +L Sbjct: 66 FAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYL 125 Query: 324 FRAMETMPCVRRKAYWAIRWIGSD-ASFQER 353 F A+ET+PCV++KA WA+ WIG+ AS+ ER Sbjct: 126 FNAIETLPCVKKKADWALNWIGNQKASYGER 156 Score: 68 bits (165), Expect: 6.34842e-10 Length: 51, Idn/Pos/Gap = 31/38/0 (60%/74%/0%) Query: 470 RLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 +++ NPFD+ME ISL+GKTNFFEKRVGEYQ+ V A DN F LD +F Sbjct: 319 QIYRAENPFDFMENISLEGKTNFFEKRVGEYQRMGVMAGAADNTFRLDADF 369
emb|CAC17630.1| ribonucleotide-diphosphate reductase small chain [Streptomyces jumonjinensis] (322 aa) Score: 197 bits (502), Expect: 5.13793e-49 Length: 305, Idn/Pos/Gap = 107/169/19 (35%/55%/6%) Query: 210 TLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDG 269 TL P+++P +E Y+ + + WT EE+DL +D+ +LT E++ + ++AFFA D Sbjct: 18 TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLA-KLTPGEQHLIGRLVAFFATGDS 76 Query: 270 IVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMET 329 IV NL + + PEAR + Q+ E +H + Y L+D Y+ DPE+RT F A+E Sbjct: 77 IVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAVEN 136 Query: 330 MPCVRRKAYWAIRWIGS------------DASFQERLVAFAA-VEGIFFSGSFCAIFWLK 376 +P +R KA + +W+ S F L+ FAA +EG+FF G+F ++W + Sbjct: 137 IPSIREKAQFCFKWMDSVEKIDQLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFR 196 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECE 431 RGL+ GL + RDE +H +FA + + EE +++ M+++AVE E Sbjct: 197 SRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAE 256 Query: 432 KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTN 491 +F D L GMN + M Y++ VAD+ L LG+ ++ + NPF +MEL +Q TN Sbjct: 257 LQFGSDLCGDGLPGMNTESMREYLQCVADQRLTRLGFAPVYGSENPFSFMELQGVQELTN 316 Query: 492 FFEKR 496 FFE+R Sbjct: 317 FFERR 321
emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces coelicolor A3(2)] emb|CAB82486.1| ribonucleotide-diphosphate reductase small subunit chain [Streptomyces coelicolor A3(2)] ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces coelicolor A3(2)] (343 aa) Score: 197 bits (502), Expect: 5.22438e-49 Length: 314, Idn/Pos/Gap = 113/170/23 (35%/54%/7%) Query: 210 TLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDG 269 TL P+++P +E Y+ + + W EE+DL +D+ +L+ E++ + ++AFFA D Sbjct: 22 TLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLA-KLSPMEQHLIGRLVAFFATGDS 80 Query: 270 IVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMET 329 IV NL + + PEAR + Q+ E +H + Y L+D Y+ DPE+R F A+E Sbjct: 81 IVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVEN 140 Query: 330 MPCVRRKAYWAIRWIGSDAS------------FQERLVAFAA-VEGIFFSGSFCAIFWLK 376 +P +R KA + RW+ S S F L+ FAA +EG+FF G+F ++W + Sbjct: 141 IPSIREKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFR 200 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPA-------ERIHSMIRDAVE 429 RGL+ GL + RDE +H FA + + EE P E++ M+R+AVE Sbjct: 201 SRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEE--PELFDDQLREQVTDMLREAVE 258 Query: 430 CEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGK 489 E +F D L GMN M Y+E VAD+ L LG+ ++ + NPF +MEL +Q Sbjct: 259 AELQFARDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQEL 318 Query: 490 TNFFEKRVGEYQKA 503 TNFFE+R YQ A Sbjct: 319 TNFFERRPSAYQVA 332
emb|CAB90708.2| ribonucleotide-diphosphate reductase small subunit chain [Streptomyces clavuligerus] (322 aa) Score: 195 bits (495), Expect: 3.27519e-48 Length: 305, Idn/Pos/Gap = 105/168/19 (34%/55%/6%) Query: 210 TLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDG 269 TL P+++P +E Y+ + + WT EE+DL +D+ +L+ E++ + ++AFFA D Sbjct: 18 TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVPDLA-KLSPGEQHLIGRLVAFFATGDS 76 Query: 270 IVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMET 329 IV NL + + PEAR + Q+ E +H + Y L+D Y+ DPE+R F A+E Sbjct: 77 IVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRNAAFAAVEN 136 Query: 330 MPCVRRKAYWAIRWIGSDASFQE------------RLVAFAA-VEGIFFSGSFCAIFWLK 376 +P +R KA + RW+ S + L+ FAA +EG+FF G+F ++W + Sbjct: 137 IPSIREKAQFCFRWMDSVEKLDQLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFR 196 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECE 431 RGL+ GL + RDE +H +FA + + EE +++ M+++AVE E Sbjct: 197 SRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAE 256 Query: 432 KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTN 491 +F D L GMN + M Y++ VAD+ L LG+ ++ + NPF +MEL +Q TN Sbjct: 257 LQFSRDLCGDGLPGMNTESMREYLQCVADQRLARLGFAPVYGSENPFSFMELQGVQELTN 316 Query: 492 FFEKR 496 FFE+R Sbjct: 317 FFERR 321
gb|EAL61578.1| hypothetical protein DDB0184057 [Dictyostelium discoideum] (257 aa) Score: 193 bits (490), Expect: 1.36421e-47 Length: 174, Idn/Pos/Gap = 96/126/3 (55%/72%/1%) Query: 219 IFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAER 278 I++ YK+ +A+ W EEI+ + D W +LT ER F S+VLAFF AS GI+ +NL R Sbjct: 87 IWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-NR 145 Query: 279 FMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAY 338 FM V+IPEA+CFY +QI ++ +HSETYSLLI+ +KD + LF A+ET+PCV++KA Sbjct: 146 FMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKAE 205 Query: 339 WAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 WA++WI + SF++RLVA A E IFFSGSF I LKKR LM GLTFSNELI+ Sbjct: 206 WALKWI--NESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257
emb|CAC17632.1| ribonucleotide-diphosphate reductase small chain [Streptomyces microflavus] (321 aa) Score: 184 bits (467), Expect: 5.18699e-45 Length: 305, Idn/Pos/Gap = 106/168/19 (34%/55%/6%) Query: 210 TLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDG 269 TL P+++P +E Y+ + + WT EE+DL +D+ +L+ E++ + ++AFFA D Sbjct: 17 TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLA-KLSPGEQHMIGRLVAFFATGDS 75 Query: 270 IVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMET 329 IV NL + + PEAR + Q+ E +H + Y L+D Y+ DP ER F A+E Sbjct: 76 IVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPAERAAAFAAVEN 135 Query: 330 MPCVRRKAYWAIRWIGS------------DASFQERLVAFAA-VEGIFFSGSFCAIFWLK 376 +P +R KA + +W+ S F L+ FAA +EG+FF G+F ++W + Sbjct: 136 IPSIRDKAQFCFKWMDSVEKIDQLETRADRRRFLLNLICFAACIEGLFFYGAFAYVYWFR 195 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECE 431 RGL+ GL + RDE +H +FA + + EE E++ +M+++AVE E Sbjct: 196 SRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAE 255 Query: 432 KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTN 491 +F D L GMN + M Y++ VAD+ L LG+ ++ + NPF +MEL +Q TN Sbjct: 256 LQFGRDLCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVYGSENPFAFMELQGVQELTN 315 Query: 492 FFEKR 496 FFE+R Sbjct: 316 FFERR 320
ref|XP_139393.4| similar to Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus] (213 aa) Score: 176 bits (447), Expect: 1.23602e-42 Length: 152, Idn/Pos/Gap = 83/116/2 (54%/76%/1%) Query: 186 SERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW 245 SE + VRS+ + + + + R+ +FPI++P I+ YK+ ASFWT EE+DL+ ++ HW Sbjct: 63 SETEENVVRSNEEPLLR-KSSRRFVIFPIQYPDIWRMYKQARASFWTGEEVDLSKNLPHW 121 Query: 246 RNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSET 305 N+L E+YF+SH+LAFFAASDGIV ENL ERF ++V++PE CFYGFQI +EN+HSE Sbjct: 122 -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPETHCFYGFQILIENVHSEM 180 Query: 306 YSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 YSLLID Y++DP++R LF A+ETMP V++KA Sbjct: 181 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKA 212
ref|XP_607398.1| PREDICTED: similar to hypothetical protein, partial [Bos taurus] (175 aa) Score: 164 bits (415), Expect: 5.79132e-39 Length: 116, Idn/Pos/Gap = 71/97/1 (61%/83%/0%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 + + R+ +FPI++P I++ YK+ ASFWTAEE+DL+ D+ HW N+L E+YF+SH+LAF Sbjct: 61 KSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHW-NKLKSEEKYFISHILAF 119 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE 319 FAASDGIV ENL ERF ++V++PEARCFYGFQI +EN+HSE YSLLID Y++DP++ Sbjct: 120 FAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKK 175
ref|NP_280997.1| NrdA [Halobacterium sp. NRC-1] gb|AAG20477.1| ribonucleoside reductase small chain; NrdA [Halobacterium sp. NRC-1] pir||A84389 ribonucleoside reductase small chain [imported] - Halobacterium sp. NRC-1 (331 aa) Score: 163 bits (412), Expect: 1.47444e-38 Length: 329, Idn/Pos/Gap = 107/167/26 (32%/50%/7%) Query: 197 VPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR-NRLTEAERY 255 +P + E D + PI + E+Y++ VA+ WT EE+ + D+ W+ N LT+AER Sbjct: 1 MPVLDSDAEHDPNKILPIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQ 60 Query: 256 FVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVK 315 V L FF+ ++ + N+ V PE R + Q E +H++T+ D+ Sbjct: 61 LVEWNLGFFSTAESLTANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGF 120 Query: 316 DPEERTHLFRAMETMPCVRRKAYWAIRWIGS--DASFQ-----------ERLVAFAAV-E 361 DPE H++ + +P + K + + + D +F LV F + E Sbjct: 121 DPE---HMYGMYDRIPSIAEKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDLVGFYVIME 177 Query: 362 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RV 415 GIFF F + LK+RG M G+ E I RDE LH +F L + + E Sbjct: 178 GIFFYAGFAMMLALKRRGKMVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTADF 237 Query: 416 PAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP 475 AE ++S++RDAV+ E+ + DA P L+GM+ + + Y+E+VADR +L D ++ T Sbjct: 238 EAE-VNSLMRDAVDLEQLYARDACPDDLLGMSSEQFADYVEYVADRRFQQLRMDPVYGTD 296 Query: 476 NPFDWM-ELISLQGKTNFFEKRVGEYQKA 503 NPF WM E + L +TNFFE+ V EYQ+ Sbjct: 297 NPFPWMTEQVDLNTETNFFERNVSEYQQG 325
dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form gamma [Homo sapiens] (139 aa) Score: 159 bits (401), Expect: 2.27605e-37 Length: 133, Idn/Pos/Gap = 79/97/8 (59%/72%/6%) Query: 391 ISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMN 447 + +DEGLHCDFAC ++ L P+EERV +I DAV+ E+EF+ +ALPV LIGMN Sbjct: 12 LDQDEGLHCDFACLMFQYLVNKPSEERV-----REIIVDAVKIEQEFLTEALPVGLIGMN 66 Query: 448 QQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTT 507 LM YIEFVADRLLVELG+ +++ NPFD+ME ISL+GKTNFFEKRV EYQ+ V Sbjct: 67 CILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMA 126 Query: 508 SATDNVFALDIEF 520 TDNVF LD +F Sbjct: 127 ETTDNVFTLDADF 139
emb|CAH15978.1| hypothetical protein [Legionella pneumophila str. Lens] ref|YP_127077.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens] (367 aa) Score: 155 bits (393), Expect: 2.00887e-36 Length: 343, Idn/Pos/Gap = 108/165/27 (31%/48%/7%) Query: 182 GLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAAD 241 GL+ E G R+ I AD L P K+ ++ Y A+ W EI ++AD Sbjct: 19 GLEALEMGAARIHVDDKQIINCR-ADLNQLVPFKYKWAWDKYLTACANHWMPNEISMSAD 77 Query: 242 MDHWRNR--LTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAME 299 + W++ LTE ER + L FF+ +D +V NL R + PE R + Q E Sbjct: 78 VALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 137 Query: 300 NIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS------------- 346 +H+ Y +I++ D E +++R +P V RKA WA+ + S Sbjct: 138 ALHTHAYQYIIESLGLDEAEVFNMYR---EIPSVSRKAVWALPFTQSLGDETFHTGTPEN 194 Query: 347 DASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHL 405 D L+AF V EGIFF F I + +R M G + + I RDE +H +F + Sbjct: 195 DQRLLRDLIAFYVVFEGIFFYVGFTQILSMGRRNKMVGTSEQFQYILRDESMHMNFGIDV 254 Query: 406 YSMLPAEER---VP--AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVAD 460 + + E P I +IR+ VE E ++ D +P ++GMN ++ Y+ F+A+ Sbjct: 255 INQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGMNAEMFEEYLHFIAN 314 Query: 461 RLLVELGY-DRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 R L ++G D+ NPF WM E++ L+ + NFFE RV EYQ Sbjct: 315 RRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQ 357
emb|CAH12891.1| hypothetical protein [Legionella pneumophila str. Paris] ref|YP_124057.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris] (367 aa) Score: 155 bits (391), Expect: 3.28661e-36 Length: 343, Idn/Pos/Gap = 108/165/27 (31%/48%/7%) Query: 182 GLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAAD 241 GL+ E G R+ I AD L P K+ ++ Y A+ W EI ++AD Sbjct: 19 GLETLEMGAARIHVDDKQIINCR-ADLNQLVPFKYKWAWDKYLTACANHWMPNEISMSAD 77 Query: 242 MDHWRNR--LTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAME 299 + W++ LTE ER + L FF+ +D +V NL R + PE R + Q E Sbjct: 78 VALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 137 Query: 300 NIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS------------- 346 +H+ Y +I++ D E +++R +P V RKA WA+ + S Sbjct: 138 ALHTHAYQYIIESLGLDEAEVFNMYR---EIPSVSRKAVWALPFTQSLGDETFHTGTPEN 194 Query: 347 DASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHL 405 D L+AF V EGIFF F I + +R M G + + I RDE +H +F + Sbjct: 195 DQRLLRDLIAFYVVFEGIFFYVGFTQILSMGRRNKMVGTSEQFQYILRDESMHMNFGIDV 254 Query: 406 YSMLPAEER---VP--AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVAD 460 + + E P I +IR+ VE E ++ D +P ++GMN ++ Y+ F+A+ Sbjct: 255 INQIKIENPHLWTPEFKNEIIQLIREGVELEYQYARDTMPHGILGMNAEMFEEYLHFIAN 314 Query: 461 RLLVELGY-DRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 R L ++G D+ NPF WM E++ L+ + NFFE RV EYQ Sbjct: 315 RRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQ 357
ref|YP_095801.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] (381 aa) Score: 154 bits (389), Expect: 5.79636e-36 Length: 344, Idn/Pos/Gap = 108/165/29 (31%/47%/8%) Query: 182 GLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAAD 241 GL+ E G R+ I AD L P K+ ++ Y A+ W EI ++AD Sbjct: 33 GLETLEMGAARIHVDDKQIINCR-ADLNQLVPFKYKWAWDKYLTACANHWMPNEISMSAD 91 Query: 242 MDHWRNR--LTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAME 299 + W++ LTE ER + L FF+ +D +V NL R + PE R + Q E Sbjct: 92 VALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 151 Query: 300 NIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS------------- 346 +H+ Y +I++ D E +++R +P V RKA WA+ + S Sbjct: 152 ALHTHAYQYIIESLGLDEAEVFNMYR---EIPSVSRKAVWALPFTQSLGDETFHTGTPEN 208 Query: 347 DASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHL 405 D L+AF V EGIFF F I + +R M G + + I RDE +H +F + Sbjct: 209 DQRLLRDLIAFYVVFEGIFFYVGFTQILSMGRRNKMVGTSEQFQYILRDESMHMNFGIDV 268 Query: 406 YSMLPAEE------RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVA 459 + + E E I +IR+ VE E ++ D +P ++GMN ++ Y+ F+A Sbjct: 269 INQIKIENPHLWTPEFKNEMIQ-LIREGVELEYQYARDTMPHGILGMNAEMFEEYLHFIA 327 Query: 460 DRLLVELGY-DRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 +R L ++G D+ NPF WM E++ L+ + NFFE RV EYQ Sbjct: 328 NRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFFETRVIEYQ 371
ref|XP_138433.3| similar to ribonucleotide reductase [Mus musculus] (224 aa) Score: 154 bits (389), Expect: 6.79211e-36 Length: 144, Idn/Pos/Gap = 82/102/9 (56%/70%/6%) Query: 316 DPEERTHLFRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFW 374 +P+ H R + ++KA WA+RWIG +A++ ER+VAFAAVEGIFFSGSF +I W Sbjct: 61 EPDSDYHRQRPTSEVFFCQKKADWALRWIGDKEAAYGERVVAFAAVEGIFFSGSFASILW 120 Query: 375 LKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECE 431 LKKRGLMPGLTFSNELISRDEGLH DFAC ++ L P+E+RV +I AV E Sbjct: 121 LKKRGLMPGLTFSNELISRDEGLHWDFACLMFKHLAHKPSEQRV-----KEIITTAVRIE 175 Query: 432 KEFVCDALPVSLIGMNQQLMSAYI 455 +EF+ +ALPV LIGM+ LM YI Sbjct: 176 QEFLTEALPVKLIGMSCTLMKQYI 199
ref|NP_820537.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 493] gb|AAO91051.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella burnetii RSA 493] (401 aa) Score: 153 bits (387), Expect: 1.15856e-35 Length: 369, Idn/Pos/Gap = 110/178/35 (29%/48%/9%) Query: 164 ETFSP-----EIKEKGGTSAV---IVGLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIK 215 + FSP + +E GG + V GL+ E G R+R I AD L P K Sbjct: 28 KKFSPKNEKSDEEETGGGTTVQSGATGLEQLEMGAARIRVDDKKIINCH-ADLNQLVPFK 86 Query: 216 HPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLAFFAASDGIVLE 273 + ++ Y A+ W EI++ AD+ W+ N LT ER V L FF+ +D +V Sbjct: 87 YTWAWQKYLSGCANHWMPNEINMTADIALWKDPNGLTADERTIVKRSLGFFSTADSLVAN 146 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 NL R + PE R + Q E +H+ Y +I++ D E +++R +P V Sbjct: 147 NLVLAIYRHITNPECRQYLLRQAFEEALHTHAYQYIIESLGLDEAEVFNMYR---ELPAV 203 Query: 334 RRKAYWAIRWIGS--DASFQ-----------ERLVAFAAV-EGIFFSGSFCAIFWLKKRG 379 +KA WA+ + S D +F+ L+AF V EG+FF F I + +RG Sbjct: 204 SKKAVWALPYTQSLADPNFKTGTPEDDRRLLRDLIAFYVVFEGLFFYVGFTQILAMGRRG 263 Query: 380 LMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMIRDAVECEKEF 434 M G + + I RDE +H +F + + + E + + + MI + VE E ++ Sbjct: 264 KMTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQY 323 Query: 435 VCDALPVSLIGMNQQLMSAYIEFVADRLLVELGY-DRLWNTPNPFDWM-ELISLQGKTNF 492 D +P ++G+N + Y++++A+R ++G ++ N F WM E++ L+ + NF Sbjct: 324 AKDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNF 383 Query: 493 FEKRVGEYQ 501 FE RV EYQ Sbjct: 384 FETRVIEYQ 392
gb|AAN66801.1| ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440] ref|NP_743337.1| ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440] (416 aa) Score: 153 bits (386), Expect: 1.34631e-35 Length: 319, Idn/Pos/Gap = 99/156/26 (31%/48%/8%) Query: 206 ADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR--LTEAERYFVSHVLAF 263 AD L P K+ ++ Y A+ W +E+++ AD+ W+++ LTE ER V L F Sbjct: 93 ADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKSQDGLTEDERRIVMRNLGF 152 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 F+ +D +V NLA R + PE R + Q E IH+ Y I++ D E + Sbjct: 153 FSTADSLVANNLALAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIESLGMDEGE---I 209 Query: 324 FRAMETMPCVRRKAYWAIRW-------------IGSDASFQERLVAFAAV-EGIFFSGSF 369 F +P V +KA W +++ + +D L+A+ V EGIFF F Sbjct: 210 FNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKELLRNLIAYYCVLEGIFFYCGF 269 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMI 424 I + +R M G+ + I RDE +H +F + + + E + E MI Sbjct: 270 TQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMI 329 Query: 425 RDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-E 482 + E E+ D +P ++GMN +M Y++F+A+R L ++G + T NPF WM E Sbjct: 330 LQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSE 389 Query: 483 LISLQGKTNFFEKRVGEYQ 501 ++ L+ + NFFE RV EYQ Sbjct: 390 IMDLKKEKNFFETRVIEYQ 408
ref|XP_614415.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible), partial [Bos taurus] (123 aa) Score: 153 bits (386), Expect: 1.38043e-35 Length: 128, Idn/Pos/Gap = 76/92/8 (59%/71%/6%) Query: 396 GLHCDFACHLYSML---PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMS 452 GLHCDFAC ++ L P+EERV +I +AVE E+EF+ +ALPV LIGMN LM Sbjct: 1 GLHCDFACLMFQYLVNKPSEERV-----REIIVNAVEIEQEFLTEALPVGLIGMNCVLMK 55 Query: 453 AYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDN 512 YIEFVADRLL ELG+ +++ NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDN Sbjct: 56 QYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN 115 Query: 513 VFALDIEF 520 VF LD +F Sbjct: 116 VFTLDADF 123
ref|NP_249846.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PAO1] gb|AAG04544.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PAO1] ref|ZP_00138744.2| COG0208: Ribonucleotide reductase, beta subunit [Pseudomonas aeruginosa UCBPP-PA14] pir||A83502 ribonucleoside reductase, small chain PA1155 [imported] - Pseudomonas aeruginosa (strain PAO1) (415 aa) Score: 151 bits (381), Expect: 5.89561e-35 Length: 343, Idn/Pos/Gap = 105/163/27 (30%/47%/7%) Query: 182 GLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAAD 241 GLD E RV+ + A AD L P K+ ++ Y A+ W +E+++ AD Sbjct: 69 GLDDLEGSAARVQVGDKQMINAR-ADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNAD 127 Query: 242 MDHWRNR--LTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAME 299 + W+++ L+E ER V L FF+ +D +V NL R + PE R + Q E Sbjct: 128 IALWKSKDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEE 187 Query: 300 NIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS------------- 346 IH+ Y I++ D E +F +P V +KA W +++ S Sbjct: 188 AIHTHAYQYCIESLGMDEGE---IFNMYHEIPSVAKKASWGLKYTRSISDPMFQTGTPET 244 Query: 347 DASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHL 405 D F L+A+ V EGIFF F I + +R M G + I RDE +H +F + Sbjct: 245 DRQFLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLNFGIDV 304 Query: 406 YSMLPAE-----ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVAD 460 + + E + + MI + E E+ D +P ++GMN +M Y++F+A+ Sbjct: 305 INQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIAN 364 Query: 461 RLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 R L ++G + T NPF WM E++ L+ + NFFE RV EYQ Sbjct: 365 RRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQ 407
ref|ZP_00264440.1| COG0208: Ribonucleotide reductase, beta subunit [Pseudomonas fluorescens PfO-1] (416 aa) Score: 150 bits (380), Expect: 7.26306e-35 Length: 319, Idn/Pos/Gap = 99/155/26 (31%/48%/8%) Query: 206 ADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR--LTEAERYFVSHVLAF 263 AD L P K+ ++ Y A+ W +E+++ AD+ W+N LT+ ER V L F Sbjct: 93 ADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGF 152 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 F+ +D +V NLA R + PE R + Q E IH+ Y I++ D E + Sbjct: 153 FSTADSLVANNLALAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIESLGMDEGE---I 209 Query: 324 FRAMETMPCVRRKAYWAIRW-------------IGSDASFQERLVAFAAV-EGIFFSGSF 369 F +P V +KA W +++ + +D L+A+ V EGIFF F Sbjct: 210 FNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKELLRNLIAYYCVLEGIFFYCGF 269 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMI 424 I + +R M G+ + I RDE +H +F + + + E + E MI Sbjct: 270 TQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMI 329 Query: 425 RDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-E 482 + E E+ D +P ++GMN +M Y++F+A+R L ++G + T NPF WM E Sbjct: 330 LQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSE 389 Query: 483 LISLQGKTNFFEKRVGEYQ 501 ++ L+ + NFFE RV EYQ Sbjct: 390 IMDLKKEKNFFETRVIEYQ 408
ref|ZP_00126383.1| COG0208: Ribonucleotide reductase, beta subunit [Pseudomonas syringae pv. syringae B728a] (415 aa) Score: 150 bits (380), Expect: 7.82948e-35 Length: 319, Idn/Pos/Gap = 98/154/26 (30%/48%/8%) Query: 206 ADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR--LTEAERYFVSHVLAF 263 AD L P K+ ++ Y A+ W +E+++ AD+ W+N LT+ ER V L F Sbjct: 92 ADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGF 151 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 F+ +D +V NL R + PE R + Q E IH+ Y I++ D E + Sbjct: 152 FSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIESLAMDEGE---I 208 Query: 324 FRAMETMPCVRRKAYWAIRW-------------IGSDASFQERLVAFAAV-EGIFFSGSF 369 F +P V +KA W +++ + +D L+A+ V EGIFF F Sbjct: 209 FNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKELLRNLIAYYCVLEGIFFYCGF 268 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMI 424 I + +R M G+ + I RDE +H +F + + + E + E MI Sbjct: 269 TQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMI 328 Query: 425 RDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-E 482 + E E+ D +P ++GMN +M Y++F+A+R L ++G + T NPF WM E Sbjct: 329 LQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSE 388 Query: 483 LISLQGKTNFFEKRVGEYQ 501 ++ L+ + NFFE RV EYQ Sbjct: 389 IMDLKKEKNFFETRVIEYQ 407
ref|YP_045454.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter sp. ADP1] emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter sp. ADP1] (427 aa) Score: 150 bits (378), Expect: 1.08406e-34 Length: 348, Idn/Pos/Gap = 106/163/31 (30%/46%/8%) Query: 179 VIVGLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDL 238 + GL E G RV+ A+ AD L P K+ ++ Y A+ W +E+++ Sbjct: 79 ITAGLQEIETGAARVQVDDKAMINCR-ADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNM 137 Query: 239 AADMDHWR--NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQI 296 D+ W+ N LTE ER V L FF+ +D +V NL R + PE R + Q Sbjct: 138 NHDIALWKSENGLTEDERVIVKRNLGFFSTADSLVANNLVLAIYRLITNPECRQYILRQA 197 Query: 297 AMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS---------- 346 E IH+ Y I++ D E +F +P V RKA W +++ S Sbjct: 198 FEEAIHTHAYQYCIESLGMDEGE---IFNMYHEIPSVARKAAWGLKYTQSLSDPKFETGT 254 Query: 347 ---DASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 D L+AF V EGIFF F I + +R M G++ + I RDE +H +F Sbjct: 255 PETDQQLLRNLIAFYCVLEGIFFYCGFTQILSMGRRNKMNGVSEQFQYILRDESMHVNFG 314 Query: 403 CHLYSMLPAEERVP-------AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 + + + E P + + MI + E E+ D +P ++GMN +M Y+ Sbjct: 315 IDMINQIKIEN--PHLWTAEFQQEVIQMIVEGTLLEIEYARDTMPRGVLGMNAAMMEEYL 372 Query: 456 EFVADRLLVELGY-DRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 +F+ +R L +LG ++ NPF WM E++ L+ + NFFE RV +YQ Sbjct: 373 KFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFFETRVTDYQ 420
ref|ZP_00092565.1| COG0208: Ribonucleotide reductase, beta subunit [Azotobacter vinelandii] (416 aa) Score: 149 bits (377), Expect: 1.41583e-34 Length: 343, Idn/Pos/Gap = 106/161/27 (30%/46%/7%) Query: 182 GLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAAD 241 GL+ E RVR + AD L P K+ ++ Y A+ W +EI++ AD Sbjct: 70 GLEDLEGAAARVRVDEKRMINCR-ADLNQLVPFKYDWAWQKYLDGCANHWMPQEINMNAD 128 Query: 242 MDHWRNR--LTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAME 299 + W++ LTE ER + L FF+ +D +V NLA R + PE R + Q E Sbjct: 129 IALWKSADGLTEDERRIIKRNLGFFSTADSLVANNLALAIYRLITNPECRQYILRQAFEE 188 Query: 300 NIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS------------- 346 IH+ Y I++ D E +F +P V +KA W +++ S Sbjct: 189 AIHTHAYQYCIESLGMDEGE---IFNMYHEIPSVAKKASWGLKYTRSISDPTFDTGTPET 245 Query: 347 DASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHL 405 D L+A+ V EGIFF F I + +R M G + I RDE +H +F + Sbjct: 246 DRQLLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLNFGIDM 305 Query: 406 YSMLPAE-----ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVAD 460 + + E + + MI + E E+ D +P ++GMN +M Y++F+A+ Sbjct: 306 INQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGMNATMMEDYLKFIAN 365 Query: 461 RLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 R L +LG + T NPF WM E++ L+ + NFFE RV EYQ Sbjct: 366 RRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQ 408
gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus capsulatus str. Bath] ref|YP_114081.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus capsulatus str. Bath] (403 aa) Score: 149 bits (377), Expect: 1.55193e-34 Length: 368, Idn/Pos/Gap = 106/172/34 (28%/46%/9%) Query: 158 EDIAFGETFSPEIKEKGGTSAVIVGLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHP 217 E +A G + G T GL+ E G R++ I AD L P K+ Sbjct: 38 EPLATGARLDSIVPATGAT-----GLENIEMGARRIQVDDKRIINCR-ADLNQLVPFKYQ 91 Query: 218 KIFEFYKRHVASFWTAEEIDLAADMDHWRNR--LTEAERYFVSHVLAFFAASDGIVLENL 275 ++ Y A+ W +EI++ AD+ W++ LT ER + L FF+ +D +V NL Sbjct: 92 WAWQKYLDACANHWMPQEINMNADIALWKSADGLTPDERIIIKRNLGFFSTADSLVANNL 151 Query: 276 AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRR 335 R + PE R + Q E +H+ Y ++++ D E +++R + P V R Sbjct: 152 VLAVYRHITNPECRQYLLRQAFEEALHTHAYQYVVESLGLDEGEVFNMYREV---PAVAR 208 Query: 336 KAYWAIRWIG-------------SDASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLM 381 KA WA+ + +D L+AF + EGIFF F I + +R M Sbjct: 209 KAEWALPFTQYLADPYFKTGTPENDQKLLRELIAFYVIFEGIFFYVGFTQILSMGRRNKM 268 Query: 382 PGLTFSNELISRDEGLHCDFACHLYSMLPAE------ERVPAERIHSMIRDAVECEKEFV 435 G + I RDE +H +F + + + E + E + MIR+AV+ E ++ Sbjct: 269 TGTAEQFQYIMRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQ-MIREAVDIETQYA 327 Query: 436 CDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFF 493 D +P ++G+N + Y++F+A+R ++G + NPF WM E++ L+ + NFF Sbjct: 328 YDTMPRGILGLNAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 387 Query: 494 EKRVGEYQ 501 E RV EYQ Sbjct: 388 ETRVTEYQ 395
ref|NP_791486.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] (415 aa) Score: 149 bits (375), Expect: 2.80641e-34 Length: 319, Idn/Pos/Gap = 97/154/26 (30%/48%/8%) Query: 206 ADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR--LTEAERYFVSHVLAF 263 AD L P K+ ++ Y A+ W +E+++ AD+ W++ LT+ ER V L F Sbjct: 92 ADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKDPEGLTDDERRIVMRNLGF 151 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 F+ +D +V NL R + PE R + Q E IH+ Y I++ D E + Sbjct: 152 FSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIESLAMDEGE---I 208 Query: 324 FRAMETMPCVRRKAYWAIRW-------------IGSDASFQERLVAFAAV-EGIFFSGSF 369 F +P V +KA W +++ + +D L+A+ V EGIFF F Sbjct: 209 FNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKELLRNLIAYYCVLEGIFFYCGF 268 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMI 424 I + +R M G+ + I RDE +H +F + + + E + E MI Sbjct: 269 TQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMI 328 Query: 425 RDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-E 482 + E E+ D +P ++GMN +M Y++F+A+R L ++G + T NPF WM E Sbjct: 329 LQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSE 388 Query: 483 LISLQGKTNFFEKRVGEYQ 501 ++ L+ + NFFE RV EYQ Sbjct: 389 IMDLKKEKNFFETRVIEYQ 407
ref|NP_680371.1| ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative [Arabidopsis thaliana] (231 aa) Score: 148 bits (374), Expect: 3.15414e-34 Length: 98, Idn/Pos/Gap = 67/81/0 (68%/82%/0%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 DR+ +FPI++P+I+E YK+ ASFWTAEE+DL+ D W N LT ER+F+ HVLAFFAA Sbjct: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAA 74 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSE 304 SDGIVLENL+ RFM DV+I EAR FYGFQIA+ENIHSE Sbjct: 75 SDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112 Score: 139 bits (351), Expect: 1.78999e-31 Length: 124, Idn/Pos/Gap = 69/91/7 (55%/73%/5%) Query: 404 HLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLL 463 +++S + + +R+ +++ DAVE E+EFVCDAL +L+GMN++LMS YIEFVADRLL Sbjct: 108 NIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFVADRLL 167 Query: 464 VELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSA-------TDNVFAL 516 LG +++ NPFDWMELISLQGKTNFFEKRVGEYQKA+V +S D+VF L Sbjct: 168 AALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSVHGNAAFNDDHVFKL 227 Query: 517 DIEF 520 D +F Sbjct: 228 DEDF 231
ref|ZP_00195366.2| COG0208: Ribonucleotide reductase, beta subunit [Mesorhizobium sp. BNC1] (369 aa) Score: 147 bits (372), Expect: 5.84832e-34 Length: 358, Idn/Pos/Gap = 112/167/32 (31%/46%/8%) Query: 167 SPEIKEKGGTSAVIVGLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRH 226 SP E T GL ERG RV + A AD L P+K+ +E Y Sbjct: 13 SPSAGETDAT-----GLGTIERGAGRVSVDDKRMINAR-ADVNQLLPLKYRWAWEKYLSG 66 Query: 227 VASFWTAEEIDLAADMDHWRNR--LTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVE 284 + W E+ + AD+ W++R LTE ER V L FFAAS+ +V N+ R + Sbjct: 67 CNNHWMPTEVSMQADIALWKSRDGLTEDERRMVKRNLGFFAASESLVANNIVLAIYRHLT 126 Query: 285 IPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWI 344 PE R + Q E +H+ T+ ++++ D E LF +P + KA WA+ + Sbjct: 127 NPECRQYLLRQAFEEAVHTHTFQYIVESLGLDEGE---LFNMYREVPSITDKAAWALEYT 183 Query: 345 -------------GSDASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 390 +D +F LVAF + EG++F F I L +R M G+ + Sbjct: 184 RHLDDPNFRTGTPEADQAFLRDLVAFYVIFEGMWFYTGFAQILSLGRRNKMVGIAEQYQY 243 Query: 391 ISRDEGLHCDFACHLYSMLPAEER---VP--AERIHSMIRDAVECEKEFVCDALPVSLIG 445 I RDE +H +F + + + E P E + M++DA E E + D +P +G Sbjct: 244 ILRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYGRDTMPRGFLG 303 Query: 446 MNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 +N Y+ F+A+R +LG ++ T NPF WM E + L+ + NFFE RV EYQ Sbjct: 304 LNAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFFETRVIEYQ 361
gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium violaceum ATCC 12472] ref|NP_901954.1| ribonucleoside-diphosphate reductase system [Chromobacterium violaceum ATCC 12472] (360 aa) Score: 147 bits (370), Expect: 1.05757e-33 Length: 318, Idn/Pos/Gap = 97/152/27 (30%/47%/8%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRN-RLTEAERYFVSHVLAFFA 265 D L P KH +E Y A+ W +E+++ D++ W+ +LTE E V L FF Sbjct: 39 DVNQLVPFKHKWAWEKYLAQCANHWMPQEVNMQRDIEQWKTGQLTEDEMRIVKRNLGFFV 98 Query: 266 ASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFR 325 +D + N+ R + PE R F Q E IH+ Y ++++ D E +F Sbjct: 99 TADSLAANNIVLGTYRQITSPECRQFLLRQAFDEAIHTHAYQYIVESLGLDEGE---VFN 155 Query: 326 AMETMPCVRRKAYWAIRWIG-------------SDASFQERLVAFAAV-EGIFFSGSFCA 371 A + +R K + I +I +D + L+ FA + EG+FF F Sbjct: 156 AYHEVKSIRDKDEFLIPFIDVLCNPEFKTGTVENDQKLLKSLIVFACIMEGLFFYVGFVQ 215 Query: 372 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE------ERVPAERIHSMIR 425 I L ++ M G + I RDE +HC+F L + + E + AE I + + Sbjct: 216 ILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINTIKLENPLLWTDSFKAE-IVDLFK 274 Query: 426 DAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-EL 483 AVE E + D +P ++G+N + Y+ F+A+R + ++G D L+ NPF WM E+ Sbjct: 275 QAVELEYAYAEDTMPRGVLGLNASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEM 334 Query: 484 ISLQGKTNFFEKRVGEYQ 501 I L+ + NFFE RV EYQ Sbjct: 335 IDLKKEKNFFETRVTEYQ 352
ref|NP_886054.1| ribonucleoside-diphosphate reductase beta chain [Bordetella parapertussis 12822] emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella bronchiseptica RB50] emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella parapertussis] emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella pertussis Tohama I] ref|NP_881560.1| ribonucleoside-diphosphate reductase beta chain [Bordetella pertussis Tohama I] ref|NP_890911.1| ribonucleoside-diphosphate reductase beta chain [Bordetella bronchiseptica RB50] (398 aa) Score: 146 bits (368), Expect: 1.7016e-33 Length: 320, Idn/Pos/Gap = 101/153/26 (31%/47%/8%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR--LTEAERYFVSHVLA 262 E D L P K+ +E Y A+ W +EI+++ D+ W+N LTE ER V L Sbjct: 74 ETDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNPNGLTEDERRIVKRNLG 133 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FF +D + N+ R + PE R F Q E IH+ Y ++++ D E Sbjct: 134 FFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLDLDEAE--- 190 Query: 323 LFRAMETMPCVRRKAYWAIRWIG-------------SDASFQERLVAFAAV-EGIFFSGS 368 +F A +P +R K + I +I +D + L+ FA + EG+FF Sbjct: 191 IFNAYNEVPSIRAKDEFLIPFIDAIADPNFHTGTPEADQKLLKSLIVFACLMEGLFFYVG 250 Query: 369 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER---VPA--ERIHSM 423 F I L ++ M G I RDE +HC+F L + + E P E I + Sbjct: 251 FTQILALGRQNKMTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTPEFREEIREL 310 Query: 424 IRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM- 481 R AVE E + D +P ++G+N + +Y+ F+A+R ++G + L+ NPF WM Sbjct: 311 FRKAVELEYAYAEDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMA 370 Query: 482 ELISLQGKTNFFEKRVGEYQ 501 E+I L+ + NFFE RV EYQ Sbjct: 371 EMIDLKKERNFFETRVIEYQ 390
ref|ZP_00277731.1| COG0208: Ribonucleotide reductase, beta subunit [Burkholderia fungorum LB400] (351 aa) Score: 146 bits (368), Expect: 1.91244e-33 Length: 326, Idn/Pos/Gap = 100/155/26 (30%/47%/7%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLA 262 + D L P K+ +E Y A+ W +E++++ D+ W+ N LTE ER V L Sbjct: 27 QTDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLG 86 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FF +D + N+ R + PE R F Q E IH+ Y ++++ D E Sbjct: 87 FFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGE--- 143 Query: 323 LFRAMETMPCVRRKAYWAIRWIG-------------SDASFQERLVAFAAV-EGIFFSGS 368 +F A + +R K + I +I +D + L+ FA V EG+FF Sbjct: 144 IFNAYHEVSSIRAKDEFLIPYIHVLTDPAFKTGTLEADQTLLRSLIVFACVMEGLFFYVG 203 Query: 369 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE--ERVPAE---RIHSM 423 F I L ++ M G + I RDE +HC+F L + + E + AE I + Sbjct: 204 FTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREI 263 Query: 424 IRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM- 481 + AVE E + D +P ++G+N + +Y+ F+ +R ++G D L+ N NPF WM Sbjct: 264 FQQAVELEYRYAEDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMS 323 Query: 482 ELISLQGKTNFFEKRVGEYQKANVTT 507 E+I L+ + NFFE RV EYQ T Sbjct: 324 EMIDLKKERNFFETRVIEYQTGGALT 349
ref|YP_109585.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia pseudomallei K96243] ref|YP_104055.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei ATCC 23344] emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia pseudomallei K96243] gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia mallei ATCC 23344] (350 aa) Score: 145 bits (367), Expect: 2.02747e-33 Length: 321, Idn/Pos/Gap = 99/155/28 (30%/48%/8%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLA 262 + D L P K+ +E Y A+ W +EI+++ D+ W+ N LTE ER V L Sbjct: 26 KTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLG 85 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FF +D + N+ R + PE R F Q E IH+ Y ++++ D E Sbjct: 86 FFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGE--- 142 Query: 323 LFRAMETMPCVRRKAYWAIRWIGS-------------DASFQERLVAFAAV-EGIFFSGS 368 +F A +P +R K + I +I + D + L+ FA + EG+FF Sbjct: 143 IFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLEADQKLLKSLIVFACIMEGLFFYVG 202 Query: 369 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RVPAERIHS 422 F I L ++ M G + I RDE +HC+F L + + E AE I Sbjct: 203 FTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAE-IRE 261 Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM 481 + + AV+ E + D +P ++G+N + +Y+ F+++R ++G D L+ N NPF WM Sbjct: 262 LFKHAVDLEYRYAEDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWM 321 Query: 482 -ELISLQGKTNFFEKRVGEYQ 501 E+I L+ + NFFE RV EYQ Sbjct: 322 SEMIDLKKERNFFETRVIEYQ 342
emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718] ref|NP_842416.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718] (382 aa) Score: 145 bits (366), Expect: 3.02614e-33 Length: 326, Idn/Pos/Gap = 101/158/26 (30%/48%/7%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLA 262 +AD L P K+ +E Y A+ W +EI++ D+ W+ N LTE ER V L Sbjct: 58 KADVNQLVPFKYKWAWEKYLSACANHWMPQEINMTRDIALWKDPNGLTEDERRIVKRNLG 117 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FF +D + N+ R + PE R + Q E IH+ Y ++++ D E Sbjct: 118 FFVTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAYQYIVESIGLDEGE--- 174 Query: 323 LFRAMETMPCVRRKAYWAIRWIG--SDASFQ-----------ERLVAFAAV-EGIFFSGS 368 +F A + +R K + I +I +D SF+ + L+ FA + EG+FF Sbjct: 175 IFNAYHEIGSIRDKDEFLIPFIDTLTDPSFRTGTLETDQQLLKSLIVFACIMEGLFFYVG 234 Query: 369 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSM 423 F I L ++ M G + I RDE +HC+F + + + E R E I ++ Sbjct: 235 FVQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDVINQIKLENPHLWTREFREEISAL 294 Query: 424 IRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM- 481 +R AVE E + D +P ++G+N + Y+ F+ +R ++G D L+ NPF WM Sbjct: 295 MRKAVELEYRYAEDTMPRGVLGLNAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMS 354 Query: 482 ELISLQGKTNFFEKRVGEYQKANVTT 507 E+I L+ + NFFE RV EYQ V + Sbjct: 355 EMIDLKKEKNFFETRVIEYQTGGVLS 380
ref|ZP_00216567.1| COG0208: Ribonucleotide reductase, beta subunit [Burkholderia cepacia R18194] (352 aa) Score: 145 bits (365), Expect: 3.40111e-33 Length: 321, Idn/Pos/Gap = 99/154/28 (30%/47%/8%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLA 262 + D L P K+ +E Y A+ W +EI+++ D+ W+ N LTE ER V L Sbjct: 28 QTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLG 87 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FF +D + N+ R + PE R F Q E IH+ Y ++++ D E Sbjct: 88 FFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGE--- 144 Query: 323 LFRAMETMPCVRRKAYWAIRWIGS-------------DASFQERLVAFAAV-EGIFFSGS 368 +F A + +R K + I +I + D + L+ FA + EG+FF Sbjct: 145 IFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFACIMEGLFFYVG 204 Query: 369 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RVPAERIHS 422 F I L ++ M G + I RDE +HC+F L + + E AE I Sbjct: 205 FTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAE-IRE 263 Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM 481 + + AVE E + D +P ++G+N + +Y+ F+++R ++G D L+ N NPF WM Sbjct: 264 LFKQAVELEYRYAEDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWM 323 Query: 482 -ELISLQGKTNFFEKRVGEYQ 501 E+I L+ + NFFE RV EYQ Sbjct: 324 SEMIDLKKERNFFETRVIEYQ 344
ref|ZP_00221438.1| COG0208: Ribonucleotide reductase, beta subunit [Burkholderia cepacia R1808] (376 aa) Score: 145 bits (365), Expect: 4.01877e-33 Length: 321, Idn/Pos/Gap = 99/154/28 (30%/47%/8%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLA 262 + D L P K+ +E Y A+ W +EI+++ D+ W+ N LTE ER V L Sbjct: 52 QTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLG 111 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FF +D + N+ R + PE R F Q E IH+ Y ++++ D E Sbjct: 112 FFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGE--- 168 Query: 323 LFRAMETMPCVRRKAYWAIRWIGS-------------DASFQERLVAFAAV-EGIFFSGS 368 +F A + +R K + I +I + D + L+ FA + EG+FF Sbjct: 169 IFNAYHEVASIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFACIMEGLFFYVG 228 Query: 369 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RVPAERIHS 422 F I L ++ M G + I RDE +HC+F L + + E AE I Sbjct: 229 FTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAE-IRE 287 Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM 481 + + AVE E + D +P ++G+N + +Y+ F+++R ++G D L+ N NPF WM Sbjct: 288 LFKHAVELEYRYAEDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWM 347 Query: 482 -ELISLQGKTNFFEKRVGEYQ 501 E+I L+ + NFFE RV EYQ Sbjct: 348 SEMIDLKKERNFFETRVIEYQ 368
ref|ZP_00243100.1| COG0208: Ribonucleotide reductase, beta subunit [Rubrivivax gelatinosus PM1] (358 aa) Score: 145 bits (365), Expect: 4.29618e-33 Length: 321, Idn/Pos/Gap = 96/155/28 (29%/48%/8%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLA 262 + D L P K+ +E Y A+ W +E++++ D+ W+ N L+E ER + L Sbjct: 34 QTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMSRDIATWKDPNGLSEDERRIIKRNLG 93 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FF +D + N+ R + PE R F Q E IH+ Y ++++ D E Sbjct: 94 FFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDESE--- 150 Query: 323 LFRAMETMPCVRRKAYWAIRWIGS-------------DASFQERLVAFAAV-EGIFFSGS 368 +F A + +R K + I +IG+ D + + L+ FA + EG+FF Sbjct: 151 IFNAYNEVQSIRDKDEFLIPFIGAIMDPNFHTGTLENDRTLLKSLIVFACLMEGLFFYVG 210 Query: 369 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RVPAERIHS 422 F I L ++ M G + I RDE +HC+F L + + E AE I + Sbjct: 211 FTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFKAE-IKA 269 Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM 481 + AVE E + D +P ++G+N + Y+ ++A+R ++G + L+ N NPF WM Sbjct: 270 LFMKAVELEYRYAEDTMPRGVLGLNASMFKGYLRYIANRRATQIGLEELFPNEENPFPWM 329 Query: 482 -ELISLQGKTNFFEKRVGEYQ 501 E+I L+ + NFFE RV EYQ Sbjct: 330 SEMIDLKKERNFFETRVIEYQ 350
ref|ZP_00317467.1| COG0208: Ribonucleotide reductase, beta subunit [Microbulbifer degradans 2-40] (423 aa) Score: 144 bits (363), Expect: 7.32817e-33 Length: 345, Idn/Pos/Gap = 104/165/29 (30%/47%/8%) Query: 181 VGLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAA 240 +GL+ E G R+ + AD L P K+ ++ Y A+ W +E+++ A Sbjct: 76 LGLEELEIGAERIEVDDKRMINCR-ADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 134 Query: 241 DMDHWR--NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAM 298 D+ W+ + L+E ER + L +F+ +D +V NL R + PEAR + Q Sbjct: 135 DVATWKSPDGLSEDERRIIMRSLGYFSTADSLVANNLVLAIYRHITNPEARQYLLRQAFE 194 Query: 299 ENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIG--SDASFQ----- 351 E IH+ Y I++ D E +++R +P V +KA W+I SD +F+ Sbjct: 195 EAIHTHAYQYCIESLGMDEGEVFNMYR---EVPSVAKKAAWSIAHTQGMSDPTFKTGTPE 251 Query: 352 ------ERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACH 404 L+ F + EGIFF F I + +R M G+ + I RDE +H +F Sbjct: 252 ADQELLRNLIGFYVITEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFGID 311 Query: 405 LYSMLPAE------ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFV 458 + + + E E AE MI + E E + D +P ++GMN +M Y+ F+ Sbjct: 312 VINQIKLENPHLWTEEFQAE-TKQMILEGTELEIAYARDTMPRGVLGMNAAMMEEYLHFI 370 Query: 459 ADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 A+R + +LG + NPF WM E++ L+ + NFFE RV EYQ Sbjct: 371 ANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFFETRVIEYQ 415
ref|ZP_00168768.2| COG0208: Ribonucleotide reductase, beta subunit [Ralstonia eutropha JMP134] (394 aa) Score: 142 bits (359), Expect: 1.75986e-32 Length: 319, Idn/Pos/Gap = 97/156/28 (30%/48%/8%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLAFF 264 D L P K+ +E Y A+ W +EI+++ D+ W+ N LTE ER + L FF Sbjct: 72 DVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIATWKDPNGLTEDERRIIKRNLGFF 131 Query: 265 AASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLF 324 +D + N+ R + PE R + Q E IH+ Y ++++ + E +F Sbjct: 132 VTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLNEAE---IF 188 Query: 325 RAMETMPCVRRKAYWAIRWIG--SDASFQ-----------ERLVAFAAV-EGIFFSGSFC 370 A + +R K + I +I +D SF+ + L+ FA + EG+FF F Sbjct: 189 NAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFACIMEGLFFYVGFT 248 Query: 371 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RVPAERIHSMI 424 I + ++ M G + I RDE LHC+F L + + E AE I + Sbjct: 249 QILAMGRQNKMTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAE-ITELF 307 Query: 425 RDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-E 482 + AV+ E + D +P ++G+N + +Y+ F+ +R ++G D+L+ N NPF WM E Sbjct: 308 KKAVDLEYRYAEDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSE 367 Query: 483 LISLQGKTNFFEKRVGEYQ 501 +I L+ + NFFE RV EYQ Sbjct: 368 MIDLKKERNFFETRVIEYQ 386
ref|ZP_00334241.1| COG0208: Ribonucleotide reductase, beta subunit [Thiobacillus denitrificans ATCC 25259] (376 aa) Score: 142 bits (358), Expect: 2.24163e-32 Length: 335, Idn/Pos/Gap = 99/157/29 (29%/46%/8%) Query: 191 TRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRN--R 248 TRVR+ + D L P K+ +E Y A+ W +E++++ D+ W++ Sbjct: 39 TRVRASDKRVINGA-TDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIAQWKDPTA 97 Query: 249 LTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSL 308 LTE ER V L FF +D + N+ R + PE R + Q E IH+ Y Sbjct: 98 LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQY 157 Query: 309 LIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS-------------DASFQERLV 355 ++++ D E +F A + +R K + I +I + D + L+ Sbjct: 158 IVESLGLDEAE---IFNAYHEIESIRDKDDFLIPFIDTLTNPEFKTGTPENDQKLLKSLI 214 Query: 356 AFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-- 412 FA + EGIFF F I L ++ M G + I RDE +HC+F L + + E Sbjct: 215 VFACIMEGIFFYVGFVQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINTIKQENP 274 Query: 413 ----ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGY 468 AE I ++I+ VE E + D +P ++G+N Y+ F+++R ++G Sbjct: 275 HLWTSEFKAE-IRTLIQKGVELEFRYAEDTMPRGVLGLNSAQFKEYLRFISNRRCQQIGL 333 Query: 469 DRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 D ++ NPF WM E+I L+ + NFFE RV EYQ Sbjct: 334 DEMFPGVSNPFPWMAEMIDLKKEKNFFETRVTEYQ 368
ref|ZP_00271976.1| COG0208: Ribonucleotide reductase, beta subunit [Ralstonia metallidurans CH34] (395 aa) Score: 142 bits (357), Expect: 2.90333e-32 Length: 319, Idn/Pos/Gap = 97/155/28 (30%/48%/8%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLAFF 264 D L P K+ +E Y A+ W +EI+++ D+ W+ N LTE ER + L FF Sbjct: 73 DVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIIKRNLGFF 132 Query: 265 AASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLF 324 +D + N+ R + PE R + Q E IH+ Y ++++ + E +F Sbjct: 133 VTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLNEAE---IF 189 Query: 325 RAMETMPCVRRKAYWAIRWIG--SDASFQ-----------ERLVAFAAV-EGIFFSGSFC 370 A + +R K + I +I +D SF+ + L+ FA + EG+FF F Sbjct: 190 NAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFACIMEGLFFYVGFT 249 Query: 371 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RVPAERIHSMI 424 I + ++ M G + I RDE LHC+F L + + E AE I + Sbjct: 250 QILAMGRQNKMTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAE-ITELF 308 Query: 425 RDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-E 482 + AV+ E + D +P ++G+N + Y+ F+ +R ++G D+L+ N NPF WM E Sbjct: 309 KKAVDLEYRYAEDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSE 368 Query: 483 LISLQGKTNFFEKRVGEYQ 501 +I L+ + NFFE RV EYQ Sbjct: 369 MIDLKKERNFFETRVIEYQ 387
emb|CAD16511.1| PUTATIVE TRANSMEMBRANE RIBONUCLEOSIDE REDUCTASE (SMALL CHAIN) OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum] ref|NP_520925.1| PUTATIVE TRANSMEMBRANE RIBONUCLEOSIDE REDUCTASE (SMALL CHAIN) OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum GMI1000] (400 aa) Score: 141 bits (356), Expect: 4.82991e-32 Length: 319, Idn/Pos/Gap = 97/154/28 (30%/48%/8%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLAFF 264 D L P K+ +E Y A+ W +EI+++ D+ W+ N LTE ER + L FF Sbjct: 78 DVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDERRIIKRNLGFF 137 Query: 265 AASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLF 324 +D + N+ R + PE R + Q E IH+ Y ++++ + E +F Sbjct: 138 VTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLNEAE---IF 194 Query: 325 RAMETMPCVRRKAYWAIRWIG--SDASFQ-----------ERLVAFAAV-EGIFFSGSFC 370 A + +R K + I +I +D SF+ + L+ FA + EG+FF F Sbjct: 195 NAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFACIMEGLFFYVGFT 254 Query: 371 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RVPAERIHSMI 424 I + ++ M G + I RDE LHC+F L + + E AE I + Sbjct: 255 QILAMGRQNKMTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAE-ITELF 313 Query: 425 RDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-E 482 + AV+ E + D +P ++G+N + Y+ F+ +R ++G D L+ N NPF WM E Sbjct: 314 KKAVDLEYRYAEDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSE 373 Query: 483 LISLQGKTNFFEKRVGEYQ 501 +I L+ + NFFE RV EYQ Sbjct: 374 MIDLKKERNFFETRVIEYQ 392
ref|ZP_00364506.1| COG0208: Ribonucleotide reductase, beta subunit [Polaromonas sp. JS666] (406 aa) Score: 140 bits (354), Expect: 8.10224e-32 Length: 321, Idn/Pos/Gap = 97/152/28 (30%/47%/8%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR--NRLTEAERYFVSHVLA 262 + D L P K+ +E Y A+ W +E+++ D+ W+ N LTE ER V L Sbjct: 82 QTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGLTEDERRLVKRNLG 141 Query: 263 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 322 FF +D + N+ R + PE R F Q E IH+ Y + ++ D E Sbjct: 142 FFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYITESLGLDEAE--- 198 Query: 323 LFRAMETMPCVRRKAYWAIRWI-------------GSDASFQERLVAFAAV-EGIFFSGS 368 +F A + ++ K + I +I +D + + L+ FA + EG+FF Sbjct: 199 IFNAYNEVQSIKDKDQFLIPFIEVISDPHFKTGTTEADQTLLKSLIVFACLMEGLFFYVG 258 Query: 369 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE------RVPAERIHS 422 F I L ++ M G + I RDE +HC+F L + L E AE I + Sbjct: 259 FTQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKAE-IKA 317 Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM 481 + AVE E + D +P ++G+N + Y+ ++A+R ++G + L+ N NPF WM Sbjct: 318 LFLKAVELEYRYAEDTMPRGVLGLNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWM 377 Query: 482 -ELISLQGKTNFFEKRVGEYQ 501 E+I L+ + NFFE RV EYQ Sbjct: 378 SEMIDLKKERNFFETRVIEYQ 398
ref|ZP_00293267.1| COG0208: Ribonucleotide reductase, beta subunit [Thermobifida fusca] (354 aa) Score: 140 bits (352), Expect: 1.13123e-31 Length: 352, Idn/Pos/Gap = 101/165/27 (28%/46%/7%) Query: 176 TSAVIVGLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEE 235 T+ GL + G RV + + AD L P+K+ +E Y + W E Sbjct: 2 TTVNTTGLGEIQSGAARVDVEDKRMINSR-ADVNQLLPLKYRWAWEKYLAACNNHWMPTE 60 Query: 236 IDLAADMDHWRNR--LTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYG 293 + + AD+ W+++ LTE ER V L FFA ++ +V N+ R + PE R + Sbjct: 61 VSMQADIALWKSKDGLTEDERLMVKRNLGFFATAESLVANNIVLAVYRHLTNPECRQYLL 120 Query: 294 FQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWI--------- 344 Q E +H+ T+ + ++ D E LF +P + K WA+R+ Sbjct: 121 RQAFEEAVHTHTFQYICESLGLDEGE---LFNMYREVPSITAKDAWALRYTRNLENPNFT 177 Query: 345 ----GSDASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC 399 +D +F LVAF V EG++F F I L +R M G+ + I RDE +H Sbjct: 178 TGTPEADQAFLRDLVAFYVVLEGMWFYTGFAQILSLGRRNKMVGIAEQYQYILRDESIHL 237 Query: 400 DFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAY 454 +F + + + E + + +M+ +A E E + + +P ++G+N +L Y Sbjct: 238 NFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYGRETMPRGILGLNAKLCEQY 297 Query: 455 IEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQKAN 504 + F+ DR +LG ++ T NPF WM E++ L+ + NFFE RV EYQ + Sbjct: 298 MRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFFETRVIEYQTGS 349
ref|NP_220349.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis D/UW-3/CX] gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis D/UW-3/CX] sp|O84835|RIR2_CHLTR Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide Reductase From Chlamydia Trachomatis (346 aa) Score: 139 bits (350), Expect: 2.28001e-31 Length: 346, Idn/Pos/Gap = 101/165/27 (29%/47%/7%) Query: 183 LDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADM 242 LDG ++ RV + + + D L PIK+ +E Y A+ W EI + D+ Sbjct: 6 LDGKQK---RVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDI 62 Query: 243 DHWR-NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENI 301 + W+ +RL+E ER + L FF+ ++ +V N+ + V PEAR + Q E + Sbjct: 63 ELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAV 122 Query: 302 HSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS--DASFQ-------- 351 H+ T+ + ++ D +E +F A ++ K + + G D +F+ Sbjct: 123 HTHTFLYICESLGLDEKE---IFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQ 179 Query: 352 ---ERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYS 407 + LV + + EGIFF F I ++ M G+ + I RDE +H +F L + Sbjct: 180 EFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLIN 239 Query: 408 MLPAEER---VP--AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRL 462 + E P + I +I+ AV+ E E+ D LP ++G+ + Y++ +ADR Sbjct: 240 GIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRR 299 Query: 463 LVELGYDRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQKANVTT 507 L +G +++T NPF WM E I L + NFFE RV EYQ A T Sbjct: 300 LERIGLKPIYHTKNPFPWMSETIDLNKEKNFFETRVIEYQHAASLT 345
ref|NP_954907.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5] gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5] (315 aa) Score: 139 bits (350), Expect: 2.31838e-31 Length: 290, Idn/Pos/Gap = 98/148/11 (33%/51%/3%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LE 273 P I VA+ W E LA D RL+ AE F + AF +A+D +V L Sbjct: 23 PDIDHLRSLSVANRWLETEFPLADDAKD-VARLSGAELEFYRFLFAFLSAADDLVNVNLG 81 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPC 332 NL+E F + + +Y Q ++E +HS YS + + + D R + P Sbjct: 82 NLSELFTQK----DILHYYIEQESIEVVHSRVYSAIQLLLFKNDAVARAGYVEDALSDPA 137 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 VRRK W R + + S E+ V +EGIFFS SF AI +L+ L +N+LIS Sbjct: 138 VRRKVDWLERRVAAAESVAEKYVLMILIEGIFFSSSFAAIAYLRTHNLFVVTCQTNDLIS 197 Query: 393 RDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMS 452 RDE +H +C +++ ER P +R+ + R+AVE E+EF+ P ++ + +S Sbjct: 198 RDEAVHTTASCCIFNNYLGGERPPPDRVRKLFREAVEIEREFIWSRAPRGSHILDVEAIS 257 Query: 453 AYIEFVADRLLVELGYDRLWNTPNP-FDW-MELISLQGKTNFFEKRVGEY 500 AY+E+ ADRLL + L+ TP P D+ + L++ + TNFFE+R Y Sbjct: 258 AYVEYSADRLLAAIHLPPLFGTPPPGTDFPLALMTAEKHTNFFERRSTTY 307
emb|CAB70099.1| ribonucleotide reductase R2 subunit [Plasmodium yoelii] (111 aa) Score: 139 bits (349), Expect: 2.41714e-31 Length: 111, Idn/Pos/Gap = 65/82/0 (58%/73%/0%) Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPC 332 ENLA +F+R+VEI EA+ FY FQIA+ENIHSETYSLLID Y+KD +ER +LF A+E +P Sbjct: 1 ENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPA 60 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 ++ KA WA +WI SF ER+VA A VEGI +SGSF F KK+ + G Sbjct: 61 IKNKALWAAKWINDTNSFAERIVANACVEGILYSGSFLQFFGFKKQNKLHG 111
gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia muridarum Nigg] ref|NP_296594.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia muridarum Nigg] pir||G81728 ribonucleoside-diphosphate reductase, beta chain TC0215 [imported] - Chlamydia muridarum (strain Nigg) sp|Q9PL92|RIR2_CHLMU Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (346 aa) Score: 138 bits (347), Expect: 4.1924e-31 Length: 346, Idn/Pos/Gap = 100/163/27 (28%/47%/7%) Query: 183 LDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADM 242 LDG ++ RV + + + D L PIK+ +E Y A+ W EI + D+ Sbjct: 6 LDGKQK---RVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEISMGKDI 62 Query: 243 DHWR-NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENI 301 + W+ N L+E ER + L FF+ ++ +V N+ + V PEAR + Q E + Sbjct: 63 ELWKSNVLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAV 122 Query: 302 HSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS--DASFQ-------- 351 H+ T+ + ++ D +E +F A ++ K + + G D +F+ Sbjct: 123 HTHTFLYICESLGLDEKE---IFNAYNERASIKAKDDFQMEITGKVLDPNFRTDSVEGLQ 179 Query: 352 ---ERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYS 407 + LV + + EGIFF F I ++ M G+ + I RDE +H +F L + Sbjct: 180 EFIKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMVGIGEQYQYILRDETIHLNFGVDLIN 239 Query: 408 MLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRL 462 + E + I MI+ AV+ E ++ D LP ++G+ + Y++ +ADR Sbjct: 240 GIKEENPEIWTTELQQEIIEMIQRAVDLEIDYARDCLPRGILGLRASMFIDYVQHIADRR 299 Query: 463 LVELGYDRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQKANVTT 507 L +G +++T NPF WM E I L + NFFE RV EYQ A T Sbjct: 300 LERIGLKPIYHTKNPFPWMSETIDLNKEKNFFETRVTEYQHAASLT 345
emb|CAA07027.1| ribonucleotide reductase small subunit [Feline herpesvirus 1] (331 aa) Score: 134 bits (338), Expect: 4.75273e-30 Length: 302, Idn/Pos/Gap = 97/148/13 (32%/49%/4%) Query: 206 ADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFA 265 A RY + ++ P I +A+ W ++ + D+ L+E+E F + F + Sbjct: 28 ASRY-FYTLECPDINMLRSLSIANRWLETDLPIGDDIKDITT-LSESELDFYRFLFTFLS 85 Query: 266 ASDGIV---LENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVK-DPEERT 321 A+D +V L NL+E F + + +Y Q +E +HS YS + K D E RT Sbjct: 86 AADDLVNLNLGNLSELFTQK----DILHYYIEQECIEVVHSRVYSAIQLLLFKCDAEART 141 Query: 322 HLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLM 381 +M T P + RK W IG S E+ + +EGIFF SF AI +L+ + Sbjct: 142 AYVDSMITKPELARKVEWLRTRIGECESIAEKYILMILIEGIFFVASFAAIAYLRTHNIF 201 Query: 382 PGLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALP 440 +N+LISRDE +H +C +Y + LPA+ + ERIHS+ R+AVE E EF+ P Sbjct: 202 IVTCQTNDLISRDEAIHTTASCCIYNNYLPAQIKPSTERIHSLFREAVELECEFISTCAP 261 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMEL--ISLQGKTNFFEKRVG 498 +N + Y+ + ADRLL + ++N P P L + ++ TNFFEK Sbjct: 262 RCSNLLNVADICNYVRYSADRLLGIIKVAPIFNVPPPHPNFPLAFMVIEKHTNFFEKHST 321 Query: 499 EY 500 Y Sbjct: 322 TY 323
emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila abortus S26/3] ref|YP_220141.1| putative ibonucleoside reductase small subunit [Chlamydophila abortus S26/3] (349 aa) Score: 134 bits (338), Expect: 5.80645e-30 Length: 338, Idn/Pos/Gap = 97/157/24 (28%/46%/7%) Query: 187 ERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR 246 E RV+ + + + D L PIK+ +E Y A+ W E+ +A D++ W+ Sbjct: 10 EGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYVNGCANTWLPTEVPMARDIELWK 69 Query: 247 -NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSET 305 N L+E ER + L FF+ ++ +V N+ + + PEAR + Q E +H+ T Sbjct: 70 SNNLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHT 129 Query: 306 YSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGS--DASFQ-----------E 352 + + ++ D E +F A +R K + + G D +F + Sbjct: 130 FLYICESLGLDEAE---VFNAYNERATIRAKDDFQMTLTGDVLDPNFSTNSLEGLSQFIK 186 Query: 353 RLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPA 411 LV + + EGIFF F I ++ M G+ + I RDE +H +F L + + Sbjct: 187 NLVGYYIIMEGIFFYSGFVMILSFHRQNKMTGIGEQYQYILRDETIHLNFGIDLINGIKE 246 Query: 412 EER---VP--AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVEL 466 E P I ++I AV+ E E+ D LP ++G+ + Y+ +ADR L + Sbjct: 247 ENPEVWTPELQSEIIALIEKAVDLEIEYARDCLPRGILGLKASMFIDYVRHIADRRLERI 306 Query: 467 GYDRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQKA 503 G ++++ NPF WM E I L + NFFE RV EYQ A Sbjct: 307 GLKPIYHSKNPFPWMSETIDLNKEKNFFETRVIEYQTA 344
gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae TW-183] ref|NP_877294.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae TW-183] (365 aa) Score: 134 bits (336), Expect: 9.57921e-30 Length: 355, Idn/Pos/Gap = 100/161/27 (28%/45%/7%) Query: 170 IKEKGGTSAVIVGLDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVAS 229 I EK G LDG + RV + + D L PIK+ +E Y A+ Sbjct: 12 ITEKRGAKMEADILDGKLK---RVEVSKKGLVNCNQVDVNQLVPIKYKWAWEHYLNGCAN 68 Query: 230 FWTAEEIDLAADMDHWR-NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEA 288 W E+ +A D++ W+ + L+E ER + L FF+ ++ +V N+ + + PEA Sbjct: 69 NWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEA 128 Query: 289 RCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRK------------ 336 R + Q E +H+ T+ + ++ D E +F A +R K Sbjct: 129 RQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNERASIRAKDDFQMTLTVDVL 185 Query: 337 -AYWAIRWIGSDASFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 394 ++++ F + LV + + EGIFF F I ++ M G+ + I RD Sbjct: 186 DPNFSVQSSEGLGQFIKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMTGIGEQYQYILRD 245 Query: 395 EGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQ 449 E +H +F L + + E E I ++I AVE E E+ D LP ++G+ Sbjct: 246 ETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGLRSS 305 Query: 450 LMSAYIEFVADRLLVELGYDRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQKA 503 + Y+ +ADR L +G ++++ NPF WM E + L + NFFE RV EYQ A Sbjct: 306 MFIDYVRHIADRRLERIGLKPIYHSRNPFPWMSETMDLNKEKNFFETRVTEYQTA 360
ref|NP_301040.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae J138] gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila pneumoniae AR39] ref|NP_225179.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae CWL029] dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae J138] sp|Q9Z6S4|RIR2_CHLPN Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae CWL029] ref|NP_445409.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila pneumoniae AR39] (346 aa) Score: 132 bits (332), Expect: 2.58549e-29 Length: 342, Idn/Pos/Gap = 96/157/27 (28%/45%/7%) Query: 183 LDGSERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADM 242 LDG + RV + + D L PIK+ +E Y A+ W E+ +A D+ Sbjct: 6 LDGKLK---RVEVSKKGLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDI 62 Query: 243 DHWR-NRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENI 301 + W+ + L+E ER + L FF+ ++ +V N+ + + PEAR + Q E + Sbjct: 63 ELWKSDELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAV 122 Query: 302 HSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRK-------------AYWAIRWIGSDA 348 H+ T+ + ++ D E +F A +R K ++++ Sbjct: 123 HTHTFLYICESLGLDEGE---VFNAYNERASIRAKDDFQMTLTVDVLDPNFSVQSSEGLG 179 Query: 349 SFQERLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYS 407 F + LV + + EGIFF F I ++ M G+ + I RDE +H +F L + Sbjct: 180 QFIKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMTGIGEQYQYILRDETIHLNFGIDLIN 239 Query: 408 MLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRL 462 + E E I ++I AVE E E+ D LP ++G+ + Y+ +ADR Sbjct: 240 GIKEENPEVWTTELQEEIVALIEKAVELEIEYAKDCLPRGILGLRSSMFIDYVRHIADRR 299 Query: 463 LVELGYDRLWNTPNPFDWM-ELISLQGKTNFFEKRVGEYQKA 503 L +G ++++ NPF WM E + L + NFFE RV EYQ A Sbjct: 300 LERIGLKPIYHSRNPFPWMSETMDLNKEKNFFETRVTEYQTA 341
ref|NP_829639.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila caviae GPIC] gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila caviae GPIC] (346 aa) Score: 131 bits (329), Expect: 5.8568e-29 Length: 333, Idn/Pos/Gap = 92/157/24 (27%/47%/7%) Query: 192 RVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR-NRLT 250 RV+ + + + D L PIK+ +E Y A+ W E+ +A D++ W+ N L+ Sbjct: 12 RVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSNDLS 71 Query: 251 EAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLI 310 E ER + L FF+ ++ +V N+ + + PEAR + Q E +H+ T+ + Sbjct: 72 EDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYIC 131 Query: 311 DAYVKDPEERTHLFRAMETMPCVRRKAYWAIRW--------IGSDA-----SFQERLVAF 357 ++ D E +F A ++ K + + +D+ F + LV + Sbjct: 132 ESLGLDEGE---VFNAYNERATIKAKDDFQMTLTVDVLNPNFSTDSVEGLRQFIKNLVGY 188 Query: 358 AAV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE---- 412 + EGIFF F I ++ M G+ + I RDE +H +F L + + E Sbjct: 189 YIIMEGIFFYSGFVMILSFHRQNKMTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEV 248 Query: 413 -ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRL 471 + + I ++I+ AV+ E E+ D LP ++G+ + Y+ +ADR L +G + Sbjct: 249 WSQELQDEIIALIQKAVDLEIEYAKDCLPRGILGLKSSMFIDYVRHIADRRLERIGLKPI 308 Query: 472 WNTPNPFDWM-ELISLQGKTNFFEKRVGEYQKA 503 + + NPF WM E I L + NFFE RV EYQ + Sbjct: 309 YYSKNPFPWMSETIDLNKEKNFFETRVTEYQTS 341
ref|NP_700628.1| ribonucleotide reductase small subunit, putative [Plasmodium falciparum 3D7] gb|AAN35352.1| ribonucleotide reductase small subunit, putative [Plasmodium falciparum 3D7] gb|AAT76849.1| ribonucleotide reductase small subunit [Plasmodium falciparum] (324 aa) Score: 129 bits (325), Expect: 1.62086e-28 Length: 299, Idn/Pos/Gap = 77/145/21 (25%/48%/7%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW----RNRLTEAERYFVSH 259 E R+ +FPIK+ + +YK + FWTAE+ + D + +N L + + Sbjct: 24 ENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDKQYLENIDKNMLVKDLHVYEEQ 83 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE 319 L + + + ++IPE R FYGFQ+ MENIH E Y+ + + Y+ D ++ Sbjct: 84 AL-------------ITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFETYIPDSKQ 130 Query: 320 RTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSF-CAIFWLKKR 378 + + + + V +K W S+ + +LV + + F+G+ I + K+ Sbjct: 131 KRVIINKVIELDSVLKKQKWLTEIFESNIPYYNKLV-LLYISKVLFNGTLNILIGYCKEN 189 Query: 379 GLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDA 438 ++P L +E I RDE LH DF+ + L ++ E + + AV+ E +F + Sbjct: 190 SILPCLCNVHEKIHRDEYLHGDFSVMCCNHLV--NKLKYEHVLDYFKMAVDLEYQFSLEM 247 Query: 439 LPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRV 497 L ++++ + ++ + A++E++ D +L L Y + +N+ PF W E + N E+ V Sbjct: 248 LELNVLKIKKEQVRAFLEYLTDTMLTNLKYPKHYNSKYPFSWPEFTKIIVNENGKEETV 306
gb|AAX30834.1| unknown [Schistosoma japonicum] (97 aa) Score: 123 bits (309), Expect: 1.21107e-26 Length: 87, Idn/Pos/Gap = 58/68/1 (66%/78%/1%) Query: 295 QIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIG-SDASFQER 353 QIA+ENIHSE YSLLID Y+KD +ER LF A+ + CV +KA WA+ WIG S ++F ER Sbjct: 2 QIAIENIHSEMYSLLIDTYIKDSKERDFLFNAISNLTCVAKKAQWALDWIGDSKSTFAER 61 Query: 354 LVAFAAVEGIFFSGSFCAIFWLKKRGL 380 LVAFAAVEG+FFSGSF AIFWLK L Sbjct: 62 LVAFAAVEGVFFSGSFAAIFWLKSEDL 88
gb|AAD56212.1| ribonucleotide reductase small subunit [Gallid herpesvirus 1] ref|YP_182369.1| Ribonucleotide reductase small subunit [Gallid herpesvirus 1] (310 aa) Score: 123 bits (309), Expect: 1.33861e-26 Length: 290, Idn/Pos/Gap = 84/147/13 (28%/50%/4%) Query: 219 IFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LENL 275 I E +A+ W E+ + D + + LT E F V AF AA+D ++ + NL Sbjct: 18 IRELRDLSIANNWNEFELCYSRD-EKDVDLLTPEELDFYKLVFAFLAAADDLINLDIGNL 76 Query: 276 AERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPCVR 334 F+ + + +Y QI +E +HS TYSL+ + + D R P ++ Sbjct: 77 MTLFLHK----DIQHYYAEQIRIETVHSRTYSLVQMILFKGDLHARDRYVTEAIKDPAIK 132 Query: 335 RKAYWAIR-WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +K W R + +D + E+ + +EGIFF SF AI +L++R + + SN+LISR Sbjct: 133 KKIDWLNRVQVETDLTLPEKYILMILLEGIFFVASFAAIAFLRRRNIFVVMCQSNDLISR 192 Query: 394 DEGLHCDFACHLYSMLPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMS 452 DE +H +C +Y+ + + P A+RIH + ++A+E E F+ P + ++ + + Sbjct: 193 DEAVHTTASCRIYNNWLGDHKKPSAKRIHQLFKEAIEIECNFLASRAPQASRLIDLEAIQ 252 Query: 453 AYIEFVADRLLVELGYDRLWNT--PNPFDWMELISLQGKTNFFEKRVGEY 500 +++ + DRLL +G +++ P+P + L+S+ NFFE R Y Sbjct: 253 SFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHRSTAY 302
emb|CAA90928.1| UL40 [Bovine herpesvirus 1] emb|CAA06093.1| ribonucleotide reductase small subunit [Bovine herpesvirus type 1.1] emb|CAA88899.1| UL40 [Bovine herpesvirus 1] pir||WMBEB4 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - bovine herpesvirus 1 (strain 34) ref|NP_045318.1| ribonucleotide reductase small subunit [Bovine herpesvirus 1] gb|AAA46063.1| ribonucleotide reductase small subunit sp|Q01319|RIR2_BHV1C Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (314 aa) Score: 123 bits (308), Expect: 1.38404e-26 Length: 311, Idn/Pos/Gap = 100/150/19 (32%/48%/6%) Query: 203 AEEADRYTL-------FPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERY 255 AE AD TL + + P + VA+ W E LA D RL+ AE Sbjct: 2 AEAADAATLTRKYKYFYETECPDLDHLRSLSVANRWLETEFPLADDAKD-VARLSGAELE 60 Query: 256 FVSHVLAFFAASDGIV---LENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-ID 311 F + AF +A+D +V L +L+E F + + +Y Q ++E +HS YS + + Sbjct: 61 FYRFLFAFLSAADDLVNVNLGDLSELFTQK----DILHYYIEQESIEVVHSRVYSAIQLL 116 Query: 312 AYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCA 371 + D R P VRRK W R + + S E+ V +EGIFFS SF A Sbjct: 117 LFRNDAVARAGYVEGALGDPAVRRKVDWLERRVAAAESVAEKYVLMILIEGIFFSSSFAA 176 Query: 372 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECE 431 I +L+ L +N+LISRDE +H +C ++ ER P RI+ + R+A + Sbjct: 177 IAYLRTHNLFVVTCQTNDLISRDEAVHTAASCCIFDNYLGGERPPPARIYELFREAWKLS 236 Query: 432 KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNP-FDW-MELISLQGK 489 A S I ++ + +SAY+E+ ADRLL + L+ TP P D+ + L++ + Sbjct: 237 ASLFGCAPRGSHI-LDVEAISAYVEYSADRLLAAIQLPPLFGTPPPGTDFPLALMTAEKH 295 Query: 490 TNFFEKRVGEY 500 TNFFE+R Y Sbjct: 296 TNFFERRSTNY 306
gb|EAA19522.1| ribonucleotide reductase, putative [Plasmodium yoelii yoelii] (373 aa) Score: 122 bits (307), Expect: 1.86896e-26 Length: 284, Idn/Pos/Gap = 73/139/8 (25%/48%/2%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E R+ +FPIK+ + +YK + FWTAE+ + D + N + + + + F Sbjct: 24 ENQFRWVMFPIKYKTFWNYYKEIESLFWTAEDHNFDKDKP-FLNSMDKTTLSKLLELFCF 82 Query: 264 FAASDGIVLENLA---ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEER 320 ++ D + + A + + ++IPE R FYGFQ+ MENIH+E Y+ + ++Y D +++ Sbjct: 83 YSLKDLHLRDEQAIITSKLLDIIQIPEGRAFYGFQMCMENIHNEVYACIFESYSLDSKQK 142 Query: 321 THLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIF-WLKKRG 379 + + V +K W ++ F +L+ + + F+G F + + K+ Sbjct: 143 KEIIDKVLKYESVFKKQNWLYNEFEANIPFYNKLI-LLYISKVLFNGGFSILASYCKENN 201 Query: 380 LMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDAL 439 ++ T + I RDE L DF+ + L + R E + + + AVE E F D L Sbjct: 202 ILSSFTGVHAKIQRDEYLQGDFSVMCCNHLNNKLRY--ENVLNYFKAAVELEYNFCVDML 259 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMEL 483 + + + + +++++AD +L+ L Y + +N+ PF W E Sbjct: 260 DFDFLKITKDQVKQFLQYLADTMLLNLKYPKHYNSKYPFAWKEF 303
gb|AAC58107.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1] pir||T03155 ribonucleoside-diphosphate reductase (EC 1.17.4.1), small chain - alcelaphine herpesvirus 1 ref|NP_065559.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1] (305 aa) Score: 120 bits (301), Expect: 9.75171e-26 Length: 294, Idn/Pos/Gap = 85/149/8 (28%/50%/2%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 L+ HP FE + + W +I+L+ D+ + ++EA+ F ++ F ++ + Sbjct: 8 LYVCDHPGFFELTQETFQNRWFPAQINLSVDVK-CLSLMSEADVNFYKYLFTFLGMAETL 66 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLF-RAMET 329 V N+ E + D E + + +Y Q+AME +H + Y +++ K+ T F A+ Sbjct: 67 VNFNIDE-LLVDFECHDIKHYYCEQMAMECVHGKVYFNILNMLFKNNLAATWEFAEAVLK 125 Query: 330 MPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 +++K W I + E+++ F +EG+FF SF I L+ +G+MPG+ +N+ Sbjct: 126 DEALQKKLEWLESKIKMAKTKAEKVLIFYLIEGVFFISSFYCIGLLRVKGVMPGVCMAND 185 Query: 390 LISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFV-CDALPVSLIGMN 447 ISRDE LH A LY +M+P EER +E + S+ ++AVE E F+ V+ + M+ Sbjct: 186 YISRDELLHTRAAALLYNTMIPKEERPSSEWVVSLFKEAVEIECAFIEAKTKQVTFVSMD 245 Query: 448 QQLMSAYIEFVADRLLVELGYDRLWNTPNPFDW-MELISLQGKTNFFEKRVGEY 500 + A++E ADRLL + R + + P + +FFE+ EY Sbjct: 246 D--IRAFLEATADRLLNSIELPRYYKSDPPQSCPLTYTGCIKNVSFFERESTEY 297
gb|AAG30080.1| UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus 1] gb|AAG45778.1| UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus 1] ref|NP_073334.1| UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus 1] (355 aa) Score: 120 bits (300), Expect: 1.20136e-25 Length: 287, Idn/Pos/Gap = 82/138/5 (28%/48%/1%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 P I + + WT E +A D++ +L+E E+ F + F +A+D +V N+ Sbjct: 63 PDIGNLRSLSIMNRWTETEFVIADDLED-VGKLSEDEKNFYRFLFTFLSAADDLVNLNI- 120 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPCVRR 335 + + + +Y Q +E +HS YS++ + + D R + P + Sbjct: 121 DSLLSLFTQKDIHHYYFEQECIEAVHSRAYSIIQLMLFSNDQAARQEYVTSTLRSPAILS 180 Query: 336 KAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 395 K W R + S E+ + +EGIFF+ SF AI +L+ L N LISRDE Sbjct: 181 KLEWLERRVAECTSIAEKYILMILIEGIFFTASFAAIAYLRVNNLFVVTCQINNLISRDE 240 Query: 396 GLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 +H + +C ++ A + RIH++ ++AV E EF+ A P + +N + +Y+ Sbjct: 241 AIHVEASCCIFKNYLAGPKPTTARIHTLFKEAVRLECEFLRTAAPRTSNIINIDAICSYV 300 Query: 456 EFVADRLLVELGYDRLWNTPN-PFDW-MELISLQGKTNFFEKRVGEY 500 + ADRLL L +++ P P D+ + L+S TNFFE+R Y Sbjct: 301 RYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAY 347
ref|YP_067954.1| BaRF1 [Cercopithecine herpesvirus 15] gb|AAK95424.1| BaRF1 [cercopithicine herpesvirus 15] (302 aa) Score: 119 bits (297), Expect: 3.00796e-25 Length: 273, Idn/Pos/Gap = 86/137/6 (31%/50%/2%) Query: 231 WTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARC 290 W A I L D + L E + F + F A ++ +V N+ E + E + Sbjct: 25 WFAAHIVLTKDCGCLK-LLNERDLEFYKFLFTFLAMAEKLVNFNIDE-LVTSFESHDIDH 82 Query: 291 FYGFQIAMENIHSETYSLLIDA-YVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDAS 349 +Y Q AMEN+H ETY+ +++ + D A+ ++ K W + + + Sbjct: 83 YYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADGALQAKISWLRDKVAAAVT 142 Query: 350 FQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLY-SM 408 E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LY SM Sbjct: 143 LPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGVCLANNYISRDELLHTRAASLLYNSM 202 Query: 409 LPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGY 468 +R A+ I + R AVE E F+ +A + ++ Q + ++E ADR+L ++G Sbjct: 203 TAPADRPGAQWIQELFRTAVEVETAFI-EARGWGVTLVDVQAIRQFLEATADRILGDIGL 261 Query: 469 DRLWNTPNPFDW-MELISLQGKTNFFEKRVGEY 500 L+ TP P D + ++ +TNFFE+ +Y Sbjct: 262 PPLYGTPPPRDCPLTYMTSIKQTNFFEQESADY 294
gb|AAS01682.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2] (343 aa) Score: 119 bits (297), Expect: 3.26971e-25 Length: 290, Idn/Pos/Gap = 82/141/11 (28%/48%/3%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LE 273 P I + + WT E ++ D+ + LTE ERYF + F +A+D +V ++ Sbjct: 51 PDIGHLRALSIMNRWTETEFVISDDLRD-VSMLTEEERYFYRFLFTFLSAADDLVNLNID 109 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPC 332 NL F + + +Y Q +E +HS YS++ + + D R + P Sbjct: 110 NLLGLFSQK----DIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSLARAEYVKTSLNSPA 165 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 ++ K W + + +S E+ + +EGIFFS SF AI +L+ L N LIS Sbjct: 166 IQSKLDWLNKRVIECSSIAEKYILMILIEGIFFSASFAAIAYLRINNLFVVTCQINNLIS 225 Query: 393 RDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMS 452 RDE +H + +C ++ + R+ + ++AV+ E F+ A P + ++ + + Sbjct: 226 RDEAIHVEASCCIFKNYLMGPKPSIGRVQELFKEAVQIECAFLRTAAPHNSQLLDVEAIC 285 Query: 453 AYIEFVADRLLVELGYDRLWNTPNPF-DW-MELISLQGKTNFFEKRVGEY 500 +Y+ + ADRLL EL ++N P P D+ + L++ TNFFE+R Y Sbjct: 286 SYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAY 335
ref|NP_057801.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2] gb|AAF66775.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2] gb|AAG14233.1| UL40 ribonucleotide reductase small subunit-like protein [Gallid herpesvirus 2] (343 aa) Score: 119 bits (297), Expect: 3.26971e-25 Length: 290, Idn/Pos/Gap = 82/141/11 (28%/48%/3%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LE 273 P I + + WT E ++ D+ + LTE ERYF + F +A+D +V ++ Sbjct: 51 PDIGHLRALSIMNRWTETEFVISDDLRD-VSMLTEEERYFYRFLFTFLSAADDLVNLNID 109 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPC 332 NL F + + +Y Q +E +HS YS++ + + D R + P Sbjct: 110 NLLGLFSQK----DIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSLARAEYVKTSLNSPA 165 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 ++ K W + + +S E+ + +EGIFFS SF AI +L+ L N LIS Sbjct: 166 IQSKLDWLNKRVIECSSIAEKYILMILIEGIFFSASFAAIAYLRINNLFVVTCQINNLIS 225 Query: 393 RDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMS 452 RDE +H + +C ++ + R+ + ++AV+ E F+ A P + ++ + + Sbjct: 226 RDEAIHVEASCCIFKNYLMGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQLLDVEAIC 285 Query: 453 AYIEFVADRLLVELGYDRLWNTPNPF-DW-MELISLQGKTNFFEKRVGEY 500 +Y+ + ADRLL EL ++N P P D+ + L++ TNFFE+R Y Sbjct: 286 SYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAY 335
gb|AAP41458.1| small subunit of ribonucleotide reductase [Cercopithecine herpesvirus 1] ref|NP_851900.1| small subunit of ribonucleotide reductase [Cercopithecine herpesvirus 1] dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus 1] (338 aa) Score: 117 bits (293), Expect: 8.39423e-25 Length: 311, Idn/Pos/Gap = 93/149/16 (29%/47%/5%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFF 264 + +RY + + P I + + W E+ A D + LT+ E F + F Sbjct: 31 DPERY-FYTTQCPDINHLRSLSILNRWLESELVFAGDEEDVHG-LTDDELNFYRFLFTFL 88 Query: 265 AASDGIVLENLA--ERFMRDVEIPEARCFYGFQIAMENIHSETYSL--LIDAYVKDPEER 320 +A+D +V ENL +I +Y Q A+E +HS YS+ L+ + + R Sbjct: 89 SAADDLVTENLGGLSGLFPQKDILH---YYVEQEAIEVVHSRVYSIIQLVLFHNNEQARR 145 Query: 321 THLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGL 380 ++ R + P +R K W + + S E+ + +EGIFF+ SF AI +L+ L Sbjct: 146 EYVSRTIH-HPAIRVKVEWLEARVQACESVPEKFILMILIEGIFFAASFAAIGFLRTNNL 204 Query: 381 MPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP-AERIHSMIRDAVECEKEFVCDAL 439 + SN+LISRDE +H +C++Y+ R P AER++ + R+AV+ E F+ Sbjct: 205 LRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHRKPTAERVYRLFREAVDIEIGFIRSQA 264 Query: 440 PVSLIGMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNPFDW--MELISLQGKTNFFE 494 P + ++ + A Y+ F ADRLLV + L+ P P + L+S + TNFFE Sbjct: 265 PANSRVLDAAALDAIENYVRFSADRLLVLIKMKPLFGAPAPAPSFPLSLMSTEKHTNFFE 324 Query: 495 KRVGEYQKANV 505 R Y A V Sbjct: 325 CRSTAYAGAVV 335
gb|AAQ73719.1| unknown [Psittacid herpesvirus 1] ref|NP_944413.1| unknown [Psittacid herpesvirus 1] (313 aa) Score: 117 bits (292), Expect: 1.27398e-24 Length: 294, Idn/Pos/Gap = 88/145/16 (29%/49%/5%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LE 273 P + E +A+ W E+ A D + + LTE E F V F AA+D +V L+ Sbjct: 18 PDMRELRDLSIANNWNEFELCYARD-EKDVDCLTEDECDFYKFVFCFLAAADDLVNVNLD 76 Query: 274 NLAERF-MRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVK-DPEERTHLFRAMETMP 331 NL F +D++ +Y QI +E +HS TYS + + + D R Sbjct: 77 NLVTLFPQKDIQ-----HYYAEQIRIETVHSRTYSAVQLVFFRNDAIARDRYVLEAVKDG 131 Query: 332 CVRRKAYW--AIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 +RRK W I+ G + + E+ + +EGIFF SF AI +L++ + SN+ Sbjct: 132 AIRRKIDWLSRIQNEGDELTLPEKYILMILIEGIFFVSSFAAISYLRRHSIFQVTCQSND 191 Query: 390 LISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 LISRDE +H +C +Y + L + +RIH + ++AVE E +F+ P + ++ Sbjct: 192 LISRDETIHTTASCCIYNNWLKGHPKPSVKRIHQLFKEAVEIECDFLVARAPKAARLIDI 251 Query: 449 QLMSAYIEFVADRLLVELGYDRLWN--TPNPFDWMELISLQGKTNFFEKRVGEY 500 + +++ F A+R L +G +++ P+P + L+SL+ NFFE R Y Sbjct: 252 DAIQSFVRFTANRWLSMIGVPTIYDDPAPDPTFPLALMSLEKNVNFFEHRSTAY 305
emb|CAA24843.1| unnamed protein product [Human herpesvirus 4] emb|CAD53406.1| ribonucleoside-diphosphate reductase small chain [Human herpesvirus 4] ref|NP_039854.1| Ribonucleotide reductase, small subunit [Human herpesvirus 4] pir||WMBE12 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - human herpesvirus 4 (strain B95-8) sp|P03175|RIR2_EBV Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (38 kDa subunit) (302 aa) Score: 116 bits (291), Expect: 1.50535e-24 Length: 273, Idn/Pos/Gap = 85/136/6 (31%/49%/2%) Query: 231 WTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARC 290 W A I L D + L E + F + F A ++ +V N+ E + E + Sbjct: 25 WFAAHIVLTKDCGCLK-LLNERDLEFYKFLFTFLAMAEKLVNFNIDE-LVTSFESHDIDH 82 Query: 291 FYGFQIAMENIHSETYSLLIDA-YVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDAS 349 +Y Q AMEN+H ETY+ +++ + D A+ ++ K W + + + Sbjct: 83 YYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVT 142 Query: 350 FQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLY-SM 408 E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LY SM Sbjct: 143 LPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSM 202 Query: 409 LPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGY 468 +R A I + R AVE E F+ +A + ++ + + ++E ADR+L ++G Sbjct: 203 TAKADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIGQ 261 Query: 469 DRLWNTPNPFDW-MELISLQGKTNFFEKRVGEY 500 L+ TP P D + ++ +TNFFE+ +Y Sbjct: 262 APLYGTPPPKDCPLTYMTSIKQTNFFEQESSDY 294
gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str. Twist] ref|NP_789622.1| ribonucleotide-diphosphate reductase small chain [Tropheryma whipplei TW08/27] emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma whipplei TW08/27] ref|NP_787810.1| ribonucleotide reductase beta chain [Tropheryma whipplei str. Twist] (327 aa) Score: 116 bits (290), Expect: 2.17308e-24 Length: 317, Idn/Pos/Gap = 85/151/28 (26%/47%/8%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 D L P+++ + Y++ VA+ W EI L D+ ++ ++T E++ V+ ++++F Sbjct: 10 DGLLLKPVRYQWAMDLYEQAVANTWFPNEIQLGEDIADFK-KMTHEEKHAVTFLMSYFNP 68 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 ++ +V + LA + PE + Q+ E H ++ +++ + P +R + + Sbjct: 69 NELLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETF---PIDREEAYSS 125 Query: 327 METMPCVRRKAYWAIRWI-------------GSDASFQERLVAFAAV-EGIFFSGSFCAI 372 +P + RK + + +I F LVA+ V EGI+F F A Sbjct: 126 HIEVPSMARKEEFEVEYIRRMTEETLDITTTEGKRDFIRNLVAYNVVLEGIWFYSGFMAA 185 Query: 373 FWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP-------AERIHSMIR 425 + ++R L+ + I RDE LH F +L +L E P A+ I MI Sbjct: 186 LYFRQRNLLRNFGSLIDWIVRDESLHLKFGINL--ILTVLEENPDLQTSDFADEIRGMII 243 Query: 426 DAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELIS 485 VE E+E+ D LP ++G+N ++ Y++++ADR L ELG+D +N NP WM + Sbjct: 244 AGVEMEEEYNHDLLPNGILGLNSGYINQYVKYLADRRLEELGFDPEYNVTNPAKWMATAN 303 Query: 486 LQGK-TNFFEKRVGEYQ 501 + NFFE Y+ Sbjct: 304 DTFELVNFFEAINTSYE 320
emb|CAH97095.1| ribonucleotide reductase small subunit, putative [Plasmodium berghei] (299 aa) Score: 115 bits (288), Expect: 3.67592e-24 Length: 301, Idn/Pos/Gap = 74/144/13 (24%/47%/4%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 +FPIK+ + +YK + FWTAE+ + D + N + + + +L + Sbjct: 2 MFPIKYKTFWNYYKEE-SLFWTAEDHNFDKDKP-FLNSMDKITLSKLLELLYLHLCDEQA 59 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 ++ + + ++IPE R FYGFQ+ MENIH+E Y+ + ++Y D +++ + + Sbjct: 60 II---TSKLLDIIQIPEGRAFYGFQMCMENIHNEVYACIFESYSSDSKQKKEIIDKVLKY 116 Query: 331 PCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIF-WLKKRGLMPGLTFSNE 389 V +K W ++ F +L+ + + F+G F + K+ ++ T +E Sbjct: 117 ESVFKKQNWLYSEFEANIPFYNKLI-LLYISKVLFNGGFSILASHCKENNILSCFTGVHE 175 Query: 390 LISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQ 449 I RDE L DF+ + L ++ E + + AVE E F D L + + + ++ Sbjct: 176 KIQRDEYLQGDFSVMCCNHL--NNKLKYESVLYYFKSAVELEYNFCVDMLDFNFLKITKE 233 Query: 450 LMSAYIEFVADRLLVELGYDRLWNTPNPFDWME----LISLQGKTNFFEKRVGEYQKANV 505 + +++++AD +L+ L Y + +N+ PF W E ++S K +K Y + + Sbjct: 234 QVKQFLQYLADTMLLNLKYPKHFNSKYPFTWKEFSKIVVSENAKNESVKKSSDLYGEKQI 293 Query: 506 T 506 T Sbjct: 294 T 294
ref|YP_068343.1| small subunit of ribonucleotide reductase; RR2 [Suid herpesvirus 1] emb|CAA50977.1| ribonucleotide reductase [Pseudorabies virus] emb|CAA56776.1| ribonucleotid reductase, small subunit [Pseudorabies virus] tpg|DAA02163.1| TPA: small subunit of ribonucleotide reductase; RR2 [Suid herpesvirus 1] pir||S47526 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - suid herpesvirus 1 sp|P50645|RIR2_PRVKA Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) prf||2019240B ribonucleotide reductase:SUBUNIT=small (303 aa) Score: 114 bits (286), Expect: 6.06436e-24 Length: 281, Idn/Pos/Gap = 88/137/12 (31%/48%/4%) Query: 227 VASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LENLAERFMRDV 283 VA+ W ++ L D L+E E F + AF +A+D +V L +L+E F + Sbjct: 20 VANRWLETDLPLGDDAKD-VAALSEPELEFYRFLFAFLSAADDLVNVNLGSLSELFTQK- 77 Query: 284 EIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 + +Y Q +E +HS YS + + + D R RA +RRK W Sbjct: 78 ---DILHYYIEQECIEVVHSRVYSAIQLMLFRGDAAARERYVRAALRDEAIRRKVEWLDS 134 Query: 343 WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 + AS E+ + +EGIFF+ SF +I +L+ L SN+ ISRDE +H + Sbjct: 135 RVAECASVAEKYLLMILIEGIFFASSFASISYLRTHNLFVVTCQSNDFISRDEAIHTSAS 194 Query: 403 CHLYSMLPAEERVPAE-RIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADR 461 C +Y+ + P E RIH + +AVE E EF+ P + ++ + +Y+ + ADR Sbjct: 195 CCIYNNYLGDAPRPDEARIHQLFAEAVEIECEFLRARAPRDSLLLDLPAIISYVRYSADR 254 Query: 462 LLVELGYDRLWNTPNP-FDW-MELISLQGKTNFFEKRVGEY 500 LL +G L+ P P D+ M L+ + TNFFE+R Y Sbjct: 255 LLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFERRSTNY 295
gb|AAA80557.1| ribonucleotide reductase small subunit (354 aa) Score: 114 bits (284), Expect: 9.83912e-24 Length: 287, Idn/Pos/Gap = 80/135/6 (27%/47%/2%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 P I + + WT E +A D++ + E+ F + F +A+D +V N+ Sbjct: 63 PDIGNLRSLSIMNRWTETEFVIADDLEDVGK--LKNEKNFYRFLFTFLSAADDLVNLNI- 119 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPCVRR 335 + + + +Y Q +E +HS YS++ + + D R + P + Sbjct: 120 DSLLSLFTQKDIHHYYFEQECIEAVHSRAYSIIQLMLFSNDQAARQEYVTSTLRSPAILS 179 Query: 336 KAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 395 K W R + S E+ + +EGIFF+ SF AI +L+ L N LISRDE Sbjct: 180 KLEWLERRVAECTSIAEKYILMILIEGIFFTASFAAIAYLRVNNLFVVTCQINNLISRDE 239 Query: 396 GLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 +H + +C ++ A + RIH++ ++AV E EF+ A P + +N + +Y+ Sbjct: 240 AIHVEASCCIFKNYLAGPKPTTARIHTLFKEAVTVECEFLRTAAPRTSNIINIDAICSYV 299 Query: 456 EFVADRLLVELGYDRLWNTPN-PFDW-MELISLQGKTNFFEKRVGEY 500 + ADRLL L +++ P P D+ + L+S TNFFE+R Y Sbjct: 300 RYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAY 346
ref|NP_733908.1| ORF54 [Callitrichine herpesvirus 3] gb|AAK38263.1| ORF54 [callitrichine herpesvirus 3] (302 aa) Score: 113 bits (283), Expect: 1.17234e-23 Length: 278, Idn/Pos/Gap = 88/141/16 (31%/50%/5%) Query: 231 WTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR----DVEIP 286 W A I L D + R L + F + F A ++ +V N+ E + D+E Sbjct: 25 WVAVHISLVRDCEGVR-ELNPRDLEFYKFLFTFLAMAEKLVNFNIDELLPQFCSHDIE-- 81 Query: 287 EARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMP--CVRRKAYWAIRWI 344 +Y Q AMENIH ETY+ +++ D +++ A E + ++ K W + Sbjct: 82 ---HYYTEQKAMENIHGETYANILNMLF-DGDKKAVAQYADEVIADKALQAKICWLNGMV 137 Query: 345 GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACH 404 S + E+++ F +EGIFF SF +I L+ RG+MPG+ +N ISRDE LH A Sbjct: 138 NSAVTKAEKILIFLLIEGIFFISSFYSIAVLRTRGIMPGICLANNYISRDELLHTTAATL 197 Query: 405 LY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLL 463 LY SM ER +E I ++ R AV+ E F+ +A + ++ + + ++E ADR+L Sbjct: 198 LYNSMTSKSERPQSEWIEALFRRAVDVEYNFI-EARGRGVTNIDLKGIRDFLEATADRIL 256 Query: 464 VELGYDRLWNTPNPFDW-MELISLQGKTNFFEKRVGEY 500 +LG +++T P D + ++ TNFFE+ EY Sbjct: 257 GDLGMTAIYDTRPPPDCPLTYMTSVKHTNFFEQENSEY 294
ref|ZP_00317976.1| COG0208: Ribonucleotide reductase, beta subunit [Microbulbifer degradans 2-40] (368 aa) Score: 112 bits (281), Expect: 2.34323e-23 Length: 317, Idn/Pos/Gap = 90/149/29 (28%/47%/9%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 D L P K+P ++F+ + WT +I+++ D+ +++ LTEAER+ +VL++ Sbjct: 52 DINQLAPFKYPWAWDFFINANKNHWTPLDINMSQDVYDYKHNLTEAERHMYENVLSYLTT 111 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 326 SD + + N+ M + PE + + Q+ E +H+ TY I+ D E + +R Sbjct: 112 SDILAMRNIGLAVMEKMTAPELQIYQARQVYEEALHTWTYQHCIETLGLDQGEIYNRYR- 170 Query: 327 METMPCVRRKAYWAIRWIGS------DASFQERL-------VAFAAV-EGIFFSGSFCAI 372 +P + K A R + S D + ++L + FAAV EG +F F I Sbjct: 171 --VVPEINAKIQMANRRLESILRSDIDLTDPDQLNNFILAYIFFAAVFEGCWFYNGFSPI 228 Query: 373 FWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE--RVPAERIHSMIRDAVEC 430 F L++RGLM G + I RDE +HC F S + E + + I +M +A E Sbjct: 229 FALQRRGLMKGTAEQLQYIMRDETMHCAFGIQTVSQIIIENCTNIDVDAIKTMWEEADEA 288 Query: 431 EKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNP-----FDWM-ELI 484 E + L ++G + F+A+R +LG + P P W+ E Sbjct: 289 EANYARYILREPILGYSANDHIEQFRFIANRRARQLGLEE----PFPQAKCALPWLDEQA 344 Query: 485 SLQGKTNFFEKRVGEYQ 501 +++ + NFFE RV EYQ Sbjct: 345 NIRKEKNFFETRVIEYQ 361
ref|YP_053065.1| ribonucleotide reductase RR2 [Equid herpesvirus 1] gb|AAT67277.1| ribonucleotide reductase RR2 [Equine herpesvirus 1] pir||WMBEA1 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - equine herpesvirus 1 (strain Ab4p) gb|AAS45904.1| small subunit of ribonucleotide reductase [Equine herpesvirus 1] sp|P28847|RIR2_EHV1B Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (321 aa) Score: 112 bits (280), Expect: 2.44306e-23 Length: 291, Idn/Pos/Gap = 84/141/12 (28%/48%/4%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LE 273 P I VA+ W ++ ++ D+ +LT AER F + AF +A+D +V L Sbjct: 28 PDIEHLRSLSVANRWLDTDLPISDDLKD-VAKLTPAEREFYRFLFAFLSAADDLVNLNLG 86 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPC 332 +L+ F + + +Y Q ++E HS YS + + + D R ++ Sbjct: 87 DLSALFTQK----DILHYYIEQESIEVTHSRVYSAIQLMLFGNDAAARARYVASIIGDAA 142 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 + RK W + S E+ + +EG+FF+ SF +I +L+ L SN+LIS Sbjct: 143 IGRKVAWLQAKVRECGSVAEKYILMILIEGLFFASSFASIAYLRTHNLFVVTCQSNDLIS 202 Query: 393 RDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLM 451 RDE +H +C +Y + L E+ +RI+ + +AV E EF+ P ++ + Sbjct: 203 RDEAIHTRASCCIYNNYLGGFEKPEPKRIYELFSEAVNIECEFLLSHAPQYSHLLDIGAI 262 Query: 452 SAYIEFVADRLLVELGYDRLWNTPNPFDWMEL--ISLQGKTNFFEKRVGEY 500 +Y+ + ADRLL E+G L+N P P L ++++ TNFFE+R Y Sbjct: 263 ISYVRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMTVEKHTNFFERRSTAY 313
ref|NP_045237.1| 20 [Equid herpesvirus 4] gb|AAC59535.1| 20 [Equine herpesvirus 4] pir||T42563 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - equine herpesvirus 4 (strain NS80567) (320 aa) Score: 112 bits (280), Expect: 3.13793e-23 Length: 291, Idn/Pos/Gap = 83/141/12 (28%/48%/4%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LE 273 P I VA+ W ++ ++ D+ +L AER F + AF +A+D +V L Sbjct: 27 PDIEHLRLLSVANRWLDTDLPISDDLKD-VAKLAPAEREFYRFLFAFLSAADDLVNLNLG 85 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPC 332 +L+ F + + +Y Q ++E HS YS + + + D R ++ Sbjct: 86 DLSALFTQK----DILHYYIEQESIEVTHSRVYSAIQLMLFGNDATARARYVASVVKDVA 141 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 + K W + S E+ + +EG+FF+ SF +I +L+ L SN+LIS Sbjct: 142 IDLKVSWLQAKVRECKSVAEKYILMILIEGVFFASSFASIAYLRTHNLFVVTCQSNDLIS 201 Query: 393 RDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLM 451 RDE +H + +C +Y + L E+ RI+++ +AV E EF+ P S ++ + + Sbjct: 202 RDEAIHTNASCCIYNNYLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPKSTHLLDIEAI 261 Query: 452 SAYIEFVADRLLVELGYDRLWNTPNPFDWMEL--ISLQGKTNFFEKRVGEY 500 Y+ + ADRLL E+G L+N P P L ++++ TNFFE+R Y Sbjct: 262 ICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAY 312
emb|CAF87761.1| unnamed protein product [Tetraodon nigroviridis] (441 aa) Score: 112 bits (279), Expect: 3.55629e-23 Length: 73, Idn/Pos/Gap = 48/62/0 (65%/84%/0%) Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRK 336 ERF ++V++ EARCFYGFQIAMENIHSE YSLLID Y+K+P ER +LF A+ET+PCV++K Sbjct: 235 ERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKKK 294 Query: 337 AYWAIRWIGSDAS 349 A WA+ WIG+ + Sbjct: 295 ADWALNWIGNQKA 307
ref|NP_419079.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter crescentus CB15] gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter crescentus CB15] pir||C87281 hypothetical protein CC0260 [imported] - Caulobacter crescentus (347 aa) Score: 112 bits (279), Expect: 3.61614e-23 Length: 299, Idn/Pos/Gap = 88/127/11 (29%/42%/3%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P ++P ++F+K+ W EE+ L D+ W +L + ER ++ + FF SD V Sbjct: 21 PFRYPWAYDFWKKQQQVHWMPEEVPLGEDLKDWAVKLNDKERNLLTQIFRFFTQSDVEVQ 80 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPC 332 +N ER+ R + E + ME IH Y+LL++ + PE F E M Sbjct: 81 DNYMERYGRVFKPTEVKMMLASFANMETIHIAAYALLLET-IGMPETEFSAFMEYEAMKA 139 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 + Y + S+A L F EG+ SF + + M G+ Sbjct: 140 --KHDYMQTFGVDSNADICRTLAMFGGFTEGLQLFASFAMLMNFPRFNKMKGMGQIVSWS 197 Query: 392 SRDEGLHCDFACHLYSMLPAE----ERVPAERIHSMIRDAVECEKEFVCDALPVSLI-GM 446 RDE LHCD LY E + A+ I + V E F+ A I GM Sbjct: 198 IRDESLHCDGIIKLYHAFNKETGAVTKAVADDIVDCCKTVVGMEDNFIDLAFEAGDIQGM 257 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTP-NPFDWME-LISLQGKTNFFEKRVGEYQKA 503 + AYI FVAD L +L ++ NP W++ L+S NFFE R EY KA Sbjct: 258 TPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANFFEARATEYSKA 316
dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2] dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3] dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2] ref|NP_066872.1| UL40 protein [Gallid herpesvirus 3] (353 aa) Score: 112 bits (279), Expect: 3.80178e-23 Length: 299, Idn/Pos/Gap = 84/140/6 (28%/46%/2%) Query: 205 EADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFF 264 + RY P + P I + + WT E +A D+ +L+E E+ F + F Sbjct: 50 KVSRYFYVP-ECPDIGHLRALSIMNRWTETEFVVAEDLGD-VAKLSEEEKNFYRFLFTFL 107 Query: 265 AASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHL 323 +A+D +V N+ + + E + +Y Q +E +HS YS++ + + D R Sbjct: 108 SAADDLVNLNI-DNLLGLFEQKDIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSSARAKY 166 Query: 324 FRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 ++ P ++ K W R I S E+ + EGIFFS SF I +L+ L Sbjct: 167 VQSALESPVIQSKLEWLDRRILECTSIPEKYILMILTEGIFFSASFARIAYLRTNNLFVV 226 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 N LISRDE +H + +C ++ A + RI ++ +AV+ E F+ A P Sbjct: 227 TCQINNLISRDEAIHVEASCCIFKNYIAGNKPSTARIQALFSEAVDLECAFLRAAAPRDS 286 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNP-FDW-MELISLQGKTNFFEKRVGEY 500 ++ + +Y+ + ADRLL L ++ P+P D+ + L+S TNFFE+R Y Sbjct: 287 RLLDIGSICSYVRYSADRLLRMLDVPPIYGEPSPAADFPLSLMSASNNTNFFERRSTAY 345
emb|CAA53101.1| ribonucleoside-diphosphate reductase; ribonucleotide reductase small subunit [Equine herpesvirus 4] sp|P50644|RIR2_EHV4 Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (320 aa) Score: 111 bits (278), Expect: 4.68358e-23 Length: 291, Idn/Pos/Gap = 83/141/12 (28%/48%/4%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIV---LE 273 P I VA+ W ++ ++ D+ +L AER F + AF +A+D +V L Sbjct: 27 PDIEHLRLLSVANRWLDTDLPISDDLKD-VAKLAPAEREFYRFLFAFLSAADDLVNLNLG 85 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPC 332 +L+ F + + +Y Q ++E HS YS + + + D R ++ Sbjct: 86 DLSALFTQK----DILHYYIEQESIEVTHSRVYSAIQLMLFGNDATARARYVASVVKDVA 141 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 + K W + S E+ + +EG+FF+ SF +I +L+ L SN+LIS Sbjct: 142 IDLKVSWLQAKVRECKSVAEKYILMILIEGVFFASSFASIAYLRTHNLFVVTCQSNDLIS 201 Query: 393 RDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLM 451 RDE +H + +C +Y + L E+ RI+++ +AV E EF+ P S ++ + + Sbjct: 202 RDEAIHTNASCCIYNNYLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPKSSHLLDIEAI 261 Query: 452 SAYIEFVADRLLVELGYDRLWNTPNPFDWMEL--ISLQGKTNFFEKRVGEY 500 Y+ + ADRLL E+G L+N P P L ++++ TNFFE+R Y Sbjct: 262 ICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTAY 312
gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct] (445 aa) Score: 111 bits (278), Expect: 4.76239e-23 Length: 320, Idn/Pos/Gap = 92/143/36 (28%/44%/11%) Query: 210 TLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRN-RLTEAERYFVSHVLAFFAASD 268 T P +P + +H + W +EIDL+ D+ W+N ++T+ E+ +++++L F SD Sbjct: 125 TYKPFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSD 184 Query: 269 GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAME 328 V +N ++F+ + E R G A E IH Y+LL D + P+ H F + Sbjct: 185 VAVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDT-LGLPDSEYHAFLEYK 243 Query: 329 TM-----------PCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKK 377 M P RR + + F E + FA SF + ++ Sbjct: 244 AMTDKIDFMMDADPTTRRGLGLCL----AKTVFNEGVALFA---------SFAMLLNFQR 290 Query: 378 RGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMIRDAVECEK 432 G M G+ E RDE +H + L+ + E + + I+ M AVE E Sbjct: 291 FGKMKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELED 350 Query: 433 EFVCDALPVSLI-GMNQQLMSAYIEFVADRLLVELGYDRLWNT-PNPFDWMELISLQG-- 488 F+ A + I G+ + YI + DR L +LG ++N NP W+E I L G Sbjct: 351 RFIELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWI-LNGAD 409 Query: 489 KTNFFEKRVGEYQKANVTTS 508 TNFFE RV EY+ A +T S Sbjct: 410 HTNFFENRVTEYEVAGLTGS 429
ref|YP_169561.1| Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis Schu 4] emb|CAG45165.1| Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit [Francisella tularensis subsp. tularensis SCHU S4] (410 aa) Score: 111 bits (277), Expect: 6.01571e-23 Length: 320, Idn/Pos/Gap = 92/143/36 (28%/44%/11%) Query: 210 TLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRN-RLTEAERYFVSHVLAFFAASD 268 T P +P + +H + W +EIDL+ D+ W+N ++T+ E+ +++++L F SD Sbjct: 99 TYKPFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSD 158 Query: 269 GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAME 328 V +N ++F+ + E R G A E IH Y+LL D + P+ H F + Sbjct: 159 VAVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDT-LGLPDSEYHAFLEYK 217 Query: 329 TM-----------PCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKK 377 M P RR + + F E + FA SF + ++ Sbjct: 218 AMTDKIDFMMDADPTTRRGLGLCL----AKTVFNEGVALFA---------SFAMLLNFQR 264 Query: 378 RGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMIRDAVECEK 432 G M G+ E RDE +H + L+ + E + + I+ M AVE E Sbjct: 265 FGKMKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELED 324 Query: 433 EFVCDALPVSLI-GMNQQLMSAYIEFVADRLLVELGYDRLWNT-PNPFDWMELISLQG-- 488 F+ A + I G+ + YI + DR L +LG ++N NP W+E I L G Sbjct: 325 RFIELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWI-LNGAD 383 Query: 489 KTNFFEKRVGEYQKANVTTS 508 TNFFE RV EY+ A +T S Sbjct: 384 HTNFFENRVTEYEVAGLTGS 403
ref|NP_040141.1| ribonucleotide reductase (small subunit) [Human herpesvirus 3 (strain Dumas)] emb|CAA27901.1| ribonucleotide reductase (small subunit) [Human herpesvirus 3 (strain Dumas)] gb|AAT07700.1| ribonucleotide reductase small subunit [Human herpesvirus 3] gb|AAT07776.1| ribonucleotide reductase small subunit [Human herpesvirus 3] pir||WMBE18 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - human herpesvirus 3 sp|P09247|RIR2_VZVD Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (306 aa) Score: 110 bits (276), Expect: 7.92259e-23 Length: 289, Idn/Pos/Gap = 83/135/11 (28%/46%/3%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 P I +++ W + + D + + LTE E F + F +A+D +V NL Sbjct: 16 PDINNLRALSISNRWLESDFIIEDDY-QYLDCLTEDELIFYRFIFTFLSAADDLVNVNLG 74 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMETMPCVRR 335 + + +Y Q +E +H+ YS + + + D R P +++ Sbjct: 75 S-LTQLFSQKDIHHYYIEQECIEVVHARVYSQIQLMLFRGDESLRVQYVNVTINNPSIQQ 133 Query: 336 KAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 395 K W + + S E+ + +EGIFF SF AI +L+ GL N+LISRDE Sbjct: 134 KVQWLEEKVRDNPSVAEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRDE 193 Query: 396 GLHCDFACHLYSMLPAEERVPA-ERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAY 454 +H +C +Y+ E+ PA RIH + +AVE E F+ P + + +N ++ Y Sbjct: 194 AIHTSASCCIYNNYVPEK--PAITRIHQLFSEAVEIECAFLKSHAPKTRL-VNVDAITQY 250 Query: 455 IEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVGEY 500 ++F ADRLL + +L+NTP P F +I+ TNFFE+ Y Sbjct: 251 VKFSADRLLSAINVPKLFNTPPPDSDFPLAFMIA-DKNTNFFERHSTSY 298
ref|YP_062627.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli subsp. xyli str. CTCB07] gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli subsp. xyli str. CTCB07] (329 aa) Score: 110 bits (275), Expect: 9.59867e-23 Length: 313, Idn/Pos/Gap = 80/148/28 (25%/47%/8%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 L P+K+ + Y + VA+ W EI + D+ ++ ++T+ ER+ V+ ++++F ++ + Sbjct: 14 LKPVKYQWAMDLYDQAVANTWFPNEIQIGEDIADFK-KMTDEERHAVTFLMSYFNPNELL 72 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 V + LA + EA + Q+ E H ++ +++ + P +R + + + Sbjct: 73 VNKALAFGVYPYINAAEAHLYLAKQMWEEANHCMSFEYVLETF---PIDREQAYNSHVDV 129 Query: 331 PCVRRKAYWAIRWIG-------------SDASFQERLVAFAAV-EGIFFSGSFCAIFWLK 376 P + K + +R+I F L+A+ + EGI+F F + Sbjct: 130 PSMASKEEFEVRFIKRMTEQALDITTTEGKQDFIRNLIAYNVILEGIWFYSGFMVALSFR 189 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP-------AERIHSMIRDAVE 429 +R L+ + + RDE LH F +L +L E P A I MI DAVE Sbjct: 190 QRNLLRNFGSLIDWVVRDESLHLKFGINL--ILTVLEENPDLQTPEFAAEIKQMILDAVE 247 Query: 430 CEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGK 489 E+++ D LP ++G+N ++ Y++++ADR L ELG++ + NP WM + + Sbjct: 248 MEEQYNRDLLPGGILGLNANYINQYVKYLADRRLEELGFEAEYKVSNPAKWMATANDTLE 307 Query: 490 -TNFFEKRVGEYQ 501 NFFE Y+ Sbjct: 308 LVNFFESTNTSYE 320
emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi] (87 aa) Score: 110 bits (275), Expect: 1.14369e-22 Length: 87, Idn/Pos/Gap = 51/66/0 (58%/75%/0%) Query: 434 FVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFF 493 F+ +LP LIGMN +LMS YIEFVADRLL LG +++++ NPF WM+LISLQGKTNFF Sbjct: 1 FLVWSLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFSWMDLISLQGKTNFF 60 Query: 494 EKRVGEYQKANVTTSATDNVFALDIEF 520 EKRV +YQK+ V + VF+L+ +F Sbjct: 61 EKRVADYQKSGVMAQRKEQVFSLNTDF 87
ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1] gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1] (579 aa) Score: 110 bits (275), Expect: 1.17268e-22 Length: 304, Idn/Pos/Gap = 87/144/16 (28%/47%/5%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 D L P + ++ +F + +S W EID +D+ W +++E ER V VLAFFA Sbjct: 70 DHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWE-QISENERDCVRKVLAFFAV 128 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDP---EERTHL 323 D +V + +A F + +PE + F +Q E +H Y+ +DA VKD + + Sbjct: 129 GDTLVKDRIA-IFADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNA 187 Query: 324 FRAMETMPCVRRKAYWAIRWIG-SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 ++ E P +++K W + I + S E +V E I F+ SF AI + M Sbjct: 188 YKDPEFAP-IKKKVDWLGKIISVENDSRGEMVVGQVCTEAIMFAASF-AILLKFRAPYMR 245 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 442 L NE I RDE LH F L ++P +R ERI ++ +A E E EF +P Sbjct: 246 ALVLGNEFIRRDETLHFRFYAELLRLMP--DRPSDERIAELLTEATEIELEFAEYVVPEG 303 Query: 443 LIGMNQQLMSAYIEFVADRLLVELG-----YDRLWNT-PNPFDWMELISLQGKTNFFEKR 496 + + + + +++ +++ L +D+ N +P +M + + K NFFE + Sbjct: 304 VKYITKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNTLESEQKINFFEGK 363 Query: 497 VGEY 500 EY Sbjct: 364 ATEY 367
ref|YP_056787.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium acnes KPA171202] gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium acnes KPA171202] (328 aa) Score: 107 bits (267), Expect: 7.92489e-22 Length: 314, Idn/Pos/Gap = 83/145/30 (26%/46%/9%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 L P+ + ++ Y + VA+ W EI L D+ + R+T E + ++H++++F ++ + Sbjct: 13 LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFA-RMTPDEHHALTHLMSYFNPNELL 71 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 V + LA V E + Q+ E H + +++ + P +R +R+ + Sbjct: 72 VNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETF---PIDRDEAYRSHIHV 128 Query: 331 PCVRRKAYWAIRWIG-------------SDASFQERLVAFAAV-EGIFFSGSFCAIFWLK 376 P + RK + + +I F L+A+ + EGI+F F + Sbjct: 129 PSMARKEAFEVAFIKRMTEQTLDITTVEGKQDFVRNLIAYNIILEGIWFYSGFMVALSFR 188 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP-------AERIHSMIRDAVE 429 +R L+ + + RDE LH F +L +L E P A IH MI VE Sbjct: 189 QRNLLRNFGSLIDWVVRDESLHLKFGMNL--ILTVLEENPEIATDEFAAEIHDMIVQGVE 246 Query: 430 CEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELI--SLQ 487 E+++ D LP ++GMN ++ Y++++ADR L ELG++ + NP WM +LQ Sbjct: 247 MEEQYNRDMLPRGILGMNADYVNDYVKYLADRRLEELGFEPEYRVVNPAKWMATANDTLQ 306 Query: 488 GKTNFFEKRVGEYQ 501 NFFE Y+ Sbjct: 307 -VVNFFEATNTSYE 319
ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] ref|NP_966023.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] (329 aa) Score: 105 bits (262), Expect: 3.21933e-21 Length: 305, Idn/Pos/Gap = 83/143/19 (27%/46%/6%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P ++ + + W EE+ LA D+ W+ +L+ E+ ++ + FF +D I + Sbjct: 12 PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTKLSSVEKNLLTQIFRFFTQAD-IEV 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIA-MENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N R ++ P C + ME IH YS L+D + PE F + M Sbjct: 71 NNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDT-IGMPESEYQAFLKYDAM- 128 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSG-----SFCAIFWLKKRGLMPGLTF 386 R+K + + + S ++ + AV G F G SF + ++ G M G+ Sbjct: 129 --RKKYEYMLEFEESKKHDKKHVAKTLAVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQ 186 Query: 387 SNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMIRDAVECEKEFVCDALPV 441 +RDE LH + L++ E + E ++S R VE E EF+ A + Sbjct: 187 IIAWSARDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFIKLAFDL 246 Query: 442 SLI-GMNQQLMSAYIEFVADRLLVELGYDRLWN-TPNPFDWM-ELISLQGKTNFFEKRVG 498 + G++ + + YI +VA+R L++LG + +++ NP W+ E+++ TNFFE RV Sbjct: 247 GDVEGLSAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNFFENRVT 306 Query: 499 EYQKA 503 EY +A Sbjct: 307 EYSRA 311
emb|CAA70275.1| ribonucleotide reductase, small subunit [Murid herpesvirus 4] ref|NP_044898.1| ribonucleotide reductase small [Murid herpesvirus 4] gb|AAF19324.1| 60 [murid herpesvirus 4] gb|AAB66450.1| ribonucleotide reductase small [murid herpesvirus 4] (305 aa) Score: 105 bits (262), Expect: 3.58817e-21 Length: 296, Idn/Pos/Gap = 78/145/12 (26%/48%/4%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 L+ H E + W +I L++D+ +L E +R F + F ++ + Sbjct: 8 LYVSDHAGFLELTTETWKNMWFPSQIPLSSDVAGIA-QLNETDREFYKFLFVFLGLAERL 66 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVK-DPEERTHLFRAMET 329 V N+ E +++ +A +Y Q+AMENIH + Y+ ++ + D + + Sbjct: 67 VNFNI-EDLVKEFNCHDATHYYAEQMAMENIHGKVYANILQLFFNGDMMKLKEYAVKVVA 125 Query: 330 MPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 P ++ K W + + + E+++ F +EGIFF SF +I + RG++ G+ +N+ Sbjct: 126 DPTLKAKLDWLHTRVKNTKTRAEKVLIFLLIEGIFFISSFYSISLFRVRGMLNGICLAND 185 Query: 390 LISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFV-CDALPVSLIGMN 447 IS+DE LH A LY S++PA+ER A I + ++AVE E F+ + V+L+ Sbjct: 186 YISKDELLHTRAAAVLYNSLIPAKERPDAAWIKRLFQEAVEVEYSFIAAKSKNVTLVVPG 245 Query: 448 QQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQG---KTNFFEKRVGEY 500 + + +++ DR+L +G + ++ + P +S G NFFE+ +Y Sbjct: 246 E--IKKFLQATCDRILQSIGVEPIYGSHAPVTCP--LSYNGCIKSVNFFEREGTDY 297
gb|AAG27191.1| ribonucleotide reductase, small subunit [Cercopithecine herpesvirus 7] ref|NP_077433.1| ribonucleotide reductase, small subunit [Cercopithecine herpesvirus 7] (311 aa) Score: 105 bits (262), Expect: 3.77237e-21 Length: 297, Idn/Pos/Gap = 80/137/6 (26%/46%/2%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 + ++ P I E +++ W + L D + + LTE E F + F +A+D + Sbjct: 12 FYSLECPDINELRSLSISNRWLETDFTLEDDYQYIKC-LTEEELSFYKFIFTFLSAADDL 70 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFRAMET 329 V N+ + + + +Y Q +E +HS YS + + + D ER A Sbjct: 71 VNVNIGS-LITLFKQKDIHHYYLEQECIEVVHSRIYSQIQLMLFEGDIFERLRYTEATIQ 129 Query: 330 MPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 ++ K W + + E+ + +EGIFF+ SF AI + + GL + N+ Sbjct: 130 DAYIKAKVDWLEYNVQMNPLIGEKYILMIIIEGIFFTSSFAAISYFRNNGLFVVMCQLND 189 Query: 390 LISRDEGLHCDFACHLYSMLPAEERVPA-ERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 LISRDE +H +C +Y+ + + PA RIH + +AV E F+ P + +N Sbjct: 190 LISRDEAVHTSASCCIYNNYISYKEKPAIPRIHQLFMEAVNIECNFISAYAPKNQRIINI 249 Query: 449 QLMSAYIEFVADRLLVELGYDRLWNTPNP-FDW-MELISLQGKTNFFEKRVGEYQKA 503 + Y+ + ADRLL + L+N P P D+ + ++ + TNFFE+ Y A Sbjct: 250 DAILQYVRYNADRLLSAINIPVLFNAPAPKADFPLAFMTAEKHTNFFERHSTAYTGA 306
gb|AAB62659.1| ORF 60, ribonucleotide reductase small subunit homolog [Human herpesvirus 8] gb|AAC57145.1| ORF 60; ribonucleotide reductase, small subunit RR2 homolog; EBV BaRF1 homolog [Human herpesvirus 8] ref|NP_572116.1| ORF 60; ribonucleotide reductase, small subunit RR2 homolog; EBV BaRF1 homolog [Human herpesvirus 8] (305 aa) Score: 105 bits (261), Expect: 4.57045e-21 Length: 316, Idn/Pos/Gap = 84/152/18 (26%/48%/5%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 + DR+ L+ H + + W +I L D+ H ++L++A++ F + F Sbjct: 2 DSVDRF-LYTSDHDGFLALTRETWQNRWFPSQIPLHLDVSH-VHQLSDADKDFYRFLFTF 59 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 ++ +V N+ E + + + +Y Q+AMENIH Y+ ++ + + Sbjct: 60 LGMAERLVNFNI-EDLVTNFNSHDVAHYYAEQVAMENIHGVVYANILKIFFNNSRGELLA 118 Query: 324 FRAMETM-PCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 + A + P + K W + + ++++ F VEGI+F SF +I + RG+MP Sbjct: 119 YAAKIILDPALCEKLEWLHSRVRKATTKAQKILMFLIVEGIYFISSFYSISLCRVRGIMP 178 Query: 383 GLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFV-CDALP 440 G+ +N+ ISRDE LH A LY +M+ +E+ + ++ R+AV E F+ A Sbjct: 179 GVCLANDYISRDELLHTKAASMLYNTMVEIQEKPSHAEVQALFREAVNIEIRFIQAKAAG 238 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGK---TNFFEKRV 497 V+L+ N + ++E ADR+L ++ ++ TP P +S G NFFE+ Sbjct: 239 VTLV--NVVDIRRFLEATADRILRDIFVPPIFGTPPPEACP--LSYTGSFKAVNFFERDN 294 Query: 498 GEYQKANVTTSATDNV 513 +Y TT TD++ Sbjct: 295 SDY-----TTCVTDDL 305
gb|AAK07979.1| ribonucleotide reductase small subunit [Bovine herpesvirus 4] ref|NP_076552.1| ribonucleotide reductase small subunit [Bovine herpesvirus 4] (305 aa) Score: 104 bits (260), Expect: 5.53735e-21 Length: 256, Idn/Pos/Gap = 72/130/7 (28%/50%/2%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 L+ H + + W ++ L D++H ++ L +R F + F ++ + Sbjct: 8 LYSCDHQGFLKLLHETWQNRWFPSQVSLHGDVNHLKS-LNVQDREFYKFLFTFLGMAESL 66 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVK-DPEERTHLFRAMET 329 V N+ E ++ E + +Y Q+AMENIH+ Y +++ + DP E + + Sbjct: 67 VNFNI-EDIIKQFESHDMLHYYTEQMAMENIHARMYENILNMFFNNDPAEMYRYTQMIIN 125 Query: 330 MPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 + RK W I S ++ E+++ F VEGIFF SF +I L+ RG+ G+ +N+ Sbjct: 126 DRALIRKLDWLHSRIKSVSNKAEKVLLFLLVEGIFFVSSFYSIGLLRVRGMFNGVCLAND 185 Query: 390 LISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFV-CDALPVSLIGMN 447 ISRDE LH A LY +M+ ++ +H++ ++AVE E EF+ + VS + ++ Sbjct: 186 YISRDELLHTRAAALLYNTMVSGADKPHMLWVHNLFKEAVEVEHEFILVKSSGVSAVNVD 245 Query: 448 QQLMSAYIEFVADRLL 463 + +++E ADR+L Sbjct: 246 D--IRSFLEATADRIL 259
ref|NP_570808.1| small ribonucleotide reductase [Cercopithecine herpesvirus 17] gb|AAD21394.1| small ribonucleotide reductase [Macaca mulatta rhadinovirus 17577] (314 aa) Score: 103 bits (256), Expect: 1.58446e-20 Length: 304, Idn/Pos/Gap = 79/145/16 (25%/47%/5%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E DR+ L+ HP + + W +I L D D R L+ +R F + F Sbjct: 12 ESPDRF-LYASDHPGFLALTQETWQNRWFPSQISLHEDSDEVR-LLSPTDREFYQFLFTF 69 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 ++ +V N+ E +++ + +Y Q+AMENIH + Y+ +++ + + Sbjct: 70 LGMAESLVNFNI-EDLVKEFSNHDVTHYYAEQVAMENIHGKVYANILNLFFGGNRGDLMI 128 Query: 324 F-RAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 + + + + +K W + + E+++ F +EGI+F SF +I + RG+M Sbjct: 129 YAKKIVEDATLAKKIDWLHSRVRKATTRAEKVLLFLVIEGIYFISSFYSIGLFRLRGIMR 188 Query: 383 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPA-ERIHSMIRDAVECEKEFV-CDALP 440 G+ +N+ ISRDE LH A LY+ + + + P+ IH + R+AVE E F+ + Sbjct: 189 GVCLANDYISRDELLHTRAASLLYNTMISRDESPSVAYIHGLFREAVEIETLFIRSKSRD 248 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT--PN--PFDWMELISLQGKTNFFEKR 496 V+++ + + +++ ADR+L + L+ PN P + S+ NFFE+ Sbjct: 249 VTMVNVGD--IEQFLQATADRILKSINIPPLFGARPPNACPLSYTSAKSV----NFFERD 302 Query: 497 VGEY 500 EY Sbjct: 303 NSEY 306
gb|AAF60046.1| small ribonuclease reductase [Macaca mulatta rhadinovirus 26-95] (304 aa) Score: 103 bits (256), Expect: 1.87221e-20 Length: 304, Idn/Pos/Gap = 80/144/16 (26%/47%/5%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E DR+ L+ HP + + W +I L D D R L+ +R F + F Sbjct: 2 ESPDRF-LYASDHPGFLALTQETWQNRWFPSQISLHEDSDEVR-LLSPTDREFYQFLFTF 59 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHL 323 ++ +V N+ E +++ + +Y Q+AMENIH + Y+ +++ + + Sbjct: 60 LGMAESLVNFNI-EDLVKEFSNHDVTHYYAEQVAMENIHGKVYANILNLFFGGNRGDLMI 118 Query: 324 F-RAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 + + + + +K W + + E+++ F +EGI+F SF +I + RG+M Sbjct: 119 YAKKIVEDATLAKKIDWLHSRVRKATTRAEKVLLFLVIEGIYFISSFYSIGLFRLRGIMR 178 Query: 383 GLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFV-CDALP 440 G+ +N+ ISRDE LH A LY +M+ +E IH + R+AVE E F+ + Sbjct: 179 GVCLANDYISRDELLHTRAASLLYNTMISRDESPSVAYIHGLFREAVEIETLFIRSKSRD 238 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT--PN--PFDWMELISLQGKTNFFEKR 496 V+++ + + +++ ADR+L + L+ PN P + S+ NFFE+ Sbjct: 239 VTMVNVGD--IEQFLQATADRILKSINIPPLFGARPPNACPLSYTSAKSV----NFFERD 292 Query: 497 VGEY 500 EY Sbjct: 293 NSEY 296
ref|NP_042657.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2] gb|AAC13848.1| ribonucleotide reductase, small subunit pir||S55655 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - equine herpesvirus 2 (305 aa) Score: 102 bits (254), Expect: 3.14066e-20 Length: 285, Idn/Pos/Gap = 80/141/12 (28%/49%/4%) Query: 231 WTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARC 290 W +I L +D+ ++ L + F + +F A ++ +V N+ + + D + Sbjct: 28 WFPSQISLTSDVACLQS-LNPRDLEFYKFLFSFLAMAEKLVNFNI-QALVADFHSHDLEH 85 Query: 291 FYGFQIAMENIHSETYSLLIDAYVKDP-EERTHLFRAMETMPCVRRKAYWAIRWIGSDAS 349 +Y Q AMENIH + Y+ +++ + K+ E R + + K +W + + Sbjct: 86 YYTEQEAMENIHGKVYANILNMFFKNNVGEMQKYAREIVGDEALAAKLHWLHGRVSEAKT 145 Query: 350 FQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLY-SM 408 E+++ F +EGIFF SF +I L+ RGLM G+ +N+ ISRDE +H A L+ ++ Sbjct: 146 RAEKVLVFLLIEGIFFISSFYSIATLRVRGLMNGVCMANDYISRDEWVHTRAAALLFNTL 205 Query: 409 LPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGY 468 +P EE+ E I ++ R+AVE E F+ A + +N ++ ++E ADR+L + Sbjct: 206 VPDEEKPSPEWIGALFREAVEVEYNFIL-AKGRGVSHVNVADINRFLEATADRILKSINV 264 Query: 469 DRLWNT-PNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDN 512 ++ T P P + NFFE+ +Y T+A DN Sbjct: 265 GPVYGTQPPPNCPLVYTGCLKNVNFFERESSDY------TTAVDN 303
gb|AAT00095.1| JM118 [Macaca fuscata rhadinovirus] (314 aa) Score: 101 bits (252), Expect: 4.3124e-20 Length: 305, Idn/Pos/Gap = 81/147/18 (26%/48%/5%) Query: 204 EEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAF 263 E DR+ L+ HP + + W +I L D D R L+ +R F + F Sbjct: 12 ESPDRF-LYASDHPGFLALTQETWQNRWFPSQISLHEDSDEVR-LLSPTDREFYQFLFTF 69 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYV--KDPEERT 321 ++ +V N+ E +++ + +Y Q+AMENIH + Y+ +++ + + T Sbjct: 70 LGMAESLVNFNI-EDLVKEFSNHDVTHYYAEQVAMENIHGKVYANILNLFFGGNRGDLMT 128 Query: 322 HLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLM 381 + + +E + +K W + + E+++ F +EGI+F SF +I + RG+M Sbjct: 129 YAKKIVED-ATLAKKIDWLHSRVRKATTRAEKVLLFLVIEGIYFISSFYSIGLFRLRGVM 187 Query: 382 PGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPA-ERIHSMIRDAVECEKEFV-CDAL 439 G+ +N+ ISRDE LH A LY+ + + + P+ IH + R+AVE E F+ + Sbjct: 188 RGVCLANDYISRDELLHTRAAGLLYNTMISRDESPSVAYIHGLFREAVEIETLFIRSKSR 247 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT--PN--PFDWMELISLQGKTNFFEK 495 V+++ + + +++ ADR+L + L+ PN P + S+ NFFE+ Sbjct: 248 GVTMVNVGD--IEQFLQATADRILKSINVPPLFGARPPNACPLSYTSAKSV----NFFER 301 Query: 496 RVGEY 500 EY Sbjct: 302 DNSEY 306
ref|NP_044642.1| ribonucleotide reductase small subunit [Human herpesvirus 1] emb|CAA32303.1| ribonucleotide reductase small subunit [Human herpesvirus 1] pir||WMBES7 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - human herpesvirus 1 (strain 17) sp|P10224|RIR2_HHV11 Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (38 kDa subunit) (340 aa) Score: 100 bits (250), Expect: 8.98669e-20 Length: 314, Idn/Pos/Gap = 91/148/12 (28%/47%/3%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 I K + +RY + + P I + + W E+ D + ++L+E E F Sbjct: 28 IPKCPDPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRF 85 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPE 318 + AF +A+D +V ENL E + +Y Q +E +HS Y+++ + + + + Sbjct: 86 LFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQ 144 Query: 319 ERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKR 378 R P +R K W + AS E+ + +EGIFF+ SF AI +L+ Sbjct: 145 ARREYVAGTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTN 204 Query: 379 GLMPGLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCD 437 L+ SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ Sbjct: 205 NLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRS 264 Query: 438 ALPVSLIGMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTN 491 P ++ ++A Y+ F ADRLL + L++ P P F + L+S TN Sbjct: 265 QAPTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTN 323 Query: 492 FFEKRVGEYQKANV 505 FFE R Y A V Sbjct: 324 FFECRSTSYAGAVV 337
ref|ZP_00269304.1| COG0208: Ribonucleotide reductase, beta subunit [Rhodospirillum rubrum] (358 aa) Score: 100 bits (249), Expect: 1.0443e-19 Length: 312, Idn/Pos/Gap = 87/136/29 (27%/43%/9%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHW-RNRLTEAERYFVSHVLAFFAASDGIVLE 273 ++P +EF+K+ W EE+ L D+ W +R+++ ER ++ + FF SD V + Sbjct: 30 RYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDRVSDQERNLLTQIFRFFTQSDVEVSD 89 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 N +R+M + E + ME IH + Y+LL+ E F A + Sbjct: 90 NYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTLGMPRTE----FSAFRDYAAM 145 Query: 334 RRKA-YWAIRWIGSDASFQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 R KA Y +G+ A L F A EG+ SF + + M G+ Sbjct: 146 RDKADYMHTFGVGTMADVSRTLAMFGAFTEGMALFASFAMLLNFPRHNKMKGMGQIVTWS 205 Query: 392 SRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA----VECEKEFVCDALPVSLI-GM 446 RDE LHC L+ E + + I D V E++FV A + I GM Sbjct: 206 VRDESLHCQGIIRLFHEWNRETGALTKPVRDDILDVATTMVGLEEKFVDLAFELGAIEGM 265 Query: 447 NQQLMSAYIEFVADRLLVEL--------------GYDRLWNTPNPFDWM-ELISLQGKTN 491 + + +Y+ +VAD L +L GY++L P+P W+ E+++ N Sbjct: 266 RAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQL--RPHPLPWLVEILNGVEHAN 323 Query: 492 FFEKRVGEYQKA 503 FFE+R EY KA Sbjct: 324 FFEQRSTEYSKA 335
dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium perfringens str. 13] ref|NP_563276.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium perfringens str. 13] (344 aa) Score: 100 bits (248), Expect: 1.26523e-19 Length: 309, Idn/Pos/Gap = 81/150/26 (26%/48%/8%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 +K+ + E+Y++ + +FW EEI+LA D+ ++ +LT+ E+ +L+F D I Sbjct: 36 MKYTWVSEWYRQAMNNFWIPEEINLAQDLKDYK-KLTKEEKTAYDKILSFLIFLDSIQTA 94 Query: 274 NLAE--RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH-LFRAMETM 330 NL ++ E+ FQ E +HS++YS ++D+ + PEER LF+ + Sbjct: 95 NLGNINSYITASEVNLCLTIQAFQ---EAVHSQSYSYMLDS-ICSPEERNEILFQWKDDA 150 Query: 331 PCVRRKAYWAIRW-----IGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 ++R + + S +F + ++A +EG++F F + L++ G MPG Sbjct: 151 ILLQRNKFIGDLYNNFLEDSSMENFIKSVMANYILEGVYFYSGFMFFYNLERNGKMPGSA 210 Query: 386 FSNELISRDEGLHCDFACHLYSMLPAEERVP-------AERIHSMIRDAVECEKEFVCDA 438 I+RDE H + L +E +P E + M+R VE E + Sbjct: 211 QEIRYINRDENTHLWLFRSIIKEL--KEEIPEVFTKELKEELREMVRTGVEHEIAWGHYV 268 Query: 439 LPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNPFDWMELI--SLQGKTNFFE 494 + ++ G+N+ L+ YI+++ + + +G + L+ NP W++ + Q KT+FFE Sbjct: 269 IGDNVTGINKNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTDFFE 328 Query: 495 KRVGEYQKA 503 + Y KA Sbjct: 329 AKSTAYAKA 337
gb|AAP39174.1| UL40 [Human herpesvirus 1] (307 aa) Score: 100 bits (248), Expect: 1.5982e-19 Length: 307, Idn/Pos/Gap = 89/146/12 (28%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ + Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVIC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
gb|AAP39218.1| UL40 [Human herpesvirus 1] gb|AAP39214.1| UL40 [Human herpesvirus 1] (307 aa) Score: 99 bits (247), Expect: 1.79623e-19 Length: 307, Idn/Pos/Gap = 90/145/12 (29%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P ER++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPERVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
ref|NP_349870.1| Ribonucleotide reductase beta subunit [Clostridium acetobutylicum ATCC 824] gb|AAK81210.1| Ribonucleotide reductase beta subunit [Clostridium acetobutylicum ATCC 824] pir||G97302 ribonucleotide reductase beta chain [imported] - Clostridium acetobutylicum (344 aa) Score: 99 bits (246), Expect: 2.42557e-19 Length: 313, Idn/Pos/Gap = 79/152/32 (25%/48%/10%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 +K+ + ++Y++ + +FW EEI+L+ D+ + +LT+ ER +L+F D + Sbjct: 36 MKYTWVSDWYRQGMNNFWIPEEINLSQDLKDY-GKLTDNERTAYDKILSFLIFLDSVQTA 94 Query: 274 NLAE--RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH-LFRAMETM 330 NL ++ E+ FQ E +HS++YS ++D + PE+R LF+ + Sbjct: 95 NLGNINDYITASEVNLCLTIQAFQ---EAVHSQSYSYMLDT-ICSPEKRNEILFQWKDDE 150 Query: 331 PCVRRKAYWAIRWIG----------SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGL 380 + R ++IG SD +F + ++ +EGI+F F + L++ G Sbjct: 151 VLLSRN-----KFIGDIYNNFVEEPSDENFLKAIMGNYVLEGIYFYSGFMFFYNLERNGK 205 Query: 381 MPGLTFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFV 435 MPG I+RDE H ++ L EE + + M++ VE E + Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWG 265 Query: 436 CDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNPFDWMELISLQG--KTN 491 + ++ G+N++L+ YI+++ +R L +G++ ++ NP W+++ + KT+ Sbjct: 266 HYVIGDNIQGINKKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTD 325 Query: 492 FFEKRVGEYQKAN 504 FFE + Y KA+ Sbjct: 326 FFEAKSTAYAKAS 338
gb|AAP39230.1| UL40 [Human herpesvirus 1] (307 aa) Score: 98 bits (245), Expect: 3.03845e-19 Length: 307, Idn/Pos/Gap = 89/145/12 (28%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRTKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
gb|AAP39226.1| UL40 [Human herpesvirus 1] (307 aa) Score: 98 bits (245), Expect: 3.16789e-19 Length: 307, Idn/Pos/Gap = 90/144/12 (29%/46%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P ER++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPERVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ + A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] ref|YP_198098.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] (331 aa) Score: 98 bits (245), Expect: 3.19443e-19 Length: 305, Idn/Pos/Gap = 81/140/19 (26%/45%/6%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P ++ + + W EE+ LA D+ W+ +L E+ ++ + FF +D I + Sbjct: 12 PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKIKLLNVEKNLLTQIFRFFTQAD-IEV 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIA-MENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N R ++ P C + ME IH YS L+D + PE F + M Sbjct: 71 NNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDT-IGMPESEYQAFLKYDAM- 128 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSG-----SFCAIFWLKKRGLMPGLTF 386 R+K + + + S ++ + AV G F G SF + ++ G M G+ Sbjct: 129 --RKKYEYMLEFEESKKHDKKHVAKTLAVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQ 186 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEERVP-----AERIHSMIRDAVECEKEFVCDALPV 441 +RDE LH + +L++ E E ++S R V E EF+ A + Sbjct: 187 IIAWSARDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFIKLAFDL 246 Query: 442 SLI-GMNQQLMSAYIEFVADRLLVELGYDRLWN-TPNPFDWM-ELISLQGKTNFFEKRVG 498 + G++ + + YI ++A+R L++LG +++ NP W+ E+++ TNFFE RV Sbjct: 247 GDVEGLSAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNFFENRVT 306 Query: 499 EYQKA 503 EY +A Sbjct: 307 EYSRA 311
gb|AAP39022.1| UL40 [Human herpesvirus 1] gb|AAP38982.1| UL40 [Human herpesvirus 1] gb|AAP38956.1| UL40 [Human herpesvirus 1] gb|AAP38954.1| UL40 [Human herpesvirus 1] gb|AAP38952.1| UL40 [Human herpesvirus 1] (307 aa) Score: 98 bits (245), Expect: 3.2212e-19 Length: 307, Idn/Pos/Gap = 89/145/12 (28%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLSGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
gb|AAP39000.1| UL40 [Human herpesvirus 1] (307 aa) Score: 98 bits (245), Expect: 3.2754e-19 Length: 307, Idn/Pos/Gap = 89/145/12 (28%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLYS-MLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y+ L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYTNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
gb|AAP39144.1| UL40 [Human herpesvirus 1] (307 aa) Score: 98 bits (245), Expect: 3.30284e-19 Length: 307, Idn/Pos/Gap = 89/145/12 (28%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSIINRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
gb|AAP39244.1| UL40 [Human herpesvirus 1] gb|AAP39242.1| UL40 [Human herpesvirus 1] gb|AAP39240.1| UL40 [Human herpesvirus 1] gb|AAP39238.1| UL40 [Human herpesvirus 1] gb|AAP39236.1| UL40 [Human herpesvirus 1] gb|AAP39234.1| UL40 [Human herpesvirus 1] gb|AAP39232.1| UL40 [Human herpesvirus 1] gb|AAP39228.1| UL40 [Human herpesvirus 1] gb|AAP39224.1| UL40 [Human herpesvirus 1] gb|AAP39222.1| UL40 [Human herpesvirus 1] gb|AAP39220.1| UL40 [Human herpesvirus 1] gb|AAP39216.1| UL40 [Human herpesvirus 1] gb|AAP39212.1| UL40 [Human herpesvirus 1] gb|AAP39210.1| UL40 [Human herpesvirus 1] gb|AAP39208.1| UL40 [Human herpesvirus 1] gb|AAP39206.1| UL40 [Human herpesvirus 1] gb|AAP39204.1| UL40 [Human herpesvirus 1] gb|AAP39202.1| UL40 [Human herpesvirus 1] gb|AAP39200.1| UL40 [Human herpesvirus 1] gb|AAP39198.1| UL40 [Human herpesvirus 1] gb|AAP39196.1| UL40 [Human herpesvirus 1] gb|AAP39194.1| UL40 [Human herpesvirus 1] gb|AAP39192.1| UL40 [Human herpesvirus 1] gb|AAP39188.1| UL40 [Human herpesvirus 1] gb|AAP39186.1| UL40 [Human herpesvirus 1] gb|AAP39184.1| UL40 [Human herpesvirus 1] gb|AAP39182.1| UL40 [Human herpesvirus 1] gb|AAP39180.1| UL40 [Human herpesvirus 1] gb|AAP39178.1| UL40 [Human herpesvirus 1] gb|AAP39176.1| UL40 [Human herpesvirus 1] gb|AAP39172.1| UL40 [Human herpesvirus 1] gb|AAP39170.1| UL40 [Human herpesvirus 1] gb|AAP39168.1| UL40 [Human herpesvirus 1] gb|AAP39166.1| UL40 [Human herpesvirus 1] gb|AAP39164.1| UL40 [Human herpesvirus 1] gb|AAP39162.1| UL40 [Human herpesvirus 1] gb|AAP39160.1| UL40 [Human herpesvirus 1] gb|AAP39156.1| UL40 [Human herpesvirus 1] gb|AAP39154.1| UL40 [Human herpesvirus 1] gb|AAP39152.1| UL40 [Human herpesvirus 1] gb|AAP39150.1| UL40 [Human herpesvirus 1] gb|AAP39148.1| UL40 [Human herpesvirus 1] gb|AAP39146.1| UL40 [Human herpesvirus 1] gb|AAP39140.1| UL40 [Human herpesvirus 1] gb|AAP39138.1| UL40 [Human herpesvirus 1] gb|AAP39136.1| UL40 [Human herpesvirus 1] gb|AAP39134.1| UL40 [Human herpesvirus 1] gb|AAP39132.1| UL40 [Human herpesvirus 1] gb|AAP39130.1| UL40 [Human herpesvirus 1] gb|AAP39128.1| UL40 [Human herpesvirus 1] gb|AAP39126.1| UL40 [Human herpesvirus 1] gb|AAP39124.1| UL40 [Human herpesvirus 1] gb|AAP39122.1| UL40 [Human herpesvirus 1] gb|AAP39120.1| UL40 [Human herpesvirus 1] gb|AAP39118.1| UL40 [Human herpesvirus 1] gb|AAP39116.1| UL40 [Human herpesvirus 1] gb|AAP39114.1| UL40 [Human herpesvirus 1] gb|AAP39112.1| UL40 [Human herpesvirus 1] gb|AAP39110.1| UL40 [Human herpesvirus 1] gb|AAP39106.1| UL40 [Human herpesvirus 1] gb|AAP39104.1| UL40 [Human herpesvirus 1] gb|AAP39102.1| UL40 [Human herpesvirus 1] gb|AAP39100.1| UL40 [Human herpesvirus 1] gb|AAP39098.1| UL40 [Human herpesvirus 1] gb|AAP39096.1| UL40 [Human herpesvirus 1] gb|AAP39094.1| UL40 [Human herpesvirus 1] gb|AAP39092.1| UL40 [Human herpesvirus 1] gb|AAP39090.1| UL40 [Human herpesvirus 1] gb|AAP39088.1| UL40 [Human herpesvirus 1] gb|AAP39086.1| UL40 [Human herpesvirus 1] gb|AAP39084.1| UL40 [Human herpesvirus 1] gb|AAP39082.1| UL40 [Human herpesvirus 1] gb|AAP39080.1| UL40 [Human herpesvirus 1] gb|AAP39078.1| UL40 [Human herpesvirus 1] gb|AAP39076.1| UL40 [Human herpesvirus 1] gb|AAP39074.1| UL40 [Human herpesvirus 1] gb|AAP39072.1| UL40 [Human herpesvirus 1] gb|AAP39070.1| UL40 [Human herpesvirus 1] gb|AAP39068.1| UL40 [Human herpesvirus 1] gb|AAP39066.1| UL40 [Human herpesvirus 1] gb|AAP39064.1| UL40 [Human herpesvirus 1] gb|AAP39062.1| UL40 [Human herpesvirus 1] gb|AAP39060.1| UL40 [Human herpesvirus 1] gb|AAP39058.1| UL40 [Human herpesvirus 1] gb|AAP39056.1| UL40 [Human herpesvirus 1] gb|AAP39054.1| UL40 [Human herpesvirus 1] gb|AAP39052.1| UL40 [Human herpesvirus 1] gb|AAP39050.1| UL40 [Human herpesvirus 1] gb|AAP39048.1| UL40 [Human herpesvirus 1] gb|AAP39046.1| UL40 [Human herpesvirus 1] gb|AAP39044.1| UL40 [Human herpesvirus 1] gb|AAP39042.1| UL40 [Human herpesvirus 1] gb|AAP39040.1| UL40 [Human herpesvirus 1] gb|AAP39038.1| UL40 [Human herpesvirus 1] gb|AAP39036.1| UL40 [Human herpesvirus 1] gb|AAP39034.1| UL40 [Human herpesvirus 1] gb|AAP39032.1| UL40 [Human herpesvirus 1] gb|AAP39030.1| UL40 [Human herpesvirus 1] gb|AAP39028.1| UL40 [Human herpesvirus 1] gb|AAP39026.1| UL40 [Human herpesvirus 1] gb|AAP39024.1| UL40 [Human herpesvirus 1] gb|AAP39020.1| UL40 [Human herpesvirus 1] gb|AAP39018.1| UL40 [Human herpesvirus 1] gb|AAP39016.1| UL40 [Human herpesvirus 1] gb|AAP39014.1| UL40 [Human herpesvirus 1] gb|AAP39012.1| UL40 [Human herpesvirus 1] gb|AAP39010.1| UL40 [Human herpesvirus 1] gb|AAP39008.1| UL40 [Human herpesvirus 1] gb|AAP39006.1| UL40 [Human herpesvirus 1] gb|AAP39004.1| UL40 [Human herpesvirus 1] gb|AAP39002.1| UL40 [Human herpesvirus 1] gb|AAP38998.1| UL40 [Human herpesvirus 1] gb|AAP38996.1| UL40 [Human herpesvirus 1] gb|AAP38994.1| UL40 [Human herpesvirus 1] gb|AAP38992.1| UL40 [Human herpesvirus 1] gb|AAP38990.1| UL40 [Human herpesvirus 1] gb|AAP38988.1| UL40 [Human herpesvirus 1] gb|AAP38986.1| UL40 [Human herpesvirus 1] gb|AAP38980.1| UL40 [Human herpesvirus 1] gb|AAP38978.1| UL40 [Human herpesvirus 1] gb|AAP38976.1| UL40 [Human herpesvirus 1] gb|AAP38974.1| UL40 [Human herpesvirus 1] gb|AAP38972.1| UL40 [Human herpesvirus 1] gb|AAP38970.1| UL40 [Human herpesvirus 1] gb|AAP38968.1| UL40 [Human herpesvirus 1] gb|AAP38966.1| UL40 [Human herpesvirus 1] gb|AAP38964.1| UL40 [Human herpesvirus 1] gb|AAP38962.1| UL40 [Human herpesvirus 1] gb|AAP38960.1| UL40 [Human herpesvirus 1] gb|AAP38950.1| UL40 [Human herpesvirus 1] gb|AAP38948.1| UL40 [Human herpesvirus 1] gb|AAP38946.1| UL40 [Human herpesvirus 1] gb|AAP38944.1| UL40 [Human herpesvirus 1] gb|AAP38942.1| UL40 [Human herpesvirus 1] gb|AAP38940.1| UL40 [Human herpesvirus 1] gb|AAP38938.1| UL40 [Human herpesvirus 1] gb|AAP38936.1| UL40 [Human herpesvirus 1] gb|AAP38934.1| UL40 [Human herpesvirus 1] gb|AAP38932.1| UL40 [Human herpesvirus 1] gb|AAP38930.1| UL40 [Human herpesvirus 1] gb|AAP38928.1| UL40 [Human herpesvirus 1] gb|AAP38926.1| UL40 [Human herpesvirus 1] gb|AAP38924.1| UL40 [Human herpesvirus 1] gb|AAP38922.1| UL40 [Human herpesvirus 1] gb|AAP38920.1| UL40 [Human herpesvirus 1] gb|AAP38918.1| UL40 [Human herpesvirus 1] gb|AAP38916.1| UL40 [Human herpesvirus 1] gb|AAP38914.1| UL40 [Human herpesvirus 1] gb|AAP38912.1| UL40 [Human herpesvirus 1] gb|AAP38910.1| UL40 [Human herpesvirus 1] gb|AAP38908.1| UL40 [Human herpesvirus 1] gb|AAP38906.1| UL40 [Human herpesvirus 1] gb|AAP38904.1| UL40 [Human herpesvirus 1] gb|AAP38902.1| UL40 [Human herpesvirus 1] gb|AAP38900.1| UL40 [Human herpesvirus 1] gb|AAP38898.1| UL40 [Human herpesvirus 1] gb|AAP38896.1| UL40 [Human herpesvirus 1] gb|AAP38894.1| UL40 [Human herpesvirus 1] gb|AAP38892.1| UL40 [Human herpesvirus 1] gb|AAP38890.1| UL40 [Human herpesvirus 1] gb|AAP38888.1| UL40 [Human herpesvirus 1] gb|AAP38886.1| UL40 [Human herpesvirus 1] gb|AAP38884.1| UL40 [Human herpesvirus 1] gb|AAP38882.1| UL40 [Human herpesvirus 1] gb|AAP38880.1| UL40 [Human herpesvirus 1] gb|AAP38878.1| UL40 [Human herpesvirus 1] gb|AAP38876.1| UL40 [Human herpesvirus 1] gb|AAP38874.1| UL40 [Human herpesvirus 1] gb|AAP38872.1| UL40 [Human herpesvirus 1] gb|AAP38870.1| UL40 [Human herpesvirus 1] gb|AAP38868.1| UL40 [Human herpesvirus 1] gb|AAP38866.1| UL40 [Human herpesvirus 1] gb|AAP38864.1| UL40 [Human herpesvirus 1] gb|AAP38862.1| UL40 [Human herpesvirus 1] gb|AAP38860.1| UL40 [Human herpesvirus 1] gb|AAP38858.1| UL40 [Human herpesvirus 1] gb|AAP38856.1| UL40 [Human herpesvirus 1] gb|AAP38854.1| UL40 [Human herpesvirus 1] gb|AAP38852.1| UL40 [Human herpesvirus 1] gb|AAP38850.1| UL40 [Human herpesvirus 1] gb|AAP38848.1| UL40 [Human herpesvirus 1] gb|AAP38846.1| UL40 [Human herpesvirus 1] gb|AAP38844.1| UL40 [Human herpesvirus 1] gb|AAP38842.1| UL40 [Human herpesvirus 1] gb|AAP38840.1| UL40 [Human herpesvirus 1] gb|AAP38838.1| UL40 [Human herpesvirus 1] gb|AAP38836.1| UL40 [Human herpesvirus 1] gb|AAP38834.1| UL40 [Human herpesvirus 1] gb|AAP38832.1| UL40 [Human herpesvirus 1] gb|AAP38830.1| UL40 [Human herpesvirus 1] gb|AAP38828.1| UL40 [Human herpesvirus 1] gb|AAP38826.1| UL40 [Human herpesvirus 1] (307 aa) Score: 98 bits (245), Expect: 3.41494e-19 Length: 307, Idn/Pos/Gap = 89/145/12 (28%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
ref|ZP_00375458.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis HTCC2594] gb|EAL76097.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis HTCC2594] (356 aa) Score: 98 bits (244), Expect: 4.20701e-19 Length: 306, Idn/Pos/Gap = 82/130/15 (26%/42%/4%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R T P ++P ++F+KR W EE+ L D W ++TE ER ++ + FF + Sbjct: 7 RKTYKPFEYPWAYDFWKRQQQIHWMPEEVPLGEDCRDWAQKITEHERNLLTQIFRFFTQA 66 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 D V + +++ R + E + ME +H YS L+D + PE F Sbjct: 67 DVEVQDCYHDKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDT-IGMPESEYSAFLEY 125 Query: 328 ETMPCVRRKAYWAIRWIGSDASFQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTF 386 E M + Y + + +D L F EG+ SF + + M G+ Sbjct: 126 EEMK--DKHDYLQLFGVDTDEDIARTLAVFGGFTEGMQLFASFAMLMNFPRFNKMKGMGQ 183 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEE----RVPAERIHSMIRDAVECEKEFVCDAL--- 439 RDE LHC+ L+ E + E I + + +V E F+ A Sbjct: 184 IVSWSVRDESLHCEGIVRLFHEFVRERDCYTKAVKEDIIDICQKSVRLEDNFIDLAFEMG 243 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPN-PFDWME-LISLQGKTNFFEKRV 497 PVS GM + + YI ++AD L +LG ++ + P W+ L++ NFFE+R Sbjct: 244 PVS--GMTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANFFEQRA 301 Query: 498 GEYQKA 503 EY K Sbjct: 302 TEYSKG 307
gb|AAA66436.1| unknown protein sp|P06474|RIR2_HHV1K Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (38 kDa subunit) (340 aa) Score: 98 bits (244), Expect: 4.31365e-19 Length: 314, Idn/Pos/Gap = 91/147/12 (28%/46%/3%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 I K + +RY + + P I + + W E+ D + ++L+E E F Sbjct: 28 IPKCPDPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRF 85 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPE 318 + AF +A+D +V ENL E + +Y Q +E HS Y+++ + + + + Sbjct: 86 LFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQ 144 Query: 319 ERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKR 378 R P +R K W + AS E+ + +EGIFF+ SF AI +L+ Sbjct: 145 ARREYVAGTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTN 204 Query: 379 GLMPGLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCD 437 L+ SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ Sbjct: 205 NLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRS 264 Query: 438 ALPVSLIGMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTN 491 P ++ ++A Y+ F ADRLL + L++ P P F + L+S TN Sbjct: 265 QAPTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTN 323 Query: 492 FFEKRVGEYQKANV 505 FFE R Y A V Sbjct: 324 FFECRSTSYAGAVV 337
gb|AAP39190.1| UL40 [Human herpesvirus 1] gb|AAP39142.1| UL40 [Human herpesvirus 1] (307 aa) Score: 98 bits (244), Expect: 4.34979e-19 Length: 307, Idn/Pos/Gap = 89/145/12 (28%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDIIHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
gb|AAP38984.1| UL40 [Human herpesvirus 1] gb|AAP38958.1| UL40 [Human herpesvirus 1] (307 aa) Score: 97 bits (242), Expect: 6.94053e-19 Length: 307, Idn/Pos/Gap = 89/144/12 (28%/46%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ + A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC 51449] ref|NP_860137.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC 51449] (349 aa) Score: 97 bits (242), Expect: 6.99868e-19 Length: 316, Idn/Pos/Gap = 76/139/10 (24%/43%/3%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 IF + L IK+ + +K +A+ W EE+++ D + LT E+ Sbjct: 29 IFGGNPTSMFDLNKIKYQWAYNLWKVMLANTWFPEEVNMTPDKRDYNGGLTAQEKLGYDR 88 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE 319 LA D + NL + + PE Q E +HS++Y++++++ + +E Sbjct: 89 ALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAYEEALHSQSYAVMVESISANTDE 148 Query: 320 RTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAA---VEGIFFSGSFCAIFWLK 376 +++R + + + + Q L A A +EGI+F F + L Sbjct: 149 IYNMWRVDMQLRSKNDNIANVYIELAKNPNEQNLLKAMFANQILEGIYFYSGFSYFYTLA 208 Query: 377 KRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER---VPA--ERIHSMIRDAVECE 431 + G M G I RDE H ++ S L E+ P+ E + M + AVE E Sbjct: 209 RSGKMLGSAQMIRFIQRDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIE 268 Query: 432 KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISL--QGK 489 ++ ++G+ +++ YI+++AD L +G +L+ + NP W++ + K Sbjct: 269 SQWGEYITQGQILGLTSEIIREYIQYLADARLKAVGLPQLYGSKNPIKWVDQFASFNDQK 328 Query: 490 TNFFEKRVGEYQKANV 505 TNFFE +V Y K ++ Sbjct: 329 TNFFEAKVTNYSKGSI 344
gb|AAP39108.1| UL40 [Human herpesvirus 1] (307 aa) Score: 97 bits (242), Expect: 7.73571e-19 Length: 307, Idn/Pos/Gap = 88/145/12 (28%/47%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V EN+ E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENMGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + AS E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
ref|NP_044510.1| ribonucleotide reductase small subunit [Human herpesvirus 2] emb|CAB06726.1| ribonucleotide reductase small subunit [Human herpesvirus 2] sp|P69521|RIR2_HHV2H Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (38 kDa subunit) sp|P69520|RIR2_HHV23 Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (38 kDa subunit) gb|AAA45807.1| 38K protein (337 aa) Score: 97 bits (242), Expect: 7.93178e-19 Length: 308, Idn/Pos/Gap = 89/147/14 (28%/47%/4%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 32 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELGFYRFLFAFLSA 89 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSL--LIDAYVKDPEERTHLF 324 +D +V ENL E + +Y Q +E +HS Y++ L+ + D R ++ Sbjct: 90 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVA 148 Query: 325 RAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 R + P +R K W + S E+ + +EG+FF+ SF AI +L+ L+ Sbjct: 149 RTI-NHPAIRVKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIAYLRTNNLLRVT 207 Query: 385 TFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 SN+LISRDE +H +C++Y + L + A R++ + R+AV+ E F+ P Sbjct: 208 CQSNDLISRDEAVHTTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEIGFIRSQAPTDS 267 Query: 444 IGMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRV 497 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 268 SILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFP-LSLMSTDKHTNFFECRS 326 Query: 498 GEYQKANV 505 Y A V Sbjct: 327 TSYAGAVV 334
emb|CAA24930.1| unnamed protein product [Human herpesvirus 2] pir||WMBE32 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - human herpesvirus 2 (337 aa) Score: 97 bits (241), Expect: 8.4793e-19 Length: 308, Idn/Pos/Gap = 89/147/14 (28%/47%/4%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 32 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELGFYRFLFAFLSA 89 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSL--LIDAYVKDPEERTHLF 324 +D +V ENL E + +Y Q +E +HS Y++ L+ + D R ++ Sbjct: 90 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVA 148 Query: 325 RAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 R + P +R K W + S E+ + +EG+FF+ SF AI +L+ L+ Sbjct: 149 RTI-NHPAIRVKVDWLEARVRECDSVPEKFILMILIEGVFFAASFAAIAYLRTNNLLRVT 207 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSL 443 SN+LISRDE +H +C++Y+ + P A R++ + R+AV+ E F+ P Sbjct: 208 CQSNDLISRDEAVHTTASCYIYNNYLGDHAKPEAARVYRLFREAVDIEIGFIRSQAPTDS 267 Query: 444 IGMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRV 497 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 268 SILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFP-LSLMSTDKHTNFFECRS 326 Query: 498 GEYQKANV 505 Y A V Sbjct: 327 TSYAGAVV 334
ref|YP_164483.1| small subunit of ribonucleotide reductase [Cercopithecine herpesvirus 2] gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine herpesvirus 2] (325 aa) Score: 96 bits (239), Expect: 1.5206e-18 Length: 329, Idn/Pos/Gap = 95/146/20 (28%/44%/6%) Query: 186 SERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW 245 S G R VP + +RY + + P I + + W E+ A D + Sbjct: 5 SSTGAATPRDPVP------DPERY-FYTTQCPDINHLRSLSILNRWLESELVFAGDEED- 56 Query: 246 RNRLTEAERYFVSHVLAFFAASDGIVLENLA--ERFMRDVEIPEARCFYGFQIAMENIHS 303 LT+ E F + F +A+D +V ENL +I +Y Q A+E +HS Sbjct: 57 VGGLTDEELNFYRFLFTFLSAADDLVTENLGGLSGLFPQKDILH---YYVEQEAIEVVHS 113 Query: 304 ETYSLL-IDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEG 362 YS++ + + D + R P +R K W + + S E+ + +EG Sbjct: 114 RVYSIIQLVLFRNDGQARREYVARTIHHPAIRVKVDWLEARVQACESVPEKFILMILIEG 173 Query: 363 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIH 421 IFF+ SF AI +L+ L+ SN+LISRDE +H +C++Y + L + ER++ Sbjct: 174 IFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLAGHHKPEPERVY 233 Query: 422 SMIRDAVECEKEFVCDALPVS---LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPF 478 + R+AVE E F+ P L + Y+ F ADRLL + L+ P P Sbjct: 234 RLFREAVEIEIGFIRSQAPADSRILDAAALAAIENYVRFSADRLLALIRMKPLFGAPAPA 293 Query: 479 DW--MELISLQGKTNFFEKRVGEYQKANV 505 + L+S + TNFFE R Y A V Sbjct: 294 PSFPLSLMSTEKHTNFFECRSTAYAGAVV 322
gb|AAP39158.1| UL40 [Human herpesvirus 1] (307 aa) Score: 96 bits (239), Expect: 1.70902e-18 Length: 307, Idn/Pos/Gap = 88/144/12 (28%/46%/3%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 266 +RY + + P I + + W E+ D + ++L+E E F + AF +A Sbjct: 2 ERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEED-VSKLSEGELSFYRFLFAFLSA 59 Query: 267 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLL-IDAYVKDPEERTHLFR 325 +D +V ENL E + +Y Q +E +HS Y+++ + + + + R Sbjct: 60 ADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVA 118 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 P +R K W + A E+ + +EGIFF+ SF AI +L+ L+ Sbjct: 119 GTINHPAIRAKVDWLEARVRECAYVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTC 178 Query: 386 FSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 SN+LISRDE +H +C++Y + L + P +R++ + R AVE E F+ P Sbjct: 179 QSNDLISRDEAVHTTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSH 238 Query: 445 GMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVG 498 ++ ++A Y+ F ADRLL + L++ P P F + L+S TNFFE R Sbjct: 239 ILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFP-LSLMSTDKHTNFFECRST 297 Query: 499 EYQKANV 505 Y A V Sbjct: 298 SYAGAVV 304
ref|ZP_00304405.1| COG0208: Ribonucleotide reductase, beta subunit [Novosphingobium aromaticivorans DSM 12444] (351 aa) Score: 96 bits (238), Expect: 1.90482e-18 Length: 304, Idn/Pos/Gap = 80/126/11 (26%/41%/3%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R T P ++P +EF+KR W EE+ L D W +++E ER ++ + FF + Sbjct: 7 RNTYKPFEYPWAYEFWKRQQQIHWMPEEVPLGEDCRDWAQKISEHERNLLTQIFRFFTQA 66 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM 327 D V E++ R + E + ME +H YS L+D + PE +F Sbjct: 67 DVEVQNCYHEQYGRVFKPTEVKMMLAAFSNMETVHIAAYSHLLDT-IGMPESEYGMFLEY 125 Query: 328 ETMPCVRRKAYWAIRWIGSDASFQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTF 386 E + + Y + +D L F EG+ SF + + M G+ Sbjct: 126 EELKA--KHDYLQTFGVETDEDIARTLAMFGGFTEGLQLFASFAMLMNFPRFNKMKGMGQ 183 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEE----RVPAERIHSMIRDAVECEKEFVCDALPVS 442 RDE LHC+ L+ E + E I + V E F+ A Sbjct: 184 IVSWSVRDESLHCEGITRLFHAFVKERGCLTKAVKEDIIDCCQKTVRLEDAFIDLAFEQG 243 Query: 443 LI-GMNQQLMSAYIEFVADRLLVELGYDRLWNTPN-PFDWME-LISLQGKTNFFEKRVGE 499 + GM+ + + YI ++AD L +LG ++ + P W+ L++ NFFE R E Sbjct: 244 PVPGMSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANFFETRATE 303 Query: 500 YQKA 503 Y KA Sbjct: 304 YSKA 307
gb|AAN01603.1| ribonucleotide reductase small subunit [human herpesvirus 2 (strain G)] (342 aa) Score: 96 bits (238), Expect: 2.05337e-18 Length: 311, Idn/Pos/Gap = 89/148/15 (28%/47%/4%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLA--ADMDHWRNRLTEAERYFVSHVLAFF 264 +RY + + P I + + W E +L D + ++L+E E F + AF Sbjct: 32 ERY-FYTSQCPDINHLRSLSILNRWLETETELVFVGDEEEDVSKLSEGELGFYRFLFAFL 90 Query: 265 AASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSL--LIDAYVKDPEERTH 322 +A+D +V ENL E + +Y Q +E +HS Y++ L+ + D R + Sbjct: 91 SAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAY 149 Query: 323 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 382 + R + T P +R K W + S E+ + +EG+FF+ SF AI +L+ L+ Sbjct: 150 VARTI-THPAIRVKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIAYLRTNNLLR 208 Query: 383 GLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPV 441 SN+LISRDE +H +C++Y + L + A R++ + R+AV+ E F+ P Sbjct: 209 VTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEIGFIRSQAPT 268 Query: 442 SLIGMNQQLMSA---YIEFVADRLLVELGYDRLWN----TPNPFDWMELISLQGKTNFFE 494 ++ ++A Y+ F ADRLL + L++ P+ + L+S TNFFE Sbjct: 269 DSSILSPGALAAIENYVRFSADRLLGLIHMQPLYSASAPAPDASFPLSLMSTDKHTNFFE 328 Query: 495 KRVGEYQKANV 505 R Y A V Sbjct: 329 CRSTSYAGAVV 339
emb|CAH87750.1| hypothetical protein PC302623.00.0 [Plasmodium chabaudi] (72 aa) Score: 93 bits (232), Expect: 1.07139e-17 Length: 72, Idn/Pos/Gap = 43/56/0 (59%/77%/0%) Query: 449 QLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTS 508 +LMS YIEFVADRLL LG +++++ NPF WM+LISLQGKTNFFEKRV +YQK+ V Sbjct: 1 RLMSQYIEFVADRLLECLGCSKVFHSKNPFSWMDLISLQGKTNFFEKRVADYQKSGVMAQ 60 Query: 509 ATDNVFALDIEF 520 + VF+L+ +F Sbjct: 61 RKEQVFSLNTDF 72
ref|NP_766646.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium japonicum USDA 110] (360 aa) Score: 92 bits (227), Expect: 3.74537e-17 Length: 307, Idn/Pos/Gap = 85/138/29 (27%/44%/9%) Query: 220 FEFYKRHVASFWTAEEIDLAADMDHWRN-RLTEAERYFVSHVLAFFAASDGIVLENLAER 278 +EF+KR + W EE+ L AD++ W + R+T++ER ++ + FF SD V +N +R Sbjct: 41 YEFWKRQQQTHWMGEEVPLGADLNDWASGRVTDSERALLTQIFRFFTQSDIEVGDNYFKR 100 Query: 279 FMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAY 338 ++ + + ME +H + Y+LL+ + P+ FR M R KA Sbjct: 101 YIPIFQPLTVQMMMAAFTNMETVHIDAYALLLKT-LGMPKTEFEAFRGYAQM---RAKAD 156 Query: 339 WAIRW-IGSDASFQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 396 + + + S A L F A EG+ SF + + M G+ RDE Sbjct: 157 YMHEFGVDSVADVARTLAMFGAFTEGMALFASFAMLLNFPRHNKMNGMGQIVSWSVRDES 216 Query: 397 LHCDFACHLYSMLPAE----ERVPAERIHSMIRDAVECEKEFVCDALPVSLI-GMNQQLM 451 LHC+ L+ E R + I + + V+ E+ FV A + I GM + + Sbjct: 217 LHCEGIIKLFHEWHRETGAVTRPVRDDIVDVAKTMVKLEENFVELAFGLGKIEGMLPEHI 276 Query: 452 SAYIEFVADRLLVEL--------------GYDRLWNTPNPFDWM-ELISLQGKTNFFEKR 496 AY+ +VAD L +L G+ +L +P W+ E+++ NFFE+R Sbjct: 277 HAYVRYVADWRLAQLRIAPVFGFFEAKEGGFTQL--KAHPLPWLVEILNGVEHANFFEQR 334 Query: 497 VGEYQKA 503 EY KA Sbjct: 335 ATEYSKA 341
gb|AAV89067.1| ribonucleotide reductase beta subunit [Zymomonas mobilis subsp. mobilis ZM4] ref|YP_162178.1| ribonucleotide reductase beta subunit [Zymomonas mobilis subsp. mobilis ZM4] (345 aa) Score: 92 bits (227), Expect: 4.24472e-17 Length: 301, Idn/Pos/Gap = 80/126/15 (26%/41%/4%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P ++P FEF++R W EE+ L D W +L++ ER ++ + FF +D V Sbjct: 12 PFEYPWAFEFWQRQQQLHWLPEEVPLGEDCRDWAQKLSDHERNLLTQIFRFFTQADVEVQ 71 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPC 332 + +++ R E + ME +H YS L+D + PE F + M Sbjct: 72 DCYFDKYGRIFRPTEIKMMLTAFSNMETVHIAAYSHLLDT-IGMPETEYSAFLQYKEMK- 129 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 + Y A +GSD L EG+ SF + + M G+ Sbjct: 130 -DKHDYLATFDVGSDQDIARTLAMMGGFTEGLQLFASFAMLMNFPRFNKMKGMGQIVSWS 188 Query: 392 SRDEGLHCDFACHLYSMLPAEERVPAERIHSMI----RDAVECEKEF---VCDALPVSLI 444 RDE LHC+ L+ E + +++ I + V E F V + PV Sbjct: 189 VRDESLHCEGIIRLFHTFCQERQCLTKQVKDDILNICQRTVRIEDAFIDLVFEMGPVE-- 246 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLWNT-PNPFDWME-LISLQGKTNFFEKRVGEYQK 502 GM + + YI ++AD L +LG ++ +P W+ L++ NFFE R EY K Sbjct: 247 GMTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANFFETRSTEYSK 306 Query: 503 A 503 A Sbjct: 307 A 307
ref|YP_192386.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter oxydans 621H] gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter oxydans 621H] (339 aa) Score: 91 bits (226), Expect: 4.42555e-17 Length: 305, Idn/Pos/Gap = 83/132/16 (27%/43%/5%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P ++P ++ + W EE+ LA D+ W LTEAER+ V+ + FF SD V Sbjct: 27 PFRYPWAYDAWLTQQRVHWLPEEVPLADDVKDWHRTLTEAERHLVTQIFRFFTQSDVEVN 86 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPC 332 + + + + E +E IH YS L+D + PE F + M Sbjct: 87 SAYMKYYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDT-IGMPETEYSAFLKYKEMK- 144 Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 + + I + + + AF A +EG+ SF + + + G+ Sbjct: 145 -DKYDFMQSFNIDNKREIAKTMAAFGAFMEGLQLFASFAILLNFPRFNKLKGMGQIVSWS 203 Query: 392 SRDEGLHCDFACHLYSMLPAEER---VPA--ERIHSMIRDAVECEKEFV--CDAL-PVSL 443 RDE LHC L+ E P E + + R VE E F+ C + PV Sbjct: 204 VRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFIDLCFEMGPVE- 262 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 GM+ + + YI F+ADR L +LG D ++ NP W+ ++++ NFFE R EY Sbjct: 263 -GMSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANFFENRSTEYS 321 Query: 502 KANVT 506 +A+ + Sbjct: 322 RASTS 326
ref|YP_153772.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale str. St. Maries] gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale str. St. Maries] (324 aa) Score: 91 bits (226), Expect: 4.93259e-17 Length: 317, Idn/Pos/Gap = 83/140/20 (26%/44%/6%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P ++ + W EE+ LA D+ W+ +L+E E+ + + FF +D I + Sbjct: 12 PFYYPWAYDAWLCQQRIHWIPEEVPLADDVQDWKTKLSEQEKNLLVQIFRFFTQAD-IEV 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIA-MENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N + ++ P C + ME +H YS L+D + PE F E M Sbjct: 71 NNCYMKHYSNIFKPTEICMMLSAFSNMETVHIAAYSYLLDT-IGMPEVEYQAFLKFEVM- 128 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSG-----SFCAIFWLKKRGLMPGLTF 386 ++K + R+ S + + AV G F G SF + ++ G M G+ Sbjct: 129 --KKKYDYMQRFEESRKGDKRHVAKTLAVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQ 186 Query: 387 SNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMIRDAVECEKEFVCDALPV 441 +RDE LH + L++ E + E ++ R V E EF+ A + Sbjct: 187 IIAWSARDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFIDLAFAL 246 Query: 442 SLI-GMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVG 498 + G++ + YI ++A+R L +L + ++ + NP W+ E+++ TNFFE RV Sbjct: 247 GDVEGLSAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNFFENRVT 306 Query: 499 EYQKANVTTSATDNVFA 515 EY +A T D FA Sbjct: 307 EYSRA-ATEGTWDEAFA 322
ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter upsaliensis RM3195] gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter upsaliensis RM3195] (340 aa) Score: 90 bits (224), Expect: 7.93638e-17 Length: 293, Idn/Pos/Gap = 73/128/18 (24%/43%/6%) Query: 228 ASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPE 287 A+ W +E+D D +R LT AE+ V + + D NLA+ + PE Sbjct: 48 ANTWFPKEVDTTRDALDYRCHLTAAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPE 107 Query: 288 ARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWI--- 344 Q E HS++Y+++++ + T L ME R+ I I Sbjct: 108 INAVLARQAYEEANHSKSYAVMVETIC----DNTDLIYEMEKHDATLREKNDFISGIYEE 163 Query: 345 -GSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 D + L+A A +EG++F F AI+ L + G M G I RDE H Sbjct: 164 LAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDEITHLL 223 Query: 401 FACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 ++ + + E ++I+SM + A E E ++ ++G ++ YI Sbjct: 224 LFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWGKYITQNQIMGFTDDIIEEYI 283 Query: 456 EFVADRLLVELGYDRLWNTPNPFDWMELISL--QGKTNFFEKRVGEYQKANVT 506 ++ D+ L+ + D+++N +P W++ S K+NFFE +V Y K +++ Sbjct: 284 HYLVDQRLIAINLDKIYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGSIS 336
ref|NP_220888.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia prowazekii str. Madrid E] ref|YP_067451.1| Ribonucleotide reductase.; ribonucleoside-diphosphate reductase beta subunit [Rickettsia typhi str. Wilmington] emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia prowazekii] gb|AAU03969.1| ribonucleoside-diphosphate reductase beta subunit; Ribonucleotide reductase. [Rickettsia typhi str. Wilmington] pir||B71655 ribonucleoside-diphosphate reductase beta chain (nrdB) RP512 - Rickettsia prowazekii (324 aa) Score: 90 bits (224), Expect: 8.13755e-17 Length: 314, Idn/Pos/Gap = 86/130/17 (27%/41%/5%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P +E + W EE+ LA D+ W+ LT E++ ++ + FF +D V Sbjct: 12 PFSYPWAYEAWHTQQKIHWLPEEVPLAYDVKDWKYNLTPGEKHLLTQIFRFFTQADIEVN 71 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPC 332 + + R + E ME +H YS L+D V PE F + M Sbjct: 72 NCYMKHYSRVFKPTEVLMMLSAFSNMETVHIAAYSHLLDT-VGMPEVEYSAFLKYKEM-- 128 Query: 333 VRRKAYWAIRWIGSD--ASFQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 + Y ++ G D L F A EG+ SF + + M G+ Sbjct: 129 --KDKYDYMQQFGVDNKEDIATTLAVFGAFTEGLQLFASFAIMLNFPRFNKMKGMGQIIA 186 Query: 390 LISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 RDE LH + L+ E +RI+ V E F+ A V I Sbjct: 187 WSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGI 246 Query: 445 -GMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 G+ + YI ++ADR L++LG ++ NP W+ E+++ TNFFE R EY Sbjct: 247 EGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRATEYS 306 Query: 502 KANVTTSATDNVFA 515 KA TT + + VFA Sbjct: 307 KA-ATTGSWEEVFA 319
gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2] (313 aa) Score: 90 bits (224), Expect: 8.84566e-17 Length: 301, Idn/Pos/Gap = 85/140/19 (28%/46%/6%) Query: 217 PKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 P I + + W E+ A D + +RL+ E F + F +A+D +V E L Sbjct: 17 PDINRLRSLSILNRWLESELVFAGDEED-VDRLSPGELDFYRFLFTFLSAADDLVTEELG 75 Query: 277 ER----FMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMET-MP 331 + +D+ +Y Q +E +HS YS++ K+ + ++ A P Sbjct: 76 RLSGLFYQKDI-----LHYYVEQECIEVVHSRVYSIIQMVLFKNDDAARRIYVARTVGHP 130 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 + K W + S E+ + +EGIFF+ SF AI +L+ L+ SN+LI Sbjct: 131 AIHAKVDWLEARVRDCPSVPEKFILMILIEGIFFAASFAAIAFLRTSNLLKVTCQSNDLI 190 Query: 392 SRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQL 450 SRDE +H +C +Y + + A + P R+ + +AV+ E F+ +P +++ Sbjct: 191 SRDEAVHTTASCCIYNNYIGAHPKPPPTRVRQLFLEAVDIEIAFIRAKMPRDGQVLSESA 250 Query: 451 MSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISLQGKTNFFEKRVGEYQKAN 504 +++ Y+ F ADRLL +G L+N P P F + L+S TNFFE R Y A Sbjct: 251 VASIENYVRFSADRLLCLIGDQPLFNAPPPDANFP-LRLMSTDKHTNFFECRSTAYAGAV 309 Query: 505 V 505 V Sbjct: 310 V 310
ref|ZP_00178432.1| COG0208: Ribonucleotide reductase, beta subunit [Crocosphaera watsonii WH 8501] (321 aa) Score: 90 bits (224), Expect: 8.91977e-17 Length: 298, Idn/Pos/Gap = 76/133/26 (25%/44%/8%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR 281 Y++ +FW + +D+ D+ + N LT+ ERY +L++ D + N+ Sbjct: 19 LYQQMRENFWIPQRLDITQDVTDYGN-LTDDERYAYDGILSYLTFLDSVQTCNIPH-LKT 76 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAI 341 + PE QI+ E +H+++Y LI+ + PE RT ++ T +R + + Sbjct: 77 SITAPEISLCMAEQISQEGMHNQSYQYLIETIIP-PERRTQVYEFWRTDKLLRDRCEFIA 135 Query: 342 RWIGS---DASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 395 + DA+ + +A A +EG++F F + L R LMPG ++I+RDE Sbjct: 136 KLYQKYIDDATTENYFIALMADFLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRDE 195 Query: 396 GLHCDFACHLYSMLPAEERV----PAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLM 451 H LY L E R E+I+ M AV E + + +++G+ + Sbjct: 196 LSH----VRLYQKLIPEARKVFPHSVEQIYEMFDMAVNYECRWTNHIVGNNILGITESST 251 Query: 452 SAYIEFVADRLLVELGYDRLWNTP----NPFDWMELIS-----LQGKTNFFEKRVGEY 500 Y +++A+ L +G + L+ P +P+ +E S K NFFE V Y Sbjct: 252 EKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAAHTKANFFEATVTSY 309
ref|NP_360288.1| ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] [Rickettsia conorii str. Malish 7] gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia sibirica 246] gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] [Rickettsia conorii str. Malish 7] ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia sibirica 246] pir||C97781 hypothetical protein nrdB [imported] - Rickettsia conorii (strain Malish 7) (328 aa) Score: 90 bits (224), Expect: 9.37768e-17 Length: 313, Idn/Pos/Gap = 86/130/17 (27%/41%/5%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P +E + W EE+ LA D+ W+ LT E++ ++ + FF +D V Sbjct: 12 PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKYNLTPGEKHLLTQIFRFFTQADIEVN 71 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPC 332 + + R + E ME +H YS L+D V PE F + M Sbjct: 72 NCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDT-VGMPEVEYSAFLKYKEM-- 128 Query: 333 VRRKAYWAIRWIGSDAS--FQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 + Y ++ G DA L F A EG+ SF + + M G+ Sbjct: 129 --KDKYDYMQQFGVDAKEDIATTLAVFGAFTEGLQLFASFAIMLNFPRFNKMKGMGQIIA 186 Query: 390 LISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPVSLI 444 RDE LH + L+ E +RI+ V E F+ A V I Sbjct: 187 WSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGI 246 Query: 445 -GMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQ 501 G+ + YI ++ADR L++LG ++ NP W+ E+++ TNFFE R EY Sbjct: 247 EGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTEYS 306 Query: 502 KANVTTSATDNVF 514 KA TT + + VF Sbjct: 307 KA-ATTGSWEEVF 318
dbj|BAA00748.1| UL40 [Human herpesvirus 2] (262 aa) Score: 90 bits (224), Expect: 9.77718e-17 Length: 259, Idn/Pos/Gap = 79/127/12 (30%/49%/4%) Query: 256 FVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSL--LIDAY 313 F + AF +A+D +V ENL E + +Y Q +E +HS Y++ L+ + Sbjct: 4 FYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFH 62 Query: 314 VKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIF 373 D R ++ R + P +R K W + S E+ + +EG+FF+ SF AI Sbjct: 63 NNDQARRAYVARTI-NHPAIRVKVDWLEARVRECDSIPEKFILMILIEGVFFAASFAAIA 121 Query: 374 WLKKRGLMPGLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEK 432 +L+ L+ SN+LISRDE +H +C++Y + L + A R++ + R+AV+ E Sbjct: 122 YLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEI 181 Query: 433 EFVCDALPVSLIGMNQQLMSA---YIEFVADRLLVELGYDRLWNTPNP---FDWMELISL 486 F+ P ++ ++A Y+ F ADRLL + L++ P P F + L+S Sbjct: 182 GFIRSQAPTDSSILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFP-LSLMST 240 Query: 487 QGKTNFFEKRVGEYQKANV 505 TNFFE R Y A V Sbjct: 241 DKHTNFFECRSTSYAGAVV 259
ref|ZP_00369685.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter lari RM2100] gb|EAL54410.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter lari RM2100] (340 aa) Score: 90 bits (222), Expect: 1.45931e-16 Length: 293, Idn/Pos/Gap = 72/125/18 (24%/42%/6%) Query: 228 ASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPE 287 A+ W +E+D D +R LT AE+ V + + D NLA+ + PE Sbjct: 48 ANTWFPKEVDTTKDALDYRCNLTVAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPE 107 Query: 288 ARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA-------YWA 340 Q E HS++Y+++++A E T L ME R+ Y Sbjct: 108 INAVLARQAYEEANHSKSYAVMVEAIC----ENTDLIYEMEKHDETLREKNDFISSIYEE 163 Query: 341 IRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 + D +VA +EG++F F AI+ L + G M G I RDE H Sbjct: 164 LAGEVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDEITHLL 223 Query: 401 FACHLYSMLPAEER-----VPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 ++ + + E +I+ M + A E E ++ ++G ++ YI Sbjct: 224 LFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWGKYITQNQIMGFTDDIIEEYI 283 Query: 456 EFVADRLLVELGYDRLWNTPNPFDWMELISL--QGKTNFFEKRVGEYQKANVT 506 ++ D+ L+ + D+++N +P W++ S K+NFFE +V Y K +++ Sbjct: 284 HYLVDQRLIAINLDKIYNVKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGSLS 336
gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB) [Treponema pallidum subsp. pallidum str. Nichols] ref|NP_218493.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB) [Treponema pallidum subsp. pallidum str. Nichols] pir||G71372 probable ribonucleoside-diphosphate reductase, subunit beta (nrdB) - syphilis spirochete sp|O83092|RIR2_TREPA Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (351 aa) Score: 89 bits (221), Expect: 1.84336e-16 Length: 314, Idn/Pos/Gap = 82/145/32 (26%/46%/10%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 +K+P + ++Y++ + +FW EEI++++D+ +RN L+ E+ +L+F D I Sbjct: 41 MKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRN-LSAIEKTAYDKILSFLIFLDSIQTA 99 Query: 274 NLAE--RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH-LFRAMETM 330 NL +++ EI FQ E +HS++YS ++D + PEER L++ + Sbjct: 100 NLPNIGQYITANEINLCLTIQAFQ---EAVHSQSYSYMLDT-ICSPEERNDILYQWKDDE 155 Query: 331 PCVRRKAYWAIRW--IGSDASFQERL---VAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 + R + + D S L +A +EGI+F F + L + MPG Sbjct: 156 HLLARNKFIGNLYNEFQDDKSVLALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSV 215 Query: 386 FSNELISRDEGLHCDFACHLYSMLPAEE-RVPAERIHSMIRDAVE--CEKEF------VC 436 I+RDE H + L EE +V R + RD + CE+E + Sbjct: 216 QEIRYINRDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWGDYVIG 275 Query: 437 DALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN----TPNPFDWMELISLQG--KT 490 D +P G+N+ +++ YI ++ + LG++ L+ P W+ S KT Sbjct: 276 DQIP----GLNRHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIKT 331 Query: 491 NFFEKRVGEYQKAN 504 +FFE + Y K++ Sbjct: 332 DFFEAKSTAYAKSS 345
gb|AAC95584.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3] pir||T42973 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - ateline herpesvirus 3 (strain 73) ref|NP_048031.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3] (305 aa) Score: 89 bits (221), Expect: 1.89009e-16 Length: 293, Idn/Pos/Gap = 78/142/6 (26%/48%/2%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 L+ H E K + W ++ L D+ + L E + F + F ++ + Sbjct: 8 LYTCDHIGFLELTKETWKNRWFPSQVPLQGDV-CCVDLLNERDIEFYKFLFTFLGMAEKL 66 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 V N+ E + E + +Y Q+AMENIH + Y+ +++ K+ + + Sbjct: 67 VNINI-EDLLGQFESHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYAHDIMN 125 Query: 331 PC-VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 C ++ K W + + E+++ F VEGIFF SF +I L+ RG+M G+ +N+ Sbjct: 126 DCALQEKIRWLNGRVTETSDKAEKILLFLLVEGIFFISSFFSIGLLRVRGIMNGICLAND 185 Query: 390 LISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 I+RDE LH A LY +M ER P + I+ + R+AVE E +F+ A + +N Sbjct: 186 YIARDEMLHTSAAALLYNTMTKPSERPPEKWIYELFREAVEVEFKFI-SAKVHGVSHVNV 244 Query: 449 QLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKT-NFFEKRVGEY 500 + +++ ADR+L + + ++++ P + + + K+ NFFE+ +Y Sbjct: 245 HEIRQFLQATADRILESINLNPIYHSVPPANCPLVYTSSTKSVNFFERDNSDY 297
gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] ref|NP_603013.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] (348 aa) Score: 88 bits (219), Expect: 2.86856e-16 Length: 321, Idn/Pos/Gap = 81/143/20 (25%/44%/6%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 I K + + L +++ + Y+ +A+FW E++DL D + + N LT ER Sbjct: 24 IIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKNDYEN-LTVPEREAYDG 82 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE 319 +L+F D I N+ V PE Q E IHS++Y +I++ + P++ Sbjct: 83 ILSFLIFLDSIQTNNIPN-ISDHVTAPEVNLLLAIQTFQEAIHSQSYQYIIESIL--PKQ 139 Query: 320 RTHLF--RAMETMPCVRRKAYWAIRWIG-----SDASFQERLVAFAAVEGIFFSGSFCAI 372 L + + R ++ A + SD +F + ++A +E ++F F Sbjct: 140 SRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVIIANYLLESLYFYNGFNFF 199 Query: 373 FWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE--ERVPAERIHSMIRDAVEC 430 + L R M G + LI+RDE H + + + AE I+SM + AVE Sbjct: 200 YLLASRNKMVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAETIYSMFKTAVEQ 259 Query: 431 EKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNPFDWME-LISLQ 487 E + + ++G+ Q AY +++A+ L LG + L++ NP+ +E + Sbjct: 260 EITWTEHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTE 319 Query: 488 G----KTNFFEKRVGEYQKAN 504 G K+NFFE V Y ++ Sbjct: 320 GEGNVKSNFFEGTVTSYNMSS 340
ref|ZP_00340349.1| COG0208: Ribonucleotide reductase, beta subunit [Rickettsia akari str. Hartford] (327 aa) Score: 88 bits (218), Expect: 3.77785e-16 Length: 316, Idn/Pos/Gap = 87/132/23 (27%/41%/7%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P + + W EE+ LA D+ W+ LT E++ ++ + FF +D V Sbjct: 12 PFSYPWAYTAWHTQQKIHWLPEEVPLADDVKDWKYNLTPGEKHLLTQIFRFFTQADIEVN 71 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPC 332 + + R + E ME +H YS L+D V PE F + M Sbjct: 72 NCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDT-VGMPEVEYSAFLKYKEM-- 128 Query: 333 VRRKAYWAIRWIGSDAS--FQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 389 + Y I+ G D L F A EG+ SF + + M G+ + Sbjct: 129 --KDKYDYIQQFGVDTKEDIATTLAVFGAFTEGLQLFASFAIMLNFPRFNKMKGM---GQ 183 Query: 390 LIS---RDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPV 441 +IS RDE LH + L+ E +RI+ V E F+ A V Sbjct: 184 IISWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIELAFEV 243 Query: 442 SLI-GMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFFEKRVG 498 I G+ + YI ++ADR L++LG ++ NP W+ E+++ TNFFE R Sbjct: 244 GGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFFENRAT 303 Query: 499 EYQKANVTTSATDNVF 514 EY KA TT + + VF Sbjct: 304 EYSKA-ATTGSWEEVF 318
emb|CAA45683.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2] ref|NP_040262.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2] sp|Q01038|RIR2_SHV21 Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) pir||WMBEP5 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain - saimiriine herpesvirus 1 (strain 11) gb|AAA46136.1| ribonucleotide reductase small subunit (305 aa) Score: 88 bits (218), Expect: 4.10658e-16 Length: 295, Idn/Pos/Gap = 77/143/10 (26%/48%/3%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 L+ H E K + W ++ L D+ + L E + F + F ++ + Sbjct: 8 LYTCDHVGFLELTKETWKNRWFPSQVPLQGDV-CCVDMLNERDLEFYKFLFTFLGMAEKL 66 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 V N+ E + + + +Y Q+AMENIH + Y+ +++ K+ + + A + M Sbjct: 67 VNINI-EDLLSQFDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSY-ACDIM 124 Query: 331 --PCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 388 ++ K W + + E+++ F VEGIFF SF +I + RG+M G+ +N Sbjct: 125 NDSALQEKLRWLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLAN 184 Query: 389 ELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFV-CDALPVSLIGM 446 + I+RDE LH A LY +M + ER + I+ + R+AVE E +F+ VSL+ + Sbjct: 185 DYIARDEMLHTSAAALLYNTMTKSSERPSEDWIYKLFREAVEVEFKFIAAKGYGVSLVNV 244 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDW-MELISLQGKTNFFEKRVGEY 500 ++ + +++ ADR+L + + ++ + P + + S NFFE+ +Y Sbjct: 245 HE--IRQFLQATADRILESINLNPIYGSLPPENCPLAYTSSTKSVNFFERDNSDY 297
ref|NP_223733.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter pylori J99] gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter pylori J99] pir||C71858 ribonucleoside-diphosphate reductase 1 beta chain - Helicobacter pylori (strain J99) sp|Q9ZKC3|RIR2_HELPJ Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (341 aa) Score: 88 bits (218), Expect: 4.46393e-16 Length: 319, Idn/Pos/Gap = 78/137/15 (24%/42%/4%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 IF + L IK+ +K +A+ W AEE+ + D + +L+ E+ Sbjct: 22 IFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYL-KLSAEEKIGYDR 80 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE 319 LA D + NL + + PE Q E +HS Y++++++ + EE Sbjct: 81 ALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEE 140 Query: 320 RTHLFRAMETMPCVRRKAYWAIRWIG-----SDASFQERLVAFAAVEGIFFSGSFCAIFW 374 ++R M + Y A ++ ++ + + L A +EGI+F F + Sbjct: 141 IYDMWR--NDMQLKSKNDYIAQVYMELAKNPTEENILKALFANQILEGIYFYSGFSYFYT 198 Query: 375 LKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER---VPA--ERIHSMIRDAVE 429 L + G M G I RDE H ++ + L E P + M + AVE Sbjct: 199 LARSGKMLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVE 258 Query: 430 CEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISL--Q 487 E + ++G+ L+ YI+F+AD L ++G +++ +P W+E S + Sbjct: 259 IEASWGDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYGVQHPIKWVESFSSFNE 318 Query: 488 GKTNFFEKRVGEYQKANVT 506 ++NFFE RV Y K +V+ Sbjct: 319 QRSNFFEARVSNYAKGSVS 337
ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 1/2a F6854] (349 aa) Score: 87 bits (216), Expect: 6.83161e-16 Length: 319, Idn/Pos/Gap = 80/142/30 (25%/44%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK ++W +E+D+ +D + L+E E+Y ++ A D Sbjct: 39 IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQYPT-LSEQEKYAFDAIIGLLATLDSPQTR 97 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P E IH+E+YS ++ A + + +E+ +F T Sbjct: 98 FIYNIAE-YITD---PAVHANAAIIAQQEVIHNESYSYVL-ASITNLQEQNRVFELARTH 152 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + + L+ + +EGI F F + L ++ M G Sbjct: 153 PTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFYSGFAYFYNLVRQNKMTGT 212 Query: 385 TFSNELISRDEGLHCDFACHLYSM-------LPAEERVPAERIHSMIRDAVECEKEFVCD 437 I+RDE H F + L EE V E H R AVE E E+ + Sbjct: 213 GKIISFINRDELAHSKFISEVIRAILGENPELQTEELV--EYTHEAFRHAVELETEWSEE 270 Query: 438 ALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTPNPFDWMELIS---LQGKTNF 492 L + G++ + M Y+++ A+++L LG L+ ++ N W++ + + KT+F Sbjct: 271 VLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDF 329 Query: 493 FEKRVGEYQKANVTTSATD 511 FE R Y+K N+ D Sbjct: 330 FEMRNSSYKKTNMDNGFDD 348
ref|NP_970949.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema denticola ATCC 35405] gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema denticola ATCC 35405] (351 aa) Score: 87 bits (216), Expect: 7.55104e-16 Length: 338, Idn/Pos/Gap = 86/149/26 (25%/44%/7%) Query: 186 SERGDTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW 245 +E GD + +H + + +K+ ++Y++ + +FW EEI++ D+ + Sbjct: 15 NENGD--IETHKRKMIGGNTTNLNDFNNMKYSWASDWYRQAMNNFWIPEEINMTTDVQDY 72 Query: 246 RNRLTEAERYFVSHVLAFFAASDGIVLENLAE--RFMRDVEIPEARCFYGFQIAMENIHS 303 R +L+ E+ +L+F D I NL +++ E+ FQ E +HS Sbjct: 73 R-KLSIPEKTAYDKILSFLIFLDSIQTANLPNVGQYVTANEVNLCLTIQAFQ---EAVHS 128 Query: 304 ETYSLLIDAYVKDPEERTH-LFRAMETMPCVRRKAYWAIRW--IGSDAS---FQERLVAF 357 ++YS ++D + PEERT L++ + +RR + + SD S F + VA Sbjct: 129 QSYSYMLDT-ICSPEERTEILYQWKDDEHLLRRNKFIGDLYNEFQSDKSALAFLKVCVAN 187 Query: 358 AAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER--- 414 +EGI+F F + L + MPG I+RDE H + L EE Sbjct: 188 YILEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTHLWLFRSMIQELQKEEPQLF 247 Query: 415 VP--AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELG----Y 468 P E +MI++ E E + + + G+N Q+++ YI+++ + LG Y Sbjct: 248 TPQNVELFRAMIKEGCEQEIAWGDYVIGNDIPGLNSQMITDYIQYLGNLRCENLGFAPIY 307 Query: 469 DRLWNTPNPFDWMELISLQG--KTNFFEKRVGEYQKAN 504 D P W S KT+FFE + Y K++ Sbjct: 308 DGHREEPQSMSWASQYSNANLIKTDFFEAKSTAYAKSS 345
gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB) [Helicobacter pylori 26695] pir||D64565 ribonucleoside diphosphate reductase, beta subunit - Helicobacter pylori (strain 26695) ref|NP_207162.1| ribonucleoside diphosphate reductase, beta subunit (nrdB) [Helicobacter pylori 26695] sp|P55983|RIR2_HELPY Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (341 aa) Score: 87 bits (215), Expect: 8.55778e-16 Length: 319, Idn/Pos/Gap = 78/137/15 (24%/42%/4%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 IF + L IK+ +K +A+ W AEE+ + D + +L+ E+ Sbjct: 22 IFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYL-KLSAEEKIGYDR 80 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE 319 LA D + NL + + PE Q E +HS Y++++++ + EE Sbjct: 81 ALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEE 140 Query: 320 RTHLFRAMETMPCVRRKAYWAIRWIG-----SDASFQERLVAFAAVEGIFFSGSFCAIFW 374 ++R M + Y A ++ ++ + + L A +EGI+F F + Sbjct: 141 IYDMWR--NDMQLKSKNDYIAQVYMELAKNPTEENILKALFANQILEGIYFYSGFSYFYT 198 Query: 375 LKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER---VPA--ERIHSMIRDAVE 429 L + G M G I RDE H ++ + L E P + M + AVE Sbjct: 199 LARSGKMLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVE 258 Query: 430 CEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISL--Q 487 E + ++G+ L+ YI+F+AD L ++G +++ +P W+E S + Sbjct: 259 IEALWGDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYGVQHPIKWVESFSSFNE 318 Query: 488 GKTNFFEKRVGEYQKANVT 506 ++NFFE RV Y K +V+ Sbjct: 319 QRSNFFEARVSNYAKGSVS 337
emb|CAC84357.1| RRsmall [Saimiriine herpesvirus 2] (305 aa) Score: 87 bits (215), Expect: 8.7747e-16 Length: 295, Idn/Pos/Gap = 77/142/10 (26%/48%/3%) Query: 211 LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI 270 L+ H E K + W ++ L D+ + L E + F + F ++ + Sbjct: 8 LYTCDHVGFLELTKETWKNRWFPSQVPLQGDV-CCVDMLNERDLEFYKFLFTFLGMAEKL 66 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 V N+ E + + + +Y Q+AMENIH + Y+ ++ K+ + + A + M Sbjct: 67 VNINI-EDLLSQFDSHDVSHYYAEQMAMENIHGKVYANILSMLFKNNITEVYSY-ACDIM 124 Query: 331 --PCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 388 ++ K W + + E+++ F VEGIFF SF +I + RG+M G+ +N Sbjct: 125 NDSALQEKLKWLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLAN 184 Query: 389 ELISRDEGLHCDFACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFV-CDALPVSLIGM 446 + I+RDE LH A LY +M + ER + I+ + R+AVE E +F+ VSL+ + Sbjct: 185 DYIARDEMLHTSAAALLYNTMTKSSERPSEDWIYKLFREAVEVEFKFIAAKGHGVSLVNV 244 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDW-MELISLQGKTNFFEKRVGEY 500 ++ + +++ ADR+L + + ++ + P + + S NFFE+ +Y Sbjct: 245 HE--IRQFLQATADRILESINLNPIYGSLPPENCPLAYTSSTKSVNFFERDNSDY 297
ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter coli RM2228] gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter coli RM2228] (340 aa) Score: 87 bits (215), Expect: 9.3804e-16 Length: 293, Idn/Pos/Gap = 72/126/18 (24%/43%/6%) Query: 228 ASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPE 287 A+ W +E+D D +R LT E+ V + + D NLA+ + PE Sbjct: 48 ANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPE 107 Query: 288 ARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWI--- 344 Q E HS++Y+++++A + T L ME R+ I I Sbjct: 108 INAVLARQAYEEANHSKSYAVMVEAIC----DNTDLIYEMEKHDETLREKNDFISSIYEE 163 Query: 345 -GSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 D + L+A A +EG++F F AI+ L + G M G I RDE H Sbjct: 164 LAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDEITHLL 223 Query: 401 FACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 ++ + + E +I+ M + A + E ++ ++G ++ YI Sbjct: 224 LFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFTDDIIEEYI 283 Query: 456 EFVADRLLVELGYDRLWNTPNPFDWMELISL--QGKTNFFEKRVGEYQKANVT 506 ++ D+ LV + D+++N +P W++ S K+NFFE +V Y K +++ Sbjct: 284 HYLVDQRLVAINLDKIYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGSIS 336
ref|YP_014776.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b F2365] ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b H7858] gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b H7858] gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria monocytogenes str. 4b F2365] (349 aa) Score: 87 bits (215), Expect: 9.69876e-16 Length: 319, Idn/Pos/Gap = 80/142/30 (25%/44%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK ++W +E+D+ +D + L+E E+Y ++ A D Sbjct: 39 IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY-PALSEQEKYAFDAIIGLLATLDSPQTR 97 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P E IH+E+YS ++ A + + +E+ +F T Sbjct: 98 FIYNIAE-YITD---PAVHANAAIIAQQEVIHNESYSYVL-ASITNLQEQNRVFELARTH 152 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + + L+ + +EGI F F + L ++ M G Sbjct: 153 PTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFYSGFAYFYNLVRQNKMTGT 212 Query: 385 TFSNELISRDEGLHCDFACHLYSM-------LPAEERVPAERIHSMIRDAVECEKEFVCD 437 I+RDE H F + L EE V E H R AVE E E+ + Sbjct: 213 GKIISFINRDELAHSKFISEVIRAILGENPELQTEELV--EYTHDAFRHAVELETEWSEE 270 Query: 438 ALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTPNPFDWMELIS---LQGKTNF 492 L + G++ + M Y+++ A+++L LG L+ ++ N W++ + + KT+F Sbjct: 271 VLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDF 329 Query: 493 FEKRVGEYQKANVTTSATD 511 FE R Y+K N+ D Sbjct: 330 FEMRNSSYKKTNMDNGFDD 348
ref|NP_471590.1| hypothetical protein lin2258 [Listeria innocua Clip11262] emb|CAC97486.1| lin2258 [Listeria innocua] pir||AF1714 ribonucleoside-diphosphate reductase, chain beta homolog lin2258 [imported] - Listeria innocua (strain Clip11262) (349 aa) Score: 87 bits (215), Expect: 1.0631e-15 Length: 319, Idn/Pos/Gap = 80/142/30 (25%/44%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK ++W +E+D+ +D + L+E E+Y ++ A D Sbjct: 39 IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY-PALSEQEKYAFDAIIGLLATLDSPQTR 97 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P E IH+E+YS ++ A + + +E+ +F T Sbjct: 98 FIYNIAE-YITD---PAVHANAAIIAQQEVIHNESYSYVL-ASITNLQEQNRVFELARTH 152 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + + L+ + +EGI F F + L ++ M G Sbjct: 153 PTIIKRNEPIMAAYDDFMNNKTGETLVKALIQSSILEGINFYSGFAYFYNLVRQNKMTGT 212 Query: 385 TFSNELISRDEGLHCDFACHLYSM-------LPAEERVPAERIHSMIRDAVECEKEFVCD 437 I+RDE H F + L EE V E H R AVE E E+ + Sbjct: 213 GKIISFINRDELAHSKFISEVIRAILGENPELQTEELV--EYTHDAFRHAVELETEWSEE 270 Query: 438 ALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTPNPFDWMELIS---LQGKTNF 492 L + G++ + M Y+++ A+++L LG L+ ++ N W++ + + KT+F Sbjct: 271 VLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDF 329 Query: 493 FEKRVGEYQKANVTTSATD 511 FE R Y+K N+ D Sbjct: 330 FEMRNSSYKKTNMDNGFDD 348
ref|NP_465678.1| hypothetical protein lmo2154 [Listeria monocytogenes EGD-e] emb|CAD00232.1| lmo2154 [Listeria monocytogenes] pir||AB1344 ribonucleoside-diphosphate reductase, chain beta homolog lmo2154 [imported] - Listeria monocytogenes (strain EGD-e) (349 aa) Score: 87 bits (214), Expect: 1.12705e-15 Length: 319, Idn/Pos/Gap = 80/142/30 (25%/44%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK ++W +E+D+ +D + L+E E+Y ++ A D Sbjct: 39 IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY-PALSEQEKYAFDAIIGLLATLDSPQTR 97 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P E IH+E+YS ++ A + + +E+ +F T Sbjct: 98 FIYNIAE-YITD---PAVHANAAIIAQQEVIHNESYSYVL-ASITNLQEQNRVFELARTH 152 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + + L+ + +EGI F F + L ++ M G Sbjct: 153 PTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFYSGFAYFYNLVRQNKMTGT 212 Query: 385 TFSNELISRDEGLHCDFACHLYSM-------LPAEERVPAERIHSMIRDAVECEKEFVCD 437 I+RDE H F + L EE V E H R AVE E E+ + Sbjct: 213 GKIISFINRDELAHSKFISEVIRAILGENPELQTEELV--EYTHEAFRHAVELETEWSEE 270 Query: 438 ALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTPNPFDWMELIS---LQGKTNF 492 L + G++ + M Y+++ A+++L LG L+ ++ N W++ + + KT+F Sbjct: 271 VLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDF 329 Query: 493 FEKRVGEYQKANVTTSATD 511 FE R Y+K N+ D Sbjct: 330 FEMRNSSYKKTNMDNGFDD 348
gb|EAL35456.1| ribonucleotide reductase small subunit [Cryptosporidium hominis] (369 aa) Score: 87 bits (214), Expect: 1.19483e-15 Length: 309, Idn/Pos/Gap = 71/138/48 (22%/44%/15%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R+ LFPIK+ +++ YK++ SFWTAE I D + +L + + ++ FA Sbjct: 24 RWVLFPIKYSRLWSLYKKYEVSFWTAEVISPMED----KTKLMNMDERLLDYIEMVFAKR 79 Query: 268 ---DGIVLEN--LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--ER 320 D L+ L + V++PEAR ++ F + MENI+ E + ++ K+ E E+ Sbjct: 80 IYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENIYKELFMNYVEMLRKNKEKNEK 139 Query: 321 T----------------------HLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFA 358 T +L + + + + + D F E+L+ + Sbjct: 140 TDEVEKKDENNLNSKISKEEYEYNLEKKLNELEDFTKMKELVGNFYDEDTLFSEKLIYYV 199 Query: 359 AVEGIFFSGSFCAIFWLKKRGLMPGLTFSN---------ELISRDEGLHCDFACHLYSML 409 ++ IF S +I L+ M ++ S + I RDE +F + + Sbjct: 200 IIKKIFSS----SIHLLRLSFSMRNISESELPTQLCDGLDRIRRDEQYQVEFCLSIAESM 255 Query: 410 PAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYD 469 + + +++ +++ A+ EK F+ + ++ + ++ + A++ F AD +LV+L Y Sbjct: 256 --KTKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQIEREDIVAFLLFNADEILVDLKYP 313 Query: 470 RLWNTPNPF 478 R +N NPF Sbjct: 314 RQFNVSNPF 322
ref|ZP_00210651.1| COG0208: Ribonucleotide reductase, beta subunit [Ehrlichia canis str. Jake] (324 aa) Score: 86 bits (213), Expect: 1.62698e-15 Length: 306, Idn/Pos/Gap = 80/134/21 (26%/43%/6%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P ++ + W EE+ LA D+ W+ L+E E+ + + FF +D I + Sbjct: 12 PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTVLSEKEKNLLVQIFRFFTQAD-IEV 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIA-MENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N R ++ P C + ME IH YS L+D + PE F E M Sbjct: 71 NNCYMRHYSNIFKPTEVCMMLAAFSNMETIHIAAYSYLLDT-IGMPEIEYQAFLKFEVM- 128 Query: 332 CVRRKAYWAIRWIGSDASFQERLVA-----FAA-VEGIFFSGSFCAIFWLKKRGLMPGLT 385 +K Y ++ +R VA F A EG+ SF + ++ G M G+ Sbjct: 129 ---KKKYDYMQKFEECRKNDKRHVAKTLAVFGAFTEGLQLFASFAILLNFQRFGKMKGMG 185 Query: 386 FSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMIRDAVECEKEFVCDALP 440 RDE LH + L++ E + ++ + V E EF+ A Sbjct: 186 QIIAWSVRDETLHTESIIRLFNTFVQENYEIWDDSLKHELYEACKIIVSLEDEFINLAFA 245 Query: 441 VSLI-GMNQQLMSAYIEFVADRLLVELGYDRLWN-TPNPFDWM-ELISLQGKTNFFEKRV 497 + G++ + + YI ++A+R L++L + +++ NP W+ E+++ TNFFE RV Sbjct: 246 CGDVEGLSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVEHTNFFENRV 305 Query: 498 GEYQKA 503 EY +A Sbjct: 306 TEYARA 311
gb|AAK82236.1| 376L [Chilo iridescent virus] ref|NP_149839.1| 376L [Invertebrate iridescent virus 6] (360 aa) Score: 86 bits (212), Expect: 2.00435e-15 Length: 343, Idn/Pos/Gap = 82/140/48 (23%/40%/13%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P+ + + +H S W E+ + D++ W+NRL + +R F++++ FF D V Sbjct: 12 PFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVA 71 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPC 332 +++ ++PE G E +H + YS L++ + PE F E M Sbjct: 72 SAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLET-LGMPEATYKEFLMYEEMKD 130 Query: 333 VRR--KAYWAIRWI---GSDASFQERLVAFAA--------VEGIFFSGSFCAIFWLKKRG 379 + K + R I G + E AA EG+ +F + G Sbjct: 131 KQDYIKKFSDSRHILGKGEENLTTEDKEHIAAGIALFSGFTEGMQLFSTFAMLLIFPLNG 190 Query: 380 LMPGLTFSNELISRDEGLHCDFACHLYSML---------PAEERVPAERIHSMIRDAVEC 430 M G+ DE H + L+ + P V E ++ + ++ V Sbjct: 191 FMKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPSVLQETVYKIAKEMVGL 250 Query: 431 EKEFVCDAL------PVS------------LIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 E+ F+ P++ G+ Q + AYI+++ADR L +GY ++ Sbjct: 251 EEAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIKYIADRRLNLMGYKSIF 310 Query: 473 N----TPNPFDWME-LISLQGKTNFFEKRVGEYQKANVTTSAT 510 N NP +E +I+ TNFFE R +Y ANV+T T Sbjct: 311 NLEPYPTNPLPELEIMINAPTHTNFFENRSTDY--ANVSTKGT 351
emb|CAB72700.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] pir||G81440 ribonucleoside-diphosphate reductase (EC 1.17.4.1) beta chain Cj0231c [imported] - Campylobacter jejuni (strain NCTC 11168) ref|NP_281426.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] (340 aa) Score: 85 bits (211), Expect: 3.14521e-15 Length: 295, Idn/Pos/Gap = 73/127/22 (24%/43%/7%) Query: 228 ASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPE 287 A+ W +E+D D +R LT E+ V + + D NLA+ + PE Sbjct: 48 ANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPE 107 Query: 288 ARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWI--- 344 Q E HS++Y+++++A + T L ME R+ I I Sbjct: 108 INAVLARQAYEEANHSKSYAVMVEAIC----DNTDLIYEMEKHDETLREKNDFISSIYEE 163 Query: 345 -GSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 D + L+A A +EG++F F AI+ L + G M G I RDE H Sbjct: 164 LAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDEITHLL 223 Query: 401 FACHLYSMLPAE-------ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSA 453 ++ + + E E + +I+ M + A + E ++ ++G ++ Sbjct: 224 LFQNMINSVRKERPDLFHDENI--NKIYDMFKKAGDLEIKWGKYITQNQIMGFTDDIIEE 281 Query: 454 YIEFVADRLLVELGYDRLWNTPNPFDWMELISL--QGKTNFFEKRVGEYQKANVT 506 YI ++ D+ L + D+L+N +P W++ S K+NFFE +V Y K +++ Sbjct: 282 YIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGSIS 336
emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] ref|YP_197210.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] (329 aa) Score: 85 bits (210), Expect: 3.33438e-15 Length: 318, Idn/Pos/Gap = 81/141/20 (25%/44%/6%) Query: 201 FKAEEADRYTLF-PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 FK D ++ P +P ++ + W EE+ LA D+ W+ L++ E+ + Sbjct: 4 FKMSLLDSRPIYKPFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTVLSDKEKNLLVQ 63 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIA-MENIHSETYSLLIDAYVKDPE 318 + FF +D I + N + ++ P C + ME IH YS L+D + PE Sbjct: 64 IFRFFTQAD-IEVNNCYMKHYSNIFKPTEICMMLSAFSNMETIHIAAYSYLLDT-IGMPE 121 Query: 319 ERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSG-----SFCAIF 373 F E M ++K + R+ + + + AV G F G SF + Sbjct: 122 IEYQAFLKFEVM---KKKYDYMQRFEECRKNDKRHVAKTLAVFGAFTEGLQLFASFAILL 178 Query: 374 WLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE-RVPAERIHSMIRDA----V 428 ++ G M G+ RDE LH + L++ E + + + + +A V Sbjct: 179 NFQRFGKMKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIV 238 Query: 429 ECEKEFVCDALPVSLI-GMNQQLMSAYIEFVADRLLVELGYDRLWN-TPNPFDWM-ELIS 485 E EF+ A + G++ Q + YI ++A+R L++L + +++ NP W+ E+++ Sbjct: 239 TLEDEFINLAFACGDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILN 298 Query: 486 LQGKTNFFEKRVGEYQKA 503 TNFFE RV EY +A Sbjct: 299 GVEHTNFFENRVTEYTRA 316
ref|YP_146765.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus kaustophilus HTA426] dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus kaustophilus HTA426] (346 aa) Score: 85 bits (210), Expect: 3.90719e-15 Length: 310, Idn/Pos/Gap = 80/143/24 (25%/46%/7%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I +P + YKR +A+FWT EI++A D+ + +LT+ E+ ++ A D I Sbjct: 36 IAYPWAYAKYKRMLANFWTPFEINMAQDVKQF-PQLTDREQDAFLKIIGLLALLDSI-QT 93 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 + A R + P E IH+ +YS ++ + V ++ +F P + Sbjct: 94 DYAGRVADYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKAKQ-DEVFDFWRNEPTL 152 Query: 334 RRKAYWAIRWIGSDASFQE-------RLVAFAAV-EGIFFSGSFCAIFWLKKRGLMPGLT 385 R++ + G A +E R + F + EG+FF F + L ++ M + Sbjct: 153 RKRNDFVTN--GYKAFAEEPNVENLLRSIVFDVILEGLFFYSGFAFFYNLARQQKMVATS 210 Query: 386 FSNELISRDEGLHCDFACHLYSMLP---AEERVP--AERIHSMIRDAVECEKEFVCDALP 440 I+RDE +H D ++ + E R P A+ + + A E E E+ + + Sbjct: 211 TMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWAREIIG 270 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNPFDWM---ELISLQGKTNFFEK 495 + G++ + AYI+F A+ +LG+DR ++ NP W+ E + L GK++FFE+ Sbjct: 271 NDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDL-GKSDFFEQ 329 Query: 496 RVGEYQKANV 505 + +Y K V Sbjct: 330 KPRQYTKVQV 339
emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Gardel] ref|YP_196255.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Gardel] (329 aa) Score: 85 bits (209), Expect: 4.28277e-15 Length: 318, Idn/Pos/Gap = 80/139/20 (25%/43%/6%) Query: 201 FKAEEADRYTLF-PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 FK D ++ P +P ++ + W EE+ LA D+ W+ L++ E+ + Sbjct: 4 FKMSLLDSRPIYKPFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTVLSDKEKNLLVQ 63 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIA-MENIHSETYSLLIDAYVKDPE 318 + FF +D I + N + ++ P C + ME IH YS L+D + PE Sbjct: 64 IFRFFTQAD-IEVNNCYMKHYSNIFKPTEICMMLSAFSNMETIHIAAYSYLLDT-IGMPE 121 Query: 319 ERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSG-----SFCAIF 373 F E M ++K + R+ + + + AV G F G SF + Sbjct: 122 IEYQAFLKFEVM---KKKYDYMQRFEECRKNDKRHVAKTLAVFGAFTEGLQLFASFAILL 178 Query: 374 WLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMIRDAV 428 ++ G M G+ RDE LH + L++ E + + ++ V Sbjct: 179 NFQRFGKMKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDGDLKKELYEACSVIV 238 Query: 429 ECEKEFVCDALPVSLI-GMNQQLMSAYIEFVADRLLVELGYDRLWN-TPNPFDWM-ELIS 485 E EF+ A + G++ Q + YI ++A+R L++L + +++ NP W+ E+++ Sbjct: 239 TLEDEFINLAFACGDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILN 298 Query: 486 LQGKTNFFEKRVGEYQKA 503 TNFFE RV EY +A Sbjct: 299 GVEHTNFFENRVTEYTRA 316
ref|YP_178304.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni RM1221] gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter jejuni RM1221] (340 aa) Score: 85 bits (209), Expect: 4.5784e-15 Length: 295, Idn/Pos/Gap = 73/127/22 (24%/43%/7%) Query: 228 ASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPE 287 A+ W +E+D D +R LT E+ V + + D NLA+ + PE Sbjct: 48 ANTWFPKEVDTTKDALDYRCNLTVGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPE 107 Query: 288 ARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWI--- 344 Q E HS++Y+++++A + T L ME R+ I I Sbjct: 108 INAVLARQAYEEANHSKSYAVMVEAIC----DNTDLIYEMEKHDETLREKNDFISSIYEE 163 Query: 345 -GSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 D + L+A A +EG++F F AI+ L + G M G I RDE H Sbjct: 164 LAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDEITHLL 223 Query: 401 FACHLYSMLPAE-------ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSA 453 ++ + + E E + +I+ M + A + E ++ ++G ++ Sbjct: 224 LFQNMINSVRKERPDLFHDENI--NKIYDMFKKAGDLEIKWGKYITQNQIMGFTDDIIEE 281 Query: 454 YIEFVADRLLVELGYDRLWNTPNPFDWMELISL--QGKTNFFEKRVGEYQKANVT 506 YI ++ D+ L + D+L+N +P W++ S K+NFFE +V Y K +++ Sbjct: 282 YIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGSIS 336
ref|YP_180191.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia ruminantium str. Welgevonden] gb|AAL08816.1| hypothetical ribonucleoside reductase beta chain [Cowdria ruminantium] (324 aa) Score: 85 bits (209), Expect: 4.85377e-15 Length: 305, Idn/Pos/Gap = 78/136/19 (25%/44%/6%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 P +P ++ + W EE+ LA D+ W+ L++ E+ + + FF +D I + Sbjct: 12 PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTVLSDKEKNLLVQIFRFFTQAD-IEV 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIA-MENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N + ++ P C + ME IH YS L+D + PE F E M Sbjct: 71 NNCYMKHYSNIFKPTEICMMLSAFSNMETIHIAAYSYLLDT-IGMPEIEYQAFLKFEVM- 128 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSG-----SFCAIFWLKKRGLMPGLTF 386 ++K + R+ + + + AV G F G SF + ++ G M G+ Sbjct: 129 --KKKYDYMQRFEECRKNDKRHVAKTLAVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQ 186 Query: 387 SNELISRDEGLHCDFACHLYSMLPAEE-RVPAERIHSMIRDA----VECEKEFVCDALPV 441 RDE LH + L++ E + + + + +A V E EF+ A Sbjct: 187 IIAWSVRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFINLAFAC 246 Query: 442 SLI-GMNQQLMSAYIEFVADRLLVELGYDRLWN-TPNPFDWM-ELISLQGKTNFFEKRVG 498 + G++ Q + YI ++A+R L++L + +++ NP W+ E+++ TNFFE RV Sbjct: 247 GDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNFFENRVT 306 Query: 499 EYQKA 503 EY +A Sbjct: 307 EYTRA 311
ref|YP_099978.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis YCH46] dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis YCH46] (349 aa) Score: 84 bits (208), Expect: 5.64034e-15 Length: 311, Idn/Pos/Gap = 82/139/28 (26%/44%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 +++ + ++Y++ + +FW EEI+L D + + LT AER +L+F D + Sbjct: 39 MRYKWVSDWYRQGMNNFWIPEEINLTQDTKDYPH-LTPAERTAYDKILSFLVFLDSLQSN 97 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 NL + E Q E +HS++YS ++D+ + PEER + +T + Sbjct: 98 NLPT-LSEYITANEVNLCLHIQAFQECVHSQSYSYMLDS-ICSPEERNDILYQWKTDEHL 155 Query: 334 RRKAYWAIRWIGSDAS-FQER---------LVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 R+ +IG+ + FQE L+A +EGI+F F + L + G M G Sbjct: 156 LRRN----TFIGNCYNEFQENRDGFALMKTLIANYILEGIYFYSGFMFFYNLSRNGKMSG 211 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEER---VP--AERIHSMIRDAVECEKEFVCDA 438 I+RDE H ++ L EE P + M+R+ V+ E + Sbjct: 212 SAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYV 271 Query: 439 LPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW----NTPNPFDWMELISLQG--KTNF 492 + + G+N+Q++S YI F+ + LGY L+ P W+ S KT+F Sbjct: 272 IGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDF 331 Query: 493 FEKRVGEYQKA 503 FE + Y K+ Sbjct: 332 FEAKSTAYAKS 342
gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides fragilis] (349 aa) Score: 84 bits (208), Expect: 6.66466e-15 Length: 311, Idn/Pos/Gap = 82/139/28 (26%/44%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 +++ + ++Y++ + +FW EEI+L D + + LT AER +L+F D + Sbjct: 39 MRYKWVSDWYRQAMNNFWIPEEINLTQDTKDYPH-LTPAERTAYDKILSFLVFLDSLQSN 97 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 NL + E Q E +HS++YS ++D+ + PEER + +T + Sbjct: 98 NLPT-LSEYITANEVNLCLHIQAFQECVHSQSYSYMLDS-ICSPEERNDILYQWKTDEHL 155 Query: 334 RRKAYWAIRWIGSDAS-FQER---------LVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 R+ +IG+ + FQE L+A +EGI+F F + L + G M G Sbjct: 156 LRRN----TFIGNCYNEFQENRDGFALMKTLIANYILEGIYFYSGFMFFYNLSRNGKMSG 211 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEER---VP--AERIHSMIRDAVECEKEFVCDA 438 I+RDE H ++ L EE P + M+R+ V+ E + Sbjct: 212 SAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYV 271 Query: 439 LPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW----NTPNPFDWMELISLQG--KTNF 492 + + G+N+Q++S YI F+ + LGY L+ P W+ S KT+F Sbjct: 272 IGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDF 331 Query: 493 FEKRVGEYQKA 503 FE + Y K+ Sbjct: 332 FEAKSTAYAKS 342
emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain [Bacteroides fragilis NCTC 9343] ref|YP_212331.1| putative ribonucleoside-diphosphate reductase beta chain [Bacteroides fragilis NCTC 9343] (349 aa) Score: 84 bits (208), Expect: 7.0068e-15 Length: 311, Idn/Pos/Gap = 82/139/28 (26%/44%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 +++ + ++Y++ + +FW EEI+L D + + LT AER +L+F D + Sbjct: 39 MRYQWVSDWYRQAMNNFWIPEEINLTQDTKDYPH-LTPAERTAYDKILSFLVFLDSLQSN 97 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 NL + E Q E +HS++YS ++D+ + PEER + +T + Sbjct: 98 NLPT-LSEYITANEVNLCLHIQAFQECVHSQSYSYMLDS-ICSPEERNDILYQWKTDEHL 155 Query: 334 RRKAYWAIRWIGSDAS-FQER---------LVAFAAVEGIFFSGSFCAIFWLKKRGLMPG 383 R+ +IG+ + FQE L+A +EGI+F F + L + G M G Sbjct: 156 LRRN----TFIGNCYNEFQENRDGFALMKTLIANYILEGIYFYSGFMFFYNLSRNGKMSG 211 Query: 384 LTFSNELISRDEGLHCDFACHLYSMLPAEER---VP--AERIHSMIRDAVECEKEFVCDA 438 I+RDE H ++ L EE P + M+R+ V+ E + Sbjct: 212 SAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWGQYV 271 Query: 439 LPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW----NTPNPFDWMELISLQG--KTNF 492 + + G+N+Q++S YI F+ + LGY L+ P W+ S KT+F Sbjct: 272 IGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVKTDF 331 Query: 493 FEKRVGEYQKA 503 FE + Y K+ Sbjct: 332 FEAKSTAYAKS 342
ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium thermophilum IAM 14863] dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium thermophilum IAM 14863] (346 aa) Score: 84 bits (207), Expect: 8.21049e-15 Length: 291, Idn/Pos/Gap = 77/132/21 (26%/45%/7%) Query: 229 SFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEA 288 +FW EE+ L D + LT E++ +L+F D I+ ++ + V PE Sbjct: 53 NFWIPEEVPLLDDAKQYL-ELTADEQWAYDRMLSFVIFMDSILTVSMPN-LINYVTAPEI 110 Query: 289 RCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAM--ETMPCVRRKAYWAIRWI-- 344 E +HS++Y ++++ V P ER + E + R Y A + Sbjct: 111 NMCLSIHNFHEALHSKSYGYVLESVV--PAERRQYIYDLWREDRQLLERNRYIANTFQLF 168 Query: 345 ---GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 +D F +A +EGI+F F + L + G M G + I+RDE H Sbjct: 169 ADNPTDEHFVRACMAQYVLEGIYFYSGFAFFYALARMGKMKGTATEIQFINRDEITHVAV 228 Query: 402 ACHLYSMLPAEE------RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 ++ + L E ++ A+ + +MIR A E E + + + G++ +++ Y+ Sbjct: 229 FQNILNGLRQERPQLFTPQLDAD-LRAMIRQAAEHEMAWAAYCVGNRIQGLSGEVLQGYV 287 Query: 456 EFVADRLLVELGYDRLW-NTPNPFDWMELIS--LQGKTNFFEKRVGEYQKA 503 + +AD+ LG++ L+ N PNP W+E S Q K +FFE RV Y K+ Sbjct: 288 KHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADFFETRVTNYAKS 338
gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii] (336 aa) Score: 83 bits (206), Expect: 1.02851e-14 Length: 321, Idn/Pos/Gap = 86/131/25 (26%/40%/7%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHW--------RNRLTEAERYFVSHVLAFF 264 P +P +E + W EE+ LA D+ W ++ LT E++ ++ + FF Sbjct: 12 PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKYNLTPGEKHLLTPGEKHLLTQIFRFF 71 Query: 265 AASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLF 324 +D V + + R + E ME +H YS L+D V PE F Sbjct: 72 TQADIEVNNCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDT-VGMPEVEYSAF 130 Query: 325 RAMETMPCVRRKAYWAIRWIGSDAS--FQERLVAFAA-VEGIFFSGSFCAIFWLKKRGLM 381 + M + Y ++ G DA L F A EG+ SF + + M Sbjct: 131 LKYKEM----KDKYDYMQQFGVDAKEDIATTLAVFGAFTEGLQLFASFAIMLNFPRFNKM 186 Query: 382 PGLTFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVC 436 G+ RDE LH + L+ E +RI+ V E F+ Sbjct: 187 KGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFIE 246 Query: 437 DALPVSLI-GMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFDWM-ELISLQGKTNFF 493 A V I G+ + YI ++ADR L++LG ++ NP W+ E+++ TNFF Sbjct: 247 LAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNFF 306 Query: 494 EKRVGEYQKANVTTSATDNVF 514 E R EY KA TT + + VF Sbjct: 307 ENRTTEYSKA-ATTGSWEEVF 326
ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate China] gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate China] (374 aa) Score: 83 bits (204), Expect: 1.65484e-14 Length: 300, Idn/Pos/Gap = 74/132/19 (24%/44%/6%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWR-NRLTEAERYFVSHVLAFFAASD--- 268 P +P E H WT +EI LA D+ W+ +L + E+ F++ +L F D Sbjct: 73 PFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEKKFITQILRLFTQLDVSV 132 Query: 269 GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAME 328 G + N ++ EI C + + E H + Y+LL D + PE F + Sbjct: 133 GQLYHNTFIPIFKNNEIRNMLCSFACR---EGTHQQAYALLNDT-LGLPESDYSAFLKYK 188 Query: 329 TMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 388 M + + + + + LV EG+ +F + ++ G+M G+ Sbjct: 189 QM--TDKTDFMSDMRTDTIGNVAFSLVKAVYNEGVSLFAAFVMLLNFQRFGVMKGMGKVV 246 Query: 389 ELISRDEGLHCDFACHLYSMLPAE-----ERVPAERIHSMIRDAVECEKEFVCDALPVS- 442 E RDE +H + C L+ + +E + + + ++ ++ ++ E FV D + + Sbjct: 247 EWSIRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFV-DLVFIED 305 Query: 443 -LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWME-LISLQGKTNFFEKRVGEY 500 L + + + Y++++ R V+LG + NP W+ LIS + TNFFE RV EY Sbjct: 306 KLKNLKRVDVINYVKYILQRRTVQLGLSNKTDLQNPILWVSWLISGRDVTNFFENRVTEY 365
ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803] dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803] pir||S76940 hypothetical protein - Synechocystis sp. (strain PCC 6803) (355 aa) Score: 81 bits (199), Expect: 7.18649e-14 Length: 299, Idn/Pos/Gap = 76/135/28 (25%/45%/9%) Query: 222 FYKRHVASFWTAEEIDLAADM-DHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFM 280 Y++ +FW + +D+ D+ D+W LT ERY +L++ D + N+ Sbjct: 53 LYQQMRENFWIPQRLDITQDVTDYWN--LTNEERYAFDGILSYLTFLDSVQTCNIPH-LK 109 Query: 281 RDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA-YW 339 V PE QI+ E +H+++Y +I+ + E+R ++ T ++ + Y Sbjct: 110 SSVTAPEISLCMAEQISQEGMHNQSYQYMIETIIPT-EKRDKVYEFWRTDRVLKERCEYI 168 Query: 340 AIRWIG-SDASFQER----LVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 394 A+ + D QE L+A +EG++F F + L R LMPG ++I+RD Sbjct: 169 AMLYQKYVDHPTQENYFIALMADYLLEGLYFYNGFIYFYNLASRMLMPGSADIFKMINRD 228 Query: 395 EGLHCDFACHLYS-MLPAEERV---PAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQL 450 E H LY ++P +V ++I+ M AVE E + + +++G+ + Sbjct: 229 ELSH----VRLYQKLIPEAMQVFTHSTDQIYEMFDKAVEFECRWTNHIVGNNILGITESS 284 Query: 451 MSAYIEFVADRLLVELGYDRLWNTP----NPFDWMELIS-----LQGKTNFFEKRVGEY 500 Y +++A+ L +G D L+ +P+ +E S K NFFE V Y Sbjct: 285 TEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEAHTKANFFEATVTSY 343
ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus 1] (378 aa) Score: 80 bits (197), Expect: 1.13715e-13 Length: 308, Idn/Pos/Gap = 78/131/25 (25%/42%/8%) Query: 210 TLF-PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRN-RLTEAERYFVSHVLAFFAAS 267 T+F P + E H WT +E+ LA D+ W+ +LT E+ F+ +L F Sbjct: 70 TVFKPFHYSWAVEIRALHENIHWTEKELSLADDVSDWKTGKLTLFEKDFIIQILRLFTQL 129 Query: 268 D---GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLF 324 D G + N+ ++ E+ C + + E H + Y+LL D + PE F Sbjct: 130 DVSVGHIYHNIFIPIFKNNELRNMLCSFACR---EGTHQQAYALLNDT-LGLPETEYSTF 185 Query: 325 RAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 + M + Y + + L+ EG+ SF + ++ G M G+ Sbjct: 186 LNYKEM--TNKTIYMNDMKTDNLSEIALSLIKAVYNEGVVLFASFAMLLNFQRFGTMKGM 243 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEER-VPAERIHSMIR----DAVECEKEFVCDAL 439 E RDE +H + C L+ +E + E S +R + ++ E +F+ Sbjct: 244 GKVIEWSIRDENIHVEGLCKLFKTFISEYSFILTEEFFSAVRKIQAEVLQLETDFIILLF 303 Query: 440 P--VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT----PNPFDWME-LISLQGKTNF 492 + G+ + M Y++++ R +LG L +T NP DW+ LI+ + TNF Sbjct: 304 TNITEIKGLTKLCMINYVKYILQRRTEQLGL--LESTEVLLTNPIDWISWLIAGRNITNF 361 Query: 493 FEKRVGEY 500 FE RV EY Sbjct: 362 FENRVTEY 369
ref|NP_906664.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella succinogenes DSM 1740] emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella succinogenes] (283 aa) Score: 78 bits (192), Expect: 4.07601e-13 Length: 278, Idn/Pos/Gap = 64/118/10 (23%/42%/3%) Query: 238 LAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIA 297 + D + LT AE+ L+ D + NL + + PE Q Sbjct: 1 MTPDKRDYNGGLTPAEKLGYDRALSQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAF 60 Query: 298 MENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRK---AYWAIRWIGSDASFQERL 354 E +HS++Y++++++ + +E ++R + Y + +D++ + + Sbjct: 61 EEALHSQSYAVMVESISANTDEIYEMWRVDMQLKSKNDHIAGVYEELAKNPTDSAMLKAM 120 Query: 355 VAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE- 413 A +EGI+F F + L + G M G I RDE H ++ + L E Sbjct: 121 FANQILEGIYFYAGFSFFYTLARSGKMLGSAQMIRFIQRDEVTHLLIFQNMINALKKERP 180 Query: 414 ----RVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYD 469 + E + M R AV E + ++G+ +++ YI+++AD L +G Sbjct: 181 DLFTKSLEEEVVEMFRKAVAVESAWGDYITQGQILGLTSEIIHEYIQYLADDRLKRVGMP 240 Query: 470 RLWNTPNPFDWMELISL--QGKTNFFEKRVGEYQKANV 505 L+N +P W++ S + KTNFFE V Y K ++ Sbjct: 241 ILYNAKHPIKWVDQFSSFNEQKTNFFEGNVTNYAKGSI 278
gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas axonopodis pv. citri str. 306] ref|NP_644373.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas axonopodis pv. citri str. 306] (347 aa) Score: 78 bits (192), Expect: 4.46781e-13 Length: 320, Idn/Pos/Gap = 74/137/31 (23%/42%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK +FW +E+D+ D + N L+ E+ ++ A D Sbjct: 37 IPYPSFYRAYKELSTNFWIPDEVDMKGDARQY-NELSAREKNAYDSIIGLLATLDSPQTR 95 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P A E IH+E+YS ++ A + ++ +F T Sbjct: 96 FIYNVAE-YITD---PAAHANAAIIGQQEVIHNESYSYVL-ASITGLADQNRVFEIARTH 150 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + L+ + +EGI F F + L ++ M G Sbjct: 151 PTIIKRNAPIMGAYEDFMREKTAETLIRSLIQSSILEGINFYSGFAYFYNLVRQNRMTGT 210 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERV-----PAERIHSMIRDAVECEKEFVCDAL 439 I+RDE H F L + E + + +H A++ E ++ + L Sbjct: 211 GKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL 270 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNP--FDWMELIS---LQGKTNFFE 494 + G++ M Y+++ A+++ LG ++L+ N W++ + + KT+FFE Sbjct: 271 D-GIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFE 329 Query: 495 KRVGEYQKANVTTSATDNVF 514 R Y+K N +DN F Sbjct: 330 MRNASYKKTN-----SDNGF 344
ref|YP_199114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] (347 aa) Score: 77 bits (190), Expect: 7.43254e-13 Length: 320, Idn/Pos/Gap = 74/137/31 (23%/42%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK +FW +E+D+ D + N L+ E+ ++ A D Sbjct: 37 IPYPSFYRAYKELSTNFWIPDEVDMKGDARQY-NELSAREKNAYDSIIGLLATLDSPQTR 95 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P A E IH+E+YS ++ A + ++ +F T Sbjct: 96 FIYNVAE-YITD---PAAHANAAIIGQQEVIHNESYSYVL-ASITGLADQNRVFEIARTH 150 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + L+ + +EGI F F + L ++ M G Sbjct: 151 PTIIKRNAPIMGAYEDFMREKTAETLIRSLIQSSILEGINFYSGFAYFYNLVRQNRMTGT 210 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERV-----PAERIHSMIRDAVECEKEFVCDAL 439 I+RDE H F L + E + + +H A++ E ++ + L Sbjct: 211 GKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWTAEVL 270 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNP--FDWMELIS---LQGKTNFFE 494 + G++ M Y+++ A+++ LG ++L+ N W++ + + KT+FFE Sbjct: 271 D-GIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFE 329 Query: 495 KRVGEYQKANVTTSATDNVF 514 R Y+K N +DN F Sbjct: 330 MRNASYKKTN-----SDNGF 344
ref|YP_194958.1| ribonucleotide reductase beta subunit [Grouper iridovirus] gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus] (384 aa) Score: 77 bits (190), Expect: 8.14699e-13 Length: 330, Idn/Pos/Gap = 86/137/55 (26%/41%/16%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRN-RLTEAERYFVSHVLAFFAASD--- 268 P K+ + +H W E++L D+ W++ LT+ E+ F+S VL F D Sbjct: 76 PFKYSWAEDVRVKHERIHWVETEVNLRDDVTDWKSGALTQQEKEFISCVLRLFTQLDVEV 135 Query: 269 -GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLID----------AYV--K 315 G+ L+ L + F + E R E IH + YSLL D A+V K Sbjct: 136 GGLYLDFLTQVF----KCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCEYSAFVAYK 191 Query: 316 DPEERTHLFRAME--TMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIF 373 + ++ ++M+ T+P + R + A+ EG+ +F + Sbjct: 192 EMTDKLDFMKSMDVSTIPNLARSLFKAV-----------------LNEGVSLFAAFVMLL 234 Query: 374 WLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRD------- 426 +KRG M G+ E RDE +H + L+ L AE P ++RD Sbjct: 235 AFQKRGRMKGMGKVVEWSVRDENIHVEGVSRLFETLCAE--YPWLMTEKLVRDCKKDAER 292 Query: 427 AVECEKEFVCDALPV--SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP---NPFDWM 481 A E E F+ A +L G+ + Y+ +V + +G +L + NP W+ Sbjct: 293 AAELEFAFIDLAFSYCPALDGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWV 352 Query: 482 E-LISLQGKTNFFEKRVGEYQKANVTTSAT 510 + LI TNFFE V EY+ +T S T Sbjct: 353 KWLIEGADLTNFFENHVTEYETGGLTGSWT 382
ref|ZP_00038909.1| COG0208: Ribonucleotide reductase, beta subunit [Xylella fastidiosa Dixon] (349 aa) Score: 77 bits (190), Expect: 8.28408e-13 Length: 320, Idn/Pos/Gap = 76/135/31 (23%/42%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK +FW +E+D+ D + L+ E+ ++ A D Sbjct: 39 IPYPSFYRAYKELSTNFWIPDEVDMKIDKRQY-GELSAREKNAYDAIIGLLATLDSPQTR 97 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P A E IH+E+YS ++ A + D + +F T Sbjct: 98 FIYNVAE-YITD---PAAHANAAIIGQQEVIHNESYSYVL-ASITDLANQNRVFEIARTH 152 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + L+ + +EGI F F + L ++ M G Sbjct: 153 PTILKRNAPIMQAYDDFMREKTAETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGT 212 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDAL 439 I+RDE H F + + E + +H A+E E ++ + L Sbjct: 213 GKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL 272 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTPNPFDWMELIS---LQGKTNFFE 494 + G++ + M Y+++ A+++ LG + L+ T N W+ + + KT+FFE Sbjct: 273 N-GIDGIDVEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKTDFFE 331 Query: 495 KRVGEYQKANVTTSATDNVF 514 R Y+K NV DN F Sbjct: 332 MRNASYKKTNV-----DNCF 346
ref|ZP_00200742.1| COG0208: Ribonucleotide reductase, beta subunit [Exiguobacterium sp. 255-15] (347 aa) Score: 77 bits (190), Expect: 8.49406e-13 Length: 332, Idn/Pos/Gap = 78/145/24 (23%/43%/7%) Query: 190 DTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRL 249 D R + AI E + I +P+ + YK+ +++FW +EI ++ DM W N+L Sbjct: 11 DARHPNRATAIIGGETSSIVNWNDIAYPQFYSIYKQLLSNFWIPDEISMSKDMQQW-NQL 69 Query: 250 TEAERYFVSHVLAFFAASDGIVLENLAER--FMRDVEIPEARCFYGFQIAMENIHSETYS 307 +E E+ ++ + D + + E F D I Q E +H+++YS Sbjct: 70 SEREQDAFKRIIGLLSILDSVQTRYILESAMFTSDASIHAILAIVAQQ---EVVHNQSYS 126 Query: 308 LLIDAYVKDPEERTHLFRAMETMPCVRRKA-----YWAIRWIGSDASFQERLVAFAAVEG 362 ++ + V E+ A + ++R A Y + + +F + LVA +EG Sbjct: 127 YVLSSLVPLSEQNRIFDIAKDDDMVMKRNAFILDLYEDFQNDRTPENFAKSLVASIVLEG 186 Query: 363 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLY-SMLPAEERVPAER-- 419 I F F + L + M G + I RDE H F L ++L + A+ Sbjct: 187 INFYSGFAFFYNLARHQKMVGTSTMISYIQRDELQHSYFISQLLRAVLTEHPDIDADGSF 246 Query: 420 ---IHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NT 474 +++ AV+ E E+ + + L G++ M Y++++A++ L +G D L+ + Sbjct: 247 TKFVYATFERAVDLEIEW-SEYVLRDLDGLDVSEMRDYVKYLANKRLRVIGLDDLYEGHD 305 Query: 475 PNPFDWMELISLQG----KTNFFEKRVGEYQK 502 + W+ S K++FFE++ Y K Sbjct: 306 EDVMPWIRAYSDDSMNATKSDFFEQKSRSYAK 337
ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] (225 aa) Score: 77 bits (189), Expect: 1.06403e-12 Length: 219, Idn/Pos/Gap = 64/105/17 (29%/47%/7%) Query: 298 MENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAF 357 ME IH YS L+D + PE F + M R+K + + + S ++ + Sbjct: 9 METIHIAAYSYLLDT-IGMPESEYQAFLKYDAM---RKKYEYMLEFEESKKHDKKHVAKT 64 Query: 358 AAVEGIFFSG-----SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE 412 AV G F G SF + ++ G M G+ +RDE LH + L++ E Sbjct: 65 LAVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQIIAWSARDETLHTNSIIMLFNTFIKE 124 Query: 413 -----ERVPAERIHSMIRDAVECEKEFVCDALPVSLI-GMNQQLMSAYIEFVADRLLVEL 466 + E ++S R VE E EF+ A + + G++ + + YI +VA+R L++L Sbjct: 125 NNEIWDNEFKEELYSACRTIVELEDEFIKLAFDLGDVEGLSAEEVRNYIRYVANRRLMQL 184 Query: 467 GYDRLWNT-PNPFDWM-ELISLQGKTNFFEKRVGEYQKA 503 G + +++ NP W+ E+++ TNFFE RV EY +A Sbjct: 185 GLESIYDVNDNPIPWLDEILNGVEHTNFFENRVTEYSRA 223
ref|ZP_00040481.1| COG0208: Ribonucleotide reductase, beta subunit [Xylella fastidiosa Ann-1] (349 aa) Score: 77 bits (188), Expect: 1.20589e-12 Length: 320, Idn/Pos/Gap = 76/134/31 (23%/41%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK +FW +E+D+ D + L+ E+ ++ A D Sbjct: 39 IPYPSFYRAYKELSTNFWIPDEVDMKIDKRQY-GELSAREKNAYDAIIGLLATLDSPQTR 97 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P A E IH+E+YS ++ A + D + +F T Sbjct: 98 FIYNVAE-YITD---PAAHANAAIIGQQEVIHNESYSYVL-ASITDLANQNRVFEIARTH 152 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + L+ + +EGI F F + L ++ M G Sbjct: 153 PTILKRNAPIMQAYDDFMREKTAETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGT 212 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDAL 439 I+RDE H F + + E + +H A+E E ++ + L Sbjct: 213 GKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL 272 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTPNPFDWMELIS---LQGKTNFFE 494 + G++ + M Y+++ A+++ LG L+ T N W+ + + KT+FFE Sbjct: 273 D-GIDGIDVEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFE 331 Query: 495 KRVGEYQKANVTTSATDNVF 514 R Y+K NV DN F Sbjct: 332 MRNASYKKTNV-----DNCF 346
ref|NP_298487.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa 9a5c] ref|NP_778707.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa Temecula1] gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa Temecula1] gb|AAF84007.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa 9a5c] pir||D82710 ribonucleoside-diphosphate reductase beta chain XF1197 [imported] - Xylella fastidiosa (strain 9a5c) (346 aa) Score: 77 bits (188), Expect: 1.36667e-12 Length: 320, Idn/Pos/Gap = 76/134/31 (23%/41%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK +FW +E+D+ D + L+ E+ ++ A D Sbjct: 36 IPYPSFYRAYKELSTNFWIPDEVDMKIDKRQY-GELSAREKNAYDAIIGLLATLDSPQTR 94 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P A E IH+E+YS ++ A + D + +F T Sbjct: 95 FIYNVAE-YITD---PAAHANAAIIGQQEVIHNESYSYVL-ASITDLANQNRVFEIARTH 149 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + L+ + +EGI F F + L ++ M G Sbjct: 150 PTILKRNAPIMQAYDDFMREKTAETLLYSLIQSSILEGINFYSGFAYFYNLVRQNRMTGT 209 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEE-----RVPAERIHSMIRDAVECEKEFVCDAL 439 I+RDE H F + + E + +H A+E E ++ + L Sbjct: 210 GKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWTGEVL 269 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTPNPFDWMELIS---LQGKTNFFE 494 + G++ + M Y+++ A+++ LG L+ T N W+ + + KT+FFE Sbjct: 270 D-GIDGIDVEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKTDFFE 328 Query: 495 KRVGEYQKANVTTSATDNVF 514 R Y+K NV DN F Sbjct: 329 MRNASYKKTNV-----DNCF 343
ref|NP_639324.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] (347 aa) Score: 75 bits (185), Expect: 2.68645e-12 Length: 320, Idn/Pos/Gap = 74/136/31 (23%/42%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--- 270 I +P + YK +FW +E+D+ D + N L+ E+ ++ A D Sbjct: 37 IPYPSFYRAYKELSTNFWIPDEVDMKGDARQY-NELSAREKNAYDSIIGLLATLDSPQTR 95 Query: 271 VLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETM 330 + N+AE ++ D P A E IH+E+YS ++ A + ++ +F T Sbjct: 96 FIYNVAE-YITD---PAAHANAAIIGQQEVIHNESYSYVL-ASITGLADQNRVFEIARTH 150 Query: 331 PCVRRK------AYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGL 384 P + ++ AY + + L+ + +EGI F F + L ++ M G Sbjct: 151 PTIIKRNAPIMGAYDDFMRDKTAETLIRALIQSSILEGINFYSGFAYFYNLVRQNRMTGT 210 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEERV-----PAERIHSMIRDAVECEKEFVCDAL 439 I+RDE H F L + E + + +H A++ E + + L Sbjct: 211 GKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWTAEVL 270 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNP--FDWMELIS---LQGKTNFFE 494 + G++ M Y+++ A+++ LG ++L+ N W++ + + KT+FFE Sbjct: 271 D-GIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKTDFFE 329 Query: 495 KRVGEYQKANVTTSATDNVF 514 R Y+K N +DN F Sbjct: 330 MRNASYKKTN-----SDNGF 344
ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore grouper iridovirus] gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore grouper iridovirus] (384 aa) Score: 75 bits (184), Expect: 4.04331e-12 Length: 330, Idn/Pos/Gap = 84/137/55 (25%/41%/16%) Query: 213 PIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRN-RLTEAERYFVSHVLAFFAASD--- 268 P K+ + +H W E++L D+ W++ L++ E+ F+S VL F D Sbjct: 76 PFKYSWAEDIRVKHERIHWVETEVNLRDDVTDWKSGALSQQEKEFISCVLRLFTQLDVEV 135 Query: 269 -GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLID----------AYV--K 315 G+ L+ L + F + E R E IH + YSLL D A+V K Sbjct: 136 GGLYLDFLTQVF----KCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCEYSAFVAYK 191 Query: 316 DPEERTHLFRAME--TMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIF 373 + ++ ++M+ T+P + R + A+ EG+ +F + Sbjct: 192 EMTDKLDFMKSMDVSTIPNLARSLFKAV-----------------LNEGVSLFAAFVMLL 234 Query: 374 WLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRD------- 426 +K+G M G+ E RDE +H + L+ L AE P ++RD Sbjct: 235 AFQKKGRMKGMGKVVEWSVRDENIHVEGVSRLFETLCAE--YPWLMTEKLVRDCKKDAER 292 Query: 427 AVECEKEFVCDALPV--SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP---NPFDWM 481 A E E F+ A +L G+ + Y+ +V + +G +L + NP W+ Sbjct: 293 AAELEFAFIDLAFSYCPALDGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWV 352 Query: 482 E-LISLQGKTNFFEKRVGEYQKANVTTSAT 510 + LI TNFFE V EY+ +T S T Sbjct: 353 KWLIEGADLTNFFENHVTEYETGGLTGSWT 382
ref|NP_694009.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus iheyensis HTE831] dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus iheyensis HTE831] (347 aa) Score: 73 bits (179), Expect: 1.35571e-11 Length: 326, Idn/Pos/Gap = 77/147/30 (23%/45%/9%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 +F E + I +P ++ YKR V ++W A+E+++++D+ + + L++ E+ Sbjct: 23 LFGGESSGILNWNDIAYPHWYKMYKRLVGNYWQADEVNMSSDVKQF-STLSKEEQDAYLK 81 Query: 260 VLAFFAASDGIVLEN--LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYV--K 315 ++ + D L + D P + E +H+E+YS ++ + V Sbjct: 82 IIGLLSTLDAPQTRTALLISLYATD---PSVQSIMAVIAQQEAVHNESYSYVLSSVVSWN 138 Query: 316 DPEERTHLFRAMETMPCVRR-----KAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFC 370 + E L R E + ++R + Y A S + + LV + +EG+FF F Sbjct: 139 EQNEAFQLGRTDELL--LKRNEQLTEQYNAFVDNPSMENMLKTLVYTSLLEGMFFYSGFA 196 Query: 371 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAER-------IHSM 423 + L ++ M G + I+RDE H F L+ E P+ I+ Sbjct: 197 FFYHLARQNKMVGTSTMISYINRDELEHGRFITELFRATLEEN--PSHNNAEFIDWIYDR 254 Query: 424 IRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTPNPFDWM 481 + +VE E E+ L L G++ M YI++ A+++L +G + L+ + NP W+ Sbjct: 255 FQQSVELEIEWSHYVLN-KLEGIDMDDMDGYIKYRANKMLRMMGLEELYPQHVENPMKWV 313 Query: 482 E--LISLQG-KTNFFEKRVGEYQKAN 504 + + G KT+FFE++ +Y K + Sbjct: 314 RAYVDNFDGTKTDFFEQKSRQYTKTS 339
dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus halodurans C-125] sp|Q9KFH7|RIR2_BACHD Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus halodurans C-125] (345 aa) Score: 72 bits (175), Expect: 4.35989e-11 Length: 332, Idn/Pos/Gap = 70/145/22 (21%/43%/6%) Query: 190 DTRVRSHVPAIFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRL 249 DT + I + ++ ++ + YK +A+FWT EI+++ D + L Sbjct: 11 DTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPT-L 69 Query: 250 TEAERYFVSHVLAFFAASDGIVLEN--LAERFMRDVEIPEARCFYGFQIAMENIHSETYS 307 TE E+ ++ A D + + A ++ D + FQ E +H+++YS Sbjct: 70 TETEQEAFKKIIGLLAFLDSVQTDYSMRAAEYLTDSSLAALMSVLSFQ---EVVHNQSYS 126 Query: 308 LLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAI----RWIG--SDASFQERLVAFAAVE 361 ++ + V + +F + ++ + + I +++ + +F E +V +E Sbjct: 127 YVLSSLVPKATQ-DEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILE 185 Query: 362 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE-ERVPAERI 420 G+ F F + L + M + I+RDE LH +++ L E + E Sbjct: 186 GLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEET 245 Query: 421 HSMIR----DAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--T 474 + ++ A + EK++ + + G+N + M YI F+A++ V+LG ++ + Sbjct: 246 KTFVKTTLMKAADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIK 305 Query: 475 PNPFDWMELIS--LQGKTNFFEKRVGEYQKAN 504 NP W+ GK++FFE++ +Y K + Sbjct: 306 HNPMKWIRAYEDVNSGKSDFFEQKSRQYAKVS 337
pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At Neutral Ph pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At Neutral Ph (375 aa) Score: 69 bits (169), Expect: 1.81601e-10 Length: 312, Idn/Pos/Gap = 78/131/60 (25%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 +NT NP W+ Sbjct: 324 PFNTRSNPIPWI 335
pdb|1RIB|B Chain B, Protein R2 Of Ribonucleotide Reductase (E.C.1.17.4.1) pdb|1RIB|A Chain A, Protein R2 Of Ribonucleotide Reductase (E.C.1.17.4.1) pdb|1MRR|B Chain B, Protein R2 Of Ribonucleotide Reductase (E.C.1.17.4.1) Complex With Manganese (Substituted For Iron) pdb|1MRR|A Chain A, Protein R2 Of Ribonucleotide Reductase (E.C.1.17.4.1) Complex With Manganese (Substituted For Iron) (375 aa) Score: 69 bits (169), Expect: 2.18192e-10 Length: 312, Idn/Pos/Gap = 78/131/60 (25%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 +NT NP W+ Sbjct: 324 PFNTRSNPIPWI 335
dbj|BAD12265.1| p53-inducible ribonucleotide reductase small subunit 2 short form beta [Homo sapiens] (66 aa) Score: 69 bits (169), Expect: 2.21864e-10 Length: 55, Idn/Pos/Gap = 33/39/0 (60%/70%/0%) Query: 466 LGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 L D ++ NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 12 LDQDEVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 66
pdb|1RNR|B Chain B, Protein R2 Of Ribonucleotide Reductase (E.C.1.17.4.1) Mutant With Phe 208 Replaced By Tyr (F208y) Then Converted To Dopa (Dihydroxy Phenylalanine) pdb|1RNR|A Chain A, Protein R2 Of Ribonucleotide Reductase (E.C.1.17.4.1) Mutant With Phe 208 Replaced By Tyr (F208y) Then Converted To Dopa (Dihydroxy Phenylalanine) (340 aa) Score: 68 bits (167), Expect: 3.25667e-10 Length: 312, Idn/Pos/Gap = 78/131/60 (25%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 +NT NP W+ Sbjct: 324 PFNTRSNPIPWI 335
ref|YP_214728.1| NrdB [Cyanophage P-SSM4] gb|AAX46968.1| NrdB [Cyanophage P-SSM4] (387 aa) Score: 68 bits (167), Expect: 3.39541e-10 Length: 314, Idn/Pos/Gap = 77/127/53 (24%/40%/16%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 K+P + ++ + FW EE+ L D ++ +LT +++ + L + D + Sbjct: 42 KYPVFDKLTQQQLGYFWRPEEVSLQKDRGDYQ-QLTPEQKHIFTSNLKYQIMLDSVQGRA 100 Query: 275 LAERFMRDVEIPEAR-CFYGFQIAMENIHSETYSLLIDAYVKDPEE-------RTHLFRA 326 F +PE C +Q ME IHS +Y+ +I DP E T++ + Sbjct: 101 PGMAFAPYCSLPELEGCINVWQF-MEMIHSRSYTYIIKNVYSDPSEVFDTIIKDTNILQR 159 Query: 327 METMPCVRRKAY---------------WAIRWIGSDASFQER----------LVAFAAVE 361 E++ K+Y W G A +R + +E Sbjct: 160 AESVT----KSYDDFVNDAHEYDSGNAWKFAREGHPAGTLDRRELKRKLYRAIANVNILE 215 Query: 362 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML-----PAEERVP 416 GI F SF F + LM G LISRDE H + P + + Sbjct: 216 GIRFYVSFACSFAFGENKLMEGSAKILSLISRDESQHLVITQQILKKWADGDDPEMQEIA 275 Query: 417 AER---IHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRL 471 E + M R+ V EK + D L S+IG+N +L++ Y+E++A+R + +G D + Sbjct: 276 KEEKSFVKDMFRNTVNEEKAWA-DYLFKEGSMIGLNARLLNNYVEWIANRRMKAIGLDPI 334 Query: 472 WNTP---NPFDWME 482 ++ P NP W E Sbjct: 335 YDQPLRNNPLPWTE 348
ref|XP_595683.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53 inducible) [Bos taurus] (117 aa) Score: 68 bits (165), Expect: 6.73025e-10 Length: 50, Idn/Pos/Gap = 31/37/0 (62%/74%/0%) Query: 471 LWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVFALDIEF 520 ++ NPFD+ME ISL+GKTNFFEKRV EYQ+ V TDNVF LD +F Sbjct: 68 VFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFTLDADF 117
pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With Ferrous Ions At Neutral Ph pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With Ferrous Ions At Neutral Ph pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant Containing Oxo-Bridged Diferric Cluster pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant Containing Oxo-Bridged Diferric Cluster pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2 Subunit, D84e Mutant pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2 Subunit, D84e Mutant (375 aa) Score: 67 bits (164), Expect: 7.3159e-10 Length: 312, Idn/Pos/Gap = 77/131/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + + I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLESIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 +NT NP W+ Sbjct: 324 PFNTRSNPIPWI 335
ref|YP_207754.1| putative ribonucleoside diphosphate reductase I beta chain [Neisseria gonorrhoeae FA 1090] gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain [Neisseria gonorrhoeae FA 1090] (384 aa) Score: 67 bits (164), Expect: 7.8209e-10 Length: 304, Idn/Pos/Gap = 72/123/41 (23%/40%/13%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 ++FE ++ ++ FW EEID++ D + N L E E++ L + D I + Sbjct: 42 EVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN-LPEHEKHIFISNLKYQTLLDSIQGRSPN 100 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAMET 329 + V IPE + E IHS +Y+ +I V DP E ++ E Sbjct: 101 VALLPLVSIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAED 160 Query: 330 MPC-----VRRKAYW---------------AIRWIGSDASFQERLVAFAAVEGIFFSGSF 369 + C + Y+ + G L+ +E I F SF Sbjct: 161 IACYYDDLIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSF 220 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML------PAEERVPAE---RI 420 F +R LM G +LI+RDE LH H+ +++ P + AE Sbjct: 221 ACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDEC 280 Query: 421 HSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNP 477 + + A E EKE+ S+IG+N++++S Y+E++ + + +G + NP Sbjct: 281 FQLFKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNP 340 Query: 478 FDWM 481 W+ Sbjct: 341 IPWI 344
ref|NP_708125.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 301] gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 301] ref|NP_837840.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 2457T] gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella flexneri 2a str. 2457T] (389 aa) Score: 67 bits (163), Expect: 9.79705e-10 Length: 312, Idn/Pos/Gap = 77/130/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 49 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 107 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 108 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 164 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 165 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 224 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 225 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 279 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 280 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 337 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 338 PFQTRSNPIPWI 349
ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit [Escherichia coli K12] gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor [Escherichia coli] gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2; ribonucleoside-diphosphate reductase 1, beta subunit [Escherichia coli K12] sp|P69924|RIR2_ECOLI Ribonucleoside-diphosphate reductase 1 beta subunit (Ribonucleotide reductase 1) (B2 protein) (R2 protein) gb|AAG57364.1| ribonucleoside diphosphage reductase 1, beta subunit, B2 [Escherichia coli O157:H7 EDL933] dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia coli O157:H7] ref|NP_311145.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia coli O157:H7] pir||F91018 ribonucleoside-diphosphate reductase (EC 1.17.4.1) 1 beta chain [validated] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) pir||H85862 ribonucleoside-diphosphate reductase (EC 1.17.4.1) 1 beta chain [validated] - Escherichia coli (strain O157:H7, substrain EDL933) ref|NP_288809.1| ribonucleoside diphosphage reductase 1, beta subunit, B2 [Escherichia coli O157:H7 EDL933] sp|P69925|RIR2_ECO57 Ribonucleoside-diphosphate reductase 1 beta subunit (Ribonucleotide reductase 1) (B2 protein) (R2 protein) dbj|BAA16054.1| ribonucleoside-diphosphate reductase (EC 1.17.4.1) beta chain [Escherichia coli] (376 aa) Score: 67 bits (163), Expect: 1.03863e-09 Length: 312, Idn/Pos/Gap = 77/130/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 36 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 151 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 266 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 267 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 325 PFQTRSNPIPWI 336
pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2 From E. Coli In Its Oxidised (Met) Form pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2 From E. Coli In Its Oxidised (Met) Form pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Hydrogen Peroxide And Hydroxylamine pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Hydrogen Peroxide And Hydroxylamine pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Nitric Oxide pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli Oxidized By Nitric Oxide pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain (375 aa) Score: 67 bits (163), Expect: 1.09195e-09 Length: 312, Idn/Pos/Gap = 77/130/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 324 PFQTRSNPIPWI 335
ref|NP_754663.1| Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli CFT073] gb|AAN81231.1| Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli CFT073] (376 aa) Score: 67 bits (163), Expect: 1.09195e-09 Length: 312, Idn/Pos/Gap = 77/130/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 36 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 151 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 152 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 266 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 267 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 324 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 325 PFQTRSNPIPWI 336
ref|YP_155753.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR] gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR] (377 aa) Score: 67 bits (162), Expect: 1.23753e-09 Length: 309, Idn/Pos/Gap = 71/129/46 (22%/41%/14%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 KH + ++ ++ FW EEID++ D + N+LT +E++ L + D I + Sbjct: 33 KHSIFEKLIEKQISFFWRPEEIDVSRDRIDF-NKLTASEKHVFISNLKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVR 334 + V +PE + E IHS +Y+ ++ DP E +F + ++ Sbjct: 92 PNIALLPIVSLPELETWIETWSFFETIHSRSYTHILRNLFSDPSE---VFEDIVINEQIK 148 Query: 335 RKAYWAIRWI---------------------GSDASFQERLV---------AFAAVEGIF 364 +A ++ G + +R + + A+E I Sbjct: 149 IRANDISKYYDDLIFYTQLLQTHGEGDVVVEGKTHTVTQREIKKKLFLCINSVNALEAIR 208 Query: 365 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPA-ERIHSM 423 F SF F +R LM G +LI+RDE +H H+ ++ E P + I Sbjct: 209 FYVSFACTFAFAERELMEGNAKIIKLIARDENVHLTSTQHILNLWQYGEDDPEMKEIAEE 268 Query: 424 IRD--------AVECEKEFVCDALPV-SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT 474 +RD AV+ EK++ S+IG+N+ ++ Y+E++A+ + +G+D + Sbjct: 269 LRDDAYEIFMTAVKQEKQWAHYLFKDGSMIGLNESMLCQYVEYIANLRMQAIGFDAPFEN 328 Query: 475 --PNPFDWM 481 NP WM Sbjct: 329 QRSNPLPWM 337
pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e Mutant Of The R2 Subunit Of E. Coli Ribonucleotide Reductase) pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e Mutant Of The R2 Subunit Of E. Coli Ribonucleotide Reductase) (339 aa) Score: 67 bits (162), Expect: 1.2479e-09 Length: 312, Idn/Pos/Gap = 77/131/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + + I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLESIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 +NT NP W+ Sbjct: 324 PFNTRSNPIPWI 335
pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli (340 aa) Score: 66 bits (161), Expect: 1.60284e-09 Length: 312, Idn/Pos/Gap = 77/130/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 324 PFQTRSNPIPWI 335
ref|ZP_00286587.1| COG0208: Ribonucleotide reductase, beta subunit [Enterococcus faecium] (321 aa) Score: 66 bits (161), Expect: 1.74231e-09 Length: 300, Idn/Pos/Gap = 67/137/17 (22%/45%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR L++ E+ V HV D + E+ ++ +D Sbjct: 23 WEKLTEQFWLDTRIPLSNDLDDWRT-LSQLEKDTVGHVFGGLTLLDTVQSESGMDQLRKD 81 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V P ME++H+++YS + + +E +F T P +++KA I Sbjct: 82 VRTPHEEAVLNNIQFMESVHAKSYSSIFST-LNTKKEIEEIFDWTNTNPYLQKKAE-RIN 139 Query: 343 WIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 I + E+ +A +E +F+SG + +++L L + +LI RDE +H + Sbjct: 140 EIYKHGTPLEKKIASVFLETFLFYSGFYTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTY 198 Query: 402 ACHLYSM----LP-AEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + LP AE+ + +++++ + E E+ + + IG +++ + ++ Sbjct: 199 IGYKFQLGFNELPEAEQETLKDWMYNLLYELYENEERYTEELY--DPIGWTEEVKT-FLR 255 Query: 457 FVADRLLVELGYDRLW----NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDN 512 + A++ L+ LG D L+ N NP + + +FF + Y +V D+ Sbjct: 256 YNANKALMNLGMDPLFPDTANDVNPIVMNGISTGTSNHDFFSQVGNGYLLGHVEAMKDDD 315
ref|ZP_00146109.2| COG0208: Ribonucleotide reductase, beta subunit [Psychrobacter sp. 273-4] (377 aa) Score: 66 bits (161), Expect: 1.83176e-09 Length: 306, Idn/Pos/Gap = 70/123/40 (22%/40%/13%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 KHP + ++ ++ FW EE+D++ D + N + + F+S+ L + D I + Sbjct: 33 KHPIFEQLIEKQLSFFWRPEEVDVSRDRMDYGNLSSHEQHIFISN-LKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAM 327 + V IPE + E IHS +Y+ +I + DP + H+ Sbjct: 92 PNVVLLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIINDPAIVFDDIMQNEHILGRA 151 Query: 328 ETMPCVRRKAYWAI---------------RWIGSDASFQER-----LVAFAAVEGIFFSG 367 + Y++ + I D ++ L+A +E I F Sbjct: 152 ADIAKYYDDLYYSSSLYNLYGAGTHTINGKQITVDLKSLKKQLYLCLMAVNVLEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPA---------E 418 SF F +R LM G +LI+RDE LH H+ +++ P E Sbjct: 212 SFACSFAFAERKLMEGNAKIIKLIARDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYE 271 Query: 419 RIHSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLW--NTP 475 + R A E EKE+ S+IG+N+ ++ YIE++ + + +G + + Sbjct: 272 ESIEIFRKAAEQEKEWAGYLFKDGSMIGLNKDILCQYIEYITNLRMEAVGLPVAFPKSKS 331 Query: 476 NPFDWM 481 NP W+ Sbjct: 332 NPIPWI 337
gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus] ref|YP_003810.1| unknown [Regina ranavirus] (387 aa) Score: 66 bits (161), Expect: 1.86258e-09 Length: 340, Idn/Pos/Gap = 89/129/49 (26%/37%/14%) Query: 200 IFKAEEADRYT----LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR-LTEAER 254 I KA D +T P ++ +H W EI+L D+ W++ +T E+ Sbjct: 58 ITKALAMDMFTTSKCFKPFRYAWAENIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEK 117 Query: 255 YFVSHVLAFFAASD----GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLI 310 FVS VL F D + L++L + F E R E IH + YSLL Sbjct: 118 AFVSCVLRLFTQLDVEVGALYLDHLTQVF----RCNEIRNMLTSFACREAIHQKAYSLLN 173 Query: 311 DAY---------VKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVE 361 D D EE T M M C + L+ E Sbjct: 174 DTLGMPDCEYQAFADYEEMTDKLDFMREMDC------------STLPGLARSLLRAVLNE 221 Query: 362 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER--VPAER 419 G+ +F + ++ G M G+ E RDE +H + L+ L +E V + Sbjct: 222 GVSLFAAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTEDL 281 Query: 420 IHSMIRDA---VECEKEFVCDAL----PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 I DA E E+ FV A PV G+ + + Y+ +V + +G RL Sbjct: 282 IELFKEDAERVAELEEAFVDLAFQECGPVC--GLEPKQVKDYVLYVINLRASNMGLPRLI 339 Query: 473 N-TPN--PFDWME-LISLQGKTNFFEKRVGEYQKANVTTS 508 P P W++ LI TNFFE V EY+ +T S Sbjct: 340 ERAPEACPIPWVKWLIDGADLTNFFENHVTEYETGGLTGS 379
ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9241] gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus G9241] (322 aa) Score: 66 bits (160), Expect: 2.33321e-09 Length: 313, Idn/Pos/Gap = 73/143/25 (23%/45%/7%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR 281 F+K+++A FWT EEI +++D + W +L++ E+ VL D + Sbjct: 17 FWKQNIAQFWTEEEIAVSSDKNTWA-QLSKQEQVAYKRVLGGLTLLDTKQGGEGMPLVLV 75 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA---- 337 +E +A+ F AME +H+++YS + + EE +F ++T P + +KA Sbjct: 76 HLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATE-EEIDEIFDWVDTHPLLEKKAGIIT 134 Query: 338 YWAIRWIGSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS-- 392 + R + + + +E +A A +E F F +L +G LT S E+I+ Sbjct: 135 SYYRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPLYLAGQG---KLTASGEIINLI 191 Query: 393 -RDEGLHCDF----ACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDALPVSLIGM 446 RDE +H F A +++ L AE++ ++ ++ + E E + + + IG+ Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFEKRVGEYQKAN 504 + + + ++ + A++ L+ LG + + NP L + +FF + Y KA Sbjct: 250 VEDV-NRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNHDFFSVKGNGYVKAT 308 Query: 505 VTTSATDNVFALD 517 +D+ F + Sbjct: 309 NVEKLSDDDFVFN 321
ref|YP_082843.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus ZK] gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus ZK] (322 aa) Score: 66 bits (160), Expect: 2.43261e-09 Length: 313, Idn/Pos/Gap = 73/143/25 (23%/45%/7%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR 281 F+K+++A FWT EEI +++D + W +L++ E+ VL D + Sbjct: 17 FWKQNIAQFWTEEEIAVSSDKNTWA-QLSKEEQVAYKRVLGGLTLLDTKQGGEGMPLVLV 75 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA---- 337 +E +A+ F AME +H+++YS + + EE +F ++T P + +KA Sbjct: 76 HLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATE-EEIDEIFDWVDTHPLLEKKAGIIT 134 Query: 338 YWAIRWIGSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS-- 392 + R + + + +E +A A +E F F +L +G LT S E+I+ Sbjct: 135 SYYRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPLYLAGQG---KLTASGEIINLI 191 Query: 393 -RDEGLHCDF----ACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDALPVSLIGM 446 RDE +H F A +++ L AE++ ++ ++ + E E + + + IG+ Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFEKRVGEYQKAN 504 + + + ++ + A++ L+ LG + + NP L + +FF + Y KA Sbjct: 250 VEDV-NRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNHDFFSVKGNGYVKAT 308 Query: 505 VTTSATDNVFALD 517 +D+ F + Sbjct: 309 NVEKLSDDDFVFN 321
emb|CAA51453.1| nrdB [Salmonella typhimurium] ref|YP_217268.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella typhimurium LT2] ref|NP_461220.1| ribonucleoside-diphosphate reductase 1 beta subunit [Salmonella typhimurium LT2] sp|P37427|RIR2_SALTY Ribonucleoside-diphosphate reductase 1 beta chain (Ribonucleotide reductase 1) (B2 protein) (R2 protein) (376 aa) Score: 66 bits (160), Expect: 2.51517e-09 Length: 306, Idn/Pos/Gap = 75/130/48 (24%/42%/15%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 36 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP +F + T ++++A Sbjct: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---AVVFDDIVTNEQIQKRA 151 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ + +E L++ A+E I F Sbjct: 152 EGISAYYDELIEMTSYWHLLGEGTHTVNGKTVVVNLRELKKKLYLCLMSVNALEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML------PAEERVPAE--- 418 SF F +R LM G LI+RDE LH H+ ++L P + E Sbjct: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQ 271 Query: 419 RIHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT-P 475 + + A + EKE+ D L S+IG+N+ ++ Y+E++ + + +G D + T Sbjct: 272 ECYDLFVQAAQQEKEWA-DYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 Query: 476 NPFDWM 481 NP W+ Sbjct: 331 NPIPWI 336
ref|YP_149900.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] (376 aa) Score: 66 bits (160), Expect: 2.53624e-09 Length: 306, Idn/Pos/Gap = 75/130/48 (24%/42%/15%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 36 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP +F + T ++++A Sbjct: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---AVVFDDIVTNEQIQKRA 151 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ + +E L++ A+E I F Sbjct: 152 EGISAYYDELIETTSYWHLLGEGTHTVNGKTVVVNLRELKKKLYLCLMSVNALEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML------PAEERVPAE--- 418 SF F +R LM G LI+RDE LH H+ ++L P + E Sbjct: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQ 271 Query: 419 RIHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT-P 475 + + A + EKE+ D L S+IG+N+ ++ Y+E++ + + +G D + T Sbjct: 272 ECYDLFVQAAQQEKEWA-DYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 Query: 476 NPFDWM 481 NP W+ Sbjct: 331 NPIPWI 336
ref|NP_804443.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi Ty2] ref|NP_456821.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi str. CT18] emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi] gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella enterica subsp. enterica serovar Typhi Ty2] pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) (376 aa) Score: 65 bits (159), Expect: 2.62232e-09 Length: 306, Idn/Pos/Gap = 75/130/48 (24%/42%/15%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 36 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 94 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP +F + T ++++A Sbjct: 95 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---AIVFDDIVTNEQIQKRA 151 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ + +E L++ A+E I F Sbjct: 152 EGISAYYDELIEMTSYWHLLGEGTHTVNGKTVVVNLRELKKKLYLCLMSVNALEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML------PAEERVPAE--- 418 SF F +R LM G LI+RDE LH H+ ++L P + E Sbjct: 212 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQ 271 Query: 419 RIHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT-P 475 + + A + EKE+ D L S+IG+N+ ++ Y+E++ + + +G D + T Sbjct: 272 ECYDLFVQAAQQEKEWA-DYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRS 330 Query: 476 NPFDWM 481 NP W+ Sbjct: 331 NPIPWI 336
ref|YP_017994.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. 'Ames Ancestor'] ref|NP_843830.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. Ames] ref|YP_035577.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus thuringiensis serovar konkukian str. 97-27] ref|YP_027539.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. Sterne] ref|NP_655257.1| ribonuc_red_sm, Ribonucleotide reductase, small chain [Bacillus anthracis str. A2012] gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. Ames] gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. 'Ames Ancestor'] gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus anthracis str. Sterne] (322 aa) Score: 65 bits (159), Expect: 3.36817e-09 Length: 313, Idn/Pos/Gap = 73/143/25 (23%/45%/7%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR 281 F+K+++A FWT EEI +++D + W +L++ E+ VL D + Sbjct: 17 FWKQNIAQFWTEEEIAVSSDKNTWV-QLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLV 75 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA---- 337 +E +A+ F AME +H+++YS + + EE +F ++T P + +KA Sbjct: 76 HLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATE-EEIDEIFDWVDTHPLLEKKAGIIT 134 Query: 338 YWAIRWIGSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS-- 392 + R + + + +E +A A +E F F +L +G LT S E+I+ Sbjct: 135 SYYRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPLYLAGQG---KLTASGEIINLI 191 Query: 393 -RDEGLHCDF----ACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDALPVSLIGM 446 RDE +H F A +++ L AE++ ++ ++ + E E + + + IG+ Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFEKRVGEYQKAN 504 + + + ++ + A++ L+ LG + + NP L + +FF + Y KA Sbjct: 250 VEDV-NRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNHDFFSVKGNGYVKAT 308 Query: 505 VTTSATDNVFALD 517 +D+ F + Sbjct: 309 NVEKLSDDDFVFN 321
pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain (340 aa) Score: 65 bits (158), Expect: 3.63084e-09 Length: 312, Idn/Pos/Gap = 76/130/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 +F F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 AFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 324 PFQTRSNPIPWI 335
ref|NP_798314.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus RIMD 2210633] dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio parahaemolyticus RIMD 2210633] (377 aa) Score: 65 bits (158), Expect: 3.75407e-09 Length: 312, Idn/Pos/Gap = 72/130/57 (23%/41%/18%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 +IFE ++ ++ FW EE+D+++D + N+L + E++ L + D I + Sbjct: 35 EIFEKLIEKQLSFFWRPEEVDVSSDRIDY-NKLPDHEKHIFISNLKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAMET 329 + V +PE + E IHS +Y+ +I V DP E H+ + + Sbjct: 94 VALLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEHILKRAKD 153 Query: 330 MPCVRRKAYWAIRWIGSDASFQER--------------------------LVAFAAVEGI 363 + A++ I + + L++ A+E I Sbjct: 154 I------AHYYDDLIQTTNDYHRYGEGEHVLNGETVKVSLYDLKKKLYICLMSVNALEAI 207 Query: 364 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLP-----------AE 412 F SF F +R LM G +LI+RDE LH + H+ ++L AE Sbjct: 208 RFYVSFACSFAFAERELMEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAE 267 Query: 413 ERVPAERIHSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRL 471 E + + ++A E EKE+ S+IG+N+ ++S Y+E++ + + +G Sbjct: 268 E--AKQDCFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAA 325 Query: 472 W--NTPNPFDWM 481 + T NP W+ Sbjct: 326 YPEATTNPIPWI 337
pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide Reductase R2 Protein From E. Coli pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide Reductase R2 Protein From E. Coli (375 aa) Score: 65 bits (157), Expect: 4.58637e-09 Length: 312, Idn/Pos/Gap = 76/130/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +++ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSHTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 324 PFQTRSNPIPWI 335
pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia Coli pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia Coli (340 aa) Score: 65 bits (157), Expect: 4.86222e-09 Length: 312, Idn/Pos/Gap = 76/130/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +++ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 324 PFQTRSNPIPWI 335
ref|NP_569593.1| putative ribonucleoside-diphosphate reductase beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] emb|CAD09988.1| putative ribonucleoside-diphosphate reductase beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] (380 aa) Score: 65 bits (157), Expect: 5.6975e-09 Length: 302, Idn/Pos/Gap = 71/122/48 (23%/40%/15%) Query: 224 KRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDV 283 ++ ++ FW EE+D+ D + +L E ER+ L + D + + + + Sbjct: 42 EKQLSFFWRPEEVDITTDRIDFNTKLQEHERHIFLSNLRYQTLLDSVQGRSPNATLLPLI 101 Query: 284 EIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--------ERTHLFRAMET------ 329 IPE + E IHS +Y+ +I V DP + + RA+ Sbjct: 102 SIPELETWVETWSFSETIHSRSYTHIIRGMVDDPSIVFDGIVTDEEIISRAVSISSEYDR 161 Query: 330 ---MPCVRR-------KAYWAIRWIGSDASFQERL----VAFAAVEGIFFSGSFCAIFWL 375 M C R+ + + + G Q +L V+ A+E I F SF F Sbjct: 162 LYEMTCARQHLGEDEFERLYISEFDGKPYPLQRQLFRTLVSVNALEAIRFYVSFACTFAF 221 Query: 376 KKRGLMPGLTFSNELISRDEGLHCDFACH------------LYSMLPAEERVPAERIHSM 423 +R L+ G T I+RDE LHC+ ++ M+ AEE I+ Sbjct: 222 GERKLLEGNTKIMRFIARDEALHCEGTERMIRFMRTGREGLMWKMIAAEEE---SFIYQT 278 Query: 424 IRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNPFD 479 + D E + D L S+IG+N ++ +Y+++ + + LG +L+ +P Sbjct: 279 MMDVAGQEMRWA-DYLFKDGSMIGLNADILKSYVKYRTNLAMRRLGLRQLFPEIKDDPLV 337 Query: 480 WM 481 WM Sbjct: 338 WM 339
gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis MC58] pir||G81100 ribonucleoside-diphosphate reductase, beta chain NMB1288 [imported] - Neisseria meningitidis (strain MC58 serogroup B) ref|NP_274308.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria meningitidis MC58] (384 aa) Score: 64 bits (156), Expect: 5.89086e-09 Length: 304, Idn/Pos/Gap = 71/123/41 (23%/40%/13%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 ++FE ++ ++ FW EEID++ D + N L E E++ L + D I + Sbjct: 42 EVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN-LPEHEKHIFISNLKYQTLLDSIQGRSPN 100 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAMET 329 + V IPE + E IHS +Y+ +I V DP E ++ E Sbjct: 101 VALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAED 160 Query: 330 MPC-----VRRKAYW---------------AIRWIGSDASFQERLVAFAAVEGIFFSGSF 369 + C + Y+ + G L+ +E I F SF Sbjct: 161 IACYYDDLIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSF 220 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPA------EERVPAE---RI 420 F +R LM G +LI+RDE LH H+ +++ + + AE Sbjct: 221 ACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDEC 280 Query: 421 HSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNP 477 + + A E EKE+ S+IG+N++++S Y+E++ + + +G + NP Sbjct: 281 FQLFKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNP 340 Query: 478 FDWM 481 W+ Sbjct: 341 IPWI 344
ref|NP_930285.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide reductase 1) (B2 protein) (R2 protein) [Photorhabdus luminescens subsp. laumondii TTO1] emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide reductase 1) (B2 protein) (R2 protein) [Photorhabdus luminescens subsp. laumondii TTO1] (376 aa) Score: 64 bits (156), Expect: 5.94022e-09 Length: 308, Idn/Pos/Gap = 72/128/45 (23%/41%/14%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 K+P + ++ ++ FW EE+D++ D + N L + E++ L + D I + Sbjct: 33 KYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY-NALPDHEKHIFISNLKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE---------------- 318 F+ + IPE + E IHS +Y+ +I V DP Sbjct: 92 PNVAFLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEEILKRA 151 Query: 319 -----------ERTHLFRAME--TMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFF 365 E T+ ++ T + ++R G L++ A+E I F Sbjct: 152 KDISAYYDDLIEMTNHYQLFGEGTHQIAGKTITASLR--GLKKQLYLCLMSVNALEAIRF 209 Query: 366 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP--------- 416 SF F +R LM G +LI+RDE LH H+ ++L + + P Sbjct: 210 YVSFACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAKEC 269 Query: 417 AERIHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT 474 ++ + + A E EKE+ D L S+IG+N+ ++ Y+E++ + + +G + T Sbjct: 270 EQQCYDLFVQAAEQEKEWA-DYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFET 328 Query: 475 -PNPFDWM 481 NP W+ Sbjct: 329 RSNPIPWI 336
ref|YP_204584.1| ribonucleoside-diphosphate reductase beta chain [Vibrio fischeri ES114] gb|AAW85696.1| ribonucleoside-diphosphate reductase beta chain [Vibrio fischeri ES114] (377 aa) Score: 64 bits (156), Expect: 5.98999e-09 Length: 304, Idn/Pos/Gap = 70/126/41 (23%/41%/13%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 +IFE ++ ++ FW EE+D++ D + N L E E++ L + D I + Sbjct: 35 QIFEKLIEKQLSFFWRPEEVDVSGDRIDYNN-LPEHEQHIFISNLKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE-RTHLFRAMETMPCVRR 335 + V IPE + E IHS +Y+ +I V +P + E + + Sbjct: 94 VALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNNPSVIFDDIVENEEILKRAKD 153 Query: 336 KAYWAIRWI-----------------GSDASFQER---------LVAFAAVEGIFFSGSF 369 A++ I G + + +R L++ A+E I F SF Sbjct: 154 IAHYYDNLIQATNDYHRFGEGTHVLNGQEITISKRELKKKLYLCLMSVNALEAIRFYVSF 213 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP---------AERI 420 F +R LM G +LI+RDE LH H+ ++L + P + Sbjct: 214 ACSFAFAERELMEGNAKIIKLIARDESLHLTSTQHMLNLLRTGQDDPEFVEIAAECEQEC 273 Query: 421 HSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNP 477 + + A E EK++ S+IG+N+ ++ Y+E++ + + +G + + T NP Sbjct: 274 FDLFKAAAEQEKQWANYLFKDGSMIGLNKDILCQYVEYITNLRMKAVGLNSAYEGATQNP 333 Query: 478 FDWM 481 W+ Sbjct: 334 IPWI 337
ref|NP_240009.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] sp|P57275|RIR2_BUCAI Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported] - Buchnera sp. (strain APS) (376 aa) Score: 64 bits (156), Expect: 5.98999e-09 Length: 341, Idn/Pos/Gap = 79/144/48 (23%/42%/14%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 KIFE ++ ++ FW EEIDL+ D ++N + F+S+ L + D I + Sbjct: 35 KIFEQLIEKQLSFFWRPEEIDLSRDRIDFQNLPDNEKHIFISN-LKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAMET 329 F+ + IPE + E IHS +Y+ +I V P +++ + Sbjct: 94 IAFLPIISIPELETWIETWSFSETIHSRSYTHIIRNIVNCPSLVFDDIISNKNIYDRAQN 153 Query: 330 MPC-----VRRKAYWAI----------RWIGSDASFQER-----LVAFAAVEGIFFSGSF 369 + + +YW + + I + F ++ L++ +E I F SF Sbjct: 154 ISIYYDELINLTSYWHLLGEGIHLINGKKIHINLRFLKKRLYLCLISVNVLEAIRFYVSF 213 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLP-------AEERV---PAER 419 F +R LM G LI+RDE LH H+ ++L E+ V E Sbjct: 214 ACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEA 273 Query: 420 IHSMIRDAVECEKEFVCDALPV-SLIGMNQQLMSAYIEFVADRLLVELGYD---RLWNTP 475 I+ I A + EK++ S++G+N+ ++ YIE++ + + +G+ + + P Sbjct: 274 INIFI-SAAQQEKKWASYLFKSGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNP 332 Query: 476 NPF--DWMELISLQGKTNFFEKRVGEYQKANVTTSATDNVF 514 P+ DW+ ++Q E + Y + + +DN F Sbjct: 333 IPWINDWLTSDNIQIAPQ--ETEISSYLVGQIDSEVSDNEF 371
emb|CAB84731.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis Z2491] ref|NP_284220.1| ribonucleoside diphosphate reductase I beta chain [Neisseria meningitidis Z2491] pir||D81841 ribonucleoside-diphosphate reductase (EC 1.17.4.1) I beta chain NMA1498 [imported] - Neisseria meningitidis (strain Z2491 serogroup A) (377 aa) Score: 64 bits (156), Expect: 6.09079e-09 Length: 304, Idn/Pos/Gap = 71/123/41 (23%/40%/13%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 ++FE ++ ++ FW EEID++ D + N L E E++ L + D I + Sbjct: 35 EVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN-LPEHEKHIFISNLKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAMET 329 + V IPE + E IHS +Y+ +I V DP E ++ E Sbjct: 94 VALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAED 153 Query: 330 MPC-----VRRKAYW---------------AIRWIGSDASFQERLVAFAAVEGIFFSGSF 369 + C + Y+ + G L+ +E I F SF Sbjct: 154 IACYYDDLIEYTQYYNLLGEGVHNVGGKPITVSLRGLKKKLYLCLMCVNVLEAIRFYVSF 213 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPA------EERVPAE---RI 420 F +R LM G +LI+RDE LH H+ +++ + + AE Sbjct: 214 ACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDEC 273 Query: 421 HSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNP 477 + + A E EKE+ S+IG+N++++S Y+E++ + + +G + NP Sbjct: 274 FQLFKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNP 333 Query: 478 FDWM 481 W+ Sbjct: 334 IPWI 337
ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Bacteriophage T5] gb|AAU05231.1| ribonucleotide reductase beta subunit [Bacteriophage T5] gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Bacteriophage T5] gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small subunit [Bacteriophage T5] (381 aa) Score: 64 bits (156), Expect: 7.13711e-09 Length: 356, Idn/Pos/Gap = 83/144/57 (23%/40%/16%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 + HP++ + FWT EI L AD W N E + + + LA+ +D + Sbjct: 30 VAHPELERLALLARSQFWTETEISLEADKKQWPNLPREIQEITLLN-LAWQTQTDSFISR 88 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE--------RTHLFR 325 M V PE E++HS YS +I + DP E + R Sbjct: 89 APEAAIMPLVSRPELEGMLKQWSYFEDLHSRAYSNIIRNVLTDPAEFIDSVTKNQEAFAR 148 Query: 326 AMETMPCVRR-----KAYWAIRWIGSDASFQER-------------LVAFAAV---EGIF 364 +++ + + A+R D ++ E L A+ A+ E + Sbjct: 149 IADSVELFDELYQLGQYFIAVRDHRGDNTYPETEFPEVKRETQAKLLDAYFAIYGLEAMQ 208 Query: 365 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSML----------PAEER 414 F SF F L + ++ G+ + +LI++DE LH + + ++ A + Sbjct: 209 FYASFACTFALAENDILQGIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVDEAVAK 268 Query: 415 VPAERIHSMIRDAVECE-KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN 473 PA+ + ++ E E F+ SLIG+N +L+ Y+ FV + +G + + Sbjct: 269 APAQLLKTL---KTEIEWGHFIFKGR--SLIGLNAELLEEYLYFVGRNAFMHIGVEWPSH 323 Query: 474 TP----NP----FDWMELISLQGKTNFFEKRVG-EYQKANVTTSATDNVFALDIEF 520 P NP +W++ SLQ E ++G Y+ VT ++TD + L EF Sbjct: 324 LPVITKNPIPWIMNWLDTTSLQPAPQ--EIQIGAAYRVGQVTETSTDTLKDLGNEF 377
ref|ZP_00144797.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gb|EAA23602.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] (245 aa) Score: 64 bits (155), Expect: 7.88871e-09 Length: 206, Idn/Pos/Gap = 52/91/11 (25%/44%/5%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH 259 I K + + L +++ + Y+ +A+FW E++DL D + + N LT ER Sbjct: 24 IIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKNDYEN-LTVPEREAYDG 82 Query: 260 VLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE 319 +L+F D I N+ V PE Q E IHS++Y +I++ + P++ Sbjct: 83 ILSFLIFLDSIQTNNIPN-ISDHVTAPEVNLLLAIQTFQEAIHSQSYQYIIESIL--PKQ 139 Query: 320 RTHLF--RAMETMPCVRRKAYWAIRWIG-----SDASFQERLVAFAAVEGIFFSGSFCAI 372 L + + R ++ A + SD +F + ++A +E ++F F Sbjct: 140 SRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVIIANYLLESLYFYNGFNFF 199 Query: 373 FWLKKRGLMPGLTFSNELISRDEGLH 398 + L R M G + LI+RDE H Sbjct: 200 YLLASRNKMVGTSDIIRLINRDELSH 225
ref|NP_831136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 14579] gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus ATCC 14579] (322 aa) Score: 64 bits (155), Expect: 8.64702e-09 Length: 313, Idn/Pos/Gap = 73/141/25 (23%/45%/7%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR 281 F+K+++A FWT EEI +++D + W +L++ E+ VL D + Sbjct: 17 FWKQNIAQFWTEEEIAVSSDKNTWV-QLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLV 75 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA---- 337 +E +A+ F AME +H+++YS + + EE +F ++ P + +KA Sbjct: 76 HLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATE-EEIDDIFDWVDNHPLLEKKAGIIT 134 Query: 338 YWAIRWIGSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS-- 392 + R + + + +E +A A +E F F +L +G LT S E+I+ Sbjct: 135 SYYRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPLYLAGQG---KLTASGEIINLI 191 Query: 393 -RDEGLHCDF----ACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDALPVSLIGM 446 RDE +H F A +++ L AEE+ ++ ++ + E E + + + IG+ Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFEKRVGEYQKAN 504 + + + ++ + A++ L+ LG + + NP L + +FF + Y KA Sbjct: 250 VEDV-NRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNHDFFSVKGNGYVKAT 308 Query: 505 VTTSATDNVFALD 517 D+ F + Sbjct: 309 NVEKLADDDFVFN 321
pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS Ions At Ph 5 pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS Ions At Ph 5 pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH Ferrous Ions At Neutral Ph pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH Ferrous Ions At Neutral Ph (375 aa) Score: 64 bits (155), Expect: 9.39946e-09 Length: 312, Idn/Pos/Gap = 76/131/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ F+ EE+D++ D ++ L E E++ L + + I + Sbjct: 35 IFEKLIEKQLSFFFRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLESIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +Y+ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 +NT NP W+ Sbjct: 324 PFNTRSNPIPWI 335
ref|YP_093920.1| putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis] ref|NP_995489.1| putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis biovar Medievalis str. 91001] gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis biovar Medievalis str. 91001] emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit [Yersinia pestis] (380 aa) Score: 63 bits (154), Expect: 1.00483e-08 Length: 302, Idn/Pos/Gap = 71/121/48 (23%/40%/15%) Query: 224 KRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRDV 283 ++ ++ FW EE+D+ D + +L E ER+ L + D + + + + Sbjct: 42 EKQLSFFWRPEEVDITTDRIDFNTKLQEHERHIFLSNLRYQTLLDSVQGRSPNATLLPLI 101 Query: 284 EIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--------ERTHLFRAMET------ 329 IPE + E IHS +Y+ +I V DP + + RA+ Sbjct: 102 SIPELETWVETWSFSETIHSRSYTHIIRGMVDDPSIVFDGIVTDEEIISRAVSISSEYDR 161 Query: 330 ---MPCVRR-------KAYWAIRWIGSDASFQERL----VAFAAVEGIFFSGSFCAIFWL 375 M C R+ + + + G Q +L V+ A+E I F SF F Sbjct: 162 LYEMTCARQHLGEDEFERLYVSEFDGKPYPLQRQLFRTLVSVNALEAIRFYVSFACTFAF 221 Query: 376 KKRGLMPGLTFSNELISRDEGLHCDFACH------------LYSMLPAEERVPAERIHSM 423 +R L+ G T I+RDE LHC+ ++ M+ AEE I+ Sbjct: 222 GERKLLEGNTKIMRFIARDEALHCEGTERMIRFMRTGREGLMWKMIAAEEE---SFIYQT 278 Query: 424 IRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN--TPNPFD 479 + D E + D L S+IG+N ++ +Y+++ + + LG L+ +P Sbjct: 279 MMDVAGQEMRWA-DYLFKDGSMIGLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLV 337 Query: 480 WM 481 WM Sbjct: 338 WM 339
emb|CAF34216.1| ribonucleotide reductase B subunit [Bacteriophage S-PM2] ref|YP_195186.1| ribonucleotide reductase B subunit [Bacteriophage S-PM2] (394 aa) Score: 63 bits (154), Expect: 1.01325e-08 Length: 317, Idn/Pos/Gap = 76/122/47 (23%/38%/14%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 RY F K+P + ++ + FW EE+ L D ++ E + F S+ L + Sbjct: 44 RYDNF--KYPVFDKLTQQQLGYFWRPEEVSLQKDRADYQQLRPEQKHIFTSN-LKYQIML 100 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEE-------- 319 D + FM +PE ME +HS +Y+ +I DP + Sbjct: 101 DSVQGRGPGMAFMPYCSLPELESAMNIWQTMEMVHSRSYTHIIKNIYPDPSDVFDQIISD 160 Query: 320 RTHLFRAMETMPCVRRKAYWAIRWIGSDASFQE--------------------RLVAFAA 359 L RA A W G+ S++ R VA Sbjct: 161 EKILERATSVTKAYDEFLQAAQEW-GAGNSWEHALEEVDSAKWELKELKRKLYRAVANVY 219 Query: 360 V-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE----- 413 + EGI F SF F + LM G LI+RDE H ++ + A + Sbjct: 220 ILEGIRFYVSFACSFAFGENKLMEGNAKIISLIARDESQHMTITQNIINKWKAGDDPDMV 279 Query: 414 ---RVPAERIHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGY 468 + ++ M + VE E+ D L S+IG+N +L+ Y+E+ A+R + +G Sbjct: 280 EIAKQEENNVYDMFKKCVE-EEIIWADYLFRDGSMIGLNAKLLQKYVEWTANRRMKAIGM 338 Query: 469 DRLWNTP---NPFDWME 482 ++++ P NP W E Sbjct: 339 KQIFDVPLSNNPLPWTE 355
ref|NP_977792.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus ATCC 10987] gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus ATCC 10987] (322 aa) Score: 63 bits (154), Expect: 1.02174e-08 Length: 313, Idn/Pos/Gap = 72/142/25 (23%/45%/7%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR 281 F+K+++A FWT EEI +++D + W +L++ E+ VL D + Sbjct: 17 FWKQNIAQFWTEEEIAVSSDKNTWV-QLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLV 75 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA---- 337 +E +A+ F AME +H+++YS + + EE +F ++ P + +KA Sbjct: 76 HLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATE-EEIDDIFEWVDNHPLLEKKAGIIT 134 Query: 338 YWAIRWIGSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS-- 392 + R + + + +E +A A +E F F +L +G LT S E+I+ Sbjct: 135 SYYRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPLYLAGQG---KLTASGEIINLI 191 Query: 393 -RDEGLHCDF----ACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDALPVSLIGM 446 RDE +H F A +++ L AE++ ++ ++ + E E + + + IG+ Sbjct: 192 IRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 249 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFEKRVGEYQKAN 504 + + + ++ + A++ L+ LG + + NP L + +FF + Y KA Sbjct: 250 VEDV-NRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNHDFFSVKGNGYVKAT 308 Query: 505 VTTSATDNVFALD 517 +D+ F + Sbjct: 309 NVEKLSDDDFVFN 321
gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506] (387 aa) Score: 63 bits (154), Expect: 1.05641e-08 Length: 340, Idn/Pos/Gap = 87/129/49 (25%/37%/14%) Query: 200 IFKAEEADRYT----LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR-LTEAER 254 I KA D +T P ++ + +H W EI+L D+ W++ +T E+ Sbjct: 58 ITKALAMDMFTTSKCFKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEK 117 Query: 255 YFVSHVLAFFAASD----GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLI 310 FVS VL F D + L++L + F E R E IH + YSLL Sbjct: 118 AFVSCVLRLFTQLDVEVGALYLDHLTQVF----RCNEIRNMLTSFACREAIHQKAYSLLN 173 Query: 311 DAY---------VKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVE 361 D D E T M M C + L+ E Sbjct: 174 DTLGMPDCEYQAFADYGEMTDKLDFMREMDC------------STLPGLARSLLRAVLNE 221 Query: 362 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER--VPAER 419 G+ +F + ++ G M G+ E RDE +H + L+ L +E V + Sbjct: 222 GVSLFAAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDL 281 Query: 420 IHSMIRDA---VECEKEFVCDAL----PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 I DA E E+ FV A PV G+ + + Y+ +V + +G +L Sbjct: 282 IELFKEDAERVAELEEAFVDLAFQECGPVC--GLEPKQVKDYVLYVINLRAANMGLPKLI 339 Query: 473 N-TPN--PFDWME-LISLQGKTNFFEKRVGEYQKANVTTS 508 P P W++ LI TNFFE V EY+ +T S Sbjct: 340 ERAPEACPIPWVKWLIDGADLTNFFENHVTEYETGGLTGS 379
ref|NP_718006.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella oneidensis MR-1] gb|AAN55450.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella oneidensis MR-1] (376 aa) Score: 63 bits (154), Expect: 1.19726e-08 Length: 307, Idn/Pos/Gap = 68/125/46 (22%/40%/14%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 ++FE ++ ++ FW EE+D++ D + N L + E++ L + D I + Sbjct: 35 EVFEKLIEKQLSFFWRPEEVDVSRDKIDY-NSLPDHEKHIFISNLKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDP------------------- 317 F+ V +PE + E IHS +Y+ +I V DP Sbjct: 94 VAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNHEILRRATD 153 Query: 318 --EERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQER---------LVAFAAVEGIFFS 366 E HL + + + + G R +++ A+E I F Sbjct: 154 IAEFYDHLIKLTQIYHLLGEGTHVID---GEPVEVNTRTLKKALYLCMMSVNALEAIRFY 210 Query: 367 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP---------A 417 SF F +R LM G LI+RDE LH + H+ +++ + P Sbjct: 211 VSFACSFAFAERKLMEGNAKIIRLIARDEALHLNSTQHILTIMQGGKDDPEMGEIAIECQ 270 Query: 418 ERIHSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTP 475 + +++ A E EKE+ S+IG+N+Q++ Y+E++ ++ + + + + Sbjct: 271 QEAYNLFLKAAEQEKEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQT 330 Query: 476 NPFDWME 482 NP WM+ Sbjct: 331 NPLPWMK 337
ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein [Frog virus 3] gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein [Frog virus 3] (387 aa) Score: 63 bits (153), Expect: 1.40294e-08 Length: 340, Idn/Pos/Gap = 87/129/49 (25%/37%/14%) Query: 200 IFKAEEADRYT----LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR-LTEAER 254 I KA D +T P ++ + +H W EI+L D+ W++ +T E+ Sbjct: 58 ITKALAMDMFTTSKCFKPFRYNWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEK 117 Query: 255 YFVSHVLAFFAASD----GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLI 310 FVS VL F D + L++L + F E R E IH + YSLL Sbjct: 118 AFVSCVLRLFTQLDVEVGALYLDHLTQVF----RCNEIRNMLTSFACREAIHQKAYSLLN 173 Query: 311 DAY---------VKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVE 361 D D E T M M C + L+ E Sbjct: 174 DTLGMPDCEYQAFADYGEMTDKLDFMREMDC------------STLPGLARSLLRAVLNE 221 Query: 362 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER--VPAER 419 G+ +F + ++ G M G+ E RDE +H + L+ L +E V + Sbjct: 222 GVSLFAAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDL 281 Query: 420 IHSMIRDA---VECEKEFVCDAL----PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 I DA E E+ FV A PV G+ + + Y+ +V + +G +L Sbjct: 282 IELFKEDAERVAELEEAFVDLAFQECGPVC--GLEPKQVKDYVLYVINLRAANMGLPKLI 339 Query: 473 N-TPN--PFDWME-LISLQGKTNFFEKRVGEYQKANVTTS 508 P P W++ LI TNFFE V EY+ +T S Sbjct: 340 ERAPEACPIPWVKWLIDGADLTNFFENHVTEYETGGLTGS 379
gb|AAO11366.1| Ribonucleotide reductase, beta subunit [Vibrio vulnificus CMCP6] ref|NP_761839.1| Ribonucleotide reductase, beta subunit [Vibrio vulnificus CMCP6] ref|NP_934036.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016] dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016] (377 aa) Score: 63 bits (153), Expect: 1.42654e-08 Length: 311, Idn/Pos/Gap = 73/130/55 (23%/41%/17%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 +IFE ++ ++ FW EE+D+++D + N+L + E++ L + D I + Sbjct: 35 EIFEKLIEKQLSFFWRPEEVDVSSDRIDY-NKLPDHEKHIFISNLKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAMET 329 + V +PE + E IHS +Y+ +I V DP E H+ + + Sbjct: 94 VALLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEHILKRAKD 153 Query: 330 MPCVRRKAYW--AIRWIGSDASFQER-----------------------LVAFAAVEGIF 364 + Y+ I+ F E L++ A+E I Sbjct: 154 I-----AHYYDDLIQLTNDYHRFGEGEHVVNGETIKVSLYELKKKLYLCLMSVNALEAIR 208 Query: 365 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLP-----------AEE 413 F SF F +R LM G +LI+RDE LH + H+ ++L AEE Sbjct: 209 FYVSFACSFAFAERELMEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEE 268 Query: 414 RVPAERIHSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 ++ + ++A E EKE+ S+IG+N+ ++ Y+E++ + + +G + Sbjct: 269 --AKQQCFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLPVAY 326 Query: 473 --NTPNPFDWM 481 T NP W+ Sbjct: 327 PNATSNPIPWI 337
pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of Ribonucleotide Reductase pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of Ribonucleotide Reductase pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant E238a (375 aa) Score: 63 bits (152), Expect: 1.72834e-08 Length: 312, Idn/Pos/Gap = 75/129/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +++ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I F Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RD LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 324 PFQTRSNPIPWI 335
ref|ZP_00153688.2| COG0208: Ribonucleotide reductase, beta subunit [Rickettsia rickettsii] (254 aa) Score: 63 bits (152), Expect: 1.80197e-08 Length: 228, Idn/Pos/Gap = 67/96/17 (29%/42%/7%) Query: 298 MENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDAS--FQERLV 355 ME +H YS L+D V PE F + M + Y ++ G DA L Sbjct: 23 METVHIAAYSHLLDT-VGMPEVEYSAFLKYKEM----KDKYDYMQQFGVDAKEDIATTLA 77 Query: 356 AFAA-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE- 413 F A EG+ SF + + M G+ RDE LH + L+ E Sbjct: 78 VFGAFTEGLQLFASFAIMLNFPRFNKMKGMGQIIAWSVRDETLHTNSIITLFKTFVRENP 137 Query: 414 ----RVPAERIHSMIRDAVECEKEFVCDALPVSLI-GMNQQLMSAYIEFVADRLLVELGY 468 +RI+ V E F+ A V I G+ + YI ++ADR L++LG Sbjct: 138 EVWTETLRKRIYEACTTIVHFEDAFIELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGL 197 Query: 469 DRLW-NTPNPFDWM-ELISLQGKTNFFEKRVGEYQKANVTTSATDNVF 514 ++ NP W+ E+++ TNFFE R EY KA TT + + VF Sbjct: 198 KDVYLVNHNPLPWLDEMLNGVEHTNFFENRTTEYSKA-ATTGSWEEVF 244
emb|CAH76799.1| ribonucleotide reductase small subunit, putative [Plasmodium chabaudi] (211 aa) Score: 63 bits (152), Expect: 2.05933e-08 Length: 178, Idn/Pos/Gap = 42/80/6 (23%/44%/3%) Query: 333 VRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 392 V +K W ++ F +L+ + +F G + K+ G++P LT + I Sbjct: 31 VFKKQNWLYNEFEANIPFYNKLILLYISKVLFNGGLSIVSSYCKENGILPCLTSVYDKIQ 90 Query: 393 RDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMS 452 RDE L DF+ + L ++ E + + AV+ E F + L + + + + Sbjct: 91 RDEYLQGDFSVMCCNHL--NNKLKYENVLDYFKTAVDLEYNFCVEMLDFDSLKITKDQVK 148 Query: 453 AYIEFVADRLLVELGYDRLWNTPNPFDWME----LISLQGKTNFFEKRVGEYQKANVT 506 +++++AD +LV L Y + +N+ PF W E ++S K + +K Y +T Sbjct: 149 QFLQYLADTMLVNLKYSKHYNSKYPFTWKEFSKIIVSENAKNDSVKKSADLYGAKQIT 206
gb|AAX92321.1| ORF025 [Staphylococcus phage Twort] (349 aa) Score: 62 bits (150), Expect: 3.12541e-08 Length: 326, Idn/Pos/Gap = 79/140/50 (24%/42%/15%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASD------GIVLENL 275 F++ SFW E+ D++ D+ W N+LT+ E+ VLA D G+ L Sbjct: 33 FWELATTSFWLPEDFDISRDVSSW-NKLTDIEKDTYKKVLAGLTGLDTKQSVEGMSLIAH 91 Query: 276 AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRR 335 E R ++ A FY E+IH+++YS + + + E L +E P +++ Sbjct: 92 HEPRTRFAQVYTAFDFY------ESIHAKSYSHIFTTLLLNKETNYLLNEWVEQEPHLKK 145 Query: 336 KAYWAIRWIGSDASFQERL--------------VAFAAVEGIFFSGSFCAIFWLKKRGLM 381 KA ++IG F E+L VA A +E F F L +G+M Sbjct: 146 KA----QYIG---YFYEKLEQPNPSTFDRYMAKVASAFLESALFYSGFYYPLLLSGQGVM 198 Query: 382 PGLTFSNELISRDEGLH---CDFACHL-YSMLPAEERVPAERIHSMIRDAVECEKEFVCD 437 + I++DE H + L Y L EE+ A+ + + + + E E Sbjct: 199 VQSGTTIYKITQDEAYHGVGVGYTAQLDYQELTEEEQSKADALMYELLEVLY-ENEVSYS 257 Query: 438 ALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQ------GKTN 491 + +G+ + ++ Y+++ +R L LG+D +N P PF+ +++ Q + Sbjct: 258 HMLYDKLGLTEDVIR-YVQYNFNRALANLGFDDYFN-PEPFN--PIVNNQTNVDKLSNAD 313 Query: 492 FFEKRVGEYQKANVTTSATDNVFALD 517 FF + +Y+++ T D F D Sbjct: 314 FFSTK-NDYKRSMNTKDLKDEDFKFD 338
pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of Ribonucleotide Reductase pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of Ribonucleotide Reductase (375 aa) Score: 62 bits (150), Expect: 3.45455e-08 Length: 312, Idn/Pos/Gap = 75/129/60 (24%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +++ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRAYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RDE LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 324 PFQTRSNPIPWI 335
ref|YP_176604.1| ribonucleoside-diphosphate reductase beta chain [Bacillus clausii KSM-K16] dbj|BAD65643.1| ribonucleoside-diphosphate reductase beta chain [Bacillus clausii KSM-K16] (334 aa) Score: 61 bits (148), Expect: 4.94548e-08 Length: 320, Idn/Pos/Gap = 82/139/30 (25%/43%/9%) Query: 215 KHPKIFE--FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 KH F FY ++V FW EE+ L D+ W+ LT AE+ VLA D Sbjct: 12 KHEDDFTQMFYNQNVKQFWLPEEVALNGDLLTWK-YLTPAEKDTYMKVLAGLTLLDTEQG 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMEN-IHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 V+ + + F MEN +H+++YS + + EE LF ++ P Sbjct: 71 NTGMPLVAEHVQGHQRKAVLNFMAMMENAVHAKSYSNIF-MTLATSEEINDLFEWVKVNP 129 Query: 332 CVRRKA------YWAIRWIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGL 384 +++KA Y I+ G D S + LVA +E +F+SG + +++ + LM Sbjct: 130 RLQKKANTIVSIYKDIKR-GDDISLFKALVASVYLESFLFYSGFYYPLYFYGQGKLMQSG 188 Query: 385 TFSNELISRDEGLHCDFACHLYSMLPAEE---RVPAERIHSMIRDAVECEKEFVCDALPV 441 N LI RDE +H +Y L A+E + + + + A+E E + L Sbjct: 189 EIIN-LILRDEAIH-----GVYIGLLAQEIYNKQSPDTQKELHQFAIELLDELYKNELLY 242 Query: 442 S-----LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFE 494 + +G++ + +I + A++ L+ LG+D + NP L + +FF Sbjct: 243 TEDLYDQVGLSHDV-KKFIRYNANKALMNLGFDPYFEDEDINPIVLNGLNTKTKSHDFFS 301 Query: 495 KRVGEYQKANVTTSATDNVF 514 + Y+KA V ++ F Sbjct: 302 MKGNGYKKATVEPLRDEDFF 321
ref|NP_358660.1| Nonessential ribonucleoside-diP reductase 2, subunit beta, class I, function unknown [Streptococcus pneumoniae R6] gb|AAK99870.1| Nonessential ribonucleoside-diP reductase 2, subunit beta, class I, function unknown [Streptococcus pneumoniae R6] pir||B99005 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain nrdF [imported] - Streptococcus pneumoniae (strain R6) (320 aa) Score: 61 bits (147), Expect: 7.25932e-08 Length: 256, Idn/Pos/Gap = 59/120/13 (23%/46%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +L+ E+ V V D + E + D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWR-KLSNKEKDLVGKVFGGLTLLDTMQSETGVQALRAD 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 + P + ME++H+++YS + + E +F T P +++KA + Sbjct: 81 IRTPHEEAVFNNIQFMESVHAKSYSSIFST-LNTKAEIEEIFEWTNTNPYLQKKAE-IVN 138 Query: 343 WIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 I + S E+ VA +E +F+SG F +++L L + +LI RDE +H + Sbjct: 139 EIYLNGSPLEKKVASVFLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTY 197 Query: 402 ACHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + LP EE+ E ++ ++ E E+ + ++L +G +++ + ++ Sbjct: 198 IGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYT-ESL-YDGVGWTEEVKT-FLR 254 Query: 457 FVADRLLVELGYDRLW 472 + A++ L+ +G D L+ Sbjct: 255 YNANKALMNMGQDPLF 270
ref|NP_345649.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus pneumoniae TIGR4] gb|AAK75289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus pneumoniae TIGR4] pir||H95136 hypothetical protein SP1180 [imported] - Streptococcus pneumoniae (strain TIGR4) (320 aa) Score: 60 bits (146), Expect: 8.4357e-08 Length: 256, Idn/Pos/Gap = 59/120/13 (23%/46%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +L+ E+ V V D + E + D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWR-KLSNKEKDLVGKVFGGLTLLDTMQSETGVQALRAD 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 + P + ME++H+++YS + + E +F T P +++KA + Sbjct: 81 IRTPHEEAVFNNIQFMESVHAKSYSSIFST-LNTKAEIEEIFEWTNTNPYLQKKAE-IVN 138 Query: 343 WIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 I + S E+ VA +E +F+SG F +++L L + +LI RDE +H + Sbjct: 139 EIYLNGSPLEKKVASVFLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTY 197 Query: 402 ACHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + LP EE+ E ++ ++ E E+ + ++L +G +++ + ++ Sbjct: 198 IGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYT-ESL-YDGVGWTEEVKT-FLR 254 Query: 457 FVADRLLVELGYDRLW 472 + A++ L+ +G D L+ Sbjct: 255 YNANKALMNMGQDPLF 270
ref|YP_130644.1| putative ribonucleoside-diphosphate reductase, beta subunit [Photobacterium profundum SS9] emb|CAG20842.1| putative ribonucleoside-diphosphate reductase, beta subunit [Photobacterium profundum SS9] (377 aa) Score: 60 bits (146), Expect: 9.5604e-08 Length: 309, Idn/Pos/Gap = 71/127/51 (22%/41%/16%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 +IFE ++ ++ FW EE+D++ D + N + F+S+ L + D I + Sbjct: 35 EIFEKLIEKQLSFFWRPEEVDVSGDRIDYNNLPDHEKHIFISN-LKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDP--------EERTHLFRAME 328 + V IPE + E IHS +Y+ +I V DP E + RA + Sbjct: 94 VALLPIVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVENEYIIKRAGD 153 Query: 329 TMPCVRRKAYWAIRWIGSD--------------------ASFQERL----VAFAAVEGIF 364 K Y + SD +++L ++ A+E I Sbjct: 154 I-----SKYYDDLIAATSDYHRLGEGKHTVNGETITVNLREIKKKLYVCMMSVNALEAIR 208 Query: 365 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP-------- 416 F SF F +R +M G +LI+RDE LH H+ ++L P Sbjct: 209 FYVSFACSFAFAEREVMEGNAKIIKLIARDEALHLTGTQHILNLLRGRHDDPEMADIAQE 268 Query: 417 -AERIHSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-- 472 + + ++A E EKE+ S+IG+N++++ Y+E++ + + +G ++ + Sbjct: 269 CQQECFDLFKEAAEQEKEWAEYLFKDGSMIGLNKEILCQYVEYITNLRMKAVGLEQAYPG 328 Query: 473 NTPNPFDWM 481 NP W+ Sbjct: 329 ANQNPIPWI 337
pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant E238a (375 aa) Score: 60 bits (146), Expect: 1.0306e-07 Length: 312, Idn/Pos/Gap = 74/128/60 (23%/41%/19%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 IFEKLIEKQLSFFWRPEEVDVSRDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPNV 93 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + + IPE + E IHS +++ +I V DP + +F + T ++++A Sbjct: 94 ALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDP---SVVFDDIVTNEQIQKRA 150 Query: 338 ---------------YWAIRWIGSDA--------SFQER-------LVAFAAVEGIFFSG 367 YW + G+ S +E L++ A+E I Sbjct: 151 EGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRXYV 210 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G LI+RD LH H+ ++L + P M A Sbjct: 211 SFACSFAFAERELMEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDP-----EMAEIA 265 Query: 428 VECEKEFVCDALPV-----------------SLIGMNQQLMSAYIEFVADRLLVELGYDR 470 EC++E C L V S+IG+N+ ++ Y+E++ + + +G D Sbjct: 266 EECKQE--CYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDL 323 Query: 471 LWNT-PNPFDWM 481 + T NP W+ Sbjct: 324 PFQTRSNPIPWI 335
gb|AAL77807.1| ribonucleoside-diphosphate reductase beta subunit-like protein [Rana tigrina ranavirus] ref|NP_572003.1| ribonucleoside-diphosphate reductase beta subunit-like protein [Rana tigrina ranavirus] (387 aa) Score: 60 bits (145), Expect: 1.168e-07 Length: 340, Idn/Pos/Gap = 87/128/49 (25%/37%/14%) Query: 200 IFKAEEADRYT----LFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNR-LTEAER 254 I KA D +T P ++ + +H W EI+L D+ W++ +T E+ Sbjct: 58 ITKALAMDMFTTSKCFKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKSGVMTPGEK 117 Query: 255 YFVSHVLAFFAASD----GIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLI 310 FVS VL F D + L++L + F E R E IH + YSLL Sbjct: 118 AFVSCVLRLFTQLDVEVGALYLDHLTQVF----RCNEIRNMLTSFACREAIHQKAYSLLN 173 Query: 311 DAY---------VKDPEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVE 361 D D E T M M C + L+ E Sbjct: 174 DTLGMPDCEYQAFADYVEMTDKLDFMREMDC------------STLPGLARSLLRAVLNE 221 Query: 362 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER--VPAER 419 G+ +F + ++ G M G+ E RDE +H + L+ L +E V + Sbjct: 222 GVSLFAAFVMLLTFQRSGKMKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDI 281 Query: 420 IHSMIRDA---VECEKEFVCDAL----PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 I DA E E+ FV A PV + Q + Y+ +V + +G +L Sbjct: 282 IELFKEDAERVAELEEAFVDLAFQECGPVCELEPKQ--VKDYVLYVINLRAANMGLPKLI 339 Query: 473 N-TPN--PFDWME-LISLQGKTNFFEKRVGEYQKANVTTS 508 P P W++ LI TNFFE V EY+ +T S Sbjct: 340 ERAPEACPIPWVKWLIDGADLTNFFENHVTEYETGGLTGS 379
ref|NP_670275.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia pestis KIM] gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Medievalis str. 91001] ref|NP_992302.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis biovar Medievalis str. 91001] gb|AAM86526.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia pestis KIM] (391 aa) Score: 60 bits (145), Expect: 1.21776e-07 Length: 310, Idn/Pos/Gap = 73/127/49 (23%/40%/15%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 KH + ++ ++ FW EEID++ D + N L + E++ L + D I + Sbjct: 48 KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY-NALPDHEKHIFISNLKYQTLLDSIQGRS 106 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--------ERTHLFRA 326 + + IPE + E IHS +Y+ +I V DP L RA Sbjct: 107 PNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEEILKRA 166 Query: 327 METMP----CVRRKAYWAIRWIGS-------------DASFQERL--VAFAAVEGIFFSG 367 + + +Y+ + G+ D Q L ++ A+E I F Sbjct: 167 KDISAYYDDLIEMTSYYHLLGEGTHQVNGKTVVVKLRDLKKQLYLCLMSVNALEAIRFYV 226 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G ++I+RDE LH H+ +++ E P M A Sbjct: 227 SFACSFAFAERELMEGNAKIIKMIARDEALHLTGTQHILNLMRLGEDDP-----EMAEIA 281 Query: 428 VECEKE----FVCDALPV-----------SLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 EC+++ FV A S+IG+N++++ Y+E++ + + +G + Sbjct: 282 EECQQQCYDLFVLAAQQEKEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPF 341 Query: 473 NT-PNPFDWM 481 +T NP W+ Sbjct: 342 STRTNPIPWI 351
ref|NP_777795.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Bp (Baizongia pistaciae)] sp|Q89AS5|RIR2_BUCBP Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (376 aa) Score: 60 bits (145), Expect: 1.25909e-07 Length: 340, Idn/Pos/Gap = 78/138/46 (22%/40%/13%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 +IFE ++ ++ FW EE+DL+ D ++N + FVS+ L + D I + Sbjct: 35 EIFEKLIEKQLSFFWRPEEVDLSRDYIDFQNLPQHEKHIFVSN-LKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDP--------EERTHLFRAME 328 + V +PE + E IHS +Y+ +I + P + + RA + Sbjct: 94 IALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIINTPSLIFDDIIDNKNIANRAKD 153 Query: 329 TMP----CVRRKAYWAIRWIGSDASFQER---------------LVAFAAVEGIFFSGSF 369 + +YW + G ++ L++ A+E I F SF Sbjct: 154 IAKYYDDLIELTSYWHLFGEGKHTINGKKIKIDLHELKKKLYLCLISVNALEAIRFYVSF 213 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAV- 428 F +R M G LI+RDE LH H+ ++L ++ E + + ++ Sbjct: 214 ACSFAFAEREKMEGNAKIIRLIARDEALHLTSTQHILNILHNDKN--NEGMSDISKECYE 271 Query: 429 ECEKEF--VCDALPV---------SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT-PN 476 EC F V D + S++G+NQ+++S YIE++ + + +G + N Sbjct: 272 ECYHLFIRVSDQEKIWAKYLFQNGSMLGLNQEILSQYIEYITNIRMKAIGLPSPFKILSN 331 Query: 477 PFDWME--LISLQGKTNFFEKRVGEYQKANVTTSATDNVF 514 P W+ LIS + E V Y + + D+ F Sbjct: 332 PIPWINSWLISDNVQVAPQEISVSSYLIGQINSEINDSDF 371
gb|AAC14561.1| ribonucleoside diphosphate reductase small subunit [Corynebacterium ammoniagenes] (329 aa) Score: 60 bits (145), Expect: 1.36865e-07 Length: 266, Idn/Pos/Gap = 63/108/11 (23%/40%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R +FW E+I ++ D+ W N++T E+ V D I Sbjct: 24 IPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSW-NKMTPQEQLATMRVFTGLTLLDTIQGT 82 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + DVE Y ME++H+++YS + P + FR E + Sbjct: 83 VGAISLLPDVETMHEEGVYTNIAFMESVHAKSYSNIFMTLASTP-QINEAFRWSEENENL 141 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RKA + + D +++ VA +E F F +L R + LI R Sbjct: 142 QRKAKIIMSYYNGDDPLKKK-VASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIR 200 Query: 394 DEGLHCDFACHLYS-----MLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H + + Y + AE+ ++ D E E E+ D +G + Sbjct: 201 DESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIY--DDLGWTE 258 Query: 449 QLMSAYIEFVADRLLVELGYDRLWNT 474 + ++ + A++ L LGY+ L+ T Sbjct: 259 DV-KRFLRYNANKALNNLGYEGLFPT 283
ref|ZP_00126389.1| COG0208: Ribonucleotide reductase, beta subunit [Pseudomonas syringae pv. syringae B728a] (78 aa) Score: 60 bits (144), Expect: 1.50021e-07 Length: 74, Idn/Pos/Gap = 30/48/2 (40%/64%/2%) Query: 423 MIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGY-DRLWNTPNPFDWM 481 MI+ + E E+ D +P S++GMN +M Y+ F+A+R L ++G ++ T NPF WM Sbjct: 1 MIQQRTQLEIEYARDTMPRSVLGMNAPIMEDYLNFIANRRLSQIGLKEKCPETTNPFPWM 60 Query: 482 -ELISLQGKTNFFE 494 E+I+L+ + NFFE Sbjct: 61 SEIIALKKERNFFE 74
ref|YP_069788.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pseudotuberculosis IP 32953] emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pseudotuberculosis IP 32953] emb|CAC90051.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis CO92] ref|NP_404817.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis CO92] pir||AH0148 ribonucleoside-diphosphate reductase (EC 1.17.4.1) beta chain [imported] - Yersinia pestis (strain CO92) (376 aa) Score: 60 bits (144), Expect: 1.72884e-07 Length: 310, Idn/Pos/Gap = 73/127/49 (23%/40%/15%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 KH + ++ ++ FW EEID++ D + N L + E++ L + D I + Sbjct: 33 KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY-NALPDHEKHIFISNLKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--------ERTHLFRA 326 + + IPE + E IHS +Y+ +I V DP L RA Sbjct: 92 PNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEEILKRA 151 Query: 327 METMP----CVRRKAYWAIRWIGS-------------DASFQERL--VAFAAVEGIFFSG 367 + + +Y+ + G+ D Q L ++ A+E I F Sbjct: 152 KDISAYYDDLIEMTSYYHLLGEGTHQVNGKTVVVKLRDLKKQLYLCLMSVNALEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G ++I+RDE LH H+ +++ E P M A Sbjct: 212 SFACSFAFAERELMEGNAKIIKMIARDEALHLTGTQHILNLMRLGEDDP-----EMAEIA 266 Query: 428 VECEKE----FVCDALPV-----------SLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 EC+++ FV A S+IG+N++++ Y+E++ + + +G + Sbjct: 267 EECQQQCYDLFVLAAQQEKEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPF 326 Query: 473 NT-PNPFDWM 481 +T NP W+ Sbjct: 327 STRTNPIPWI 336
ref|NP_660527.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] sp|Q8K9W4|RIR2_BUCAP Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (376 aa) Score: 59 bits (143), Expect: 2.02583e-07 Length: 302, Idn/Pos/Gap = 72/126/40 (23%/41%/13%) Query: 219 IFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 IFE ++ ++ FW EEIDL+ D + N + + F+S+ L + D I + Sbjct: 36 IFEKLIEKQLSFFWRPEEIDLSKDRIDFDNLPSNEKHIFISN-LKYQTLLDSIQGRSPNI 94 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--------ERTHLFRAMET 329 F+ V IPE + E IHS +Y+ +I + +P + RA + Sbjct: 95 AFLPIVSIPELETWIETWSFSETIHSRSYTHIIRNIINNPSIVFDDIISNKNINDRAQDI 154 Query: 330 M----PCVRRKAYWAIRWIGSDASFQER---------------LVAFAAVEGIFFSGSFC 370 +R AYW + G+ +++ L++ +E I F SF Sbjct: 155 SIYYDELIRITAYWHLLGEGNHKINEKKVEINLKLLKRRLYLCLISVNVLEAIRFYVSFA 214 Query: 371 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPA---------ERIH 421 F +R +M G LI+RDE LH H+ ++L E+ E Sbjct: 215 CSFAFAEREIMEGNAKIIRLIARDEALHLTGTQHILNILNNEKNNENMKNTVLECREEAI 274 Query: 422 SMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLW-NTPNPFD 479 + A E EK++ S++G+N+ ++ YIE++ + + +G+ + T NP Sbjct: 275 KIFISASEQEKKWAKYLFQDGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFEKTSNPIP 334 Query: 480 WM 481 W+ Sbjct: 335 WI 336
ref|NP_962029.1| NrdG [Mycobacterium avium subsp. paratuberculosis str. k10] gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis str. k10] (324 aa) Score: 59 bits (143), Expect: 2.02583e-07 Length: 257, Idn/Pos/Gap = 54/108/11 (21%/42%/4%) Query: 221 EFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFM 280 E + R +FW E++ ++ D+ W LT E+ V D I A + Sbjct: 26 EVWDRLTGNFWLPEKVPVSNDLQSWAT-LTAHEKQMTMRVFTGLTLLDTIQGTVGAVSLI 84 Query: 281 RDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWA 340 D P Y ME++H+ +YS + E FR E P ++RKA Sbjct: 85 PDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCSTAE-IDDAFRWSEENPNLQRKAEIV 143 Query: 341 IRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 +++ D + ++ + +F+SG + ++W R + LI RDE +H Sbjct: 144 MQYYKGDEPLKRKVASTLLESFLFYSGFYLPMYW-SSRAKLTNTADMIRLIIRDEAVHGY 202 Query: 401 FACHLYS-----MLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 + + Y + A+ + + + ++ + + E E+ D +G+ + + ++ Sbjct: 203 YIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY--DEVGLTEDV-KKFL 259 Query: 456 EFVADRLLVELGYDRLW 472 + A++ L+ LGY+ L+ Sbjct: 260 RYNANKALMNLGYEALF 276
ref|YP_049304.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia carotovora subsp. atroseptica SCRI1043] emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia carotovora subsp. atroseptica SCRI1043] (376 aa) Score: 59 bits (143), Expect: 2.27685e-07 Length: 341, Idn/Pos/Gap = 77/141/52 (22%/41%/15%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 +IFE ++ ++ FW EE+D++ D ++ + F+S+ L + D I + Sbjct: 35 EIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPDHEKHIFISN-LKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--------ERTHLFRAME 328 + + IPE + E IHS +Y+ +I V DP L RA + Sbjct: 94 VALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSLVFDDIVANEEILKRAKD 153 Query: 329 TM----PCVRRKAYWAIRWIGSDA-----------SFQERL----VAFAAVEGIFFSGSF 369 + +Y+ + G+ + +++L ++ A+E I F SF Sbjct: 154 ISGYYDSLIEMTSYYHLLGEGTHQVNGKTVTVNLHALKKQLYVCLMSVNALEAIRFYVSF 213 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVE 429 F +R LM G +LI+RDE LH H+ +++ + P M + A E Sbjct: 214 ACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDP-----EMAQIAEE 268 Query: 430 CEKE----FVCDALPV-----------SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT 474 C++E FV A S+IG+N+ ++ Y+E++ + + +G + T Sbjct: 269 CQQECYDLFVLAAQQEKEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQGVGLSLPFQT 328 Query: 475 -PNPFDWME--LISLQGKTNFFEKRVGEYQKANVTTSATDN 512 NP W+ L+S + E V Y + + +D+ Sbjct: 329 RTNPIPWINAWLVSDNVQVAPQEVEVSSYLVGQIDSEISDD 369
emb|CAA70766.1| ribonucleotide reductase subunit R2F [Corynebacterium ammoniagenes] pdb|1KGP|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Mn Substituted Form pdb|1KGP|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Mn Substituted Form pdb|1KGP|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Mn Substituted Form pdb|1KGP|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Mn Substituted Form pdb|1KGO|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe Containing, Form pdb|1KGO|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe Containing, Form pdb|1KGO|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe Containing, Form pdb|1KGO|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe Containing, Form pdb|1KGN|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe Containing, Form pdb|1KGN|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe Containing, Form pdb|1KGN|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe Containing, Form pdb|1KGN|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe Containing, Form pdb|1OQU|D Chain D, A Protein Coordinated Tri-Nuclear Fe Complex Formed During Soaking Of Crystals Of The Ribonucleotide Reductase R2f Protein From Corynebacterium Ammoniagenes pdb|1OQU|C Chain C, A Protein Coordinated Tri-Nuclear Fe Complex Formed During Soaking Of Crystals Of The Ribonucleotide Reductase R2f Protein From Corynebacterium Ammoniagenes pdb|1OQU|B Chain B, A Protein Coordinated Tri-Nuclear Fe Complex Formed During Soaking Of Crystals Of The Ribonucleotide Reductase R2f Protein From Corynebacterium Ammoniagenes pdb|1OQU|A Chain A, A Protein Coordinated Tri-Nuclear Fe Complex Formed During Soaking Of Crystals Of The Ribonucleotide Reductase R2f Protein From Corynebacterium Ammoniagenes (329 aa) Score: 59 bits (142), Expect: 2.47498e-07 Length: 266, Idn/Pos/Gap = 62/107/11 (23%/40%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R +FW E+I ++ D+ W N++T E+ V D I Sbjct: 24 IPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSW-NKMTPQEQLATMRVFTGLTLLDTIQGT 82 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + D E Y ME++H+++YS + P + FR E + Sbjct: 83 VGAISLLPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTP-QINEAFRWSEENENL 141 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RKA + + D +++ VA +E F F +L R + LI R Sbjct: 142 QRKAKIIMSYYNGDDPLKKK-VASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIR 200 Query: 394 DEGLHCDFACHLYS-----MLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H + + Y + AE+ ++ D E E E+ D +G + Sbjct: 201 DESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIY--DDLGWTE 258 Query: 449 QLMSAYIEFVADRLLVELGYDRLWNT 474 + ++ + A++ L LGY+ L+ T Sbjct: 259 DV-KRFLRYNANKALNNLGYEGLFPT 283
ref|YP_024511.1| putative ribonucleotide reductase minor subunit [Staphylococcus phage K] gb|AAO47530.1| ORF81 [Staphylococcus phage K] (349 aa) Score: 59 bits (142), Expect: 2.66799e-07 Length: 322, Idn/Pos/Gap = 75/139/44 (23%/43%/13%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASD------GIVLENL 275 ++++ ++ FWT EE D++ D+ W N LTE+E+ VLA D G+ L + Sbjct: 32 YWEQGISQFWTPEEFDVSRDLSSW-NSLTESEKNTYKKVLAGLTGLDTKQGGEGMNLVSY 90 Query: 276 AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRR 335 E P+ + + F ME IH+++YS + + + E L +E ++ Sbjct: 91 HE------PRPKYQAVFAFMGGMEEIHAKSYSHIFTTLLSNKETSYLLDTWVEENDFLKV 144 Query: 336 KA----YWAIRWIGSDASFQERL---VAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 388 KA Y+ + + + + +R VA A +E F F L RG M Sbjct: 145 KAQFIGYYYDQLLKPNPTIFDRYMAKVASAFLESALFYSGFYYPLLLAGRGQMTQSGAII 204 Query: 389 ELISRDEGLHCD----FACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDAL--PVS 442 I++DE H A + Y++L EE+ A++ + D + + +L P+ Sbjct: 205 YKITQDEAYHGSAVGLTAQYDYNLLTEEEKKQADKETYELLDILYTNEVAYTHSLYDPLE 264 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTN--------FFE 494 L + + Y+++ +R L LG + +N P P++ + ++ +TN FF Sbjct: 265 L----SEDVINYVQYNFNRALQNLGREDYFN-PEPYNPI----VENQTNVDRLRNVDFFS 315 Query: 495 KRVGEYQKANVTTSATDNVFAL 516 + +Y+K+ D F+ Sbjct: 316 GK-ADYEKSTNIKDIKDEDFSF 336
ref|NP_878762.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus Blochmannia floridanus] emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus Blochmannia floridanus] (376 aa) Score: 59 bits (142), Expect: 3.0237e-07 Length: 340, Idn/Pos/Gap = 77/133/41 (22%/39%/12%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 KH + ++ ++ FW EEID++ D +++ + F+S+ L + D I + Sbjct: 33 KHIIFEKLIEKQLSFFWRPEEIDISKDRIDYQSLPNHEKHIFISN-LKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--------ERTHLFRA 326 + + IPE + E IHS +Y+ +I V P + L RA Sbjct: 92 PNIALLPLISIPELETWVETWSFFETIHSRSYTHIIRNIVNHPSVIFDDIVTNKEILKRA 151 Query: 327 ----METMPCVRRKAYWAIRWIGS--------DASFQER-------LVAFAAVEGIFFSG 367 M ++ Y+ IG + E L++ +E I F Sbjct: 152 KDISMYYDDLIKLTNYYYTLGIGKHRVNNTTITVNLHELKKKLYLCLISVNVLEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP---------AE 418 SF F +R LM G I+RDE LH + H+ +++ + P E Sbjct: 212 SFACSFAFAERELMEGNAKIIRFIARDESLHLNATQHILNLMRSGSDDPEMVDISLICQE 271 Query: 419 RIHSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP-N 476 +++ A E EK + S+IG+N++++ YIE++ + + +G +NT N Sbjct: 272 ESYNLFLMAAEQEKTWAHYLFKDGSMIGLNKEILCQYIEYITNIRMQAIGLKTPFNTKTN 331 Query: 477 PFDWME--LISLQGKTNFFEKRVGEYQKANVTTSATDNVF 514 W+ L S + E Y + T DN F Sbjct: 332 SIPWINAWLSSDNVQVAPQEVESSSYLVGQIDTQIQDNEF 371
gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus ducreyi 35000HP] ref|NP_874099.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus ducreyi 35000HP] (376 aa) Score: 58 bits (141), Expect: 3.57283e-07 Length: 343, Idn/Pos/Gap = 76/137/52 (22%/39%/15%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 ++FE ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 35 ELFEKLIEKQLSFFWRPEEVDVSQDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRSPN 93 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAMET 329 F+ V IPE + E IHS +Y+ +I V DP + + Sbjct: 94 VAFLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRARD 153 Query: 330 MPC-----VRRKAYWAI------RWIGSDASFQER---------LVAFAAVEGIFFSGSF 369 + C +R + + + G + R L++ +E I F SF Sbjct: 154 ISCYYDDLIRDSQLYTLYGEGTYQVDGKACAVTLRNLKRQLYLCLMSVNVLEAIRFYVSF 213 Query: 370 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVE 429 F +R LM G + I+RDE LH + +++ + + P M A+E Sbjct: 214 ACSFAFAERQLMEGNAKIIKFIARDEYLHLAGTQQMLNIIASGQDDP-----EMAEIAIE 268 Query: 430 CEKE----FVCDALPV-----------SLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT 474 C++E FV A S+IG+N++++ Y+E++ + + +G + T Sbjct: 269 CQQEAYDLFVAAAEQEKEWAEYLFKDGSMIGLNKEILVKYVEYITNIRMQSVGLPLPFAT 328 Query: 475 -PNPFDWME--LISLQGKTNFFEKRVGEYQKANVTTSATDNVF 514 NP W+ L+S + E V Y + + N F Sbjct: 329 QSNPIPWINAWLVSDNVQVAPQEVEVSSYLVGQIDSKVDSNDF 371
ref|ZP_00332427.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus suis 89/1591] (320 aa) Score: 58 bits (141), Expect: 3.81945e-07 Length: 275, Idn/Pos/Gap = 64/125/21 (23%/45%/7%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +LT E+ V V D + E + D Sbjct: 23 WEKLTEQFWLDTRIPLSNDLDDWR-KLTAEEKDLVGKVFGGLTLLDTLQSETGVQALRND 81 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 + P Y ME++H+++YS + + E +F + ++RKA I Sbjct: 82 IRTPHEEAVYNNIQFMESVHAKSYSSIFST-LNTKSEIEDIFEWTNSNEYLQRKAK-IIN 139 Query: 343 WIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 I + E+ VA +E +F+SG F +++L L + +LI RDE +H + Sbjct: 140 EIYETGTPLEKKVASVFLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTY 198 Query: 402 ACHLYSM----LPAEERVP-AERIHSMIRDAVECEKEF---VCDALPVSLIGMNQQLMSA 453 + + + L EE+ + ++ ++ E E+ + + DA +G +++++ Sbjct: 199 IGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSLYDA-----VGWTEEVLT- 252 Query: 454 YIEFVADRLLVELGYDRLWNTPNPFDWMELISLQG 488 ++ + A++ L+ LG D L+ P+ D + I + G Sbjct: 253 FLRYNANKALMNLGQDPLF--PDSADDVNPIIMNG 285
ref|NP_928595.1| ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide reductase 2) (R2f protein) [Photorhabdus luminescens subsp. laumondii TTO1] emb|CAE13578.1| ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide reductase 2) (R2f protein) [Photorhabdus luminescens subsp. laumondii TTO1] (319 aa) Score: 58 bits (140), Expect: 5.20087e-07 Length: 269, Idn/Pos/Gap = 60/109/21 (22%/40%/7%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R +FW E+I L+ D+ W N LT E+ V D I Sbjct: 14 IEDDKDLEVWNRLTTNFWLPEKIPLSNDITSW-NTLTTEEKKLTIRVFTGLTLLDTIQNT 72 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYS-----LLIDAYVKDPEERTHLFRAME 328 A M D P ME +H+ +YS L + V D +R E Sbjct: 73 VGAPALMEDALTPHEEAVMSNISFMEAVHARSYSSIFSTLCLTTDVDDA------YRWSE 126 Query: 329 TMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 388 ++ KA + + ++++ + +F+SG + ++W RG++ Sbjct: 127 KSFSLQNKAKIILNYYSYHHPLKKKIASVFLESFLFYSGFYLPMYW-SSRGILTNTADLI 185 Query: 389 ELISRDEGLH-----CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LI RDE +H F L E++ E S++ + E E ++ + + Sbjct: 186 RLIIRDEAIHGYYIGYKFQQSLKKHSTLEQKEIKEFTFSLLLELYENEIKYTEELY--DI 243 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLW 472 +G + + ++ + A++ L+ LGY+ L+ Sbjct: 244 VGWTEDI-KKFLHYNANKALMNLGYETLF 271
ref|ZP_00201872.1| COG0208: Ribonucleotide reductase, beta subunit [Methylobacillus flagellatus KT] (377 aa) Score: 58 bits (139), Expect: 5.7008e-07 Length: 307, Idn/Pos/Gap = 66/123/42 (21%/40%/13%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 K+P + ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 33 KYPVFEKLIEKQLSFFWRPEEVDVSQDRIDYQG-LPEHEKHIFISNLKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDP--------EERTHLFRA 326 + V +PE + E IHS +Y+ +I V DP + RA Sbjct: 92 PNVALLPLVSLPELETWVETWAFSETIHSRSYTHIIRNIVSDPALIFDDIVRNENIVARA 151 Query: 327 METMPCVRRKAYWAIRWI----------GSDASFQER---------LVAFAAVEGIFFSG 367 + ++ + + G + R L++ +E I F Sbjct: 152 SDISAYYDDLIHYTMLYSQLGKGDHVINGETKTVNLRELKKLLYLCLMSVNILEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP---------AE 418 SF F +R +M G LI+RDE LH H+ +++ + + P + Sbjct: 212 SFACSFAFAERKVMEGNAKIIRLIARDEALHLTGTQHMLNIMRSGQDDPEFAGIASELQD 271 Query: 419 RIHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP- 475 M + A E EK++ D L S+IG+N+ ++ Y+E++ + + +G + Sbjct: 272 ECFEMFKRAAEQEKKWA-DYLFKDGSMIGLNRDILCQYVEYITNNRMASVGLSAAFPNAK 330 Query: 476 -NPFDWM 481 NP W+ Sbjct: 331 NNPIPWI 337
ref|NP_051641.1| ribonucleoside-diphosphate reductase, beta chain [Deinococcus radiodurans R1] gb|AAF12548.1|AE001826_17 ribonucleoside-diphosphate reductase, beta chain [Deinococcus radiodurans] pir||B75630 ribonucleoside-diphosphate reductase, beta chain - Deinococcus radiodurans (strain R1) (354 aa) Score: 58 bits (139), Expect: 6.19687e-07 Length: 198, Idn/Pos/Gap = 56/86/13 (28%/43%/6%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR 281 FY ++ + W EEI L D W+ L++ ER+ H A A D + E R Sbjct: 43 FYAKYTSQLWFPEEIPLTNDALAWKT-LSDEERWTYIHASAGLNALDTLQGEVGMPRLRD 101 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAI 341 V+ + FQ ME+IH+ +YSL+ ++ EER +F + T P ++ K I Sbjct: 102 LVDGHIRKATLQFQGMMEDIHARSYSLMNKTFLTASEER-EVFEWVRTQPQLQHKIA-VI 159 Query: 342 RWIG-----SDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 396 + + SD ++LV +E F F +L +G M LI DE Sbjct: 160 QGVYRDPDVSDLGVWKKLVVSCMLETALFYSGFFYPLYLAGQGQMVSAGEIFNLIILDEA 219 Query: 397 LHCDFACHLYSMLPAEER 414 LH +Y L A+E+ Sbjct: 220 LH-----GVYVALLAQEK 232
ref|ZP_00132960.2| COG0208: Ribonucleotide reductase, beta subunit [Haemophilus somnus 2336] ref|ZP_00122908.1| COG0208: Ribonucleotide reductase, beta subunit [Haemophilus somnus 129PT] (376 aa) Score: 58 bits (139), Expect: 6.68013e-07 Length: 306, Idn/Pos/Gap = 69/123/41 (22%/40%/13%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 K+ + ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 33 KYETFEKLIEKQLSFFWRPEEVDVSQDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDP----------EERTHLF 324 + V IPE + E IHS +Y+ +I V DP EE Sbjct: 92 PNVALLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRA 151 Query: 325 RAMETM--PCVRRKAYWAIRWIGS---------------DASFQERLVAFAAVEGIFFSG 367 R + + +R + + G+ L++ A+E I F Sbjct: 152 RDISSYYDDLIRDSQLYGLYGEGTYTVDGKACKVTLRNLKRQLYLCLMSVNALEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP---------AE 418 SF F +R LM G + I+RDE LH H+ +++ A + P + Sbjct: 212 SFACSFAFAERKLMEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQ 271 Query: 419 RIHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNT-P 475 + + A E EKE+ D L S+IG+N+ ++ Y+E++ + + +G + Sbjct: 272 EAYELFVAAAEQEKEWA-DYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARS 330 Query: 476 NPFDWM 481 NP W+ Sbjct: 331 NPIPWI 336
ref|NP_439802.1| ribonucleoside diphosphate reductase beta chain [Haemophilus influenzae Rd KW20] gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB) [Haemophilus influenzae Rd KW20] ref|ZP_00157428.1| COG0208: Ribonucleotide reductase, beta subunit [Haemophilus influenzae R2866] ref|ZP_00154560.1| COG0208: Ribonucleotide reductase, beta subunit [Haemophilus influenzae R2846] pir||C64135 ribonucleoside-diphosphate reductase (EC 1.17.4.1) beta chain - Haemophilus influenzae (strain Rd KW20) sp|P43755|RIR2_HAEIN Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (376 aa) Score: 57 bits (138), Expect: 7.44548e-07 Length: 345, Idn/Pos/Gap = 78/136/51 (22%/39%/14%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 K+ + ++ ++ FW EE+D++ D + L E E++ L + D I + Sbjct: 33 KYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA-ALPEHEKHIFISNLKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE--------ERTHLFRA 326 + V IPE + E IHS +Y+ +I V DP + RA Sbjct: 92 PNVALLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRA 151 Query: 327 METMP----CVRRKAYWAIRWIGSDA-----------SFQERL----VAFAAVEGIFFSG 367 + +R + + G+ S +++L ++ A+E I F Sbjct: 152 QDISSYYDDLIRDSQLYGLYGEGTYTVDGKECVVTLRSLKKQLYLCLMSVNALEAIRFYV 211 Query: 368 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDA 427 SF F +R LM G + I+RDE LH H+ +++ A + P M A Sbjct: 212 SFACSFAFAERRLMEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDP-----EMAEIA 266 Query: 428 VECEKE----FVCDALPV-----------SLIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 EC++E FV A S+IG+N+ ++ Y+E++ + + +G + Sbjct: 267 EECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPF 326 Query: 473 NT-PNPFDWME--LISLQGKTNFFEKRVGEYQKANVTTSATDNVF 514 T NP W+ L+S + E V Y + + N F Sbjct: 327 QTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVGQIDSKVDTNDF 371
ref|ZP_00382411.1| COG0208: Ribonucleotide reductase, beta subunit [Lactococcus lactis subsp. cremoris SK11] (325 aa) Score: 57 bits (138), Expect: 7.89329e-07 Length: 256, Idn/Pos/Gap = 54/119/13 (21%/46%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ + FW + ++ D+D WR +L + ER + A D + + AE D Sbjct: 30 WEKLTSQFWLDTRVPVSNDLDDWR-KLPQLERDTFAKAFAGLTLLDTLQSVDGAEVLKHD 88 Query: 283 VEIP-EARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAI 341 P E CF Q ME++H+++YS + + +E LF ++T ++ KA Sbjct: 89 ARTPQEIACFNNIQF-MESVHAKSYSTIFST-LNTKKEIEELFNWVDTNVYMQTKAEIIN 146 Query: 342 RWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 + S + Q+++ + +F+SG + + +L ++ +LI RDE +H + Sbjct: 147 KIYESGTALQKKVASVFLETCLFYSGFYTPLLYLGNNKMINSAEII-KLIIRDESVHGTY 205 Query: 402 ACHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + L +E+ + ++ ++ E E+ + L +G ++++ ++ Sbjct: 206 IGYKFQLGFNELSEDEQSEFRDWMYELLYKLYENEENY--SHLLYDKVGWTDEVLT-FLR 262 Query: 457 FVADRLLVELGYDRLW 472 + A++ L+ LG D L+ Sbjct: 263 YNANKALMNLGQDPLF 278
ref|YP_060416.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS10394] gb|AAT87233.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus pyogenes MGAS10394] gb|AAL97983.1| ribonucleotide diphosphate reductase small subunit [Streptococcus pyogenes MGAS8232] ref|NP_607484.1| ribonucleotide diphosphate reductase small subunit [Streptococcus pyogenes MGAS8232] (319 aa) Score: 57 bits (138), Expect: 8.29851e-07 Length: 299, Idn/Pos/Gap = 61/128/15 (20%/42%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +L+ E+ V V D + E E D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWR-KLSLQEKDLVGKVFGGLTLLDTMQSETGVEAIRAD 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V P ME++H+++YS + + +E +F ++ KA Sbjct: 81 VRTPHEEAVLNNIQFMESVHAKSYSSIFST-LNTKKEIEEIFEWTNNNEFLQEKARIINN 139 Query: 343 WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 + + Q+++ + +F+SG F +++L L + +LI RDE +H + Sbjct: 140 IYANGDALQKKVASTYLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTYI 198 Query: 403 CHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEF 457 + + + LP +E+ + ++ ++ E E+++ +G +++M+ ++ + Sbjct: 199 GYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYT--KTLYDGVGWTEEVMT-FLRY 255 Query: 458 VADRLLVELGYDRLW----NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDN 512 A++ L+ LG D L+ N NP + + +FF + Y +V + D+ Sbjct: 256 NANKALMNLGQDPLFPDTANDVNPIVMNGISTGTSNHDFFSQVGNGYLLGSVEAMSDDD 314
ref|NP_940258.1| ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium diphtheriae NCTC 13129] emb|CAE50457.1| ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium diphtheriae] (341 aa) Score: 57 bits (137), Expect: 9.80557e-07 Length: 264, Idn/Pos/Gap = 61/111/24 (23%/42%/9%) Query: 221 EFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFM 280 E ++R A+FW E++ L+ D+ WR +T R V+ +L+ L Sbjct: 36 EVWQRLTANFWLPEKVPLSNDLPTWRT-MTPVYRELVTRTFTGLT-----LLDTLQASVG 89 Query: 281 RDVEIPEA-----RCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRR 335 +IP+A + Y M+ +H+ +YS + E A+ P ++R Sbjct: 90 EISQIPDAHTEHEQAVYANIAFMQAVHARSYSSVFSTMCSSTEIDDAYTWAISN-PLLQR 148 Query: 336 KAYWAIR-WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 394 +A I + GSD +R VA + + F WL RG + LI RD Sbjct: 149 RATRVIEHYYGSDP--LKRKVASTLLSSLLLYAGFYLPLWLSTRGKLMNTADMIRLILRD 206 Query: 395 EGLHCDFACHLYS----MLPAEERVPAERIHSMIRDAVECEKEFVCDALPV-----SLIG 445 + +H ++ + Y + P AE +S+ + ++ EK + D +L G Sbjct: 207 KAVHGYYSGYKYQRGLELKPERANEMAEFTYSLCDELLDMEKAYTADLYAPADQANALEG 266 Query: 446 MNQQLMSAYIEFVADRLLVELGYD 469 + + +++ + AD+ L+ LGY+ Sbjct: 267 LTLDGVMSFVYYNADKALMNLGYE 290
gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O1 biovar eltor str. N16961] ref|NP_230900.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae O1 biovar eltor str. N16961] pir||D82223 ribonucleoside-diphosphate reductase, beta chain VC1255 [imported] - Vibrio cholerae (strain N16961 serogroup O1) (389 aa) Score: 57 bits (137), Expect: 9.80557e-07 Length: 310, Idn/Pos/Gap = 68/123/53 (21%/39%/17%) Query: 218 KIFE-FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLA 276 +IFE ++ ++ FW EE+D+++D + +L + E++ L + D I + Sbjct: 47 EIFEKLIEKQLSFFWRPEEVDVSSDRIDY-GKLPDHEKHIFISNLKYQTLLDSIQGRSPN 105 Query: 277 ERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-------ERTHLFRAMET 329 + V +PE + E IHS +Y+ +I V DP E H+ + + Sbjct: 106 VALLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKD 165 Query: 330 MPCVRRKAYW-------------------------AIRWIGSDASFQERLVAFAAVEGIF 364 + Y+ + L++ A+E I Sbjct: 166 I-----AHYYDDLIELTNDYHRYGEGQHQINGETITVSLKELKKKLYLCLMSVNALEAIR 220 Query: 365 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHL----------YSMLPAEER 414 F SF F +R LM G +LI+RDE LH H+ ++ L E Sbjct: 221 FYVSFACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEE 280 Query: 415 VPAERIHSMIRDAVECEKEFVCDALP-VSLIGMNQQLMSAYIEFVADRLLVELGYDRLW- 472 E + ++A E EKE+ S+IG+N+ ++ Y+E++ + + +G + + Sbjct: 281 CKQESF-DLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYP 339 Query: 473 -NTPNPFDWM 481 T NP W+ Sbjct: 340 AATNNPIPWI 349
ref|NP_814254.1| ribonucleoside-diphosphate reductase 2, beta subunit [Enterococcus faecalis V583] gb|AAO80325.1| ribonucleoside-diphosphate reductase 2, beta subunit [Enterococcus faecalis V583] (321 aa) Score: 57 bits (137), Expect: 1.07481e-06 Length: 306, Idn/Pos/Gap = 65/138/18 (21%/45%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR L++ E+ V +V D + E+ ++ D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWRT-LSDLEKTTVGYVFGGLTLLDTVQSESGMDQLRND 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V P ME++H+++YS + + +E +F T ++ KA I Sbjct: 81 VRTPHEEAVLNNIQFMESVHAKSYSSIFST-LNTKKEIDDIFEWTNTNKHLQYKAE-RIN 138 Query: 343 WIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 I + + E+ +A +E +F+SG + +++L L + +LI RDE +H + Sbjct: 139 EIYKNGTPLEKKIASVFLETFLFYSGFYTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTY 197 Query: 402 ACHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + LP +E+ + +++++ + E E+ + + +G +++ + ++ Sbjct: 198 IGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELY--DDLGWTEEVKT-FLR 254 Query: 457 FVADRLLVELGYDRLW----NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDN 512 + A++ L+ LG D L+ N NP + + +FF + Y V D+ Sbjct: 255 YNANKALMNLGMDPLFADTANDVNPIVMNGISTGTSNHDFFSQVGNGYLLGTVEAMKDDD 314 Query: 513 -VFALD 517 ++ LD Sbjct: 315 YLYGLD 320
ref|NP_802073.1| putative ribonucleotide diphosphate reductase, small subunit [Streptococcus pyogenes SSI-1] ref|NP_664854.1| putative ribonucleoside-diphosphate reductase 2 beta subunit [Streptococcus pyogenes MGAS315] gb|AAM79657.1| putative ribonucleoside-diphosphate reductase 2 beta subunit [Streptococcus pyogenes MGAS315] gb|AAK34203.1| ribonucleotide diphosphate reductase small subunit [Streptococcus pyogenes M1 GAS] dbj|BAC63906.1| putative ribonucleotide diphosphate reductase, small subunit [Streptococcus pyogenes SSI-1] ref|NP_269482.1| ribonucleotide diphosphate reductase small subunit [Streptococcus pyogenes M1 GAS] (319 aa) Score: 57 bits (137), Expect: 1.16834e-06 Length: 299, Idn/Pos/Gap = 61/128/15 (20%/42%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +L+ E+ V V D + E E D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWR-KLSLQEKDLVGKVFGGLTLLDTMQSETGVEAIRAD 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V P ME++H+++YS + + +E +F ++ KA Sbjct: 81 VRTPHEEAVLNNIQFMESVHAKSYSSIFST-LNTKKEIEEIFEWTNNNEFLQEKARIIND 139 Query: 343 WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 + + Q+++ + +F+SG F +++L L + +LI RDE +H + Sbjct: 140 IYANGDALQKKVASTYLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTYI 198 Query: 403 CHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEF 457 + + + LP +E+ + ++ ++ E E+++ +G +++M+ ++ + Sbjct: 199 GYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYT--KTLYDGVGWTEEVMT-FLRY 255 Query: 458 VADRLLVELGYDRLW----NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDN 512 A++ L+ LG D L+ N NP + + +FF + Y +V + D+ Sbjct: 256 NANKALMNLGQDPLFPDTANDVNPIVMNGISTGTSNHDFFSQVGNGYLLGSVEAMSDDD 314
ref|ZP_00366279.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus pyogenes M49 591] (319 aa) Score: 56 bits (136), Expect: 1.25945e-06 Length: 299, Idn/Pos/Gap = 61/128/15 (20%/42%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +L+ E+ V V D + E E D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWR-KLSLQEKDLVGKVFGGLTLLDTMQSETGVEAIRAD 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V P ME++H+++YS + + +E +F +++KA Sbjct: 81 VRTPHEEAVLNNIQFMESVHAKSYSSIFST-LNTKKEIEEIFEWTNNNEFLQKKAQIINE 139 Query: 343 WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 + Q+++ + +F+SG F +++L L + +LI RDE +H + Sbjct: 140 IYEHGDALQKKVASTYLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTYI 198 Query: 403 CHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEF 457 + + + LP +E+ + ++ ++ E E+++ +G +++M+ ++ + Sbjct: 199 GYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYT--KTLYDGVGWTEEVMT-FLRY 255 Query: 458 VADRLLVELGYDRLW----NTPNPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDN 512 A++ L+ LG D L+ N NP + + +FF + Y +V + D+ Sbjct: 256 NANKALMNLGQDPLFPDTANDVNPIVMNGISTGTSNHDFFSQVGNGYLLGSVEAMSDDD 314
ref|NP_245656.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70] gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70] (376 aa) Score: 56 bits (136), Expect: 1.40375e-06 Length: 309, Idn/Pos/Gap = 70/126/47 (22%/40%/15%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 K+ + ++ ++ FW EE+D++ D ++ L E E++ L + D I + Sbjct: 33 KYETFEKLIEKQLSFFWRPEEVDVSQDRIDYQ-ALPEHEKHIFISNLKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVR 334 + V IPE + E IHS +Y+ +I V DP + +F + T + Sbjct: 92 PNVALLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIVNDP---SVIFDDIVTNEEII 148 Query: 335 RKA-----YW----------------AIRWIGSDASFQER---------LVAFAAVEGIF 364 ++A Y+ G D R L++ A+E I Sbjct: 149 KRAKDISAYYDDLIRDSQLYTLYGEGTYNVDGQDCVVTLRNLKRQLYLCLMSVNALEAIR 208 Query: 365 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVP-------- 416 F SF F +R LM G + I+RDE LH H+ +++ + + P Sbjct: 209 FYVSFACSFAFAERKLMEGNAKIIKFIARDEALHLTGTQHILNIMASGQDDPEMAEIVEE 268 Query: 417 -AERIHSMIRDAVECEKEFVCDAL--PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWN 473 + + + A E EKE+ D L S+IG+N+ ++ Y+E++ + + +G + Sbjct: 269 CKQEAYDLFVAAAEQEKEWA-DYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQ 327 Query: 474 T-PNPFDWM 481 NP W+ Sbjct: 328 ARSNPIPWI 336
emb|CAD46480.1| Unknown [Streptococcus agalactiae NEM316] ref|NP_735286.1| hypothetical protein gbs0836 [Streptococcus agalactiae NEM316] ref|NP_687833.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus agalactiae 2603V/R] gb|AAM99705.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus agalactiae 2603V/R] (319 aa) Score: 56 bits (135), Expect: 1.81812e-06 Length: 285, Idn/Pos/Gap = 62/123/16 (21%/43%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +L+ E+ V V D + E E D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWR-KLSAQEKDLVGKVFGGLTLLDTMQSETGVEAIRAD 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V P ME++H+++YS + + E +F ++ KA Sbjct: 81 VRTPHEEAVLNNIQFMESVHAKSYSSIFST-LNTKSEIEEIFEWTNNNEFLQEKARIIND 139 Query: 343 WIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 402 + + Q+++ + +F+SG F +++L L + +LI RDE +H + Sbjct: 140 IYANGNALQKKVASTYLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTYI 198 Query: 403 CHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIEF 457 + + + LP +E+ + ++ ++ E E+++ +G +++M+ ++ + Sbjct: 199 GYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYT--KTLYDGVGWTEEVMT-FLRY 255 Query: 458 VADRLLVELGYDRLW----NTPNPFDWMELISLQGKTNFFEKRVG 498 A++ L+ LG D L+ N NP M IS + F +VG Sbjct: 256 NANKALMNLGQDPLFPDTANDVNPI-VMNGISTGTSNHDFFSQVG 299
ref|NP_302193.1| ribonucleotide reductase small subunit [Mycobacterium leprae TN] emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae] pir||E87125 ribonucleotide reductase small subunit [imported] - Mycobacterium leprae sp|Q9CBQ2|RIR2_MYCLE Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (325 aa) Score: 56 bits (135), Expect: 1.94362e-06 Length: 257, Idn/Pos/Gap = 55/105/11 (21%/40%/4%) Query: 221 EFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFM 280 E + R +FW E++ ++ D+ W LT +E+ V D I A + Sbjct: 27 EVWDRLTGNFWLPEKVPVSNDLPSW-GTLTASEKQLTMRVFTGLTLLDTIQGTVGAVSLI 85 Query: 281 RDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWA 340 D P Y ME++H+++YS + E FR E ++RKA Sbjct: 86 PDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAE-IDEAFRWSEENNNLQRKAKIV 144 Query: 341 IRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH-- 398 + + D + ++ + +F+SG + ++W R + LI RDE +H Sbjct: 145 MEYYRGDEPLKRKVASTLLESFLFYSGFYLPMYW-SSRAKLTNTADMIRLIIRDEAVHGY 203 Query: 399 ---CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 F L + A E + ++ + + E E+ D +G+ + + ++ Sbjct: 204 YIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQDLY--DRVGLTEDV-KKFL 260 Query: 456 EFVADRLLVELGYDRLW 472 + A++ L+ LGY+ L+ Sbjct: 261 RYNANKALMNLGYEALF 277
ref|YP_141630.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus thermophilus CNRZ1066] ref|YP_139718.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus thermophilus LMG 18311] gb|AAV62815.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus thermophilus CNRZ1066] ref|ZP_00389832.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus thermophilus LMD-9] gb|AAV60903.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus thermophilus LMG 18311] (320 aa) Score: 55 bits (133), Expect: 2.90099e-06 Length: 286, Idn/Pos/Gap = 68/127/18 (23%/44%/6%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +L+ E+ V V D + + E D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWR-KLSAEEKDLVGKVFGGLTLLDTMQSQTGVEAIRAD 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V P ME++H+++YS + + E +F + ++ KA I Sbjct: 81 VRTPHEEAVLNNIQFMESVHAKSYSSIFST-LNTKSEIEEIFEWTNSNKYLQTKAK-IIN 138 Query: 343 WIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 I + + ++ VA +E +F+SG F +++L L + +LI RDE +H + Sbjct: 139 DIYENGTALQKKVASTYLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTY 197 Query: 402 ACHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + LP +E+ E ++ ++ E E E +L +G +++M+ ++ Sbjct: 198 IGYKFQLGFNELPEKEQESFREWMYDLLYQLYENE-ELYTKSL-YDGVGWTEEVMT-FLR 254 Query: 457 FVADRLLVELGYDRLW----NTPNPFDWMELISLQGKTNFFEKRVG 498 + A++ L+ LG D L+ N NP M IS + F +VG Sbjct: 255 YNANKALMNLGQDPLFPDSANDVNPI-VMNGISTGTSNHDFFSQVG 299
ref|YP_088160.1| NrdF protein [Mannheimia succiniciproducens MBEL55E] gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E] (376 aa) Score: 55 bits (132), Expect: 4.15301e-06 Length: 313, Idn/Pos/Gap = 71/125/55 (22%/39%/17%) Query: 215 KHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN 274 K+ + ++ ++ FW EE+D+A D + L E E++ L + D I + Sbjct: 33 KYETFEKLIEKQLSFFWRPEEVDVAQDRIDYA-ALPEHEKHIFISNLKYQTLLDSIQGRS 91 Query: 275 LAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVR 334 + V IPE + E IHS +Y+ +I V DP + +F + T + Sbjct: 92 PNVALLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIVNDP---SVVFDDIVTNEEII 148 Query: 335 RKA-----YW----------------AIRWIGSDASFQER---------LVAFAAVEGIF 364 ++A Y+ + G + R L++ A+E I Sbjct: 149 KRAKDISAYYDDLIRDSQLYNLFGEGTYKVEGKECKVTLRNLKKQLYLCLMSVNALEAIR 208 Query: 365 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMI 424 F SF F +R LM G + I+RDE LH H+ +++ A + P M Sbjct: 209 FYVSFACSFAFAERQLMEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDP-----EMA 263 Query: 425 RDAVECEKE----FVCDALPV-----------SLIGMNQQLMSAYIEFVADRLLVELGYD 469 A EC++E F+ A S+IG+N+ ++ Y+E++ + + +G Sbjct: 264 EIAEECKQEAYDLFLAAAEQEKAWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLP 323 Query: 470 RLWNT-PNPFDWM 481 + NP W+ Sbjct: 324 LPFQARSNPIPWI 336
ref|NP_267130.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis subsp. lactis Il1403] gb|AAK05072.1| ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1) [Lactococcus lactis subsp. lactis Il1403] pir||F86746 hypothetical protein nrdF [imported] - Lactococcus lactis subsp. lactis (strain IL1403) (325 aa) Score: 55 bits (132), Expect: 4.15301e-06 Length: 256, Idn/Pos/Gap = 54/119/13 (21%/46%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ + FW + ++ D+D WR +L + ER + A D + + AE D Sbjct: 30 WEKLTSQFWLDTRVPVSNDLDDWR-KLPQLERDTFAKAFAGLTLLDTLQSVDGAEVLKHD 88 Query: 283 VEIP-EARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAI 341 P E CF Q ME++H+++YS + + +E LF ++T ++ KA Sbjct: 89 ARTPQEIACFNNIQF-MESVHAKSYSTIFST-LNTKKEIEELFNWVDTNVYMQTKAEIIN 146 Query: 342 RWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 + S Q+++ + +F+SG + + +L ++ +LI RDE +H + Sbjct: 147 KIYESGTPLQKKVASVFLETCLFYSGFYTPLRYLGNNKMINSAEII-KLIIRDESVHGTY 205 Query: 402 ACHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + L +E+ + ++ ++ E E+++ L +G ++++ ++ Sbjct: 206 IGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKY--SHLLYDKVGWTDEVLT-FLR 262 Query: 457 FVADRLLVELGYDRLW 472 + A++ L+ LG D L+ Sbjct: 263 YNANKALMNLGQDPLF 278
gb|AAU23498.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus licheniformis ATCC 14580] ref|YP_091553.1| NrdF [Bacillus licheniformis ATCC 14580] ref|YP_079136.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus licheniformis ATCC 14580] gb|AAU40860.1| NrdF [Bacillus licheniformis DSM 13] (325 aa) Score: 55 bits (132), Expect: 4.43969e-06 Length: 311, Idn/Pos/Gap = 76/136/30 (24%/43%/9%) Query: 215 KHPKIFE--FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 KH F FY ++V FW EEI L D+ W+ L + E+ VLA D Sbjct: 12 KHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWK-YLGKNEQDTYMKVLAGLTLLDTEQG 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMEN-IHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 VE + + F MEN +H+++YS + + E +F ++ Sbjct: 71 NTGMPLVAEHVEGHQRKAVLNFMAMMENAVHAKSYSNIF-MTLAPTETINEVFEWVKQNK 129 Query: 332 CVRRKA------YWAIRWIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGL 384 +++KA Y IR G S + +VA +E +F+SG + +++ + LM Sbjct: 130 YLQKKAQIIVGLYEKIRQ-GDKISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSG 188 Query: 385 TFSNELISRDEGLHCDF----ACHLYSMLPAEERVPAERIHS----MIRDAVECEKEFVC 436 N LI RDE +H + A +Y+ E++ E +++ ++++ E E E+ Sbjct: 189 EIIN-LILRDEAIHGVYVGLLAQEIYNQQTPEKK---EELYAFSIDLLKELYENELEYTE 244 Query: 437 DALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFE 494 D +G++ + +I + A++ L+ LG++ + NP L + +FF Sbjct: 245 DLY--DQVGLSHDV-KKFIRYNANKALMNLGFEAYFEEEEINPIVLNGLNTKTKSHDFFS 301 Query: 495 KRVGEYQKANV 505 + Y+KA V Sbjct: 302 MKGNGYKKATV 312
ref|YP_040213.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus MRSA252] emb|CAG42473.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus MSSA476] emb|CAG39796.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus MRSA252] emb|CAC40668.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus aureus] emb|CAB38643.1| ribonucleotide reductase minor subunit [Staphylococcus aureus] ref|YP_185668.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus aureus subsp. aureus COL] dbj|BAB56894.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus Mu50] dbj|BAB94559.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus MW2] ref|NP_373942.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus N315] dbj|BAB41920.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus N315] ref|YP_042825.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus aureus subsp. aureus MSSA476] ref|NP_645511.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus MW2] pir||E89845 hypothetical protein nrdF [imported] - Staphylococcus aureus (strain N315) gb|AAW37849.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus aureus subsp. aureus COL] ref|NP_371256.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus aureus subsp. aureus Mu50] (323 aa) Score: 55 bits (132), Expect: 4.47689e-06 Length: 321, Idn/Pos/Gap = 73/139/40 (22%/43%/12%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFA------ASDGIVLENL 275 F++++++ W E ++ D+ W+ L+EAE+ LA A DG+ L L Sbjct: 16 FWRQNISQMWVETEFKVSKDIASWKT-LSEAEQDTFKKALAGLTGLDTHQADDGMPLVML 74 Query: 276 AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRR 335 +R + Y F ME IH+++YS + + E L + P ++ Sbjct: 75 HTTDLRK------KAVYSFMAMMEQIHAKSYSHIFTTLLPSSETNYLLDEWVLEEPHLKY 128 Query: 336 K-----AYWAIRWIGSDAS----FQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 K A + W G +AS + R+ + +FFSG + ++ L +G M T Sbjct: 129 KSDKIVANYHKLW-GKEASIYDQYMARVTSVFLETFLFFSGFYYPLY-LAGQGKM---TT 183 Query: 387 SNELISR---DEGLHCDF----ACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDA 438 S E+I + DE +H F A HL + L E+ A++ ++ ++ D E+ + Sbjct: 184 SGEIIRKILLDESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYT--K 241 Query: 439 LPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFEKR 496 + +G+ + +++ Y+++ ++ L LG++ + NP L + +FF + Sbjct: 242 MLYDDLGITEDVLN-YVKYNGNKALSNLGFEPYFEEREFNPIIENALDTTTKNHDFFSVK 300 Query: 497 VGEYQKANVTTSATDNVFALD 517 Y A + D+ F D Sbjct: 301 GDGYVLALNVEALQDDDFVFD 321
ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5] gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5] pir||A70431 ribonucleotide reductase beta chain - Aquifex aeolicus sp|O67475|RIR2_AQUAE Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) [Contains: Aae nrdB intein (Aae RIR2 intein)] (696 aa) Score: 55 bits (131), Expect: 5.65507e-06 Length: 204, Idn/Pos/Gap = 49/89/11 (24%/43%/5%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYK-RHVASFWTAEEIDLAADMDHWRNRLTEAERYFVS 258 I K + + L IK+ F+ YK +FW EEI + D + L++ E+ Sbjct: 28 IIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETVLSDYEKRAYE 87 Query: 259 HVLAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE 318 VL+F A D ++ L E F R + PE Q E++H+ +Y ++++ V DP Sbjct: 88 LVLSFLIALDSFQVDMLKE-FGRMITAPEVEMAITAQEFQESVHAYSYQFILESVV-DPV 145 Query: 319 ERTHLF-------RAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCA 371 + ++ R +E + IR ++ +F + + +E ++F F Sbjct: 146 KADEIYNYWREDERLLERNKVIAELYNEFIR-KPNEENFIKATIGNYILESLYFYSGFAF 204 Query: 372 IFWLKKRGLMPGLTFSNELISRDE 395 + L ++G M + I+RDE Sbjct: 205 FYTLGRQGKMRNTVQQIKYINRDE 228
gb|AAN58401.1| putative ribonucleotide reductase, small subunit [Streptococcus mutans UA159] ref|NP_721095.1| putative ribonucleotide reductase, small subunit [Streptococcus mutans UA159] (319 aa) Score: 54 bits (130), Expect: 6.04543e-06 Length: 286, Idn/Pos/Gap = 68/127/18 (23%/44%/6%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I L+ D+D WR +L+ AE+ V V D + ++ E D Sbjct: 22 WEKLTEQFWLDTRIPLSNDLDDWR-KLSAAEKDLVGKVFGGLTLLDTMQSQSGVEAIRGD 80 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V P ME++H+++YS + + E +F +++KA I Sbjct: 81 VRTPHEEAVLNNIQFMESVHAKSYSSIFST-LNTKSEIEGIFEWTNNNEYLQKKAK-IIN 138 Query: 343 WIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 I + + ++ VA +E +F+SG F +++L L + +LI RDE +H + Sbjct: 139 EIYENGNALQKKVASTFLETFLFYSGFFTPLYYLGNNKL-ANVAEIIKLIIRDESVHGTY 197 Query: 402 ACHLYSM----LPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + L EE+ + ++ ++ E E E L +G +++M+ ++ Sbjct: 198 IGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENE-ELYTQTL-YDPVGWTEEVMT-FLR 254 Query: 457 FVADRLLVELGYDRLW----NTPNPFDWMELISLQGKTNFFEKRVG 498 + A++ L+ LG D L+ N NP M IS + F +VG Sbjct: 255 YNANKALMNLGQDPLFPDTANDVNPI-VMNGISTGTSNHDFFSQVG 299
ref|YP_217729.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gb|AAX66648.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] (319 aa) Score: 54 bits (130), Expect: 6.62655e-06 Length: 270, Idn/Pos/Gap = 66/113/23 (24%/41%/8%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R ++FW E++ L+ D+ W+ L+ AE+ V D I Sbjct: 14 IQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LSAAEQQLTIRVFTGLTLLDTIQNI 72 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A M D P ME +H+ +YS + + +E + E P + Sbjct: 73 AGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQT-KEVDAAYAWSEENPPL 131 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWL----KKRGLMPGLTFSNE 389 +RKA + SD ++++ + +F+SG FWL RG + Sbjct: 132 QRKAQIILAHYVSDEPLKKKIASVFLESFLFYSG-----FWLPMYFSSRGKLTNTADLIR 186 Query: 390 LISRDEGLHCDFACHLYSM----LPAEERVPAERIHSMIRDAV-ECEKEFVC--DALPVS 442 LI RDE +H + + Y + L A ER E + D + E +C +AL Sbjct: 187 LIIRDEAVHGYYIGYKYQIALQKLSAIER---EELKLFALDLLMELYDNEICYTEALYAE 243 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 +N + A++ + A++ L+ LGY+ L+ Sbjct: 244 TGWVND--VKAFLCYNANKALMNLGYEALF 271
ref|YP_120511.1| putative ribonucleoside-diphosphate reductase beta subunit [Nocardia farcinica IFM 10152] dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit [Nocardia farcinica IFM 10152] (320 aa) Score: 54 bits (130), Expect: 7.02511e-06 Length: 258, Idn/Pos/Gap = 57/107/13 (22%/41%/5%) Query: 221 EFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFM 280 E + R +FW E++ ++ D+ W N LT E+ V D I A + Sbjct: 22 EVWARLTGNFWLPEKVPVSNDIPSW-NTLTPHEQQLTMRVFTGLTLLDTIQGTVGAVSLI 80 Query: 281 RDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWA 340 D P ME++H+++YS + +E FR E ++RKA Sbjct: 81 PDALTPHEEAVLTNIAFMESVHAKSYSSIFSTLCST-KEIDEAFRWSEENRNLQRKAEIV 139 Query: 341 IRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 + + D + ++ + +F+SG + + W R + LI RDE +H Sbjct: 140 LDYYQGDDPLKRKVASTLLESFLFYSGFYLPMHW-SSRAKLTNTADMIRLIIRDEAVHGY 198 Query: 401 FACHLYSMLPAEERVPAER------IHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAY 454 + + Y E+ AER ++ + E E E+ D +G+ + + + + Sbjct: 199 YIGYKYQR-GLEQVSEAEREELKNYTFELLYELYENEVEYTQDLY--DEVGLTEDVKT-F 254 Query: 455 IEFVADRLLVELGYDRLW 472 + + A++ L+ LGY+ L+ Sbjct: 255 LRYNANKALMNLGYEGLF 272
gb|AAP56395.1| NrdF [Mycoplasma gallisepticum R] ref|NP_852827.1| NrdF [Mycoplasma gallisepticum R] gb|AAD45275.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma gallisepticum] sp|Q9XC20|RIR2_MYCGA Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (339 aa) Score: 53 bits (128), Expect: 1.03983e-05 Length: 235, Idn/Pos/Gap = 54/103/24 (22%/43%/10%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I PK E + R +FW E+I ++ D+ W N LT + V+ G+ L Sbjct: 34 INDPKDLEVWTRVTQNFWLPEKIPVSNDLKSW-NELTPEWKQLVTRTFT------GLTLL 86 Query: 274 NLAERFMRDV-EIP------EARCFYGFQIAMENIHSETYSLLIDAY-VKDPEERTHLFR 325 + + + D+ +IP E + F M +H+ +Y + D E H + Sbjct: 87 DTIQCTLGDIAQIPNSLTDHEQFVYANFSF-MVGVHARSYGTIFSTLNTSDEIEEAHEWV 145 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 ++ +A + + + SD + ++ A A + G G F F+L RG +P + Sbjct: 146 INNEK--LQARAKFLVPYYTSDDPLKSKIAA-ALMPGFLLYGGFYLPFYLAARGKLPNTS 202 Query: 386 FSNELISRDEGLHCDFACHLYSM----LPAEERVPAER-IHSMIRDAVECEKEFV 435 LI RD+ +H ++ + Y + LP E++ ++ + ++ +E EK+F+ Sbjct: 203 DIIRLILRDKVIHNYYSGYKYRLKVQKLPKEKQEEYKKFVFEILYKLIELEKDFL 257
ref|YP_051427.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia carotovora subsp. atroseptica SCRI1043] emb|CAG76236.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia carotovora subsp. atroseptica SCRI1043] (320 aa) Score: 53 bits (127), Expect: 1.45181e-05 Length: 264, Idn/Pos/Gap = 56/106/11 (21%/40%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R ++FW E++ L+ D+ W + L ER V D I Sbjct: 15 IEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW-STLNTRERQLTIRVFTGLTLLDTIQNT 73 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A M D P ME +H+ +YS + E +R E P + Sbjct: 74 LGAPTLMPDAVTPHEEAVLSNISFMEAVHARSYSSIFSTLCLT-SEVDDAYRWSEENPAL 132 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 ++K+ + SD +++ + +F+SG + ++W R + LI R Sbjct: 133 QKKSDIILSHYRSDDPLMKKVASVFLESFLFYSGFYLPMYW-SSRAKLTNTADLIRLIIR 191 Query: 394 DEGLH-----CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H F L PA ++ + +++D + E + + +G + Sbjct: 192 DEAVHGYYIGYKFQRALAKADPARQQQVKNFAYDLLQDLYDNEVLYTQELY--DGVGWTE 249 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ + A++ L+ LGY+ L+ Sbjct: 250 DV-KKFLHYNANKALMNLGYEALF 272
ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] (325 aa) Score: 53 bits (127), Expect: 1.52634e-05 Length: 328, Idn/Pos/Gap = 76/138/37 (23%/42%/11%) Query: 208 RYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAAS 267 R + P ++P++ EF S+W E + D+ ++R + + ER+ ++ + + Sbjct: 9 RLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQNYRIDINDHERHVLTRAMLAISQV 68 Query: 268 DGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLID--------AYVKDPEE 319 + V E + R PE G E H + YS L++ + ++D E Sbjct: 69 EVNVKRFWGELY-RYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGLNEMFSQIQDIEP 127 Query: 320 RTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAA-VEGIFFSGSFCAIFWLKK- 377 + R ME+ ++ K F LV F+ VE I G F + K Sbjct: 128 LMNRIRYMESF--MKDKD-------AGKGEFVLSLVLFSLFVEHISLFGQFLIMMSFNKH 178 Query: 378 RGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEER---VPA--ERIHSMIRDAVECE- 431 + L G++ + E S++E +H F LY +L E P E + ++ A E E Sbjct: 179 KNLFKGISNAVEATSKEEEIHGKFGIALYEILREEHSELFTPEFFEDLKTLSSQAFEAEC 238 Query: 432 --KEFVCDALPVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNP-----FDWMELI 484 +++ + +S I +++ + YI + L+ LG + ++ NP +W ++ Sbjct: 239 GILDWIFEEGDLSFI--SREEVENYIRSRYNNSLMTLGLEPPYDV-NPELLKETEWFDIE 295 Query: 485 SLQGK-TNFFEKRVGEYQKANVTTSATD 511 L K T+FF KR +Y K +A D Sbjct: 296 ILSTKETDFFNKRSTDYSKKMKQITADD 323
emb|CAD63296.1| ribonucleoside-diphosphate reductase, beta chain [Lactobacillus plantarum WCFS1] ref|NP_784453.1| ribonucleoside-diphosphate reductase, beta chain [Lactobacillus plantarum WCFS1] (336 aa) Score: 53 bits (127), Expect: 1.52634e-05 Length: 260, Idn/Pos/Gap = 57/121/19 (21%/46%/7%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I ++ DM WR L + R+ V HV D + ++ + R+ Sbjct: 34 WEKLTEQFWLDTRIPVSNDMADWR-ELDDDHRWVVGHVFGGLTLLDTLQSQDGLQALRRN 92 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 V ME++H+++YS + + + P+E +F ++ ++ KA W + Sbjct: 93 VLTSHETAVLNNIQFMESVHAKSYSTIFET-LNTPDEINEIFDWSDSEEFLQAKAQWIYK 151 Query: 343 WIGS-DASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 + D ++ VA +E +F+SG + +++L L P + +LI RDE +H Sbjct: 152 LYDNIDEDPLKQKVANVFLETFLFYSGFYTPLYYLGHNQL-PNVAEIIKLILRDESVHGT 210 Query: 401 FACHLYSMLPAEERVPAERIHSMIRDAV--------ECEKEFVCDALPVSLIGMNQQLMS 452 + + + L ++R +E+ + +D + E E+ ++ L IG + ++++ Sbjct: 211 YIGYKFQ-LGFKDR--SEKQQAEFKDWMFDFLYKLYENEENYI--HLVYDQIGWSDEVLT 265 Query: 453 AYIEFVADRLLVELGYDRLW 472 + + A++ L+ LG D L+ Sbjct: 266 -FSRYNANKALMNLGQDALF 284
emb|CAA51695.1| ribonucleoside-diphosphate reductase [Salmonella typhimurium] gb|AAL21693.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella typhimurium LT2] pir||S34272 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella typhimurium ref|NP_461734.1| ribonucleoside-diphosphate reductase 2 beta subunit [Salmonella typhimurium LT2] sp|P17424|RIR4_SALTY Ribonucleoside-diphosphate reductase 2 beta subunit (Ribonucleotide reductase 2) (R2F protein) pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella Typhimurium (Oxidized) pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella Typhimurium (Oxidized) pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella Typhimurium pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella Typhimurium (319 aa) Score: 53 bits (127), Expect: 1.71547e-05 Length: 268, Idn/Pos/Gap = 63/113/19 (23%/42%/7%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R ++FW E++ L+ D+ W+ L+ AE+ V D I Sbjct: 14 IQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LSAAEQQLTIRVFTGLTLLDTIQNI 72 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A M D P ME +H+ +YS + + +E + E P + Sbjct: 73 AGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQT-KEVDAAYAWSEENPPL 131 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWL----KKRGLMPGLTFSNE 389 +RKA + SD ++++ + +F+SG FWL RG + Sbjct: 132 QRKAQIILAHYVSDEPLKKKIASVFLESFLFYSG-----FWLPMYFSSRGKLTNTADLIR 186 Query: 390 LISRDEGLHCDFACHLYSM----LPAEERVPAERIH-SMIRDAVECEKEFVCDALPVSLI 444 LI RDE +H + + Y + L A ER + ++ + + E + +AL Sbjct: 187 LIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYT-EALYAETG 245 Query: 445 GMNQQLMSAYIEFVADRLLVELGYDRLW 472 +N + A++ + A++ L+ LGY+ L+ Sbjct: 246 WVND--VKAFLCYNANKALMNLGYEALF 271
ref|NP_806412.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Typhi Ty2] ref|NP_457207.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Typhi str. CT18] emb|CAD05919.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Typhi] gb|AAO70272.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella enterica subsp. enterica serovar Typhi Ty2] pir||AH0841 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) (319 aa) Score: 52 bits (125), Expect: 2.66954e-05 Length: 270, Idn/Pos/Gap = 65/113/23 (24%/41%/8%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R ++FW E++ L+ D+ W+ L+ AE+ V D I Sbjct: 14 IQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LSAAEQQLTIRVFTGLTLLDTIQNI 72 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A M D P ME +H+ +YS + + +E + E P + Sbjct: 73 AGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQT-KEVDAAYAWSEENPPL 131 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWL----KKRGLMPGLTFSNE 389 +RKA + SD ++++ + +F+SG FWL RG + Sbjct: 132 QRKAQIILAHYVSDEPLKKKIASVFLESFLFYSG-----FWLPMYFSSRGKLTNTADLIR 186 Query: 390 LISRDEGLHCDFACHLYSM----LPAEERVPAERIHSMIRDAV-ECEKEFVC--DALPVS 442 LI RDE +H + + + + L A ER E + D + E +C +AL Sbjct: 187 LIIRDEAVHGYYIGYKHQIALQKLSAIER---EELKLFALDLLMELYDNEICYTEALYAE 243 Query: 443 LIGMNQQLMSAYIEFVADRLLVELGYDRLW 472 +N + A++ + A++ L+ LGY+ L+ Sbjct: 244 TGWVND--VKAFLCYNANKALMNLGYEALF 271
emb|CAB13623.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus subtilis subsp. subtilis str. 168] ref|NP_389621.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus subtilis subsp. subtilis str. 168] emb|CAA92811.1| NrdF [Bacillus subtilis] pir||C69667 ribonucleoside-diphosphate reductase (minor subunit) nrdF - Bacillus subtilis sp|P50621|RIR2_BACSU Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (329 aa) Score: 52 bits (125), Expect: 2.71446e-05 Length: 320, Idn/Pos/Gap = 76/135/24 (23%/42%/7%) Query: 215 KHPKIFE--FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 KH F FY ++V FW EEI L D+ W+ L + E+ VLA D Sbjct: 12 KHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWK-YLGKNEQDTYMKVLAGLTLLDTEQG 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMEN-IHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 V+ + + F MEN +H+++YS + + E +F ++ Sbjct: 71 NTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIF-MTLAPTETINEVFEWVKQNK 129 Query: 332 CVRRKA------YWAIRWIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGL 384 +++KA Y AI+ + S + +VA +E +F+SG + +++ + LM Sbjct: 130 YLQKKAQMIVGLYKAIQ-KDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSG 188 Query: 385 TFSNELISRDEGLHCDF----ACHLYSMLPAEERVPAERIH-SMIRDAVECEKEFVCDAL 439 N LI RDE +H + A +Y+ E++ ++ E E E+ D Sbjct: 189 EIIN-LILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLY 247 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTP--NPFDWMELISLQGKTNFFEKRV 497 +G++ + +I + A++ L+ LG+D + NP L + +FF + Sbjct: 248 --DQVGLSHDV-KKFIRYNANKALMNLGFDPYFEEEDINPIVLNGLNTKTKSHDFFSMKG 304 Query: 498 GEYQKANVTTSATDNVFALD 517 Y+KA V D+ + D Sbjct: 305 NGYKKATVEPLKDDDFYFED 324
ref|ZP_00322768.1| COG0208: Ribonucleotide reductase, beta subunit [Pediococcus pentosaceus ATCC 25745] (317 aa) Score: 52 bits (125), Expect: 2.78326e-05 Length: 300, Idn/Pos/Gap = 58/128/16 (19%/42%/5%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMRD 282 +++ FW I ++ D+ WR L E ++ V HV D + ++ +D Sbjct: 21 WEKLTEQFWLDTRIPISNDLSDWR-ELDEDHKWVVGHVFGGLTLLDTLQSQDGMAALRKD 79 Query: 283 VEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAIR 342 + P ME++H+++YS + + + P E +F ++ ++ K Sbjct: 80 IRTPHETAVLNNIQFMESVHAKSYSSIFET-LNTPSEIDEIFAWSDSEEFLQNKTKRIYE 138 Query: 343 WIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH--- 398 D ++ ++ +E +F+SG F +++L L + +LI RDE +H Sbjct: 139 LYHDDEHPLKKKISSVFLETFLFYSGFFTPLYYLGHNQL-NNVAEIIKLILRDESVHGTY 197 Query: 399 --CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 F L + E++ + +++ + D + E+++V +G ++++ + Sbjct: 198 IGYKFQLGLKELGENEQQEIKDWMYNFLYDLYDNEEKYVHTLY--DQVGWTDEVLT-FTR 254 Query: 457 FVADRLLVELGYDRLWNTP----NPFDWMELISLQGKTNFFEKRVGEYQKANVTTSATDN 512 + A++ L+ LG D L+ NP + + +FF + Y+ NV T + ++ Sbjct: 255 YNANKALMNLGQDPLFPDTEADVNPIVMNGISTGTSNHDFFSQVGNGYRLGNVETMSDED 314
ref|NP_541907.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Brucella melitensis 16M] gb|AAL54171.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Brucella melitensis 16M] pir||AH3625 ribonucleoside-diphosphate reductase (EC 1.17.4.1) [imported] - Brucella melitensis (strain 16M) (335 aa) Score: 52 bits (124), Expect: 3.00032e-05 Length: 264, Idn/Pos/Gap = 55/107/11 (20%/40%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R +FW E++ L+ D+ W L E+ + V D I Sbjct: 30 IEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET-LKPQEKQLTTRVFTGLTLLDTIQNA 88 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + M D P ME +H+ +YS + P+ +R E + Sbjct: 89 VGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDV-DDAYRWSEENEFL 147 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RK+ + +D ++++ + +F+SG + ++W R + LI R Sbjct: 148 QRKSTLILDQYHADDPLKKKIASVFLESFLFYSGFYLPMYW-SSRAKLTNTADLIRLIIR 206 Query: 394 DEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL-----IGMNQ 448 DE +H + Y A E + E+ + A E E + + + +G+ + Sbjct: 207 DEAVHGYYIG--YKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGLTE 264 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ + A++ L+ LGY+ L+ Sbjct: 265 DV-KKFLHYNANKALMNLGYEALF 287
ref|NP_353105.1| hypothetical protein AGR_C_107 [Agrobacterium tumefaciens str. C58] gb|AAK85890.1| AGR_C_107p [Agrobacterium tumefaciens str. C58] pir||A97367 probable nrdG protein [imported] - Agrobacterium tumefaciens (strain C58, Cereon) (329 aa) Score: 52 bits (124), Expect: 3.02546e-05 Length: 264, Idn/Pos/Gap = 56/108/11 (21%/40%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R ++FW E++ L+ D+ W L E+ V D I Sbjct: 24 IEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW-GTLKPEEQELTIRVFTGLTLLDTIQNG 82 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A R M D P ME +H+ +YS + P+ +R E + Sbjct: 83 VGAVRLMPDSATPHEEAVLSNISFMEAVHARSYSSIFSTLCSTPDV-DDAYRWSEENEFL 141 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RK+ +R S ++++ + +F+SG + +FW R + LI R Sbjct: 142 QRKSAIIMREYDSGDPLKKKIASVFLESFLFYSGFYLPMFW-SSRAKLTNTADLIRLIIR 200 Query: 394 DEGLH-----CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H F L + A+ + + ++ + + E ++ D +G+ + Sbjct: 201 DEAVHGYYIGYKFQRALDRLGEAQRQEIKDFAFDLLLELYDNEAKYTEDLY--DGVGLTE 258 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ + A++ L+ LGY+ L+ Sbjct: 259 DV-KQFLHYNANKALMNLGYEALF 281
ref|NP_530780.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium tumefaciens str. C58] gb|AAL41096.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium tumefaciens str. C58] pir||AB2585 hypothetical protein nrdF [imported] - Agrobacterium tumefaciens (strain C58, Dupont) (324 aa) Score: 52 bits (124), Expect: 3.63505e-05 Length: 264, Idn/Pos/Gap = 56/108/11 (21%/40%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R ++FW E++ L+ D+ W L E+ V D I Sbjct: 19 IEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW-GTLKPEEQELTIRVFTGLTLLDTIQNG 77 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A R M D P ME +H+ +YS + P+ +R E + Sbjct: 78 VGAVRLMPDSATPHEEAVLSNISFMEAVHARSYSSIFSTLCSTPDV-DDAYRWSEENEFL 136 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RK+ +R S ++++ + +F+SG + +FW R + LI R Sbjct: 137 QRKSAIIMREYDSGDPLKKKIASVFLESFLFYSGFYLPMFW-SSRAKLTNTADLIRLIIR 195 Query: 394 DEGLH-----CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H F L + A+ + + ++ + + E ++ D +G+ + Sbjct: 196 DEAVHGYYIGYKFQRALDRLGEAQRQEIKDFAFDLLLELYDNEAKYTEDLY--DGVGLTE 253 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ + A++ L+ LGY+ L+ Sbjct: 254 DV-KQFLHYNANKALMNLGYEALF 276
ref|NP_950307.1| ribonucleotide reductase beta subunit [Onion yellows phytoplasma OY-M] dbj|BAD04140.1| ribonucleotide reductase beta subunit [Onion yellows phytoplasma OY-M] (350 aa) Score: 51 bits (123), Expect: 4.51571e-05 Length: 300, Idn/Pos/Gap = 66/135/46 (22%/45%/15%) Query: 207 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSH---VLAF 263 D+YT F FY+++++ FW E+I L D+ W + LT E+ S VL F Sbjct: 26 DKYTHF---------FYEQNLSQFWRPEDISLQGDLAAW-SELTLEEKTAYSRNLLVLTF 75 Query: 264 FAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMEN-IHSETYSLLIDAYVKDPEERTH 322 G + + R + + E + + F AMEN +H+++YS + +Y+ + +E Sbjct: 76 LDTYQGDLGMPVIARSLEEHE-HQKKATLNFMGAMENAVHAKSYSNIFMSYLTN-KEINQ 133 Query: 323 LF------RAMETMPCVRRKAYWAIR---WIGSDASFQERLVAFAAVE------------ 361 LF +++TM V K Y A+ ++ +S Q + F + Sbjct: 134 LFLWGNQQTSLQTMMQVIVKVYEALEDQIYLKKQSSLQFSELEFKKTQWQAMAVSVFLET 193 Query: 362 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF----ACHLYSMLPAEERVPA 417 +F+SG + ++++ + LM N LI RDE +H + A +Y + ++ Sbjct: 194 WLFYSGFYYSLYFYGQGKLMQSGEIIN-LIIRDESIHGVYVGRLATEIYQLF---DKPTQ 249 Query: 418 ERIHSMIRDAVECEKEFVCDALPVSLIGMN-QQLMSAYIEFVADRLLVELGYDRLWNTPN 476 + + + + D ++ + + +N + ++ ++ + A++ L+ LG+D + + N Sbjct: 250 QTLKTWLDDLMQQLYQAQTSLVHAIYHKLNLEDDVNKFVRYNANKALMNLGFDAFFPSEN 309
ref|YP_177921.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium tuberculosis H37Rv] ref|NP_856719.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium bovis AF2122/97] emb|CAE55544.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium tuberculosis H37Rv] emb|CAD96761.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium bovis AF2122/97] gb|AAK47464.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Mycobacterium tuberculosis CDC1551] ref|NP_337650.1| ribonucleoside-diphosphate reductase R2-2, beta subunit [Mycobacterium tuberculosis CDC1551] gb|AAB81406.1| ribonucleotide reductase R2-2 small subunit [Mycobacterium tuberculosis] pir||C70861 probable nrdG protein - Mycobacterium tuberculosis (strain H37RV) (324 aa) Score: 51 bits (122), Expect: 5.11777e-05 Length: 257, Idn/Pos/Gap = 52/107/11 (20%/41%/4%) Query: 221 EFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFM 280 E + R +FW E++ ++ D+ W LT E+ V D I A + Sbjct: 26 EVWDRLTGNFWLPEKVPVSNDIPSW-GTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLI 84 Query: 281 RDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWA 340 D P ME++H+++YS + E FR E ++RKA Sbjct: 85 PDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAE-IDDAFRWSEENRNLQRKAEIV 143 Query: 341 IRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 +++ D + ++ + +F+SG + ++W R + LI RDE +H Sbjct: 144 LQYYRGDEPLKRKVASTLLESFLFYSGFYLPMYW-SSRAKLTNTADMIRLIIRDEAVHGY 202 Query: 401 FACHLYS--MLPAEERVPAE---RIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 + + + + ++ AE + ++ + + E E+ D +G+ + + ++ Sbjct: 203 YIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLY--DEVGLTEDV-KKFL 259 Query: 456 EFVADRLLVELGYDRLW 472 + A++ L+ LGY+ L+ Sbjct: 260 RYNANKALMNLGYEALF 276
ref|NP_737489.1| putative ribonucleotide reductase [Corynebacterium efficiens YS-314] dbj|BAC17689.1| putative ribonucleotide reductase [Corynebacterium efficiens YS-314] (339 aa) Score: 51 bits (121), Expect: 7.08602e-05 Length: 311, Idn/Pos/Gap = 66/130/33 (21%/41%/10%) Query: 221 EFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFM 280 + + R +FW E+I ++ D+ W N ++EAE LA G+ L + + + Sbjct: 40 DIWNRLTTNFWLPEKIPVSNDIQKW-NSMSEAEH------LATLRVFTGLTLLDTIQGTV 92 Query: 281 RDVE-IPEARCFYGFQIA-----MENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVR 334 V IP+A + + ME++H+++YS + P E FR ++ Sbjct: 93 GAVSMIPDATTHHEEAVLTNISFMESVHAKSYSNIFMTLASTP-EINEAFRWSRHNEHLQ 151 Query: 335 RKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 394 KA + + D++ + +A +E + F F + G + LI RD Sbjct: 152 YKAKRILDYYQQDSTPARKKIASVMLESLLFYSGFYLPLRMASIGKLTNTADVIRLIIRD 211 Query: 395 EGLH-----CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEF---VCDALPVSLIGM 446 E +H + H+ ++ P ++ + ++ D + E E+ V D L S Sbjct: 212 EAIHGYYIGYKYQKHIATLSPEKQATNHDEAVELLLDLYDNELEYTRHVYDDLGWS---- 267 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLWNTPN-PFDWMELISLQGKTN----FFEKRVGEYQ 501 + +SA++ + A++ + LGY+ ++ FD + SL +N FF Y Sbjct: 268 --EDVSAFLRYNANKAMQNLGYESIFPVDQCKFDPGVMTSLDPSSNENHDFFSGSGSSYV 325 Query: 502 KANVTTSATDN 512 +V ++ ++ Sbjct: 326 IGDVEATSDED 336
ref|YP_223616.1| NrdF, ribonucleoside-diphosphate reductase, beta subunit [Brucella abortus biovar 1 str. 9-941] gb|AAX76255.1| NrdF, ribonucleoside-diphosphate reductase, beta subunit [Brucella abortus biovar 1 str. 9-941] gb|AAN33517.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella suis 1330] ref|NP_699512.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella suis 1330] (329 aa) Score: 51 bits (121), Expect: 7.32651e-05 Length: 264, Idn/Pos/Gap = 55/106/11 (20%/40%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R +FW E++ L+ D+ W L E+ V D I Sbjct: 24 IEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET-LKPQEKQLTIRVFTGLTLLDTIQNA 82 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + M D P ME +H+ +YS + P+ +R E + Sbjct: 83 VGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDV-DDAYRWSEENEFL 141 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RK+ + +D ++++ + +F+SG + ++W R + LI R Sbjct: 142 QRKSTLILDQYHADDPLKKKIASVFLESFLFYSGFYLPMYW-SSRAKLTNTADLIRLIIR 200 Query: 394 DEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL-----IGMNQ 448 DE +H + Y A E + E+ + A E E + + + +G+ + Sbjct: 201 DEAVHGYYIG--YKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRYTEALYDGVGLTE 258 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ + A++ L+ LGY+ L+ Sbjct: 259 DV-KKFLHYNANKALMNLGYEALF 281
ref|NP_739029.1| ribonucleotide reductase beta chain [Corynebacterium efficiens YS-314] dbj|BAC19229.1| ribonucleotide reductase beta chain [Corynebacterium efficiens YS-314] (334 aa) Score: 51 bits (121), Expect: 8.03077e-05 Length: 264, Idn/Pos/Gap = 55/104/11 (20%/39%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R +FW E+I ++ D+ W LT+ E+ V D I Sbjct: 29 IPDDKDLEVWDRLTGNFWLPEKIPVSNDIKSW-GTLTDKEKQATMRVFTGLTLLDTIQGT 87 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + D E ME++H+++YS + P+ FR E + Sbjct: 88 VGAVSLLPDAESLHEEAVLTNIAFMESVHAKSYSNIFMTLASTPQ-INDAFRWSEENEAL 146 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RKA + + + + ++ + +F+SG + ++W + LI R Sbjct: 147 QRKAKIILAYYEGEDPLKRKIASVILESFLFYSGFYLPMYW-SSHAKLTNTADVIRLIIR 205 Query: 394 DEGLHCDFACHLYSMLPAEERVP-----AERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H + + Y A E E ++ D E E ++ D +G + Sbjct: 206 DEAVHGYYVGYKYQKALARESAQRQEELKEYAFDLLYDLYENETQYTEDLY--DELGWTE 263 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ + A++ + LGY+ L+ Sbjct: 264 DV-KRFLRYNANKAMNNLGYEGLF 286
gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Bacteriophage KVP40] ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Bacteriophage KVP40] (374 aa) Score: 50 bits (120), Expect: 9.89346e-05 Length: 320, Idn/Pos/Gap = 72/127/54 (22%/39%/16%) Query: 200 IFKAEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADM-------DHWRNRLTEA 252 +F E+ + +KH + ++ ++ FW EE+DL D +HW++ T+ Sbjct: 18 LFLGEDPNISRFETVKHGVFEQLTEKQLSFFWRPEEVDLTLDSQEFDRMPEHWKHVFTQN 77 Query: 253 ERY--FVSHV------LAFFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSE 304 +Y + V +AF I +N E ++ + E + M N++S Sbjct: 78 LKYQSLLDSVQGRAPNIAFLP----ICSDNSLENWITTWDFSETIHSRSYTHIMRNLYSN 133 Query: 305 TYSLLIDAYVKDP----------EERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERL 354 S + D V D E L + + ++ + +++ +E L Sbjct: 134 P-SAVFDEIVLDKSIMARAEAVTEHYDKLIAETQKLNQLKTMNLDEAHILMQESAVKEAL 192 Query: 355 V----AFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLP 410 A A+E I F SF F ++G+M G +LI+RDE LH L S+ Sbjct: 193 YLCMHAVNALEAIRFYVSFACTFNFAEQGIMEGNAKVMKLIARDEQLHLKGTQALISIWQ 252 Query: 411 AEERVP------------AERIHSMIRDAVECEKEFVCDALPVSLI-GMNQQLMSAYIEF 457 + P AE+I + D EKE+ + G+N Q++ Y+E+ Sbjct: 253 NYKDDPEMAEISLRLQPEAEKIFMQVVDQ---EKEWAHSLFSQGTVPGLNAQILCEYVEY 309 Query: 458 VADRLLVELGYDRLWNTPNP 477 +AD + +G N+P P Sbjct: 310 LADSRMRSVGL----NSPYP 325
ref|YP_177853.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium tuberculosis H37Rv] emb|CAE55444.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium tuberculosis H37Rv] gb|AAK46308.1| ribonucleoside-diphosphate reductase R2-1, beta subunit [Mycobacterium tuberculosis CDC1551] ref|NP_336494.1| ribonucleoside-diphosphate reductase R2-1, beta subunit [Mycobacterium tuberculosis CDC1551] pir||C70756 probable nrdF protein - Mycobacterium tuberculosis (strain H37RV) sp|Q10840|RIR2_MYCTU Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide reductase small subunit) (322 aa) Score: 50 bits (120), Expect: 0.000101442 Length: 260, Idn/Pos/Gap = 53/104/19 (20%/40%/7%) Query: 218 KIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 K + ++R +FW E+I L+ D+ W+ L+ E+ V D A Sbjct: 21 KDLQVWERLTGNFWLPEKIPLSNDLASWQT-LSSTEQQTTIRVFTGLTLLDTAQATVGAV 79 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + D P ME++H+++YS + ++ F E P ++RKA Sbjct: 80 AMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST-KQIDDAFDWSEQNPYLQRKA 138 Query: 338 YWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGL 397 + + D + + + + +F+SG + ++W RG + LI RDE + Sbjct: 139 QIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYW-SSRGKLTNTADLIRLIIRDEAV 197 Query: 398 H---CDFACH--LYSMLPAE----ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 H + C L + AE E +H++ + ++ + + +G Sbjct: 198 HGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLYDE------LGWTD 251 Query: 449 QLMSAYIEFVADRLLVELGY 468 ++ Y+ + A++ L LGY Sbjct: 252 DVL-PYMRYNANKALANLGY 270
ref|NP_343843.1| Ribonuleotide reductase small subunit, probable (nrdB) [Sulfolobus solfataricus P2] gb|AAK42633.1| Ribonuleotide reductase small subunit, probable (nrdB) [Sulfolobus solfataricus P2] pir||B90422 hypothetical protein nrdB [imported] - Sulfolobus solfataricus (308 aa) Score: 50 bits (120), Expect: 0.000105764 Length: 223, Idn/Pos/Gap = 58/94/37 (26%/42%/16%) Query: 209 YTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASD 268 ++LFP+K Y+ FW IDL+ D + W+ +L + E+ F+ +V + FAA + Sbjct: 23 WSLFPMK------LYQLGKKLFWDPANIDLSKDAEDWK-KLNDLEKMFIINVGSKFAAGE 75 Query: 269 GIV---LENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLID---------AYVKD 316 V L L +++ + E F + E+ H E + D AY KD Sbjct: 76 EAVALDLHPLIVTLVKEGRVEEVMYLEQF-VYEESKHVEAFRRFFDIVNVMEDLSAYTKD 134 Query: 317 --PEERTHLFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAA----VEGIFFSGSFC 370 P + + E +P KA W + D S + ++ A VEG+ G + Sbjct: 135 LSPNYKKIFY---EELP----KAMWNL---SRDPSPENQVRAVVTYNLIVEGVAAEGGYN 184 Query: 371 AIFWLKK-RGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAE 412 + R ++PGL LI+ DE H F +L + L E Sbjct: 185 IFRQITNTRKILPGLAKMVNLIATDESRHIAFGIYLITRLVKE 227
ref|NP_855653.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium bovis AF2122/97] emb|CAD94705.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) [Mycobacterium bovis AF2122/97] (322 aa) Score: 50 bits (120), Expect: 0.000108445 Length: 260, Idn/Pos/Gap = 53/104/19 (20%/40%/7%) Query: 218 KIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 K + ++R +FW E+I L+ D+ W+ L+ E+ V D A Sbjct: 21 KDLQVWERLTGNFWLPEKIPLSNDLASWQT-LSSTEQQTTIRVFTGLTLLDTAQATVGAV 79 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + D P ME++H+++YS + ++ F E P ++RKA Sbjct: 80 AMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST-KQIDDAFDWSEQNPYLQRKA 138 Query: 338 YWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGL 397 + + D + + + + +F+SG + ++W RG + LI RDE + Sbjct: 139 QIIVDYYRGDDALKRKASSVMLESFLFYSGFYLPMYW-SSRGKLTNTADLIRLIIRDEAV 197 Query: 398 H---CDFACH--LYSMLPAE----ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 H + C L + AE E +H++ + ++ + + +G Sbjct: 198 HGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLYDE------LGWTD 251 Query: 449 QLMSAYIEFVADRLLVELGY 468 ++ Y+ + A++ L LGY Sbjct: 252 DVL-PYMRYNANKALANLGY 270
ref|YP_115670.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma hyopneumoniae 232] gb|AAV27433.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma hyopneumoniae 232] (353 aa) Score: 50 bits (119), Expect: 0.000123933 Length: 264, Idn/Pos/Gap = 58/110/17 (21%/41%/6%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--V 271 I PK E + R V +FW E+I L+ D++ WR L+ + V+ D I Sbjct: 48 INDPKDLEVWTRIVQNFWIPEKIPLSNDLESWRT-LSPTWKKVVTRTFTGLTLLDTIQAT 106 Query: 272 LENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPE-ERTHLFRAMETM 330 + ++A+ ++ + Y M +H+ +Y + E E H + + Sbjct: 107 IGDVAQ--IKHSLTDHEQVIYTNFAFMVGVHARSYGSIFSTLCSSEEIEEAHNW-VINNE 163 Query: 331 PCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 390 +R ++G D + VA A + G G F F+L R +P + L Sbjct: 164 KLQKRARILIPFYVGEDP--LKSKVAAALMPGFLLYGGFYLPFYLSARSKLPNTSDVIRL 221 Query: 391 ISRDEGLHCDFACHLYS-----MLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIG 445 I RD+ +H ++ + + + P ++ + ++ +E EK+++ D S +G Sbjct: 222 ILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKKFTFDLLYKLIELEKDYLYDLY--SEVG 279 Query: 446 MNQQLMSAYIEFVADRLLVELGYD 469 + + + I + A + L LGYD Sbjct: 280 LAESAIKFSI-YNAGKFLQNLGYD 302
gb|AAB81405.1| ribonucleotide reductase R2-1 small subunit [Mycobacterium tuberculosis] (321 aa) Score: 50 bits (118), Expect: 0.00015141 Length: 261, Idn/Pos/Gap = 57/105/22 (21%/40%/8%) Query: 218 KIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 K + ++R +FW E+I L+ D+ W+ L+ E+ V D A Sbjct: 21 KDLQVWERLTGNFWLPEKIPLSNDLASWQT-LSSTEQQTTIRVFTGLTLLDTAQATVGAV 79 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 + D P ME++H+++YS + ++ F E P ++RKA Sbjct: 80 AMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCST-KQIDDAFDWSEQNPYLQRKA 138 Query: 338 YWAIRWI-GSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 396 + + G DA Q V + +F+SG + ++W RG + LI RDE Sbjct: 139 QIIVDYYRGDDAQAQRSSVMLESF--LFYSGFYLPMYW-SSRGKLTNTADLIRLIIRDEA 195 Query: 397 LH---CDFACH--LYSMLPAE----ERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMN 447 +H + C L + AE E +H++ + ++ + + +G Sbjct: 196 VHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLYDE------LGWT 249 Query: 448 QQLMSAYIEFVADRLLVELGY 468 ++ Y+ + A++ L LGY Sbjct: 250 DDVL-PYMRYNANKALANLGY 269
ref|ZP_00321558.1| COG0208: Ribonucleotide reductase, beta subunit [Haemophilus influenzae 86-028NP] (311 aa) Score: 49 bits (117), Expect: 0.000199404 Length: 179, Idn/Pos/Gap = 47/77/23 (26%/43%/12%) Query: 354 LVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACHLYSMLPAEE 413 L++ A+E I F SF F +R LM G + I+RDE LH H+ +++ A + Sbjct: 133 LMSVNALEAIRFYVSFACSFAFAERRLMEGNAKIIKFIARDEALHLTGTQHILNIMAAGQ 192 Query: 414 RVPAERIHSMIRDAVECEKE----FVCDALPV-----------SLIGMNQQLMSAYIEFV 458 P M A EC++E FV A S+IG+N+ ++ Y+E++ Sbjct: 193 DDP-----EMAEIAEECKQEAYDLFVAAAEQEKAWADYLFKDGSMIGLNRDILVQYVEYI 247 Query: 459 ADRLLVELGYDRLWNT-PNPFDWME--LISLQGKTNFFEKRVGEYQKANVTTSATDNVF 514 + + +G + T NP W+ L+S + E V Y + + N F Sbjct: 248 TNIRMQAVGLPLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVGQIDSKVDTNDF 306
pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase R2f-2 Subunit From Mycobacterium Tuberculosis (296 aa) Score: 49 bits (117), Expect: 0.000207899 Length: 257, Idn/Pos/Gap = 52/106/11 (20%/41%/4%) Query: 221 EFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFM 280 E + R +FW E++ ++ D+ W LT E+ V D I A + Sbjct: 26 EVWDRLTGNFWLPEKVPVSNDIPSW-GTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLI 84 Query: 281 RDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWA 340 D P ME++H+++YS + E FR E ++RKA Sbjct: 85 PDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAE-IDDAFRWSEENRNLQRKAEIV 143 Query: 341 IRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 400 ++ D + ++ + +F+SG + ++W R + LI RDE +H Sbjct: 144 LQSYRGDEPLKRKVASTLLESFLFYSGFYLPMYW-SSRAKLTNTADMIRLIIRDEAVHGY 202 Query: 401 FACHLYS--MLPAEERVPAE---RIHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYI 455 + + + + ++ AE + ++ + + E E+ D +G+ + + ++ Sbjct: 203 YIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLY--DEVGLTEDV-KKFL 259 Query: 456 EFVADRLLVELGYDRLW 472 + A++ L+ LGY+ L+ Sbjct: 260 RYNANKALMNLGYEALF 276
ref|ZP_00063610.1| COG0208: Ribonucleotide reductase, beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] (327 aa) Score: 49 bits (117), Expect: 0.000229793 Length: 256, Idn/Pos/Gap = 46/123/12 (17%/48%/4%) Query: 223 YKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLEN-LAERFMR 281 +++ FW I ++ D+ WR ++E ER ++ V D + ++ +A+ + Sbjct: 28 WEKLTQQFWLDTRIPISNDLRTWRGNMSEQERQTMNLVFGGLTTLDTLQSQDGMAQLKLD 87 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAI 341 E Q ME++H+++YS + + + + E +F ++ ++ KA Sbjct: 88 ATNQKEEAVLNNIQF-MESVHAKSYSSIFET-LNEKVEIEKIFEWADSNEFLQYKANRIN 145 Query: 342 RWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 401 + ++ Q+++ + +F+SG + +++L ++ + +LI RDE +H + Sbjct: 146 DIYHNGSALQKKIASVFLETFLFYSGFYTPLYFLGHNKML-NVAEIIKLIIRDESVHGTY 204 Query: 402 ACHLYSM----LPAEERVPAER-IHSMIRDAVECEKEFVCDALPVSLIGMNQQLMSAYIE 456 + + + + AEER + ++ ++ + E E+++ + +G +Q+++ ++ Sbjct: 205 IGYKFQIGFNKISAEERTELQSWMYDLLYELYENEEKYTHELY--DDLGWTEQVLT-FLR 261 Query: 457 FVADRLLVELGYDRLW 472 + A++ L+ LG + ++ Sbjct: 262 YNANKALMNLGQEPMF 277
gb|AAD41037.1| ribonucleotide reductase beta-chain [Corynebacterium glutamicum] (334 aa) Score: 49 bits (116), Expect: 0.000253992 Length: 264, Idn/Pos/Gap = 54/104/11 (20%/39%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R +FW E++ ++ D+ W L E E+ V D I Sbjct: 29 IPDSKDLEVWDRLTGNFWLPEKVPVSNDIKSW-GTLNEVEKAATMRVFTGLTLLDTIQGT 87 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + D + ME++H+++YS + + E FR E + Sbjct: 88 VGAISLLPDADSLHEEAVLTNIAFMESVHAKSYSNIF-MTLASTAEINDAFRWSEENENL 146 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RKA + + D + ++ + +F+SG + ++W L LI R Sbjct: 147 QRKAKIILSYYEGDDPLKRKIASVILESFLFYSGFYLPMYWSSHSKLTNTADVI-RLIIR 205 Query: 394 DEGLHCDFACHLYSM-----LPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H + + Y P + E ++ D + E ++ D +G + Sbjct: 206 DEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLY--DDLGWTE 263 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ ++A++ L LGY+ L+ Sbjct: 264 DV-KRFLRYIANKALNNLGYEGLF 286
ref|NP_764069.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus epidermidis ATCC 12228] ref|YP_187991.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus epidermidis RP62A] gb|AAW53787.1| ribonucleoside-diphosphate reductase 2, beta subunit [Staphylococcus epidermidis RP62A] gb|AAO04111.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus epidermidis ATCC 12228] (322 aa) Score: 49 bits (116), Expect: 0.000278407 Length: 270, Idn/Pos/Gap = 60/119/36 (22%/44%/13%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFA------ASDGIVLENL 275 F++++++ W E ++ D+ W+ LT++E+ LA A DG+ L L Sbjct: 16 FWRQNISQMWVETEFKVSKDIASWKT-LTDSEKNTFKKALAGLTGLDTHQADDGMPLIML 74 Query: 276 AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRR 335 +R + Y F ME IH+++YS + + E L + P ++ Sbjct: 75 HTTDLRK------KAVYSFMAMMEQIHAKSYSHIFTTLLPSSETNYLLDTWVIEEPHLKY 128 Query: 336 KAYWAIR-----WIGSDASFQERLVAFAA---VEGIFFSGSFCAIFWLKKRGLMPGLTFS 387 K+ + W G +AS ++ +A + +E F F +L +G M T S Sbjct: 129 KSDKIVENYHKLW-GKEASIYDQYIARVSSVFLETFLFYSGFYYPLYLAGQGKM---TTS 184 Query: 388 NELISR---DEGLHCDF----ACHLYSMLPAEERVPAER-IHSMIRDAVECEKEFVCDAL 439 E+I + DE +H F A L + L E+ A++ ++ ++ + + E + L Sbjct: 185 GEIIRKILLDESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYT--HL 242 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYD 469 IG+ + +++ Y+ + ++ L LG++ Sbjct: 243 LYDDIGLAEDVLN-YVRYNGNKALSNLGFE 271
emb|CAB13896.2| yosP [Bacillus subtilis subsp. subtilis str. 168] ref|NP_389886.2| hypothetical protein BSU20040 [Bacillus subtilis subsp. subtilis str. 168] gb|AAB92486.1| YojQ/S [Bacillus subtilis] gb|AAC13135.1| unknown [Bacteriophage SPBc2] ref|NP_046714.1| unknown [Bacteriophage SPBc2] pir||T12926 hypothetical protein bnrdF - Bacillus subtilis phage SPBc2 (329 aa) Score: 49 bits (116), Expect: 0.000302633 Length: 309, Idn/Pos/Gap = 74/134/26 (23%/43%/8%) Query: 215 KHPKIFE--FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVL 272 KH F FY ++V FW EEI L D+ W+ L + E+ VLA D Sbjct: 12 KHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWK-YLGKNEQDTYMKVLAGLTLLDTEQG 70 Query: 273 ENLAERFMRDVEIPEARCFYGFQIAMEN-IHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 V+ + + F MEN +H+++YS + + E+ +F ++ Sbjct: 71 NTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIF-LTLAPTEQINEVFEWVKNNR 129 Query: 332 CVRRKA------YWAIRWIGSDASFQERLVAFAAVEG-IFFSGSFCAIFWLKKRGLMPGL 384 +++KA Y I+ + S + +VA +E +F+SG + +++ + LM Sbjct: 130 FLQKKARTIVSVYKTIK-KNDEISLFKGMVASVFLESFLFYSGFYYPLYFYGQGKLMQSG 188 Query: 385 TFSNELISRDEGLHCDF----ACHLY-SMLPAEERVPAERIHSMIRDAVECEKEFVCDAL 439 N LI RDE +H + A +Y P +++ +++++ E E E+ D Sbjct: 189 EIIN-LIIRDEAIHGVYVGLLAQEIYKKQTPQKQKELYAWALNLLQELYENELEYTEDVY 247 Query: 440 PVSLIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKT---NFFEKR 496 +G+ + +I + A++ L LG+D W + + + L KT +FF + Sbjct: 248 --DQVGLAPDV-KKFIRYNANKALNNLGFDH-WFEEEDVNPIVINGLNTKTKSHDFFSTK 303 Query: 497 VGEYQKANV 505 Y+KA V Sbjct: 304 GNGYKKATV 312
ref|NP_695856.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium longum NCC2705] gb|AAN24492.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium longum NCC2705] (330 aa) Score: 48 bits (115), Expect: 0.000366657 Length: 264, Idn/Pos/Gap = 53/105/11 (20%/39%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 ++ K E + R +FW E++ ++ D+ W+ ++TE E V D I Sbjct: 25 LEDEKDLEVWDRLTGNFWLPEKVPVSNDIPSWQ-KMTEDEHTLTMRVFTGLTLLDTIQGT 83 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + D P Y ME++H+++YS + E+ F E + Sbjct: 84 VGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCST-EQIDAAFDWSENNEFL 142 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 ++KA + + D ++ R VA +E F F + + LI R Sbjct: 143 QKKAEIVLDYYEGDNPYK-RKVASTLLESFLFYSGFYLPMYFSAHAKLTNTADVIRLIIR 201 Query: 394 DEGLHCDFACHLY----SMLPAEERVP-AERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H + + Y + L ER+ + + ++ + + E E+ +G+ Sbjct: 202 DEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSLY--DCVGLTD 259 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ + ++ L+ LGY L+ Sbjct: 260 DV-EKFLRYNGNKALMNLGYPALF 282
ref|NP_940202.1| ribonucleotide reductase beta-chain 1 [Corynebacterium diphtheriae NCTC 13129] emb|CAE50394.1| ribonucleotide reductase beta-chain 1 [Corynebacterium diphtheriae] (328 aa) Score: 48 bits (113), Expect: 0.000635947 Length: 185, Idn/Pos/Gap = 43/73/3 (23%/39%/1%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R +FW E+I ++ D+ W N L + E+ V D I Sbjct: 23 IPDEKDLEVWDRLTGNFWLPEKIPVSNDIKSW-NTLNDLEKQTTMRVFTGLTLLDTIQGT 81 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + D Y ME++H+++YS + P E FR E + Sbjct: 82 VGAVSMLPDAVSLHEEAVYTNIAFMESVHAKSYSNIFMTLASTP-EINDAFRWSEENENL 140 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 ++KA + + D + ++ + +F+SG + ++W L LI R Sbjct: 141 QKKAKIILSYYEGDDPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADII-RLIIR 199 Query: 394 DEGLH 398 DE +H Sbjct: 200 DEAVH 204
ref|NP_757474.1| ribonucleotide diphosphate reductase subunit beta [Mycoplasma penetrans HF-2] dbj|BAC43878.1| ribonucleotide diphosphate reductase subunit beta [Mycoplasma penetrans HF-2] (339 aa) Score: 47 bits (112), Expect: 0.000837532 Length: 263, Idn/Pos/Gap = 56/105/15 (21%/39%/5%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGI--V 271 I K E + R +FW E+I ++ D+ W N+L + V D I Sbjct: 34 INDDKDLEVWNRITQNFWLPEKIAISNDLPSW-NKLDSNWQELVVRTFTGLTLLDSIQAT 92 Query: 272 LENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 + ++A+ +++ + Y M +H+ +Y + + + + + Sbjct: 93 IGDVAQ--VKNSLTDHEQVIYTNFAFMVGVHARSYGSIFSTFCSSDQINSAHDWVVNCES 150 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 +R +IG D + VA A + G G F F+L + L+P LI Sbjct: 151 LQKRAQVLIPYYIGDDP--LKSKVAAAMMPGFLLYGGFYLPFYLGAKNLLPNTLDIIRLI 208 Query: 392 SRDEGLHCDFACHLY----SMLPAEERVPAER-IHSMIRDAVECEKEFVCDALPVSLIGM 446 RD+ +H ++ + Y + LP E++ ++ + ++ ++ EKEF+ + I Sbjct: 209 LRDKVIHNYYSGYKYQKKVAKLPPEKQAEMKKFVFDLLYQVIDLEKEFLNELYAGFNIAD 268 Query: 447 NQQLMSAYIEFVADRLLVELGYD 469 S Y A + L LGYD Sbjct: 269 QAIKFSVY---NAGKFLQNLGYD 288
ref|YP_226766.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN [Corynebacterium glutamicum ATCC 13032] emb|CAF21187.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN [Corynebacterium glutamicum ATCC 13032] dbj|BAB99918.1| Ribonucleotide reductase beta subunit [Corynebacterium glutamicum ATCC 13032] ref|NP_601725.1| ribonucleotide reductase beta subunit [Corynebacterium glutamicum ATCC 13032] dbj|BAB64405.1| ribonucleoside diphosphate reductase [Corynebacterium glutamicum] (334 aa) Score: 47 bits (111), Expect: 0.00122939 Length: 264, Idn/Pos/Gap = 54/103/11 (20%/39%/4%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R +FW E++ ++ D+ W L E E+ V D I Sbjct: 29 IPDSKDLEVWDRLTGNFWLPEKVPVSNDIKSW-GTLNEVEKAATMRVFTGLTLLDTIQGT 87 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + D + ME++H+++YS + + E FR E + Sbjct: 88 VGAISLLPDADSLHEEAVLTNIAFMESVHAKSYSNIF-MTLASTAEINDAFRWSEENENL 146 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 +RKA + + D + ++ + +F+SG + ++W L LI R Sbjct: 147 QRKAKIILSYYEGDDPLKRKIASVILESFLFYSGFYLPMYWSSHSKLTNTADVI-RLIIR 205 Query: 394 DEGLHCDFACHLYSM-----LPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGMNQ 448 DE +H + + Y P + E ++ D + E ++ D +G + Sbjct: 206 DEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDLY--DDLGWTE 263 Query: 449 QLMSAYIEFVADRLLVELGYDRLW 472 + ++ + A++ L LGY+ L+ Sbjct: 264 DV-KRFLRYNANKALNNLGYEGLF 286
ref|ZP_00121145.1| COG0208: Ribonucleotide reductase, beta subunit [Bifidobacterium longum DJO10A] (330 aa) Score: 46 bits (110), Expect: 0.0012925 Length: 185, Idn/Pos/Gap = 41/72/3 (22%/38%/1%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 ++ K E + R +FW E++ ++ D+ W+ ++TE E V D I Sbjct: 25 LEDEKDLEVWDRLTGNFWLPEKVPVSNDIPSWQ-KMTEDEHTLTMRVFTGLTLLDTIQGT 83 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCV 333 A + D P Y ME++H+++YS + E+ F E + Sbjct: 84 VGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCST-EQIDAAFDWSENNEFL 142 Query: 334 RRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 393 ++KA + + D ++ R VA +E F F + + LI R Sbjct: 143 QKKAEIVLDYYEGDNPYK-RKVASTLLESFLFYSGFYLPMYFSAHAKLTNTADVIRLIIR 201 Query: 394 DEGLH 398 DE +H Sbjct: 202 DEAVH 206
ref|YP_033048.1| Ribonucleotide reductase beta-chain [Bartonella henselae str. Houston-1] emb|CAF27007.1| Ribonucleotide reductase beta-chain [Bartonella henselae str. Houston-1] (324 aa) Score: 46 bits (110), Expect: 0.00161908 Length: 182, Idn/Pos/Gap = 45/74/5 (24%/40%/2%) Query: 218 KIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 K E + R +FW E++ L+ D+ W + LTE ER V D I A Sbjct: 23 KDLEVWNRLTGNFWLPEKVPLSNDIPSWAS-LTEEERKLTIRVFTGLTLLDTIQNTVGAI 81 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 M D ME +H+ +YS + E FR E +++KA Sbjct: 82 SLMADAITEHEEAVLTNIAFMEAVHARSYSSIFSTLCSTVEV-DDAFRWSEENIHLQKKA 140 Query: 338 YWAI-RWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 396 + R+ G+D ++++ + +F+SG + ++W + L LI RDE Sbjct: 141 RLVLERYEGND-PLKKKIASTLLESFLFYSGFYLPMYWASRAKLTNTADLI-RLIIRDEA 198 Query: 397 LH 398 +H Sbjct: 199 VH 200
ref|NP_708490.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 2a str. 301] gb|AAN44197.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 2a str. 301] ref|NP_838214.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 2a str. 2457T] gb|AAP18024.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella flexneri 2a str. 2457T] (319 aa) Score: 46 bits (109), Expect: 0.00164633 Length: 187, Idn/Pos/Gap = 43/70/7 (22%/37%/3%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R ++FW E++ L+ D+ W+ LT E+ V D L+ Sbjct: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLD--TLQ 70 Query: 274 NL--AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N+ A M D P ME +H+ +YS + + + + E P Sbjct: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 R+ + G D ++ +A +E F F + RG + LI Sbjct: 131 LQRKAQIIQQHYRGDDP--LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 Query: 392 SRDEGLH 398 RDE +H Sbjct: 189 IRDEAVH 195
ref|NP_417162.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Escherichia coli K12] gb|AAC75723.1| ribonucleoside-diphosphate reductase 2, beta chain, frag; ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia coli K12] pir||E65047 ribonucleoside-diphosphate reductase (EC 1.17.4.1) 2 beta chain - Escherichia coli (strain K-12) sp|P37146|RIR4_ECOLI Ribonucleoside-diphosphate reductase 2 beta subunit (Ribonucleotide reductase 2) (R2F protein) dbj|BAA16541.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN (EC 1.17.4.1) (RIBONUCLEOTIDE REDUCTASE 2) (FRAGMENT). [Escherichia coli] (319 aa) Score: 46 bits (109), Expect: 0.00168806 Length: 187, Idn/Pos/Gap = 43/70/7 (22%/37%/3%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R ++FW E++ L+ D+ W+ LT E+ V D L+ Sbjct: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLD--TLQ 70 Query: 274 NL--AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N+ A M D P ME +H+ +YS + + + + E P Sbjct: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 R+ + G D ++ +A +E F F + RG + LI Sbjct: 131 LQRKAQIIQQHYRGDDP--LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 Query: 392 SRDEGLH 398 RDE +H Sbjct: 189 IRDEAVH 195
gb|AAG57786.1| ribonucleoside-diphosphate reductase 2, beta chain [Escherichia coli O157:H7 EDL933] dbj|BAB36962.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli O157:H7] pir||F85915 hypothetical protein nrdF [imported] - Escherichia coli (strain O157:H7, substrain EDL933) pir||C91071 hypothetical protein ECs3539 [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) ref|NP_311566.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli O157:H7] ref|NP_289228.1| ribonucleoside-diphosphate reductase 2, beta chain [Escherichia coli O157:H7 EDL933] (319 aa) Score: 46 bits (109), Expect: 0.00173085 Length: 187, Idn/Pos/Gap = 43/70/7 (22%/37%/3%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R ++FW E++ L+ D+ W+ LT E+ V D L+ Sbjct: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LTVVEQQLTMRVFTGLTLLD--TLQ 70 Query: 274 NL--AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N+ A M D P ME +H+ +YS + + + + E P Sbjct: 71 NVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 R+ + G D ++ +A +E F F + RG + LI Sbjct: 131 LQRKAQIIQQHYRGDDP--LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 Query: 392 SRDEGLH 398 RDE +H Sbjct: 189 IRDEAVH 195
ref|YP_071464.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pseudotuberculosis IP 32953] ref|NP_668547.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Yersinia pestis KIM] gb|AAS62651.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis biovar Medievalis str. 91001] ref|NP_993774.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis biovar Medievalis str. 91001] emb|CAH22196.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pseudotuberculosis IP 32953] emb|CAC92889.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis CO92] gb|AAM84798.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Yersinia pestis KIM] ref|NP_406170.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis CO92] pir||AB0323 ribonucleoside-diphosphate reductase (EC 1.17.4.1) beta chain [imported] - Yersinia pestis (strain CO92) (323 aa) Score: 46 bits (109), Expect: 0.00175997 Length: 269, Idn/Pos/Gap = 56/109/21 (20%/40%/7%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I+ K E + R ++FW E++ L+ D+ W LT E+ V D I Sbjct: 18 IEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSWAT-LTPHEQQLTIRVFTGLTLLDTIQNT 76 Query: 274 NLAERFMRDVEIPEARCFYGFQIAMENIHSETYS-----LLIDAYVKDPEERTHLFRAME 328 A ++D P + ME +H+ +YS L + + V D +R E Sbjct: 77 LGAPALIKDAITPHEEAIFSNISFMEAVHARSYSSIFSTLCLTSDVDDA------YRWSE 130 Query: 329 TMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 388 +++KA + +D ++++ + +F+SG + ++W R + Sbjct: 131 DNGPLQKKADIISQHYHNDDPLKKKIASVFLESFLFYSGFYLPMYW-SSRAKLTNTADLI 189 Query: 389 ELISRDEGLH-----CDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSL 443 LI RDE +H F L + A + +++D + E + D Sbjct: 190 RLIIRDEAVHGYYIGYKFQKGLGKIDSAHRQEIKNFAFDLLQDLYDNEVRYTEDLY--DH 247 Query: 444 IGMNQQLMSAYIEFVADRLLVELGYDRLW 472 +G + + ++ + A++ L+ LGY+ L+ Sbjct: 248 VGWTEDV-KKFLHYNANKALMNLGYEALF 275
ref|YP_031892.1| Ribonucleotide reductase beta-chain [Bartonella quintana str. Toulouse] emb|CAF25686.1| Ribonucleotide reductase beta-chain [Bartonella quintana str. Toulouse] (324 aa) Score: 46 bits (109), Expect: 0.00194531 Length: 266, Idn/Pos/Gap = 58/107/23 (21%/40%/8%) Query: 218 KIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAE 277 K E + R +FW E++ L+ D+ W + LTE ER V D I A Sbjct: 23 KDLEVWNRLTGNFWLPEKVPLSNDIPSWAS-LTEEERKLTVRVFTGLTLLDTIQNTVGAI 81 Query: 278 RFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKA 337 M D ME +H+ +YS + E FR E +++KA Sbjct: 82 SLMADAITEHEEAVLTNIAFMEAVHARSYSSIFSTLCSTVEV-DDAFRWSEENIHLQKKA 140 Query: 338 YWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGL 397 + + ++++ + +F+SG + ++W + L LI RDE + Sbjct: 141 RLVLERYEASDPLKKKIASTLLESFLFYSGFYLPMYWASRAKLTNTADLI-RLIIRDEAV 199 Query: 398 HCDFACHLYSMLPAEERVPAERIHSMIRD----------AVECE-KEFVCDALPVSLIGM 446 H + + + + A+ E I+D +EC+ E + DAL G+ Sbjct: 200 HGYYIGYKFQLGFAKLN---ESKKQEIKDFSFNLLFDLYNIECKYTEDLYDAL-----GL 251 Query: 447 NQQLMSAYIEFVADRLLVELGYDRLW 472 + + ++ + A++ L+ LG++ L+ Sbjct: 252 TEDV-KVFLHYNANKALMNLGFEPLF 276
ref|NP_755111.1| Ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli CFT073] gb|AAN81681.1| Ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli CFT073] (319 aa) Score: 45 bits (106), Expect: 0.00369837 Length: 187, Idn/Pos/Gap = 42/70/7 (22%/37%/3%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R ++FW E++ L+ D+ W+ L+ E+ V D L+ Sbjct: 14 ISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT-LSVVEQQLTMRVFTGLTLLD--TLQ 70 Query: 274 NL--AERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMP 331 N+ A M D P ME +H+ +YS + + + + E P Sbjct: 71 NVIGAPSLMPDALTPHEEAILSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP 130 Query: 332 CVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELI 391 R+ + G D ++ +A +E F F + RG + LI Sbjct: 131 LQRKAQIIQQHYRGDDP--LKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLI 188 Query: 392 SRDEGLH 398 RDE +H Sbjct: 189 IRDEAVH 195
gb|AAT68710.2| ribonucleoside reductase beta subunit [Borrelia hermsii] (321 aa) Score: 45 bits (106), Expect: 0.0042977 Length: 309, Idn/Pos/Gap = 71/126/23 (22%/40%/7%) Query: 222 FYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLENLAERFMR 281 F+ +++ FW EEI ++ D W N L ER VL D R Sbjct: 21 FWDQNIRQFWVDEEIPISDDKLVW-NTLDGEERDVYEKVLGGLTLLDTEQGSVGMPRIAL 79 Query: 282 DVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRAMETMPCVRRKAYWAI 341 ++ + + GF AME++H++ I + + + + H+F ++T + K Sbjct: 80 AIDNLDYKPVLGFMGAMEHMHAK-SYSSIFSSLSNIDRIDHIFGWVKTYRNFQDKLDLI- 137 Query: 342 RWIGSDASFQERLVAFAA------VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 395 +G S +R+ + A +E F F +L +G M LI RDE Sbjct: 138 --LGKYNSIHDRMSLYKALCTSVFLETFLFYSGFFYPLYLAGQGKMVNSGEIINLILRDE 195 Query: 396 GLHCDFACHL----YSMLPAEERVPAERIHSMIRDAV-ECEKEFVCDALPVSLIGMNQQL 450 +H F L ++ + +E+ A+R ++I + + E + D S IG+ + Sbjct: 196 SVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYTKDLY--SSIGL-EGA 252 Query: 451 MSAYIEFVADRLLVELGYDRLWNTP----NPFDWMELISLQGKTNFFEKRVGEYQKANVT 506 + ++ + AD+ L+ LG+D +N NP L + +FF + Y K Sbjct: 253 VDVFVRYNADKALMNLGFDSAFNIRDIDVNPLVLNGLRTNTKTHDFFSTKGNGYIKPMKV 312 Query: 507 TSATDNVFA 515 D+ FA Sbjct: 313 EPLQDDDFA 321
ref|NP_975825.1| ribonucleoside-diphosphate reductase 2 beta chain [Mycoplasma mycoides subsp. mycoides SC str. PG1] emb|CAE77467.1| ribonucleoside-diphosphate reductase 2 beta chain [Mycoplasma mycoides subsp. mycoides SC] (339 aa) Score: 45 bits (106), Expect: 0.00467167 Length: 268, Idn/Pos/Gap = 59/110/25 (22%/41%/9%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 I K E + R +FW E+I ++ D+ WR+ +E ++ V+ G+ L Sbjct: 34 INDEKDLEVWNRITQNFWLPEKIPVSNDLSSWRSLSSEWQQ-LVTRTFT------GLTLL 86 Query: 274 NLAERFMRDVEIPE------ARCFYGFQIAMENIHSETYSLLIDAYVKDPE-ERTHLFRA 326 + + + DV E + Y M +H+ +Y + + E H + Sbjct: 87 DTVQATVGDVAQIEHSLTDHEQVIYSNFAFMVGVHARSYGTIFSTLCSSEQIEEAHEW-V 145 Query: 327 METMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 386 ++T +R + G+D + VA A + G G F F+L RG +P + Sbjct: 146 VKTETLQKRAKALIPYYTGTDP--LKSKVAAALMPGFLLYGGFYLPFYLSARGKLPNTSD 203 Query: 387 SNELISRDEGLHCDFACHLY----SMLPAEERVP-AERIHSMIRDAVECEKEFVCDALPV 441 LI RD+ +H ++ + Y + LP E++ E + ++ + ++ E ++ + Sbjct: 204 IIRLILRDKVIHNYYSGYKYQKKVAKLPVEKQTEMKEFVFKLLYELIDLETAYLKELYAG 263 Query: 442 SLIGMNQQLMSAYIEFVADRLLVELGYD 469 I + S Y A + L LGYD Sbjct: 264 FDIVDDAIRFSVY---NAGKFLQNLGYD 288
ref|YP_053772.1| ribonucleoside-diphosphate reductase beta chain [Mesoplasma florum L1] gb|AAT75888.1| ribonucleoside-diphosphate reductase beta chain [Mesoplasma florum L1] (340 aa) Score: 44 bits (103), Expect: 0.00830814 Length: 269, Idn/Pos/Gap = 57/110/27 (21%/40%/10%) Query: 214 IKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAASDGIVLE 273 + K E + R +FW E+I ++ D+ WR LT + ++ G+ L Sbjct: 35 VNDEKDLEVWNRITQNFWLPEKIPVSNDLTSWRT-LTPEWQELITRTFT------GLTLL 87 Query: 274 NLAERFMRDV-EIPEA-----RCFYGFQIAMENIHSETYSLLIDAYVKDP--EERTHLFR 325 + + + DV ++P + + Y M +H+ +Y + EE Sbjct: 88 DTIQATVGDVAQVPNSLTDHEQVIYTNFAFMVAVHARSYGSIFSTLCSSEQIEEAHEWVI 147 Query: 326 AMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLT 385 ET+ + +A I + +D + + VA A + G G F F+L RG +P + Sbjct: 148 NTETL---QERAKALIPYYVNDDPLKSK-VAAALMPGFLLYGGFYLPFYLSARGKLPNTS 203 Query: 386 FSNELISRDEGLHCDFACHLYS-----MLPAEERVPAERIHSMIRDAVECEKEFVCDALP 440 LI RD+ +H ++ + Y + P ++ E + ++ + ++ EK ++ + Sbjct: 204 DIIRLILRDKVIHNYYSGYKYQKKVAKLSPEKQAEMKEFVFKLLYELIDLEKAYLKELYE 263 Query: 441 VSLIGMNQQLMSAYIEFVADRLLVELGYD 469 + + S Y A + L LGYD Sbjct: 264 DFGLADDAIRFSVY---NAGKFLQNLGYD 289