Cyanidioschyzon merolae Genome Project

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CMN269C (333 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)


CG8315-PA [Drosophila melanogaster]

unnamed protein product [Tetraodon nigroviridis]

Unknown (protein for MGC:108178) [Xenopus tropicalis]

peroxisomal biogenesis factor 11a [Mus musculus]

GA20979-PA [Drosophila pseudoobscura]

ENSANGP00000010077 [Anopheles gambiae str. PEST]

hypothetical protein [Neurospora crassa]

OSJNBb0020O11.14 [Oryza sativa (japonica cultivar-group)]

peroxisomal biogenesis factor 11A [Rattus norvegicus]
 
ref|NP_611071.1| CG8315-PA [Drosophila melanogaster]
gb|AAF58084.1| CG8315-PA [Drosophila melanogaster]
gb|AAL48984.1| RE39562p [Drosophila melanogaster]
(241 aa)

Score: 54 bits (129), Expect: 4.7061e-06
Length: 241, Idn/Pos/Gap = 62/100/34 (25%/41%/14%)

Query:  17 GRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFRLARGLNV  76
           GRDK+ RL+Q+ +   R  +  L  +     P L     T+E +L+  RKL R  + ++V
Sbjct:  13 GRDKIARLIQYAS---RAMWDSL--ESANSNPALVDNFKTVEYILSTFRKLLRFGKCVDV  67

Query:  77 LAKYWNHQRTTKGGTLELIFGTPILQLLADLGLFCYFGFDHLVWLYRTGLFLEPPGQKRA 136
              ++   +T     L +     + +L   L LF     DH +WL RTGL         A
Sbjct:  68 ---FYGALKTIHHPDLNIRVTLTLSKLSQSLFLFA----DHFLWLARTGL-----TAVNA 115

Query: 137 RFWGRCAGYSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSIS--ALAATALEPERP 194
           + W   A    L S + +     Y++  +L+  R     G+K  IS   + A+   PE  
Sbjct: 116 KRWSNIANKYWLFSIIMNLCRDFYEILRVLDLHR----SGSKSGISRCRIPASINSPEDF 171

Query: 195 PPGSFETGVLARA--------VRYGCDILVGLNMAEPGQHSQTLVGAAGVLSSVLQLAQL 246
              + ++ VL +         V+  CD  + L        +   +G  G +SS   LA L
Sbjct: 172 KRLALQSYVLMQGHKDIVVDTVKNACDFFIPLTALGYTSLTPRTIGLLGAISS---LAGL 228

Query: 247 W 247
           W
Sbjct: 229 W 229



emb|CAG13099.1| unnamed protein product [Tetraodon nigroviridis]
(246 aa)

Score: 53 bits (126), Expect: 1.02249e-05
Length: 250, Idn/Pos/Gap = 61/109/40 (24%/43%/16%)

Query:  15 TDGRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFRLARGL  74
           + GRD+++R  Q+           LL   P++  L+A K  +LE  ++ GRKLFRL   +
Sbjct:  11 SQGRDRIFRATQYACALS----VYLLRNSPDKKALVA-KLRSLEATMSSGRKLFRLGNAV  65

Query:  75 NVLAKYWNHQRTTKGGTLELIFGTPILQLL---ADLGLFCYFGFDHLVWLYRTGLFLEPP 131
           N +      +RT +          P+L+L    A+ G   YF  D+++W    GL  E  
Sbjct:  66 NSIEA---AKRTVR-------LSDPVLRLCLTAANFGRAFYFVCDNVLWARSVGLLREID 115

Query: 132 GQKRARFWGRCAGYSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSI------SALA 185
            ++    W   +     LS + +    VY +  ++ ++ R  ++G +  +      S   
Sbjct: 116 KER----WSLNSSRFYFLSLVMNLTRDVYAITQLMAQRLR--DRGFRRKLDQHLRESPQV 169

Query: 186 ATALEPERPPPGSFETG-------VLARAVRYGCDILVGLNMAEPGQHSQTLVGAAGVLS 238
           A A+ P+                 V A  ++  CD+L+ L+     + +  +VG  G++S
Sbjct: 170 AEAVVPQLDAFLFLLLDSLRSHPEVAADTLKNACDLLIPLDRLGIYRSNAGVVGFCGLIS 229

Query: 239 S---VLQLAQ 245
           S   +L LAQ
Sbjct: 230 SLIGILTLAQ 239



gb|AAH90557.1| Unknown (protein for MGC:108178) [Xenopus tropicalis]
(247 aa)

Score: 51 bits (123), Expect: 2.66919e-05
Length: 251, Idn/Pos/Gap = 58/109/42 (23%/43%/16%)

Query:  10 EVLATTDGRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFR  69
           ++   + GRD+++R  Q+    +R      L+++      LA K   +E  ++ GRKLFR
Sbjct:   6 QITNQSQGRDRLFRATQYACMLLR-----YLVENKPGTQKLATKLKRVESNMSSGRKLFR  60

Query:  70 LARGLNVLAKYWNHQRTTKGGTLELIFGTPILQLL---ADLGLFCYFGFDHLVWLYRTGL 126
           L   ++ L          K     +    PI +     A+L    YF  D ++W    G+
Sbjct:  61 LGNFVHAL----------KASKASIQISDPIPRCCLTAANLNRVLYFVCDTVLWARSVGI 110

Query: 127 FLEPPGQKRARFWGR---CAGYSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSISA 183
                G  + R+  R   C  YSLLL+ L    + +Y++   + ++ +  ++ A+D+ +A
Sbjct: 111 V---SGISKERWLSRATKCYYYSLLLNIL----MDIYEISWRMEKEAKERKQKARDT-AA 162

Query: 184 LAATALEPERPPPGSFET-------------GVLARAVRYGCDILVGLNMAEPGQHSQTL 230
            +   L+     P  FE               +L   ++  CD+   L+  E    SQ +
Sbjct: 163 ESDQDLKFLSVLPKGFENFLLLLYLSFRNHPPLLLDTIKNVCDLFSPLDRLEIYSTSQGI 222

Query: 231 VGAAGVLSSVL 241
           +G  G++SS++
Sbjct: 223 IGICGLVSSLV 233



ref|NP_035198.1| peroxisomal biogenesis factor 11a [Mus musculus]
gb|AAH23439.1| Peroxisomal biogenesis factor 11a [Mus musculus]
sp|Q9Z211|PX11A_MOUSE Peroxisomal membrane protein 11A (Peroxin-11A) (Peroxisomal biogenesis factor 11A) (PEX11alpha)
gb|AAC78659.1| peroxisomal biogenesis factor [Mus musculus]
(246 aa)

Score: 47 bits (111), Expect: 0.000520471
Length: 247, Idn/Pos/Gap = 66/101/34 (26%/40%/13%)

Query:  11 VLATTDGRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFRL  70
           V   + GRD+++R  Q     +R  Y      D E V L  ++   LE  ++ GRK FRL
Sbjct:   7 VANQSQGRDRLFRATQHACMLLR--YLLESKADKEAVVLKLKR---LETSVSTGRKWFRL  61

Query:  71 ARGLNVLAKYWNHQRTTKGGTLELIFGTPILQL-LADLGLFCYFGFDHLVWLYRTGLFLE 129
               NV       +++ +   L      P L L LA+L    Y+  D ++W    GL   
Sbjct:  62 G---NVFHAIQATEQSIQAADL-----APRLCLTLANLNRVVYYICDTVLWAKSVGLTSG 113

Query: 130 PPGQKRARFWGRCAGYSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSISALAAT-- 187
              +K  R+  R   Y LLLS +      + Q+  +  R R   EK ++D      A   
Sbjct: 114 VNREKWQRWAARHYYYFLLLSLVRDLYEILLQMGQVA-RDRAKREKSSRDPPKYSVANEE 172

Query: 188 -----------ALEPERPPPGSFETGVLARAVRYGCDILVGLNMAEPGQHSQTLVGAAGV 236
                          +R PP      +L   V+  CDIL+ LN     + +  +VG  G+
Sbjct: 173 TEWLQSFLLLLFQSLKRHPP------LLLDTVKNFCDILIPLNQLGIYKSNLGVVGLGGL 226

Query: 237 LSSVLQL 243
           +SS+  L
Sbjct: 227 ISSLAGL 233



gb|EAL26603.1| GA20979-PA [Drosophila pseudoobscura]
(241 aa)

Score: 46 bits (110), Expect: 0.000796531
Length: 241, Idn/Pos/Gap = 59/99/34 (24%/41%/14%)

Query:  17 GRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFRLARGLNV  76
           GRDK+ RL+Q+ +   R  +  L + +    P L     T+E +L+  RKL R  + L+V
Sbjct:  13 GRDKLARLIQYAS---RAMWDSLEVCNSS--PALVDNFKTVEYILSTFRKLLRFGKCLDV  67

Query:  77 LAKYWNHQRTTKGGTLELIFGTPILQLLADLGLFCYFGFDHLVWLYRTGLFLEPPGQKRA 136
              ++   RT     L +     + +L   L LF     DH +WL RTGL      +   
Sbjct:  68 ---FYGTLRTIHYPDLTIRATLTLGKLSQSLFLFA----DHFLWLARTGL-----TKVDV 115

Query: 137 RFWGRCAGYSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSIS--ALAATALEPERP 194
           + W   A    L S + +     Y++  +L+  +     G +  IS   L  +   P+  
Sbjct: 116 KRWSNIANKYWLFSIIMNLCRDFYEIVRVLDLHK----SGCRSGISRCKLPTSINSPQDF 171

Query: 195 PPGSFETGVLARA--------VRYGCDILVGLNMAEPGQHSQTLVGAAGVLSSVLQLAQL 246
              + ++ V+ +         V+  CD  + L        +   +G  G +SS   LA L
Sbjct: 172 KRLALQSYVIIQGHKDIAVDTVKNICDFFIPLTALGYTNLTPRTIGFLGAISS---LAGL 228

Query: 247 W 247
           W
Sbjct: 229 W 229



gb|EAA12812.2| ENSANGP00000010077 [Anopheles gambiae str. PEST]
ref|XP_317688.2| ENSANGP00000010077 [Anopheles gambiae str. PEST]
(219 aa)

Score: 46 bits (110), Expect: 0.000844439
Length: 245, Idn/Pos/Gap = 62/99/44 (25%/40%/17%)

Query:  13 ATTDGRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFRLAR  72
           + T G+DK+ RL Q++ + +         KD        Q    +E +L+  RKL R  +
Sbjct:   9 SQTVGKDKIARLCQYSCRALWAS------KDGSESIETVQLLKHIESILSSFRKLLRFGK  62

Query:  73 GLNVLAKYWNHQRTTKGGTLELIFGTPILQLLADLGLFCYFGF---DHLVWLYRTGLFLE 129
           G  VL         T G  L+ +      QL   LG      F   DH+VWL R+G+   
Sbjct:  63 GFEVLYS------ATAGLKLKELSA----QLFITLGKIASGLFLLADHVVWLSRSGINKN 112

Query: 130 PPGQK----RARFWGRCAGYSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSISALA 185
               K      RFW        L+S L +    V +L+ +     RS+ +  + ++ A+ 
Sbjct: 113 INTSKWVDRSNRFW--------LISILFNLCRDVQELYRLFVYYSRSNIRNLQRTLYAVY 164

Query: 186 ATALEPERPPPGSFETGVLARAVRYGCDILVGLNMAEPGQHSQTLVGAAGVLSSVLQLAQ 245
                 E  P       +L   ++  CD+ + LN       S   +G  G +SS++ L  
Sbjct: 165 R-----ENKP-------LLVDTIKNVCDVFIPLNGLGILPVSNQTIGLLGAISSLMGLLP 212

Query: 246 L-WPR 249
           L +PR
Sbjct: 213 LVYPR 217



ref|XP_324159.1| hypothetical protein [Neurospora crassa]
gb|EAA31192.1| hypothetical protein [Neurospora crassa]
(234 aa)

Score: 46 bits (109), Expect: 0.000973128
Length: 241, Idn/Pos/Gap = 68/98/30 (28%/40%/12%)

Query:  12 LATTDGRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFRLA  71
           +ATT GRDK+ RL+Q+ A+F    Y   L++  +    + Q   T+       +K F L 
Sbjct:  19 VATTVGRDKLLRLLQYFARF----YAWYLLRTNKPASAI-QPWETM-------KKQFGLV  66

Query:  72 RGLNVLAKYWNHQRTTKGGTLELIFGTPILQLLA---DLGLFCYFGFDHLVWLYRTGLFL 128
           R +    K   H +       +   G PIL+ LA    LG   Y  FD    L  TG+  
Sbjct:  67 RKVMRAGKNVEHIKAAAVAA-DSKNGDPILRYLAVGRQLGYAGYLTFDLGTLLDATGIRK 125

Query: 129 EPPGQKRARFWGRCAGYSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSISALAATA 188
               ++ AR   R     L  S +A      Y LW +  R+ R D K  +     + A  
Sbjct: 126 TESAKRLARESQRFWVMGLSCSVIAQ----AYTLWRLRQREARVDRKEGE---GVVEAKR 178

Query: 189 LEPERPPPGSFETGVLARAVRYGCDILVGLNMAEPGQHSQTLVGAAGVLSSVLQLAQLWP 248
           +E ER       T  L       CD+ V L+          +VG AG LSS+L +   W 
Sbjct: 179 IEVERAASRIQLTSDL-------CDLTVPLSALAWVNFDDGIVGLAGTLSSLLGIYTQWK 231

Query: 249 R 249
           +
Sbjct: 232 K 232



emb|CAD41517.3| OSJNBb0020O11.14 [Oryza sativa (japonica cultivar-group)]
ref|XP_473309.1| OSJNBb0020O11.14 [Oryza sativa (japonica cultivar-group)]
(222 aa)

Score: 45 bits (107), Expect: 0.00153982
Length: 243, Idn/Pos/Gap = 64/98/41 (26%/40%/16%)

Query:  12 LATTDGRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFRLA  71
           LA  DG DK+ +  Q+ +K                 P LA +A   E      RK FR  
Sbjct:  14 LAKRDGIDKLVKTFQYVSKLAHWAAES-------SSPGLAGRAKNWETSAGLSRKAFRTG  66

Query:  72 RGLNVLAKYWNHQRTTKGGTLELIFGTPILQLLADLGLFCYFGFDHLVWLYRTGLFLEPP 131
           R L  L    N  R   G      FG   L +LA+ G   YF FDH  WL R G+ L+  
Sbjct:  67 RFLTGL----NGLRRAPGE-----FGA--LAVLANAGEMVYFFFDHFTWLSRVGV-LDAW 114

Query: 132 GQKRARF---WGRCAGYSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSISALAATA 188
             +R  F   +G   GY   +      A+ +  +   L ++R+   +G KD    +    
Sbjct: 115 LARRMSFISAFGESVGYVFFI------AMDLIMIRRGLRQERKLLREGGKDKDKEVKKIR 168

Query: 189 LEPERPPPGSFETGVLARAVRYGCDILVGLNMAEPG---QHSQTLVGAAGVLSSVLQLAQ 245
           ++            ++A A     D+++G+   EP     H+ TL G +G++S+     +
Sbjct: 169 MDR--------VMRLMATAANVA-DLVIGIADIEPNPFCNHAVTL-GISGLVSAWAGWYR 218

Query: 246 LWP 248
            WP
Sbjct: 219 NWP 221



ref|NP_445939.1| peroxisomal biogenesis factor 11A [Rattus norvegicus]
emb|CAA11838.1| putative peroxisomal coatomer receptor [Rattus norvegicus]
sp|O70597|PX11A_RAT Peroxisomal membrane protein 11A (Peroxin-11A) (Peroxisomal biogenesis factor 11A) (PEX11alpha) (Pex11palpha) (RnPEX11p) (28 kDa peroxisomal integral membrane protein) (PMP28) (Peroxisomal membrane protein 26) (Pmp26p) (Peroxisomal coatomer receptor)
(246 aa)

Score: 44 bits (103), Expect: 0.00463225
Length: 249, Idn/Pos/Gap = 66/97/38 (26%/38%/15%)

Query:  11 VLATTDGRDKVYRLVQFTAKFVRGPYTELLIKDPERVPLLAQKALTLELVLADGRKLFRL  70
           V   + GRD+++R  Q     +R      L++       +  K   LE  ++ GRK FRL
Sbjct:   7 VANQSQGRDRLFRATQHACMLLR-----YLLESKAGKEAVVTKLKNLETSVSTGRKWFRL  61

Query:  71 ARGLNVLAKYWNHQRTTKGGTLELIFGTPILQL-LADLGLFCYFGFDHLVWLYRTGLFLE 129
               NVL      +++ +   L      P L L LA+L    Y+  D ++W    GL   
Sbjct:  62 G---NVLHAIQATEQSIQATDL-----VPRLCLTLANLNRVVYYICDTVLWAKSVGL--- 110

Query: 130 PPGQKRARFWGRCAG--YSLLLSSLASFALYVYQLWSILNRKRRSDEKGAKDSISALAAT 187
             G  R ++  R A   Y  LL SL      V      + R R   EK + D      A 
Sbjct: 111 TSGINREKWQMRAARHYYYFLLLSLVRDLYEVLLHMGQVARDRAKREKSSGDPPKYSVAN 170

Query: 188 -------------ALEPERPPPGSFETGVLARAVRYGCDILVGLNMAEPGQHSQTLVGAA 234
                            +R PP   +T      V+  CDIL+ LN     + +  +VG  
Sbjct: 171 EESEWLQSFLLLLFQSLKRNPPLFLDT------VKNFCDILIPLNQLGIYKSNLGVVGFG 224

Query: 235 GVLSSVLQL 243
           G++SSV  L
Sbjct: 225 GLVSSVAGL 233