BLAST output

CMP294C (492 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)


		26S protease subunit regulatory subunit 6a, putative [Plasmodium chabaudi]
		PREDICTED: similar to PSMC3 protein [Canis familiaris]
		26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1)
		Tat binding protein like protein [Brassica rapa]
		26S proteasome AAA-ATPase subunit RPT5a [Arabidopsis thaliana]
		PSMC3 protein [Homo sapiens]
		PSMC3 protein [Homo sapiens]
		ENSANGP00000007334 [Anopheles gambiae str. PEST]
		26S proteasome AAA-ATPase subunit RPT5a [Arabidopsis thaliana]
		19S proteasome regulatory complex subunit S6A [Arabidopsis thaliana]
		26S proteasome regulatory subunit, S6a like AAA ATpase [Cryptosporidium parvum]
		26S protease subunit regulatory subunit 6a, putative [Plasmodium falciparum 3D7]
		26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1)
		PREDICTED: similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) [Gallus gallus]
		similar to CG10370-PA [Apis mellifera]
		26S proteasome regulatory particle triple-A ATPase subunit5a [Oryza sativa (japonica cultivar-group)]
		proteasome (prosome, macropain) 26S subunit, ATPase, 3 [synthetic construct]
		PSMC3 [Homo sapiens]
		hypothetical protein [Gallus gallus]
		Similar to probable Mg-dependent ATPase (pir\|S56671). ESTs gb\|T46782,gb\|AA04798 come from this gene. [Arabidopsis thaliana]
		Proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Xenopus tropicalis]
		At1g09100/F7G19_2 [Arabidopsis thaliana]
		proteasome 26S ATPase subunit 3 variant [Homo sapiens]
		Psmc3-prov protein [Xenopus laevis]
		26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50)
		putative 26S proteasome regulatory particle triple-A ATPase subunit5a [Oryza sativa (japonica cultivar-group)]
		CG10370-PA [Drosophila melanogaster]
		GA10280-PA [Drosophila pseudoobscura]
		Mg-dependent ATPase 1 [Lycopersicon esculentum]
		Proteasome regulatory particle, atpase-like protein 5 [Caenorhabditis elegans]
		26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA)
		Proteasome (prosome, macropain) 26S subunit, ATPase 3 [Rattus norvegicus]
		tat binding protein-1 (tbp-1)
		proteasome (prosome, macropain) 26S subunit, ATPase 3 [Rattus norvegicus]
		MGC53343 protein [Xenopus laevis]
		26S protease subunit regulatory subunit 6a [Cryptosporidium hominis]
		Hypothetical protein CBG12876 [Caenorhabditis briggsae]
		Proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Danio rerio]
		TBP10 protein [Xenopus laevis]
		proteasome (prosome, macropain) 26S subunit, ATPase 3 [Mus musculus]
		26s protease regulatory subunit 6a (tat-binding protein homolog 1) (tbp-1). [baker's yeast [Plasmodium yoelii yoelii]
		Tat binding protein 1, TBP-1=transcriptional activator [human, Peptide, 439 aa]
		putative 26S protease regulatory subunit 6A [Toxoptera citricida]
		Tat-binding protein-1 [Drosophila melanogaster]
		unnamed protein product [Tetraodon nigroviridis]
		hypothetical protein DDB0186002 [Dictyostelium discoideum]
		ENSANGP00000019796 [Anopheles gambiae str. PEST]
		PREDICTED: similar to PSMC3 protein [Pan troglodytes]
		conserved hypothetical protein [Gibberella zeae PH-1]
		unnamed protein product [Mus musculus]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		SPAC3A11.12c [Schizosaccharomyces pombe]
		likely 26S proteasome regulatory particle ATPase Rpt5p [Candida albicans SC5314]
		probable 26S proteasome regulatory particle chain RPT5 [Neurospora crassa]
		hypothetical protein CNBM1410 [Cryptococcus neoformans var. neoformans B-3501A]
		unnamed protein product [Debaryomyces hansenii CBS767]
		AER254Wp [Ashbya gossypii ATCC 10895]
		YTA1 [Saccharomyces cerevisiae]
		conserved hypothetical protein [Aspergillus nidulans FGSC A4]
		TBP6 protein [Xenopus laevis]
		26S protease regulatory subunit, putative [Entamoeba histolytica HM-1:IMSS]
		26S protease subunit regulatory subunit 6a, putative [Plasmodium berghei]
		PREDICTED: similar to PSMC3 protein, partial [Bos taurus]
		proteasome regulatory ATPase subunit 5 [Trypanosoma brucei]
		putative 26S proteasome regulatory particle triple-A ATPase subunit5a [Oryza sativa (japonica cultivar-group)]
		proteasome regulatory ATPase subunit 5 [Trypanosoma brucei]
		26S PROTEASOME REGULATORY SUBUNIT 6A (TAT-BINDING PROTEIN 1) [Encephalitozoon cuniculi GB-M1]
		26S protease regulatory SU 6A [Guillardia theta]
		OSJNBa0019J05.17 [Oryza sativa (japonica cultivar-group)]
		PREDICTED: similar to protease (prosome, macropain) 26S subunit, ATPase 1 [Pan troglodytes]
		26s protease regulatory subunit [Entamoeba histolytica HM-1:IMSS]
		proteasome regulatory AAA-ATPase [Methanocaldococcus jannaschii DSM 2661]
		GLP_254_8066_6561 [Giardia lamblia ATCC 50803]
		26S protease regulatory subunit [Aeropyrum pernix K1]
		Proteasome 26S ATPase subunit 1 [Homo sapiens]
		26S protease regulatory subunit 4 [Archaeoglobus fulgidus DSM 4304]
		hypothetical protein LOC506238 [Bos taurus]
		26S protease (S4) regulatory subunit
		peptidase (prosome, macropain) 26S subunit, ATPase 1 [Rattus norvegicus]
		26S proteasome regulatory chain 4 [validated] - human
		GA18789-PA [Drosophila pseudoobscura]
		unnamed protein product [Tetraodon nigroviridis]
		26S proteasome regulatory subunit 4, putative [Plasmodium falciparum 3D7]
		Proteasome 26S ATPase subunit 1 [Homo sapiens]
		ENSANGP00000017106 [Anopheles gambiae str. PEST]
		proteasome 26S ATPase subunit 1 variant [Homo sapiens]
		CG5289-PA [Drosophila melanogaster]
		26S ATPase complex subunit 4 [Gallus gallus]
		P26s4 [Drosophila melanogaster]
		novel protein similar to proteasome (prosome, macropain) 26S subunit ATPase 1 (psmc1) [Danio rerio]
		26S proteasome subunit 4-like protein [Plasmodium yoelii yoelii]
		Pros26.4-prov protein [Xenopus laevis]
		Proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Danio rerio]
		ATP-dependent 26S proteasome regulatory subunit [Methanopyrus kandleri AV19]
		Hypothetical protein CBG09267 [Caenorhabditis briggsae]
		proteasome-activating nucleotidase (PAN) [Methanococcus maripaludis S2]
		Proteasome regulatory particle, atpase-like protein 2 [Caenorhabditis elegans]
		hypothetical protein DDB0202018 [Dictyostelium discoideum]
		26S PROTEASOME REGULATORY SUBUNIT 8 [Encephalitozoon cuniculi GB-M1]
		unnamed protein product [Candida glabrata CBS138]
		26S proteasome regulatory particle triple-A ATPase subunit2b [Oryza sativa (japonica cultivar-group)]
		26S proteasome subunit P45 family protein [Entamoeba histolytica HM-1:IMSS]
		RPT2 [Saccharomyces cerevisiae]
		Hypothetical protein F56F11.4b [Caenorhabditis elegans]
		hypothetical protein F56F11.4 - Caenorhabditis elegans
		26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2)
		probable proteasome regulatory ATPase subunit 2 [Leishmania major]
		26S proteasome regulatory subunit 4 homolog [Oryza sativa (japonica cultivar-group)]
		26S proteasome subunit 4-like protein [Brassica napus]
		AEL011Wp [Ashbya gossypii ATCC 10895]
		26S proteasome subunit 4-like protein [Arabidopsis thaliana]
		putative 26S proteasome subunit 4 [Arabidopsis thaliana]
		26S proteasome AAA-ATPase subunit RPT2a [Arabidopsis thaliana]
		tat binding protein [Triticum aestivum]
		ATPase
		26S proteasome regulatory subunit S4 like AAA ATpase [Cryptosporidium parvum]
		At2g20140/T2G17.6 [Arabidopsis thaliana]
		Hypothetical protein F56F11.4a [Caenorhabditis elegans]
		putative 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza sativa (japonica cultivar-group)]
		Hypothetical protein CBG20343 [Caenorhabditis briggsae]
		Proteasome-activating nucleotidase (Proteasome regulatory subunit)
		26S proteasome subunit 4 [Arabidopsis thaliana]
		PREDICTED P0544H11.38 gene product [Oryza sativa (japonica cultivar-group)]
		unknown [Schistosoma japonicum]
		26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana]
		hypothetical protein CNBE3010 [Cryptococcus neoformans var. neoformans B-3501A]
		26S proteasome AAA-ATPase subunit RPT6a-like protein [Arabidopsis thaliana]
		26S proteasome regulatory particle triple-A ATPase subunit5b [Oryza sativa (japonica cultivar-group)]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		PREDICTED: similar to proteasomal ATPase (SUG1) [Canis familiaris]
		unnamed protein product [Tetraodon nigroviridis]
		ATP-dependent 26S proteasome regulatory subunit [uncultured archaeon GZfos18C8]
		proteasome protein p45/SUG [imported] - rat (fragment)
		XSUG1 [Xenopus laevis]
		proteasome regulatory subunit, putative [Entamoeba histolytica HM-1:IMSS]
		At5g19990 [Arabidopsis thaliana]
		hypothetical protein LOC394988 [Xenopus tropicalis]
		Psmc5 protein [Mus musculus]
		put. 26S protease subunit [Sus scrofa]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		Zgc:92464 [Danio rerio]
		26S proteasome regulatory subunit IV [Tortula ruralis]
		proteasome (prosome, macropain) 26S subunit, ATPase, 5 [synthetic construct]
		likely proteasome regulatory particle ATPase Rpt2p [Candida albicans SC5314]
		for proteasomal ATPase (SUG1) [Rattus norvegicus]
		26S proteasome subunit p45 [Homo sapiens]
		probable transcription factor DdTBP2 - slime mold (Dictyostelium discoideum)
		PREDICTED: similar to for proteasomal ATPase (SUG1) [Gallus gallus]
		Hypothetical protein CBG11771 [Caenorhabditis briggsae]
		MGC80185 protein [Xenopus laevis]
		GA14216-PA [Drosophila pseudoobscura]
		Unknown (protein for MGC:79055) [Xenopus laevis]
		CG16916-PA [Drosophila melanogaster]
		ATP-dependent 26S protease regulatory subunit 4 [Methanothermobacter thermautotrophicus str. Delta H]
		26S proteasome regulatory subunit 8 [Pinus taeda]
		conserved hypothetical protein [Aspergillus nidulans FGSC A4]
		putative 26S protease regulatory subunit 4 [Pneumocystis carinii f. sp. carinii]
		hypothetical protein UM02562.1 [Ustilago maydis 521]
		26S proteasome regulatory subunit 4, putative [Plasmodium chabaudi]
		TAT-binding protein homolog [Matricaria chamomilla]
		unnamed protein product [Debaryomyces hansenii CBS767]
		probable 26S ATP/ubiquitin-dependent proteinase chain S4 [MIPS] [Neurospora crassa]
		Tcc1l8.3 [Trypanosoma cruzi]
		unnamed protein product [Mus musculus]
		putative 26S protease regulatory subunit 8 [Toxoptera citricida]
		26S proteasome subunit [Griffithsia japonica]
		26S proteasome AAA-ATPase subunit RPT1a [Arabidopsis thaliana]
		protein C10G11.8 [imported] - Caenorhabditis elegans
		CG1489-PA [Drosophila melanogaster]
		putative 26S proteasome regulatory subunit 4 [Sulfolobus acidocaldarius]
		proteasome 26S ATPase subunit 1 [Oreochromis mossambicus]
		GA13327-PA [Drosophila pseudoobscura]
		hypothetical protein MG05477.4 [Magnaporthe grisea 70-15]
		ENSANGP00000016050 [Anopheles gambiae str. PEST]
		ENSANGP00000023984 [Anopheles gambiae str. PEST]
		DUG [Drosophila melanogaster]
		26s protease regulatory subunit [Entamoeba histolytica HM-1:IMSS]
		ENSANGP00000017654 [Anopheles gambiae str. PEST]
		26S proteasome regulatory particle triple-A ATPase subunit1 [Oryza sativa (japonica cultivar-group)]
		26S proteasome subunit 7 [Prunus persica]
		Hypothetical protein Y49E10.1 [Caenorhabditis elegans]
		26S protease regulatory subunit 7 [Xenopus tropicalis]
		26S proteasome ATPase chain - spinach
		hypothetical protein [Pongo pygmaeus]
		probable 26S ATP/ubiquitin-dependent proteinase chain S4 [Neurospora crassa]
		CG9475-PB, isoform B [Drosophila melanogaster]
		26S proteasome ATPase subunit [Arabidopsis thaliana]
		thyroid receptor interactor
		similar to Oryza sativa (Rice). 26S proteasome regulatory particle triple-A ATPase subunit1 [Dictyostelium discoideum]
		ATP-dependent 26S proteasome regulatory subunit [uncultured archaeon GZfos26E7]
		tat-binding protein homolog [Plasmodium yoelii yoelii]
		26S proteasome ATPase [Plasmodium yoelii yoelii]
		likely 26S proteasome regulatory particle ATPase Rpt6p [Candida albicans SC5314]
		similar to ENSANGP00000023984 [Apis mellifera]
		26S PROTEASOME REGULATORY SUBUNIT 4 [Encephalitozoon cuniculi GB-M1]
		mts2 gene [Schizosaccharomyces pombe]
		26S proteasome RPT6a subunit [Dactylis glomerata]
		DEAD-box ATPase [Manduca sexta]
		Hypothetical protein C52E4.4 [Caenorhabditis elegans]
		likely 26S proteasome regulatory particle ATPase Rpt6p [Candida albicans SC5314]
		Unknown (protein for IMAGE:4681581) [Xenopus laevis]
		26S PROTEASOME REGULATORY SUBUNIT 7 [Encephalitozoon cuniculi GB-M1]
		proteasome regulatory ATPase subunit 2 [Trypanosoma brucei]
		RE01104p [Drosophila melanogaster]
		unknown [Homo sapiens]
		xMSS1 [Xenopus laevis]
		endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
		tat-binding protein homolog, putative [Plasmodium berghei]
		CG2241-PA [Drosophila melanogaster]
		18-56 protein
		hypothetical protein MG01380.4 [Magnaporthe grisea 70-15]
		tat-binding protein homolog [Plasmodium falciparum 3D7]
		conserved hypothetical protein [Aspergillus nidulans FGSC A4]
		ATP-dependent 26S proteinase regulatory subunit 4 homolog [Halobacterium sp. NRC-1]
		hypothetical protein CNBG1220 [Cryptococcus neoformans var. neoformans B-3501A]
		Similar to proteasome (prosome, macropain) 26S subunit, ATPase 2 [Danio rerio]
		hypothetical protein [Gallus gallus]
		similar to 26S protease regulatory subunit 7 (MSS1 protein) [Gallus gallus]
		proteasome-activating nucleotidase [Thermococcus kodakaraensis KOD1]
		Proteasome 26S ATPase subunit 4, isoform 2 [Homo sapiens]
		Hypothetical protein CBG23346 [Caenorhabditis briggsae]
		unnamed protein product [Debaryomyces hansenii CBS767]
		probable 26S protease subunit RPT6 [Neurospora crassa]
		ATP-dependent 26S protease regulatory subunit [Pyrococcus furiosus DSM 3638]
		proteasome 26S ATPase subunit 4 [Rattus norvegicus]
		Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 [synthetic construct]
		26S proteasome regulatory subunit [Cryptosporidium hominis]
		unnamed protein product [Mus musculus]
		PREDICTED: similar to proteasome 26S ATPase subunit 2; proteasome 26S subunit, ATPase, 2; mammalian suppressor of sgv-1 of yeast; protease 26S subunit 7 [Pan troglodytes]
		Tat binding protein 7, TBP-7=transcriptional activator [human, Peptide, 458 aa]
		PREDICTED: similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7) [Canis familiaris]
		26S proteasome subunit P45 family, putative [Plasmodium yoelii yoelii]
		Hypothetical protein C10G11.8 [Caenorhabditis elegans]
		tat-binding protein homolog - malaria parasite (Plasmodium falciparum)
		proteasome regulatory ATPase subunit 3 [Trypanosoma brucei]
		hypothetical protein CNBJ0160 [Cryptococcus neoformans var. neoformans B-3501A]
		hypothetical protein [Pongo pygmaeus]
		proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Homo sapiens]
		26S proteasome regulatory subunit S10b like AAA+ ATpase [Cryptosporidium parvum]
		26S proteasome regulatory complex ATPase RPT3 [Zea mays]
		26S protease regulatory subunit-like protein [Toxoptera citricida]
		hypothetical protein CNBJ2480 [Cryptococcus neoformans var. neoformans B-3501A]
		Psmc2 protein [Mus musculus]
		MGC68784 protein [Xenopus laevis]
		GA12266-PA [Drosophila pseudoobscura]
		26s protease regulatory subunit 8, probable [Cryptosporidium parvum]
		Proteasome (prosome, macropain) 26S subunit, ATPase 2 [Rattus norvegicus]
		unknown [Schistosoma japonicum]
		26S protease regulatory subunit S10B [Danio rerio]
		ENSANGP00000021987 [Anopheles gambiae str. PEST]
		Tat-binding protein homolog
		Proteasome-activating nucleotidase 2 (Proteasome regulatory subunit 2)
		Rpt3-prov protein [Xenopus tropicalis]
		Proteasome 26S ATPase subunit 4 [Mus musculus]
		proteasome (prosome, macropain) 26S subunit, ATPase 2 [Rattus norvegicus]
		26S proteasome regulatory particle triple-A ATPase subunit3 [Oryza sativa (japonica cultivar-group)]
		TAT-binding protein 1; 26S protein [Oncorhynchus mykiss]
		CG1341-PA [Drosophila melanogaster]
		ATPase homolog [Homo sapiens]
		putative 26S proteasome regulatory particle triple-A ATPase subunit3 [Oryza sativa (japonica cultivar-group)]
		putative 26S proteasome regulatory particle triple-A ATPase subunit4 [Oryza sativa (japonica cultivar-group)]
		hypothetical protein FG01605.1 [Gibberella zeae PH-1]
		26S proteasome regulatory particle triple-A ATPase subunit4b [Oryza sativa (japonica cultivar-group)]
		26S protease regulatory subunit [Pyrococcus horikoshii OT3]
		26S protease regulatory subunit 4 [Pyrococcus abyssi GE5]
		Proteasome-activating nucleotidase (Proteasome regulatory subunit)
		proteasome (prosome, macropain) 26S subunit, ATPase 2 [Mus musculus]
		26S proteasome regulatory subunit [Dermacentor variabilis]
		Psmc6 protein [Mus musculus]
		GA21817-PA [Drosophila pseudoobscura]
		unnamed protein product [Tetraodon nigroviridis]
		26S proteasome regulatory particle triple-A ATPase subunit4 [Oryza sativa (japonica cultivar-group)]
		CG7257-PA [Drosophila melanogaster]
		hypothetical protein LOC394968 [Xenopus tropicalis]
		Proteasome 26S ATPase subunit 4 isoform 1 [Danio rerio]
		26S proteasome regulatory subunit RPT2/S4 [Methanosarcina mazei Go1]
		AAA family ATPase [Sulfolobus solfataricus P2]
		Hypothetical protein CBG11069 [Caenorhabditis briggsae]
		26S protease regulatory SU 7 [Guillardia theta]
		PREDICTED: similar to Psmc6 protein [Rattus norvegicus]
		Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 [synthetic construct]
		Proteasome-activating nucleotidase (Proteasome regulatory subunit)
		proteasome-activating nucleotidase [Methanosarcina acetivorans C2A]
		proteasome 26S ATPase subunit 6 [Mus musculus]
		Psmc6 protein [Xenopus laevis]
		Hypothetical protein CBG04772 [Caenorhabditis briggsae]
		At5g58290 [Arabidopsis thaliana]
		hypothetical protein UM00622.1 [Ustilago maydis 521]
		26S proteasome subunit 8; Tat binding protein [Fagus sylvatica]
		26S proteasome AAA-ATPase subunit RPT3 [Cryptosporidium hominis]
		ATP-dependent 26S proteinase regulatory subunit 4 homolog [Halobacterium sp. NRC-1]
		sug1 [Saccharomyces cerevisiae]
		SUG1 [Saccharomyces cerevisiae]
		PREDICTED: similar to proteasome (prosome, macropain) 26S subunit, ATPase 2 [Canis familiaris]
		SUG1 gene
		CG3455-PA [Drosophila melanogaster]
		hypothetical protein NEQ186 [Nanoarchaeum equitans Kin4-M]
		POTATP1
		similar to Psmc6 protein [Gallus gallus]
		Psmc6 protein [Mus musculus]
		Hypothetical protein CBG09101 [Caenorhabditis briggsae]
		26S proteasome AAA-ATPase subunit, putative [Arabidopsis thaliana]
		unnamed protein product [Tetraodon nigroviridis]
		Putative 26S proteasome ATPase subunit [Arabidopsis thaliana]
		Psmc6 protein [Xenopus laevis]
		26S proteasome regulatory subunit 26b like AAA ATpase [Cryptosporidium parvum]
		probable 26S proteasome regulatory particle chain RPT1 [imported] - Neurospora crassa
		proteasome subunit p42 [Homo sapiens]
		proteasome-activating nucleotidase A; PanA; AAA subfamily ATPase; triple-A subfamily ATPase [Haloferax volcanii]
		Tat-binding protein alpha, DdTBP alpha=Tat-binding protein 1 homolog/26S protease subunit homolog [Dictyostelium discoideum, Peptide, 439 aa]
		hypothetical protein MG01581.4 [Magnaporthe grisea 70-15]
		GA17461-PA [Drosophila pseudoobscura]
		conserved hypothetical protein [Gibberella zeae PH-1]
		26S proteasome AAA-ATPase subunit RPT4a-like protein [Arabidopsis thaliana]
		26S proteasome regulatory complex subunit p42D [Drosophila melanogaster]
		Proteasome regulatory particle, atpase-like protein 3 [Caenorhabditis elegans]
		probable 26S proteasome regulatory subunit YTA3 [Neurospora crassa]
		26s proteasome subunit P45 family protein, putative [Entamoeba histolytica HM-1:IMSS]
		COG1222: ATP-dependent 26S proteasome regulatory subunit [Methanosarcina barkeri str. fusaro]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		ENSANGP00000017473 [Anopheles gambiae str. PEST]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		hypothetical protein DDB0186051 [Dictyostelium discoideum]
		proteasome-activating nucleotidase 2 [Haloarcula marismortui ATCC 43049]
		CG9475-PA, isoform A [Drosophila melanogaster]
		PREDICTED: similar to Psmc6 protein [Canis familiaris]
		similar to 26S proteasome subunit p45 [Homo sapiens]
		Hypothetical protein CBG23920 [Caenorhabditis briggsae]
		RE23388p [Drosophila melanogaster]
		Proteasome regulatory particle, atpase-like protein 4, isoform a [Caenorhabditis elegans]
		26S proteasome AAA-ATPase subunit RPT4a [Arabidopsis thaliana]
		26S proteinase regulatory subunit 7 - fission yeast (Schizosaccharomyces pombe)
		SPBC16C6.07c [Schizosaccharomyces pombe]
		26s proteasome aaa-ATPase subunit Rpt3, putative [Plasmodium falciparum 3D7]
		26S proteasome AAA-ATPase subunit RPT4a [Solanum tuberosum]
		unnamed protein product [Mus musculus]
		26S proteasome regulatory subunit T1 [Antonospora locustae]
		Proteasome regulatory particle, atpase-like protein 4, isoform b [Caenorhabditis elegans]
		Hypothetical protein CBG07004 [Caenorhabditis briggsae]
		proteasome 26S ATPase subunit 4 [Mus musculus]
		26s proteasome subunit P45 family protein, putative [Entamoeba histolytica HM-1:IMSS]
		COG1222: ATP-dependent 26S proteasome regulatory subunit [Methanococcoides burtonii DSM 6242]
		26s protease regulatory subunit s10b (p44) (conserved atpase domain protein 44). [thirteen-lined ground squirrel] [Plasmodium yoelii yoelii]
		Psmc6 protein [Mus musculus]
		26S proteasome regulatory subunit, putative [Plasmodium falciparum 3D7]
		likely 26S proteasome regulatory particle ATPase Rpt1p [Candida albicans SC5314]
		unnamed protein product [Candida glabrata CBS138]
		26S proteasome AAA-ATPase subunit [Guillardia theta]
		hypothetical protein UM04547.1 [Ustilago maydis 521]
		GA20215-PA [Drosophila pseudoobscura]
		unnamed protein product [Debaryomyces hansenii CBS767]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		hypothetical protein DDB0216230 [Dictyostelium discoideum]
		unknown [Schistosoma japonicum]
		26S proteasome regulatory subunit 7, putative [Plasmodium berghei]
		proteasome-activating nucleotidase B; PanB; AAA subfamily ATPase; triple-A subfamily ATPase [Haloferax volcanii]
		26S proteasome regulatory ATPase subunit 10b (S10b) [Manduca sexta]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		YTA3 [Saccharomyces cerevisiae]
		26S protease regulatory subunit 8 (TAT-binding protein homolog 10)
		similar to protease (prosome, macropain) 26S subunit, ATPase 1 [Mus musculus]
		ACR050Cp [Ashbya gossypii ATCC 10895]
		hypothetical protein CNBB1810 [Cryptococcus neoformans var. neoformans B-3501A]
		26S proteasome regulatory subunit 7, putative [Plasmodium chabaudi]
		AGL043Cp [Ashbya gossypii ATCC 10895]
		26S protease regulatory subunit [Leishmania major]
		Probable 26S protease subunit rpt4
		hypothetical protein UM03922.1 [Ustilago maydis 521]
		26s proteasome ATPase subunit, probable [Cryptosporidium parvum]
		26S proteasome regulatory subunit 7, putative [Plasmodium falciparum 3D7]
		hypothetical protein UM00833.1 [Ustilago maydis 521]
		26S PROTEASOME REGULATORY SUBUNIT 6 [Encephalitozoon cuniculi GB-M1]
		26S proteasome SU [Guillardia theta]
		PREDICTED: similar to proteasome 26S ATPase subunit 4 isoform 2 [Bos taurus]
		proteasome-like protein [Rhipicephalus appendiculatus]
		probable 26S proteasome regulatory particle chain RPT3 [Neurospora crassa]
		hypothetical protein MG00908.4 [Magnaporthe grisea 70-15]
		proteasome regulatory ATPase subunit 6 [Trypanosoma brucei]
		let1 [Schizosaccharomyces pombe]
		conserved hypothetical protein [Aspergillus nidulans FGSC A4]
		hypothetical protein FG01198.1 [Gibberella zeae PH-1]
		26s proteasome subunit P45 family protein, putative [Entamoeba histolytica HM-1:IMSS]
		GLP_49_27747_26542 [Giardia lamblia ATCC 50803]
		26S PROTEASOME REGULATORY SUBUNIT 10 [Encephalitozoon cuniculi GB-M1]
		PRS6_ASPNG 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG [Gibberella zeae PH-1]
		unnamed protein product [Candida glabrata CBS138]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		GLP_90_16591_17934 [Giardia lamblia ATCC 50803]
		proteasome regulatory ATPase subunit 4 [Trypanosoma brucei]
		COG1222: ATP-dependent 26S proteasome regulatory subunit [Methanosarcina barkeri str. fusaro]
		proteasome-activating nucleotidase 1 [Haloarcula marismortui ATCC 43049]
		PRS6_MANSE 26S PROTEASE REGULATORY SUBUNIT 6B (ATPASE MS73) [Ustilago maydis 521]
		unnamed protein product [Candida glabrata CBS138]
		26S proteasome subunit Rpt3 [Saccharomyces cerevisiae]
		COG1222: ATP-dependent 26S proteasome regulatory subunit [Methanococcoides burtonii DSM 6242]
		AFR394Wp [Ashbya gossypii ATCC 10895]
		PRS6_ASPNG 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG [Aspergillus nidulans FGSC A4]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		Yta2p; CAI: 0.21 [Saccharomyces cerevisiae]
		unnamed protein product [Debaryomyces hansenii CBS767]
		proteasome-activating nucleotidase [Methanosarcina acetivorans C2A]
		26S proteasome subunit
		likely 26S proteasome regulatory particle ATPase Rpt3p [Candida albicans SC5314]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		26S proteasome subunit P45 family protein, putative [Entamoeba histolytica HM-1:IMSS]
		SPCC576.10c [Schizosaccharomyces pombe]
		26S proteasome regulatory subunit RPT2/S4 [Methanosarcina mazei Go1]
		likely 26S proteasome regulatory particle ATPase Rpt4p [Candida albicans SC5314]
		unnamed protein product [Candida glabrata CBS138]
		26S proteasome SU [Guillardia theta]
		proteasome 26S ATPase subunit 5 variant [Homo sapiens]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		PREDICTED: similar to Psmc6 protein [Pan troglodytes]
		CRL13 [Saccharomyces cerevisiae]
		26S proteasome regulatory particle triple-A ATPase subunit1b [Oryza sativa (japonica cultivar-group)]
		Sug2p
		unnamed protein product [Debaryomyces hansenii CBS767]
		26S proteasome AAA-ATPase subunit [Guillardia theta]
		Psmc5 protein [Mus musculus]
		AAL113Wp [Ashbya gossypii ATCC 10895]
		GLP_70_13103_11571 [Giardia lamblia ATCC 50803]
		proteasome regulatory ATPase subunit 1 [Trypanosoma brucei]
		26S proteasome ATPase subunit [Pisum sativum]
		GLP_38_50730_51935 [Giardia lamblia ATCC 50803]
		PREDICTED: similar to conserved ATPase domain protein 44 [Pan troglodytes]
		GLP_574_180933_182105 [Giardia lamblia ATCC 50803]
		26S proteasome ATPase subunit S4 [Giardia intestinalis]
		AT28212p [Drosophila melanogaster]
		PREDICTED: similar to protease (prosome, macropain) 26S subunit, ATPase 1 [Pan troglodytes]
		YME1 protein [Nyctotherus ovalis]
		26S protease regulatory subunit [Amblyomma americanum]
		Unknown (protein for IMAGE:4160213) [Mus musculus]
		cell division protein [Anaplasma marginale str. St. Maries]
		COG0465: ATP-dependent Zn proteases [Ehrlichia canis str. Jake]
		cell division protein FtsH [Ehrlichia ruminantium str. Welgevonden]
		PREDICTED: similar to conserved ATPase domain protein 44, partial [Bos taurus]
		cell division control protein 48 (cdc48), AAA family [Methanocaldococcus jannaschii DSM 2661]
		cell division control protein 48, AAA family (cdc48-1) [Archaeoglobus fulgidus DSM 4304]
		cell division control protein (transitional endoplasmic reticulum ATPase) [Pyrococcus horikoshii OT3]
		COG0465: ATP-dependent Zn proteases [Geobacter metallireducens GS-15]
		ATPase of the AAA+ family [Pyrococcus abyssi GE5]
		cell division cycle protein 48 [Picrophilus torridus DSM 9790]
		cell division control protein 48, aaa family [Pyrococcus furiosus DSM 3638]
		CDC48 cell division cycle protein family member [Methanococcus maripaludis S2]
		COG0465: ATP-dependent Zn proteases [Magnetospirillum magnetotacticum MS-1]
		PREDICTED: similar to Psmc6 protein, partial [Bos taurus]
		cell division protein FtsH [Caulobacter crescentus CB15]
		hypothetical SAV protein [Sulfolobus tokodaii str. 7]
		AAA family ATPase [Sulfolobus solfataricus P2]
		AGR_L_2253p [Agrobacterium tumefaciens str. C58]
		metalloprotease [Agrobacterium tumefaciens str. C58]
		ATP-dependent Zn protease, HflB [Wolbachia endosymbiont strain TRS of Brugia malayi]
		cell division protein FtsH [Wolbachia endosymbiont of Drosophila simulans]
		PROBABLE ATP-DEPENDENT ZINC METALLOPEPTIDASE (CELL DIVISION FTSH) TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
		ATP-dependent metalloprotease FtsH [Dehalococcoides ethenogenes 195]
		tat-binding protein homolog, putative [Plasmodium chabaudi]
		putative 26S protease regulatory subunit 6B [Oryza sativa (japonica cultivar-group)]
		ATP-dependent Zn proteases [Thermoanaerobacter tengcongensis MB4]
		COG0465: ATP-dependent Zn proteases [Azotobacter vinelandii]
		COG0465: ATP-dependent Zn proteases [Rhodobacter sphaeroides 2.4.1]
		ATP-dependent metalloprotease FtsH [Silicibacter pomeroyi DSS-3]
		cell division protein FtsH [Geobacter sulfurreducens PCA]
		cell division protein FtsH [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
		cell division protein [Haemophilus influenzae Rd KW20]
		COG0465: ATP-dependent Zn proteases [Haemophilus influenzae R2866]
		transitional endoplasmic reticulum ATPase [Pyrococcus horikoshii OT3]
		Membrane ATP-dependent Zn proteases [Idiomarina loihiensis L2TR]
		cell division protein (ftsH) [Treponema pallidum subsp. pallidum str. Nichols]
		COG0465: ATP-dependent Zn proteases [Cytophaga hutchinsonii]
		cell division protein [Azoarcus sp. EbN1]
		COG0465: ATP-dependent Zn proteases [Haemophilus influenzae R2846]
		PREDICTED: similar to SPATA5 protein [Gallus gallus]
		CELL DIVISION PROTEIN FTSH [Brucella melitensis 16M]
		cell division protein FtsH [Thermotoga maritima MSB8]
		metalloprotease (cell division protein) FtsH [Rhodopseudomonas palustris CGA009]
		FtsH, cell division protein FtsH [Brucella abortus biovar 1 str. 9-941]
		metalloprotease (cell division protein) FtsH [Mesorhizobium loti MAFF303099]
		cell division protein FtsH [uncultured bacterium 106]
		AAA family ATPase [Sulfolobus acidocaldarius]
		FtsH [Pasteurella multocida subsp. multocida str. Pm70]
		Cdc48 cell division control protein 48, AAA family [Pyrococcus abyssi GE5]
		cell division protein ftsh [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
		COG0465: ATP-dependent Zn proteases [Methylobacillus flagellatus KT]
		cell division protein FtsH [Shewanella oneidensis MR-1]
		cell division protein [Clostridium perfringens str. 13]
		cell division protein FtsH [Buchnera aphidicola str. Sg (Schizaphis graminum)]
		hflB; ATP-dependent zinc metallopeptidase (cell division ftsh) transmembrane protein [Nitrosomonas europaea ATCC 19718]
		COG0465: ATP-dependent Zn proteases [Ralstonia metallidurans CH34]
		Zn metallo-peptidase, integral membrane cell division protein [Shigella flexneri 2a str. 301]
		ATP-binding protein
		Cell division protease ftsH
		COG0465: ATP-dependent Zn proteases [Thiobacillus denitrificans ATCC 25259]
		COG0465: ATP-dependent Zn proteases [Rhodospirillum rubrum]
		COG0465: ATP-dependent Zn proteases [Crocosphaera watsonii WH 8501]
		cell division protein FtsH [Wolbachia endosymbiont of Drosophila melanogaster]
		transitional endoplasmic reticulum ATPase [Aeropyrum pernix K1]
		COG0465: ATP-dependent Zn proteases [Mesorhizobium sp. BNC1]
		cell division protein FtsH [Brucella suis 1330]
		metalloprotease [Bradyrhizobium japonicum USDA 110]
		COG0465: ATP-dependent Zn proteases [Ralstonia eutropha JMP134]

emb|CAH82289.1| 26S protease subunit regulatory subunit 6a, putative [Plasmodium chabaudi]
(451 aa)

Score: 518 bits (1333), Expect: 2.01134e-145
Length: 485, Idn/Pos/Gap = 285/345/49 (58%/71%/10%)

Query:   7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV  66
           EEI   S   I  R  LI+ E++ L+ E  RL+ E +++ E++K+N EKI LN  LP+LV
Sbjct:  15 EEIEVLSNPEIRTRISLIDTEIKILKNEHTRLKNEYKNIQEKIKDNVEKIHLNKMLPYLV  74

Query:  67 AHVVEVLTPAALKRAPPSLTGPGTQSAPHAETALATQPNGSVSETQGEARNQRLGSGARG 126
           A+VVE L           L     +  P  E  L   PN + +   G         G R 
Sbjct:  75 ANVVESL----------DLQDDEDEQEPKDEYDLYDNPNSTNNTIYGNKSKSTPEEGFR- 123

Query: 127 GSDLINRSSGITSETQTPGAADHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVF 186
                                    D+DD              ++   +V+KTSTRQT+F
Sbjct: 124 -------------------------DIDD-------------EKRGKCMVIKTSTRQTIF 145

Query: 187 LPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDK 246
           LP+PGL++ SEL+PGDLVGVNKDSYLI++KLP EYD RVKA EV E+PTED++DIGGLDK
Sbjct: 146 LPVPGLIEASELKPGDLVGVNKDSYLIIDKLPPEYDNRVKAMEVIEKPTEDYSDIGGLDK 205

Query: 247 QIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG 306
           QIE+++EA+VLPM HK  FE++GIKPPKGVLM+GPPGTGKTLLARACA+QT ATFLKLAG
Sbjct: 206 QIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAG 265

Query: 307 TSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLEL 366
             LVQMFIGDGA++VRDAF LAK+KAP+IIFIDELDAIGTKRFDS+ SGDRE QRTMLEL
Sbjct: 266 PQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLEL 325

Query: 367 LNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKM 426
           LNQLDGF  ++ V+V+AATNRPD LD AL+RSGRLDRKIE PHP+E +RARIL+IHSRKM
Sbjct: 326 LNQLDGFSTDETVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKM 385

Query: 427 NVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           NVH DV++EELARSTDDFN A LKAVCVEAGM ALR     + HEDFI+GI +V +KKK 
Sbjct: 386 NVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFIEGITSVLSKKKS 445

Query: 487 SLNYY 491
           +LNY+
Sbjct: 446 TLNYF 450

ref|XP_533187.1| PREDICTED: similar to PSMC3 protein [Canis familiaris]
(902 aa)

Score: 512 bits (1319), Expect: 9.2627e-144
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 563 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 621

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 622 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 681

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 682 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 741

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 742 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 801

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 802 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 861

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 862 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 902


Score: 73 bits (178), Expect: 1.58773e-11
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct: 489 QDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 548

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct: 549 LPYLVSNVIELL 560

sp|O23894|PRS6A_BRACM 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1)
dbj|BAA22951.1| Tat binding protein 1 [Brassica rapa]
(424 aa)

Score: 496 bits (1278), Expect: 4.67981e-139
Length: 339, Idn/Pos/Gap = 259/295/1 (76%/87%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           DDAEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD   L+PGDLVGVNKDSYLI
Sbjct:  87 DDAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLI 145

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  FE++G++PP
Sbjct: 146 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPP 205

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+KAP
Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAP 265

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD 
Sbjct: 266 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 325

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E ARARIL+IHSRKMNVHPDV++EELARSTDDFN A LKAVC
Sbjct: 326 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVC 385

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 386 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 424


Score: 64 bits (156), Expect: 6.08743e-09
Length: 67, Idn/Pos/Gap = 31/48/0 (46%/71%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          +++   ST+ I +  RL+ENE+R L+ + +R   E  S  E++KEN+EKIKLN QLP+LV
Sbjct: 15 DQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLV 74

Query: 67 AHVVEVL 73
           ++VE+L
Sbjct: 75 GNIVEIL 81

dbj|BAB21595.1| Tat binding protein like protein [Brassica rapa]
(424 aa)

Score: 496 bits (1278), Expect: 4.67981e-139
Length: 339, Idn/Pos/Gap = 259/295/1 (76%/87%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           DDAEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD   L+PGDLVGVNKDSYLI
Sbjct:  87 DDAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLI 145

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  FE++G++PP
Sbjct: 146 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPP 205

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+KAP
Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAP 265

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD 
Sbjct: 266 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 325

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E ARARIL+IHSRKMNVHPDV++EELARSTDDFN A LKAVC
Sbjct: 326 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVC 385

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 386 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 424


Score: 63 bits (153), Expect: 1.4865e-08
Length: 67, Idn/Pos/Gap = 30/48/0 (44%/71%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          +++   ST+ I +  RL++NE+R L+ + +R   E  S  E++KEN+EKIKLN QLP+LV
Sbjct: 15 DQLASMSTEDIVRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLV 74

Query: 67 AHVVEVL 73
           ++VE+L
Sbjct: 75 GNIVEIL 81

gb|AAF64530.1| 26S proteasome AAA-ATPase subunit RPT5a [Arabidopsis thaliana]
gb|AAL32783.1| 26S proteasome AAA-ATPase subunit RPT5a [Arabidopsis thaliana]
gb|AAF22525.1| 26S proteasome AAA-ATPase subunit RPT5a [Arabidopsis thaliana]
ref|NP_187204.1| 26S proteasome AAA-ATPase subunit (RPT5a) [Arabidopsis thaliana]
(424 aa)

Score: 496 bits (1278), Expect: 4.92006e-139
Length: 339, Idn/Pos/Gap = 259/295/1 (76%/87%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           DDAEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD   L+PGDLVGVNKDSYLI
Sbjct:  87 DDAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLI 145

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  FE++G++PP
Sbjct: 146 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPP 205

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+KAP
Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAP 265

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD 
Sbjct: 266 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 325

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E ARARIL+IHSRKMNVHPDV++EELARSTDDFN A LKAVC
Sbjct: 326 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVC 385

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 386 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 424


Score: 63 bits (153), Expect: 1.4619e-08
Length: 67, Idn/Pos/Gap = 30/48/0 (44%/71%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          +++   ST+ I +  RL++NE+R L+ + +R   E  S  E++KEN+EKIKLN QLP+LV
Sbjct: 15 DQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLV 74

Query: 67 AHVVEVL 73
           ++VE+L
Sbjct: 75 GNIVEIL 81

gb|AAH08713.2| PSMC3 protein [Homo sapiens]
(491 aa)

Score: 495 bits (1275), Expect: 1.162e-138
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 152 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 210

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 211 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 270

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 271 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 330

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 331 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 390

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 391 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 450

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 451 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 491


Score: 71 bits (173), Expect: 7.43276e-11
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct:  78 QDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 137

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct: 138 LPYLVSNVIELL 149

gb|AAH73165.1| PSMC3 protein [Homo sapiens]
(485 aa)

Score: 495 bits (1274), Expect: 1.39613e-138
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 146 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 204

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 205 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 264

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 265 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 324

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 325 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 384

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 385 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 444

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 445 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 485


Score: 71 bits (173), Expect: 7.371e-11
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct:  72 QDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 131

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct: 132 LPYLVSNVIELL 143

gb|EAA06390.1| ENSANGP00000007334 [Anopheles gambiae str. PEST]
ref|XP_310465.1| ENSANGP00000007334 [Anopheles gambiae str. PEST]
(427 aa)

Score: 494 bits (1273), Expect: 1.85408e-138
Length: 336, Idn/Pos/Gap = 255/291/0 (75%/86%/0%)

Query: 157 EEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEK 216
           EED+GA    D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSYLILE 
Sbjct:  92 EEDDGAVVVLDSQRKGKCAVIKTSTRQTYFLPVIGLVDSDKLKPGDLVGVNKDSYLILET 151

Query: 217 LPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGV 276
           LP EYDARVKA EVDERPTE ++DIGGLDKQI+E+IEAVVLPMTHK  F+ +GI PPKGV
Sbjct: 152 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKDKFKNLGIHPPKGV 211

Query: 277 LMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSII 336
           L+YGPPGTGKTLLARACAAQTK+TFLKLAG  LVQMFIGDGA+LVRDAFALAK+K+P+II
Sbjct: 212 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKSPAII 271

Query: 337 FIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALM 396
           FIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF    D++V+AATNR DILD AL+
Sbjct: 272 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALL 331

Query: 397 RSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEA 456
           RSGRLDRKIEFPHP+E ARARI++IHSRKMNV PDV++EELARSTDDFN A  KAVCVEA
Sbjct: 332 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELARSTDDFNGAQCKAVCVEA 391

Query: 457 GMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           GM ALR     VIHEDF+D I  VQ+KKK +LNY+A
Sbjct: 392 GMIALRRSAVSVIHEDFMDAIMEVQSKKKANLNYFA 427


Score: 70 bits (172), Expect: 9.70748e-11
Length: 67, Idn/Pos/Gap = 32/52/0 (47%/77%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          EE+LR STD +  R RL++NE++ ++ E  R+  E+Q+ NE++K+N EKIK+N  LP+LV
Sbjct: 19 EEVLRMSTDELVSRTRLMDNEIKIMKSEVVRINHELQTQNEKIKDNTEKIKVNKTLPYLV 78

Query: 67 AHVVEVL 73
          ++V+E+L
Sbjct: 79 SNVIELL 85

gb|AAN15459.1| 26S proteasome AAA-ATPase subunit RPT5a [Arabidopsis thaliana]
(424 aa)

Score: 494 bits (1272), Expect: 2.52467e-138
Length: 339, Idn/Pos/Gap = 258/294/1 (76%/86%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           DDAEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD   L+PGDLVGVNKDSYLI
Sbjct:  87 DDAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLI 145

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  FE++G++PP
Sbjct: 146 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPP 205

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+KAP
Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAP 265

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFI E+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD 
Sbjct: 266 CIIFIYEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 325

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E ARARIL+IHSRKMNVHPDV++EELARSTDDFN A LKAVC
Sbjct: 326 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVC 385

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 386 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 424


Score: 63 bits (153), Expect: 1.32261e-08
Length: 67, Idn/Pos/Gap = 30/48/0 (44%/71%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          +++   ST+ I +  RL++NE+R L+ + +R   E  S  E++KEN+EKIKLN QLP+LV
Sbjct: 15 DQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLV 74

Query: 67 AHVVEVL 73
           ++VE+L
Sbjct: 75 GNIVEIL 81

gb|AAD46145.1| 19S proteasome regulatory complex subunit S6A [Arabidopsis thaliana]
(424 aa)

Score: 494 bits (1272), Expect: 2.67652e-138
Length: 339, Idn/Pos/Gap = 258/294/1 (76%/86%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           DDAEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD   L+PGDLVGVNKDSYLI
Sbjct:  87 DDAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLI 145

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  FE++G++PP
Sbjct: 146 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPP 205

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+KAP
Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAP 265

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD 
Sbjct: 266 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 325

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E ARARIL+IHSRKMNVHPDV +EELARSTDDF+ A LKAVC
Sbjct: 326 ALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVHFEELARSTDDFHGAQLKAVC 385

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 386 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 424


Score: 63 bits (153), Expect: 1.42576e-08
Length: 67, Idn/Pos/Gap = 30/48/0 (44%/71%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          +++   ST+ I +  RL++NE+R L+ + +R   E  S  E++KEN+EKIKLN QLP+LV
Sbjct: 15 DQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLV 74

Query: 67 AHVVEVL 73
           ++VE+L
Sbjct: 75 GNIVEIL 81

gb|EAK88919.1| 26S proteasome regulatory subunit, S6a like AAA ATpase [Cryptosporidium parvum]
(461 aa)

Score: 493 bits (1270), Expect: 4.19997e-138
Length: 342, Idn/Pos/Gap = 248/295/1 (72%/86%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D  D +E+EG   E D ++    +V+KTS+RQTVFLP+ GLV  +EL+PGDLVGVNKDSY
Sbjct: 120 DFSDEQENEGEGMEFDGDKNDKCMVIKTSSRQTVFLPVIGLVPENELKPGDLVGVNKDSY 179

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LIL+KLP EYD+RVKA EVDERP E+++DIGGLDKQI+E++EA+VLPMTHK  FE++GIK
Sbjct: 180 LILDKLPPEYDSRVKAMEVDERPMEEYSDIGGLDKQIQELVEAIVLPMTHKERFEKIGIK 239

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA++VRDAF +A++K
Sbjct: 240 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKMVRDAFEIAREK 299

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIG KRFDS+ SGDRE QRTMLELLNQLDGF  +D V+V+AATNRPD L
Sbjct: 300 APSIIFIDELDAIGMKRFDSEHSGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRPDTL 359

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVH-PDVSYEELARSTDDFNAAMLK 450
           D AL+RSGRLDRK+E PHP+E AR+RIL+IHSRKMNV   DV+++EL+RSTDDFN A LK
Sbjct: 360 DPALLRSGRLDRKVELPHPNEEARSRILQIHSRKMNVDLNDVNFQELSRSTDDFNGAQLK 419

Query: 451 AVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           AVCVEAGM ALR    ++ HED+++GIAAV AKKK  L+Y++
Sbjct: 420 AVCVEAGMTALRRGATILCHEDYVEGIAAVLAKKKSPLSYFS 461


Score: 64 bits (156), Expect: 6.89904e-09
Length: 67, Idn/Pos/Gap = 30/45/0 (44%/67%/0%)

Query:   7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV  66
           E +   S   +  R RL++ E+R ++ E  RL+ E+  +NER++ N EKIKLN QLP+LV
Sbjct:  53 ESVKTLSVSELQSRIRLLDGEIRLMKSESNRLKHELNQMNERIRSNTEKIKLNKQLPYLV 112

Query:  67 AHVVEVL  73
           A++VE L
Sbjct: 113 ANIVESL 119

ref|NP_701174.1| 26S protease subunit regulatory subunit 6a, putative [Plasmodium falciparum 3D7]
gb|AAN35898.1| 26S protease subunit regulatory subunit 6a, putative [Plasmodium falciparum 3D7]
(439 aa)

Score: 493 bits (1269), Expect: 4.72039e-138
Length: 328, Idn/Pos/Gap = 243/289/0 (74%/88%/0%)

Query: 164 QESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDA 223
           ++ D  ++   +V+KTSTRQT+FLP+PGL+D SEL+PGDLVGVNKDSYLI++KLP+EYD 
Sbjct: 111 RDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDN 170

Query: 224 RVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPG 283
           RVKA EV E+P+ED++DIGGLDKQIE+++EA+VLPM HK  FE++GIKPPKGVLM+GPPG
Sbjct: 171 RVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPG 230

Query: 284 TGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDA 343
           TGKTLLARACA+QT ATFLKLAG  LVQMFIGDGA++VRDAF LAK+KAP+IIFIDELDA
Sbjct: 231 TGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDA 290

Query: 344 IGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDR 403
           IGTKRFDS+ SGDRE QRTMLELLNQLDGF  +D V+V+AATNRPD LD AL+RSGRLDR
Sbjct: 291 IGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDR 350

Query: 404 KIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRA 463
           KIE PHP+E +RARIL+IHSRKMNVH DV++EELARSTDDFN A LKAVCVEAGM ALR 
Sbjct: 351 KIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRR 410

Query: 464 DRKVVIHEDFIDGIAAVQAKKKMSLNYY 491
               + HEDF++GI +V +KKK +LNY+
Sbjct: 411 GATEIDHEDFVEGITSVLSKKKSTLNYF 438


Score: 55 bits (131), Expect: 5.51224e-06
Length: 58, Idn/Pos/Gap = 27/39/0 (46%/67%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVV 70
          S   I  R  LI+ E++ L+ E  RL+ E ++L E++K+N EKI LN  LP+LVA+VV
Sbjct: 21 SNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKIHLNKMLPYLVANVV 78

sp|P46465|PRS6A_ORYSA 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1)
dbj|BAA04614.1| rice homologue of Tat binding protein [Oryza sativa (japonica cultivar-group)]
(429 aa)

Score: 493 bits (1268), Expect: 7.85272e-138
Length: 339, Idn/Pos/Gap = 256/296/1 (75%/87%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           D+AEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD  +L+PGDLVGVNKDSYLI
Sbjct:  92 DEAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLI 150

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  F+++GI+PP
Sbjct: 151 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPP 210

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+K+P
Sbjct: 211 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 270

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD 
Sbjct: 271 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 330

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E ARARIL+IHSRKMNV+PDV++EELARSTDDFN A LKAVC
Sbjct: 331 ALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVC 390

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 391 VEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYYA 429


Score: 64 bits (156), Expect: 5.41631e-09
Length: 61, Idn/Pos/Gap = 31/46/0 (50%/75%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV 72
          ST+ I +  RL++NE R L+ E +R   E++S  E++KEN+EKIKLN QLP+LV ++VE+
Sbjct: 26 STENIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEI 85

Query: 73 L 73
          L
Sbjct: 86 L 86

ref|XP_421107.1| PREDICTED: similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) [Gallus gallus]
(385 aa)

Score: 492 bits (1267), Expect: 8.25585e-138
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  46 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 104

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 105 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 164

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 165 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 224

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 225 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 284

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 285 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 344

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 345 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 385


Score: 45 bits (106), Expect: 0.00422425
Length: 43, Idn/Pos/Gap = 19/34/0 (44%/79%/0%)

Query: 31 LRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEVL 73
          ++ E  R+  E+Q++ +++KEN EKIK+N  LP+LV++V+E+L
Sbjct:  1 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELL 43

ref|XP_392722.1| similar to CG10370-PA [Apis mellifera]
(428 aa)

Score: 491 bits (1265), Expect: 1.48053e-137
Length: 341, Idn/Pos/Gap = 252/292/0 (73%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D  +  E++GA  + DA ++    V+KTSTRQT FLP+ GLVD   L+PGDLVGVNKDSY
Sbjct:  88 DPQNIGEEDGAVVDLDAQRKGKCAVIKTSTRQTYFLPVIGLVDAEALKPGDLVGVNKDSY 147

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           L+LE LP EYDARVKA EVDERPTE ++DIGGLDKQI+E+IEAVVLPMTHK  FE +GI+
Sbjct: 148 LVLETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFENLGIQ 207

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAG  LVQMFIGDGA+LVRDAF+LAK+K
Sbjct: 208 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEK 267

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           AP+IIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF    D++V+AATNR DIL
Sbjct: 268 APAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDIL 327

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFPHP+E ARARI++IHSRKMN+ PDV++EEL+RSTDDFN A  KA
Sbjct: 328 DPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNMSPDVNFEELSRSTDDFNGAQCKA 387

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR +   V HED ++ I  VQAKKK +LNYYA
Sbjct: 388 VCVEAGMIALRRNATAVTHEDLMEAINEVQAKKKANLNYYA 428


Score: 70 bits (170), Expect: 1.66972e-10
Length: 72, Idn/Pos/Gap = 32/53/0 (44%/73%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          E  + E++ R STD I  R RL++NE++ ++ E  R+  E+Q+ N+++KEN EKIK+N  
Sbjct: 14 EEALGEDVWRMSTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 73

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 74 LPYLVSNVIELL 85

dbj|BAD36042.1| 26S proteasome regulatory particle triple-A ATPase subunit5a [Oryza sativa (japonica cultivar-group)]
dbj|BAB78492.1| 26S proteasome regulatory particle triple-A ATPase subunit5a [Oryza sativa (japonica cultivar-group)]
(429 aa)

Score: 491 bits (1265), Expect: 1.53078e-137
Length: 339, Idn/Pos/Gap = 256/296/1 (75%/87%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           D+AEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD  +L+PGDLVGVNKDSYLI
Sbjct:  92 DEAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLI 150

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  F+++GI+PP
Sbjct: 151 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPP 210

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+K+P
Sbjct: 211 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 270

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD 
Sbjct: 271 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 330

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E ARARIL+IHSRKMNV+PDV++EELARSTDDFN A LKAVC
Sbjct: 331 ALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVC 390

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 391 VEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYYA 429


Score: 64 bits (156), Expect: 6.18987e-09
Length: 61, Idn/Pos/Gap = 31/46/0 (50%/75%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV 72
          ST+ I +  RL++NE R L+ E +R   E++S  E++KEN+EKIKLN QLP+LV ++VE+
Sbjct: 26 STEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEI 85

Query: 73 L 73
          L
Sbjct: 86 L 86

gb|AAV38530.1| proteasome (prosome, macropain) 26S subunit, ATPase, 3 [synthetic construct]
gb|AAX43250.1| proteasome 26S subunit 3 [synthetic construct]
(405 aa)

Score: 491 bits (1265), Expect: 1.62285e-137
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  65 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 123

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 124 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 183

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 184 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 243

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 244 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 303

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 304 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 363

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 364 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404


Score: 61 bits (147), Expect: 6.50952e-08
Length: 61, Idn/Pos/Gap = 27/48/0 (44%/78%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV 72
          ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP+LV++V+E+
Sbjct:  2 STEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEL 61

Query: 73 L 73
          L
Sbjct: 62 L 62

emb|CAG33012.1| PSMC3 [Homo sapiens]
(404 aa)

Score: 491 bits (1264), Expect: 1.94983e-137
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  65 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 123

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 124 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 183

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 184 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 243

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 244 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 303

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 304 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 363

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 364 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404


Score: 61 bits (147), Expect: 6.73045e-08
Length: 61, Idn/Pos/Gap = 27/48/0 (44%/78%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV 72
          ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP+LV++V+E+
Sbjct:  2 STEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEL 61

Query: 73 L 73
          L
Sbjct: 62 L 62

emb|CAG32356.1| hypothetical protein [Gallus gallus]
(422 aa)

Score: 491 bits (1263), Expect: 2.76815e-137
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  83 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 141

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 142 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 201

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 202 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 261

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 262 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 321

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 322 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 381

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 382 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 422


Score: 71 bits (173), Expect: 5.93351e-11
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          E G+ EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct:  9 EDGVGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 68

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 69 LPYLVSNVIELL 80

gb|AAB70397.1| Similar to probable Mg-dependent ATPase (pir|S56671). ESTs gb|T46782,gb|AA04798 come from this gene. [Arabidopsis thaliana]
pir||C86223 hypothetical protein [imported] - Arabidopsis thaliana
sp|O04019|PRS6A_ARATH 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1)
(419 aa)

Score: 490 bits (1262), Expect: 3.0853e-137
Length: 339, Idn/Pos/Gap = 257/293/1 (75%/86%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           DDAEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD   L+PGDLVGVNKDSYLI
Sbjct:  82 DDAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLI 140

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  FE++GI+PP
Sbjct: 141 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPP 200

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+K+P
Sbjct: 201 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSP 260

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  +D ++V+AATNR DILD 
Sbjct: 261 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 320

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E AR RIL+IHSRKMNV+ DV++EELARSTDDFN A LKAVC
Sbjct: 321 ALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVC 380

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 381 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 419


Score: 66 bits (161), Expect: 1.57545e-09
Length: 67, Idn/Pos/Gap = 30/51/0 (44%/76%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          +++   +TD I + +RL+ NE+R L+ E +R   +++S+ E++KEN+EKIKLN QLP+LV
Sbjct: 10 DQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLV 69

Query: 67 AHVVEVL 73
           ++VE+L
Sbjct: 70 GNIVEIL 76

gb|AAH75596.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Xenopus tropicalis]
ref|NP_001006786.1| proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Xenopus tropicalis]
(423 aa)

Score: 490 bits (1262), Expect: 3.21674e-137
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  84 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 142

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 143 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 202

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 203 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 262

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 263 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 322

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 323 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 382

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 383 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 423


Score: 69 bits (168), Expect: 2.7777e-10
Length: 70, Idn/Pos/Gap = 31/55/0 (44%/78%/0%)

Query:  4 GIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLP 63
          G+ EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP
Sbjct: 12 GLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLP 71

Query: 64 FLVAHVVEVL 73
          +LV++V+E+L
Sbjct: 72 YLVSNVIELL 81

gb|AAM70522.1| At1g09100/F7G19_2 [Arabidopsis thaliana]
ref|NP_172384.1| 26S protease regulatory subunit 6A, putative [Arabidopsis thaliana]
gb|AAL06548.1| At1g09100/F7G19_2 [Arabidopsis thaliana]
gb|AAK91439.1| At1g09100/F7G19_2 [Arabidopsis thaliana]
(423 aa)

Score: 490 bits (1262), Expect: 3.38188e-137
Length: 339, Idn/Pos/Gap = 257/293/1 (75%/86%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           DDAEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD   L+PGDLVGVNKDSYLI
Sbjct:  86 DDAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLI 144

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  FE++GI+PP
Sbjct: 145 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPP 204

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+K+P
Sbjct: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSP 264

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  +D ++V+AATNR DILD 
Sbjct: 265 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 324

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E AR RIL+IHSRKMNV+ DV++EELARSTDDFN A LKAVC
Sbjct: 325 ALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVC 384

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 385 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 423


Score: 66 bits (161), Expect: 1.57545e-09
Length: 67, Idn/Pos/Gap = 30/51/0 (44%/76%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          +++   +TD I + +RL+ NE+R L+ E +R   +++S+ E++KEN+EKIKLN QLP+LV
Sbjct: 14 DQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLV 73

Query: 67 AHVVEVL 73
           ++VE+L
Sbjct: 74 GNIVEIL 80

dbj|BAD96205.1| proteasome 26S ATPase subunit 3 variant [Homo sapiens]
(424 aa)

Score: 490 bits (1261), Expect: 4.20119e-137
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  85 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 143

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 144 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 203

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 204 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 263

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 264 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 323

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 324 DPALLRSGRLDRKIEFPTPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 383

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 384 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 424


Score: 70 bits (171), Expect: 1.26784e-10
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct: 11 QDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 70

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 71 LPYLVSNVIELL 82

gb|AAH54164.1| Psmc3-prov protein [Xenopus laevis]
(423 aa)

Score: 490 bits (1261), Expect: 4.76132e-137
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  84 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 142

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 143 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 202

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 203 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 262

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 263 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDIL 322

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 323 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 382

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 383 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 423


Score: 69 bits (168), Expect: 2.70904e-10
Length: 70, Idn/Pos/Gap = 31/55/0 (44%/78%/0%)

Query:  4 GIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLP 63
          G+ EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP
Sbjct: 12 GLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLP 71

Query: 64 FLVAHVVEVL 73
          +LV++V+E+L
Sbjct: 72 YLVSNVIELL 81

sp|P17980|PRS6A_HUMAN 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50)
ref|NP_002795.2| proteasome 26S ATPase subunit 3 [Homo sapiens]
(439 aa)

Score: 489 bits (1260), Expect: 5.26273e-137
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 100 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 158

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 159 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 218

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 219 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 278

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 279 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 338

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 339 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 398

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 399 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439


Score: 70 bits (170), Expect: 1.34409e-10
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct: 26 QDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 85

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 86 LPYLVSNVIELL 97

dbj|BAD72286.1| putative 26S proteasome regulatory particle triple-A ATPase subunit5a [Oryza sativa (japonica cultivar-group)]
(429 aa)

Score: 489 bits (1260), Expect: 5.39612e-137
Length: 339, Idn/Pos/Gap = 257/296/1 (75%/87%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           D+AEED GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD  +L+PGDLVGVNKDSYLI
Sbjct:  92 DEAEED-GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLI 150

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           L+ LP EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  F+++GI+PP
Sbjct: 151 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPP 210

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+KAP
Sbjct: 211 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAP 270

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
            IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD 
Sbjct: 271 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDP 330

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           ALMRSGRLDRKIEFPHP E ARARIL+IHSRKMNV+PDV++EELARSTDDFN A LKAVC
Sbjct: 331 ALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVC 390

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 391 VEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYYA 429


Score: 66 bits (160), Expect: 2.25538e-09
Length: 67, Idn/Pos/Gap = 31/51/0 (46%/76%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          +++   ST+ I + +RL++NE+R L+ E +R   E++S  E++KEN+EKIKLN QLP+LV
Sbjct: 20 DQLASMSTEDIVRASRLLDNEIRVLKDELQRTNLELESFKEKIKENQEKIKLNKQLPYLV 79

Query: 67 AHVVEVL 73
           ++VE+L
Sbjct: 80 GNIVEIL 86

ref|NP_524464.1| CG10370-PA [Drosophila melanogaster]
gb|AAD46823.1| GH12068p [Drosophila melanogaster]
gb|AAF56177.1| CG10370-PA [Drosophila melanogaster]
pir||T44596 26S proteasome regulatory complex chain p50 [imported] - fruit fly (Drosophila melanogaster)
gb|AAF08386.1| 26S proteasome regulatory complex subunit p50 [Drosophila melanogaster]
(428 aa)

Score: 489 bits (1260), Expect: 5.39612e-137
Length: 336, Idn/Pos/Gap = 253/287/0 (75%/85%/0%)

Query: 157 EEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEK 216
           EED+G+    D  ++    V+KTSTRQ  FLP+ GLVD  +L+PGDLVGVNKDSYLILE 
Sbjct:  93 EEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET 152

Query: 217 LPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGV 276
           LP EYDARVKA EVDERPTE ++DIGGLDKQI+E+IEAVVLPMTHK  F+ +GI PPKGV
Sbjct: 153 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGV 212

Query: 277 LMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSII 336
           L+YGPPGTGKTLLARACAAQTK+TFLKLAG  LVQMFIGDGA+LVRDAFALAK+KAP+II
Sbjct: 213 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAII 272

Query: 337 FIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALM 396
           FIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF    D++V+AATNR DILD AL+
Sbjct: 273 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALL 332

Query: 397 RSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEA 456
           RSGRLDRKIEFPHP+E ARARI++IHSRKMNV  DV++EEL+RSTDDFN A  KAVCVEA
Sbjct: 333 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEA 392

Query: 457 GMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           GM ALR     V HEDF+D I  VQAKKK +LNYYA
Sbjct: 393 GMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYYA 428


Score: 72 bits (177), Expect: 2.51233e-11
Length: 72, Idn/Pos/Gap = 34/54/0 (47%/75%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          E  + EE++R STD I  R RL++NE++ ++ E  R+  EIQ+ NE++K+N EKIK+N  
Sbjct: 15 EESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKT 74

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 75 LPYLVSNVIELL 86

gb|EAL27773.1| GA10280-PA [Drosophila pseudoobscura]
(428 aa)

Score: 489 bits (1260), Expect: 6.01436e-137
Length: 336, Idn/Pos/Gap = 253/287/0 (75%/85%/0%)

Query: 157 EEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEK 216
           EED+G+    D  ++    V+KTSTRQ  FLP+ GLVD  +L+PGDLVGVNKDSYLILE 
Sbjct:  93 EEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET 152

Query: 217 LPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGV 276
           LP EYDARVKA EVDERPTE ++DIGGLDKQI+E+IEAVVLPMTHK  F+ +GI PPKGV
Sbjct: 153 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGV 212

Query: 277 LMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSII 336
           L+YGPPGTGKTLLARACAAQTK+TFLKLAG  LVQMFIGDGA+LVRDAFALAK+KAP+II
Sbjct: 213 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAII 272

Query: 337 FIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALM 396
           FIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF    D++V+AATNR DILD AL+
Sbjct: 273 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALL 332

Query: 397 RSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEA 456
           RSGRLDRKIEFPHP+E ARARI++IHSRKMNV  DV++EEL+RSTDDFN A  KAVCVEA
Sbjct: 333 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSTDVNFEELSRSTDDFNGAQCKAVCVEA 392

Query: 457 GMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           GM ALR     V HEDF+D I  VQAKKK +LNYYA
Sbjct: 393 GMIALRRSASSVTHEDFMDAIMEVQAKKKANLNYYA 428


Score: 73 bits (178), Expect: 1.84502e-11
Length: 72, Idn/Pos/Gap = 34/54/0 (47%/75%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          E  + EE++R STD I  R RL++NE++ ++ E  R+  EIQ+ NE++K+N EKIK+N  
Sbjct: 15 EESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVMRITHEIQAQNEKIKDNTEKIKVNKT 74

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 75 LPYLVSNVIELL 86

emb|CAA52445.1| Mg-dependent ATPase 1 [Lycopersicon esculentum]
pir||S56672 probable 26S proteinase chain MA-1 - tomato
sp|P54776|PRS6A_LYCES 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1)
(423 aa)

Score: 489 bits (1259), Expect: 6.81623e-137
Length: 333, Idn/Pos/Gap = 250/290/0 (75%/87%/0%)

Query: 160 EGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPE 219
           +GA  + D+ ++   VV+KTSTRQT+FLP+ GLVD   L+PGDLVGVNKDSYLIL+ LP 
Sbjct:  91 DGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPS 150

Query: 220 EYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMY 279
           EYD+RVKA EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTH+  F+++G++PPKGVL+Y
Sbjct: 151 EYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLY 210

Query: 280 GPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFID 339
           GPPGTGKTL+ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+K+P IIFID
Sbjct: 211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 270

Query: 340 ELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSG 399
           E+DAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  +D ++V+AATNR DILD ALMRSG
Sbjct: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330

Query: 400 RLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMA 459
           RLDRKIEFPHP E ARARIL+IHSRKMNV+PDV++EELARSTDDFN A LKAVCVEAGM 
Sbjct: 331 RLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGML 390

Query: 460 ALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           ALR D   V HEDF +GI  VQAKKK SLNYYA
Sbjct: 391 ALRRDATEVTHEDFNEGIIQVQAKKKASLNYYA 423


Score: 64 bits (156), Expect: 5.98669e-09
Length: 61, Idn/Pos/Gap = 30/47/0 (49%/77%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV 72
          ST+ I + +RL++NE+R ++ E +R   E+ S  E++KEN+EKIKLN QLP+LV ++VE+
Sbjct: 20 STEDIIRASRLLDNEIRIIKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEI 79

Query: 73 L 73
          L
Sbjct: 80 L 80

gb|AAC19196.1| Proteasome regulatory particle, atpase-like protein 5 [Caenorhabditis elegans]
ref|NP_491672.1| proteasome Regulatory Particle, ATPase-like, S6a (48.1 kD) (rpt-5) [Caenorhabditis elegans]
pir||T33155 hypothetical protein F56H1.4 - Caenorhabditis elegans
(430 aa)

Score: 489 bits (1259), Expect: 7.10661e-137
Length: 341, Idn/Pos/Gap = 257/294/1 (75%/86%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           DL+D  E+EGA  + DA Q++   V+KTSTR T FLP+ GLVD  EL+PGDLVGVNKDSY
Sbjct:  91 DLEDNTEEEGANVDLDA-QKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSY 149

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILEKLP EYD+RVKA EVDERPTE ++DIGG DKQI+E+IEAVVLPMTHK  F  +GI 
Sbjct: 150 LILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIH 209

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKT++ARA AAQTK+TFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 210 PPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 269

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           AP+IIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  NDD++V+AATNR D+L
Sbjct: 270 APAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVL 329

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIE PHP+E ARARI++IHSRKMNV+ DV++EELAR TDDFN A  KA
Sbjct: 330 DPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKA 389

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR D   ++HEDF+D I  VQAKKK SLNYYA
Sbjct: 390 VCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430


Score: 68 bits (167), Expect: 3.36534e-10
Length: 73, Idn/Pos/Gap = 34/52/0 (46%/71%/0%)

Query:  1 MERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNA 60
          +E  I EEIL+ ST+ +  R  L++NE+R +R E +R+     +L ER+KEN E+IK+N 
Sbjct: 18 VEDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNK 77

Query: 61 QLPFLVAHVVEVL 73
           LP+LV++VVE+L
Sbjct: 78 TLPYLVSNVVELL 90

sp|Q63569|PRS6A_RAT 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA)
dbj|BAA11939.1| proteasomal ATPase (rat TBP1) [Rattus norvegicus]
(439 aa)

Score: 489 bits (1259), Expect: 8.18963e-137
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 100 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 158

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 159 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 218

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 219 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 278

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 279 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 338

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 339 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 398

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 399 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439


Score: 70 bits (171), Expect: 9.87083e-11
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct: 26 QDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 85

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 86 LPYLVSNVIELL 97

gb|AAH62019.1| Proteasome (prosome, macropain) 26S subunit, ATPase 3 [Rattus norvegicus]
gb|AAH05783.1| Proteasome (prosome, macropain) 26S subunit, ATPase 3 [Mus musculus]
(442 aa)

Score: 489 bits (1258), Expect: 1.02589e-136
Length: 341, Idn/Pos/Gap = 256/291/1 (75%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 103 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 161

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 162 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 221

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 222 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 281

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 282 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 341

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 342 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 401

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 402 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442


Score: 70 bits (171), Expect: 9.95354e-11
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct:  29 QDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT  88

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct:  89 LPYLVSNVIELL 100

gb|AAA36666.1| tat binding protein-1 (tbp-1)
(404 aa)

Score: 488 bits (1257), Expect: 1.20213e-136
Length: 341, Idn/Pos/Gap = 255/290/1 (74%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  65 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 123

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 124 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 183

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 184 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 243

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 244 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 303

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 304 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 363

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM AL      + HED+++GI  VQAKKK +L YYA
Sbjct: 364 VCVEAGMIALARGATELTHEDYMEGILEVQAKKKANLQYYA 404


Score: 61 bits (147), Expect: 6.50952e-08
Length: 61, Idn/Pos/Gap = 27/48/0 (44%/78%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV 72
          ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP+LV++V+E+
Sbjct:  2 STEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEL 61

Query: 73 L 73
          L
Sbjct: 62 L 62

ref|NP_113783.1| proteasome (prosome, macropain) 26S subunit, ATPase 3 [Rattus norvegicus]
gb|AAB70882.1| spermatogenic cell/sperm-associated Tat-binding protein homolog Sata [Rattus norvegicus]
(442 aa)

Score: 488 bits (1257), Expect: 1.45645e-136
Length: 341, Idn/Pos/Gap = 255/291/1 (74%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 103 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 161

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 162 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 221

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 222 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 281

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQ+DGF  N  V+V+AATNR DIL
Sbjct: 282 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQMDGFQPNTQVKVIAATNRVDIL 341

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 342 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 401

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 402 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442


Score: 70 bits (171), Expect: 1.23649e-10
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct:  29 QDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNNT  88

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct:  89 LPYLVSNVIELL 100

gb|AAH46948.1| MGC53343 protein [Xenopus laevis]
(423 aa)

Score: 487 bits (1254), Expect: 2.63375e-136
Length: 341, Idn/Pos/Gap = 254/290/1 (74%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  84 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 142

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 143 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 202

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAF+LAK+K
Sbjct: 203 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEK 262

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF     V+V+AATNR DIL
Sbjct: 263 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDIL 322

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 323 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 382

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 383 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 423


Score: 67 bits (164), Expect: 6.67065e-10
Length: 70, Idn/Pos/Gap = 30/55/0 (42%/78%/0%)

Query:  4 GIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLP 63
          G+ E++L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP
Sbjct: 12 GLGEDVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLP 71

Query: 64 FLVAHVVEVL 73
          +LV++V+E+L
Sbjct: 72 YLVSNVIELL 81

gb|EAL37876.1| 26S protease subunit regulatory subunit 6a [Cryptosporidium hominis]
(425 aa)

Score: 487 bits (1254), Expect: 2.98489e-136
Length: 342, Idn/Pos/Gap = 248/295/1 (72%/86%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D  D +E+EG   E D ++    +V+KTS+RQTVFLP+ GLV  +EL+PGDLVGVNKDSY
Sbjct:  84 DFSDEQENEGEGMEFDGDKNDKCMVIKTSSRQTVFLPVIGLVPENELKPGDLVGVNKDSY 143

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LIL+KLP EYD+RVKA EVDERP E+++DIGGLDKQI+E++EA+VLPMTHK  FE++GIK
Sbjct: 144 LILDKLPPEYDSRVKAMEVDERPMEEYSDIGGLDKQIQELVEAIVLPMTHKERFEKIGIK 203

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA++VRDAF +A++K
Sbjct: 204 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKMVRDAFEIAREK 263

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIG KRFDS+ SGDRE QRTMLELLNQLDGF  +D V+V+AATNRPD L
Sbjct: 264 APSIIFIDELDAIGMKRFDSEHSGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRPDTL 323

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVH-PDVSYEELARSTDDFNAAMLK 450
           D AL+RSGRLDRK+E PHP+E AR+RIL+IHSRKMNV   DV+++EL+RSTDDFN A LK
Sbjct: 324 DPALLRSGRLDRKVELPHPNEEARSRILQIHSRKMNVDLNDVNFQELSRSTDDFNGAQLK 383

Query: 451 AVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           AVCVEAGM ALR    ++ HED+++GIAAV AKKK  L+Y++
Sbjct: 384 AVCVEAGMTALRRGATILCHEDYVEGIAAVLAKKKSPLSYFS 425


Score: 63 bits (154), Expect: 1.16702e-08
Length: 67, Idn/Pos/Gap = 30/45/0 (44%/67%/0%)

Query:  7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV 66
          E +   S   +  R RL++ E+R ++ E  RL+ E+  +NER++ N EKIKLN QLP+LV
Sbjct: 17 ESVKTLSVSELQSRIRLLDGEIRLMKSESNRLKHELNQMNERIRSNTEKIKLNKQLPYLV 76

Query: 67 AHVVEVL 73
          A++VE L
Sbjct: 77 ANIVESL 83

emb|CAE67391.1| Hypothetical protein CBG12876 [Caenorhabditis briggsae]
(430 aa)

Score: 487 bits (1253), Expect: 3.67722e-136
Length: 341, Idn/Pos/Gap = 256/294/1 (75%/86%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           DL+D  E+EGA  + DA Q++   V+KTSTR T FLP+ GLVD  EL+PGDLVGVNKDSY
Sbjct:  91 DLEDNLEEEGANVDLDA-QKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSY 149

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILEKLP EYD+RVKA EVDERPTE ++DIGG DKQI+E+IEAVVLPMTHK  F  +GI 
Sbjct: 150 LILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIH 209

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKT++ARA AAQTK+TFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 210 PPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 269

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           AP+IIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  ND+++V+AATNR D+L
Sbjct: 270 APAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDEIKVIAATNRIDVL 329

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIE PHP+E ARARI++IHSRKMNV+ DV++EELAR TDDFN A  KA
Sbjct: 330 DPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKA 389

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR D   ++HEDF+D I  VQAKKK SLNYYA
Sbjct: 390 VCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430


Score: 66 bits (161), Expect: 1.51107e-09
Length: 73, Idn/Pos/Gap = 32/52/0 (43%/71%/0%)

Query:  1 MERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNA 60
          ++  + E+ILR ST+ +  R  L++NE+R +R E +R+     +L ER+KEN E+IK+N 
Sbjct: 18 VDEALDEDILRMSTEDLKSRIHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNK 77

Query: 61 QLPFLVAHVVEVL 73
           LP+LV++VVE+L
Sbjct: 78 TLPYLVSNVVELL 90

gb|AAH71390.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Danio rerio]
ref|NP_001002064.1| proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Danio rerio]
(404 aa)

Score: 485 bits (1249), Expect: 1.11549e-135
Length: 341, Idn/Pos/Gap = 254/290/1 (74%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  65 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 123

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 124 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 183

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 184 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 243

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 244 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDIL 303

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV  DV++EELAR TDDFN A  KA
Sbjct: 304 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCLDVNFEELARCTDDFNGAQCKA 363

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 364 VCVEAGMIALRRGATELNHEDYMEGILEVQAKKKANLQYYA 404


Score: 61 bits (148), Expect: 5.06804e-08
Length: 61, Idn/Pos/Gap = 27/48/0 (44%/78%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV 72
          ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP+LV++V+E+
Sbjct:  2 STEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIEL 61

Query: 73 L 73
          L
Sbjct: 62 L 62

emb|CAA71486.1| TBP10 protein [Xenopus laevis]
sp|O42586|PR6A2_XENLA 26S protease regulatory subunit 6A (TAT-binding protein 10) (TBP-10)
(404 aa)

Score: 484 bits (1247), Expect: 1.90273e-135
Length: 341, Idn/Pos/Gap = 252/289/1 (73%/84%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  65 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 123

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 124 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 183

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAF+LAK+K
Sbjct: 184 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEK 243

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIG KRFDS+++GDRE QRTMLELLNQLDGF     V+V+AATNR DIL
Sbjct: 244 APSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDIL 303

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 304 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 363

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAG+ ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 364 VCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404


Score: 61 bits (147), Expect: 6.95887e-08
Length: 61, Idn/Pos/Gap = 27/48/0 (44%/78%/0%)

Query: 13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV 72
          ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP+LV++V+E+
Sbjct:  2 STEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIEL 61

Query: 73 L 73
          L
Sbjct: 62 L 62

ref|NP_032974.1| proteasome (prosome, macropain) 26S subunit, ATPase 3 [Mus musculus]
dbj|BAB16347.1| proteasomal ATPase [Mus musculus]
sp|O88685|PRS6A_MOUSE 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1)
dbj|BAA32559.1| Tat binding protein-1 [Mus musculus]
(442 aa)

Score: 484 bits (1245), Expect: 3.27277e-135
Length: 341, Idn/Pos/Gap = 255/290/1 (74%/85%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 103 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 161

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP +YD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 162 LILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 221

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 222 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 281

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 282 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 341

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 342 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKA 401

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED ++GI  VQAKKK +L YYA
Sbjct: 402 VCVEAGMIALRRGATELTHEDHMEGILEVQAKKKANLQYYA 442


Score: 70 bits (171), Expect: 1.18597e-10
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct:  29 QDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT  88

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct:  89 LPYLVSNVIELL 100

gb|EAA17669.1| 26s protease regulatory subunit 6a (tat-binding protein homolog 1) (tbp-1). [baker's yeast [Plasmodium yoelii yoelii]
(450 aa)

Score: 484 bits (1245), Expect: 3.61742e-135
Length: 332, Idn/Pos/Gap = 244/289/0 (73%/87%/0%)

Query: 160 EGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPE 219
           E   ++ D  ++   +V+KTSTRQT+FLP+PGL++ SEL+PGDLVGVNKDSYLI++KLP 
Sbjct: 118 EEGFRDIDDEKKGKCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSYLIIDKLPP 177

Query: 220 EYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMY 279
           EYD RVKA EV E+PTED++DIGGLDKQIE+++EA+VLPM HK  FE++GIKPPKGVLM+
Sbjct: 178 EYDNRVKAMEVIEKPTEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMH 237

Query: 280 GPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFID 339
           GPPGTGKTLLARACA+QT ATFLKLAG  LVQMFIGDGA++VRDAF LAK+KAP+IIFID
Sbjct: 238 GPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFID 297

Query: 340 ELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSG 399
           ELDAIGTKRFDS+ SGDRE QRTMLELLNQLDGF  ++ V+V+AATNRPD LD AL+RSG
Sbjct: 298 ELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDETVKVIAATNRPDTLDPALLRSG 357

Query: 400 RLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMA 459
           RLDRKIE PHP+E +RARIL+IHSRKMNVH DV++EELARSTDDFN A LKAVCVEAGM 
Sbjct: 358 RLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMI 417

Query: 460 ALRADRKVVIHEDFIDGIAAVQAKKKMSLNYY 491
           ALR     + HEDFI+GI +V +KKK +LNY+
Sbjct: 418 ALRRGATEIDHEDFIEGITSVLSKKKSTLNYF 449

gb|AAB24840.1| Tat binding protein 1, TBP-1=transcriptional activator [human, Peptide, 439 aa]
(439 aa)

Score: 483 bits (1242), Expect: 6.5415e-135
Length: 341, Idn/Pos/Gap = 254/289/1 (74%/84%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 100 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 158

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 159 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 218

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 219 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 278

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 279 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 338

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDD N A  KA
Sbjct: 339 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDPNGAQCKA 398

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM AL      + HED+++GI  VQAKKK +L YYA
Sbjct: 399 VCVEAGMIALARGATELTHEDYMEGILEVQAKKKANLQYYA 439


Score: 70 bits (170), Expect: 1.33292e-10
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct: 26 QDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 85

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 86 LPYLVSNVIELL 97

gb|AAV31415.1| putative 26S protease regulatory subunit 6A [Toxoptera citricida]
(431 aa)

Score: 482 bits (1241), Expect: 8.76002e-135
Length: 341, Idn/Pos/Gap = 253/288/2 (74%/84%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D  D EED GA  + D+ +     V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  93 DPQDTEED-GAVVDLDSQRTGKCAVIKTSTRQTYFLPVIGLVDPEQLKPGDLVGVNKDSY 151

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           L+LE LP EYDARVKA EVDERPTE + DIGGLDKQI+E+IEAVVLPMTHK  F  +GI+
Sbjct: 152 LVLETLPAEYDARVKAMEVDERPTEQYVDIGGLDKQIQELIEAVVLPMTHKEKFLNLGIQ 211

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVL+YGPPGTGKTLLARACAAQTK+TFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 212 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 271

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           AP++IFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF    D++V+AATNR DIL
Sbjct: 272 APAVIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDIL 331

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFPHP++ ARARI++IHSRKMN   DV++EEL+RSTDDFN A  KA
Sbjct: 332 DPALLRSGRLDRKIEFPHPNQEARARIMQIHSRKMNKF-DVNFEELSRSTDDFNGAQCKA 390

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     V HEDF+D I  VQAKKK +LNYYA
Sbjct: 391 VCVEAGMIALRRGASTVTHEDFMDAIMXVQAKKKSNLNYYA 431


Score: 60 bits (146), Expect: 9.31893e-08
Length: 69, Idn/Pos/Gap = 28/50/0 (40%/72%/0%)

Query:  5 IPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPF 64
          + +EIL  S + I  R RL++N+++ ++ +  R+  E+QS  +++KEN EKIK+N  LP+
Sbjct: 22 VEDEILLMSNEEIISRTRLLDNDIKVMKSDVMRISHELQSQADKIKENTEKIKVNKTLPY 81

Query: 65 LVAHVVEVL 73
          LV++V+E+L
Sbjct: 82 LVSNVIELL 90

gb|AAD24194.1| Tat-binding protein-1 [Drosophila melanogaster]
(431 aa)

Score: 480 bits (1235), Expect: 4.76546e-134
Length: 336, Idn/Pos/Gap = 249/284/1 (74%/84%/0%)

Query: 157 EEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEK 216
           EED+G+    D  ++    V+KTSTRQ  FLP+ GLVD  +L+PGDL GVNKD YLILE 
Sbjct:  97 EEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLAGVNKDFYLILET 156

Query: 217 LPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGV 276
           LP EYDARVKA EVDERPTE F+DIGGLDKQI+E+IEAVVLPMTHK  F+ +GI PPKGV
Sbjct: 157 LPAEYDARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGV 216

Query: 277 LMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSII 336
           ++YGPPGTGKTLLARACAAQTK+TFLKLAG  LVQMFIGDGA+LVRDAFALAK+KAP+II
Sbjct: 217 ILYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAII 276

Query: 337 FIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALM 396
           FIDELDAIGTKRFDS+++GDRE QRTMLELLNQL+GF    D++V+AATNR DIL  AL+
Sbjct: 277 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDIL-PALL 335

Query: 397 RSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEA 456
           RSGRLDRKIEFPHP+E ARARI++IHSRKMNV  DV++EEL+RSTDDFN A  KAVCVEA
Sbjct: 336 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEA 395

Query: 457 GMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           GM ALR     V HEDF+D I  VQAKKK +LNYYA
Sbjct: 396 GMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYYA 431


Score: 71 bits (174), Expect: 5.69106e-11
Length: 72, Idn/Pos/Gap = 33/54/0 (45%/75%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          E  + E+++R STD I  R RL++NE++ ++ E  R+  EIQ+ NE++K+N EKIK+N  
Sbjct: 19 EESLGEKVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKT 78

Query: 62 LPFLVAHVVEVL 73
          LP+LV++V+E+L
Sbjct: 79 LPYLVSNVIELL 90

emb|CAG11004.1| unnamed protein product [Tetraodon nigroviridis]
(440 aa)

Score: 473 bits (1217), Expect: 5.87419e-132
Length: 354, Idn/Pos/Gap = 251/285/14 (70%/80%/3%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  88 DPNDQEED-GANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 146

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 147 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 206

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 207 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 266

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRP--- 388
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V          
Sbjct: 267 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVKMLPQNTNTL 326

Query: 389 ----------DILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELA 438
                     DILD AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELA
Sbjct: 327 FLYHVNLRGVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELA 386

Query: 439 RSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           R TDDFN A  KAVCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 387 RCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKANLQYYA 440


Score: 72 bits (177), Expect: 2.36979e-11
Length: 73, Idn/Pos/Gap = 33/57/0 (45%/78%/0%)

Query:  1 MERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNA 60
          +E GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N 
Sbjct: 13 VEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNK 72

Query: 61 QLPFLVAHVVEVL 73
           LP+LV++V+E+L
Sbjct: 73 TLPYLVSNVIELL 85

gb|EAL65256.1| hypothetical protein DDB0186002 [Dictyostelium discoideum]
(421 aa)

Score: 471 bits (1211), Expect: 3.19557e-131
Length: 323, Idn/Pos/Gap = 240/279/0 (74%/86%/0%)

Query: 170 QQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFE 229
           Q S  VVVK STRQT+FL  PG+VDV +LRPGDLVG+NKDSY+IL+ LP EYD+RVKA E
Sbjct:  99 QPSKCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAME 158

Query: 230 VDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLL 289
           +DE+PTE+++DIGGLDKQI+E++EAVVLPMTHK  FE +GIKPPKGVLMYGPPGTGKTLL
Sbjct: 159 IDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLL 218

Query: 290 ARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRF 349
           ARACAAQT +T+LKLAG  LVQMFIGDGA+LVRDAFALAK+K P+IIFIDELDAIGTKRF
Sbjct: 219 ARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRF 278

Query: 350 DSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH 409
           DS+ SGDRE QRTMLELLNQLDGF  + +++V+AATNR DILD AL+RSGRLDRKIEFP 
Sbjct: 279 DSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPL 338

Query: 410 PDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVI 469
           P+E ARA IL+IHSRKMNV  DV+++ELARS++DFN A LKAVCVEAGM ALR     +I
Sbjct: 339 PNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELI 398

Query: 470 HEDFIDGIAAVQAKKKMSLNYYA 492
           H DF++G   V AKKK +L YYA
Sbjct: 399 HNDFVEGCVEVMAKKKKTLEYYA 421


Score: 65 bits (157), Expect: 5.28241e-09
Length: 72, Idn/Pos/Gap = 31/51/0 (43%/70%/0%)

Query:  2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ 61
          E  IP+EI + + D + ++A+L+ENE + LR E      E+ S+ +R+KEN +K+++N Q
Sbjct: 19 EAVIPDEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQ 78

Query: 62 LPFLVAHVVEVL 73
          LP LVA+VVE++
Sbjct: 79 LPHLVANVVEII 90

gb|EAA05708.1| ENSANGP00000019796 [Anopheles gambiae str. PEST]
ref|XP_309949.1| ENSANGP00000019796 [Anopheles gambiae str. PEST]
(431 aa)

Score: 466 bits (1198), Expect: 8.77273e-130
Length: 342, Idn/Pos/Gap = 240/286/0 (70%/83%/0%)

Query: 151 DDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDS 210
           D L++ +E E A    D+ ++  + ++KTSTRQT FLP+ GLV+   LRPGDLVG+NKD+
Sbjct:  90 DPLEEEKEQEDAMLLQDSQRKCKSAIIKTSTRQTFFLPMIGLVEPEALRPGDLVGLNKDA 149

Query: 211 YLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGI 270
           YLI++KLP E D RVKA EV ERPTE + DIGGLD QI E++EA+VLP+THK  FER+GI
Sbjct: 150 YLIMDKLPPELDPRVKAMEVIERPTEQYIDIGGLDTQIAELMEAIVLPLTHKAKFERIGI 209

Query: 271 KPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKK 330
           +PPKGVLMYGPPGTGKTLLARACAAQTKATF+KLAG  LVQMFIGDGA+LVRDAFALA++
Sbjct: 210 QPPKGVLMYGPPGTGKTLLARACAAQTKATFIKLAGPQLVQMFIGDGAKLVRDAFALARE 269

Query: 331 KAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDI 390
           KAP+I+FIDELDAIGTKRFDS ++GDRE QRTMLELLNQLDGF  + DV+V+ ATNR DI
Sbjct: 270 KAPTILFIDELDAIGTKRFDSTKAGDREVQRTMLELLNQLDGFSSSADVKVIGATNRVDI 329

Query: 391 LDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLK 450
           LD A++RSGRLDRKIEFPHP++ ARARI++IHSR+MNV  +V+YEELARSTD FN A  K
Sbjct: 330 LDPAMLRSGRLDRKIEFPHPNDVARARIMQIHSRRMNVSGEVNYEELARSTDGFNGAQCK 389

Query: 451 AVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           AVCVEAGM ALR     V HEDF++ I  VQAKKK +LNY+A
Sbjct: 390 AVCVEAGMIALRRSAVEVAHEDFMEAILEVQAKKKAALNYFA 431


Score: 45 bits (106), Expect: 0.003575
Length: 73, Idn/Pos/Gap = 26/44/0 (35%/60%/0%)

Query:  1 MERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNA 60
          +E+ + E  L  ST+ + +R   + NE++ L+        ++++L  +VK N E IKL  
Sbjct: 15 IEKAVEETFLGWSTEELIRRTNGLNNEIKALKDLLVSPVLDLKTLTGKVKANAEHIKLQK 74

Query: 61 QLPFLVAHVVEVL 73
          +LP+LVA V+EVL
Sbjct: 75 RLPYLVATVMEVL 87

ref|XP_508413.1| PREDICTED: similar to PSMC3 protein [Pan troglodytes]
(954 aa)

Score: 463 bits (1192), Expect: 4.6934e-129
Length: 341, Idn/Pos/Gap = 239/271/22 (70%/79%/6%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 636 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 694

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA E+                     +EA+VLPM HK  FE +GI+
Sbjct: 695 LILETLPTEYDSRVKAMEL---------------------VEAIVLPMNHKEKFENLGIQ 733

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 734 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 793

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 794 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 853

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 854 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 913

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR     + HED+++GI  VQAKKK +L YYA
Sbjct: 914 VCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 954


Score: 73 bits (178), Expect: 1.58773e-11
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct: 562 QDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 621

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct: 622 LPYLVSNVIELL 633

gb|EAA78760.1| conserved hypothetical protein [Gibberella zeae PH-1]
ref|XP_391773.1| conserved hypothetical protein [Gibberella zeae PH-1]
(459 aa)

Score: 458 bits (1178), Expect: 1.90715e-127
Length: 343, Idn/Pos/Gap = 241/286/2 (70%/83%/0%)

Query: 152 DLDDAEE--DEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           DLD   E  +EGA  + DA +   + V+KTSTRQT+FLP+ GLVD   L+PGDL+GVNKD
Sbjct: 117 DLDPTAESSEEGANIDLDATRVGKSAVIKTSTRQTIFLPLIGLVDADTLKPGDLIGVNKD 176

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           SYLIL+ LP EYD+RVKA EVDE+PTE + D+GGLDKQIEE++EA+V PM     F+++G
Sbjct: 177 SYLILDTLPAEYDSRVKAMEVDEKPTEQYTDVGGLDKQIEELVEAIVWPMKEAERFKKIG 236

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
           IK PKG LMYGPPGTGKTLLARACAAQT ATFLKLAG  LVQMFIGDGA+LVRD FALAK
Sbjct: 237 IKAPKGALMYGPPGTGKTLLARACAAQTDATFLKLAGPQLVQMFIGDGAKLVRDCFALAK 296

Query: 330 KKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
           +KAP+IIFIDELDA+GTKRFDS++SGDRE QRTMLELLNQLDGF  +D ++VLAATNR D
Sbjct: 297 EKAPAIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVD 356

Query: 390 ILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAML 449
           +LD AL+RSGRLDRKIEFP P+E ARA+IL+IHSRKM V P V++ ELARSTD+F  AML
Sbjct: 357 VLDPALLRSGRLDRKIEFPLPNEEARAQILKIHSRKMRVDPGVNWGELARSTDEFGGAML 416

Query: 450 KAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           KAVCVEAGM ALR+ +  + HE ++D IA VQAKKK ++N+YA
Sbjct: 417 KAVCVEAGMIALRSGKNKIGHEHYVDAIAEVQAKKKDTVNFYA 459


Score: 54 bits (129), Expect: 8.29634e-06
Length: 61, Idn/Pos/Gap = 29/41/0 (47%/67%/0%)

Query:  13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV  72
           ST  I  R RL+EN+ R ++ E  RL  E  ++ E++KEN +KI  N QLP+LV +VVE+
Sbjct:  56 STQDIQTRKRLLENDSRIMKSELSRLSHEKAAMGEKIKENLDKIANNRQLPYLVGNVVEL 115

Query:  73 L  73
           L
Sbjct: 116 L 116

dbj|BAC38743.1| unnamed protein product [Mus musculus]
(451 aa)

Score: 457 bits (1176), Expect: 3.5068e-127
Length: 305, Idn/Pos/Gap = 236/266/1 (77%/87%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 103 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 161

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 162 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 221

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 222 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 281

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 282 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDIL 341

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KA
Sbjct: 342 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKA 401

Query: 452 VCVEA 456
           VCVEA
Sbjct: 402 VCVEA 406


Score: 71 bits (173), Expect: 6.83775e-11
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct:  29 QDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT  88

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct:  89 LPYLVSNVIELL 100

emb|CAG80793.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_502605.1| hypothetical protein [Yarrowia lipolytica]
(413 aa)

Score: 452 bits (1163), Expect: 1.0641e-125
Length: 341, Idn/Pos/Gap = 235/283/0 (68%/82%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D++    +EGA  + +A++   + V+KTSTRQTVFLP+ GLVD   L+PGDL+GVNKDS+
Sbjct:  73 DMEGEVAEEGANVDVEASRVGKSAVIKTSTRQTVFLPLVGLVDPETLKPGDLIGVNKDSF 132

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LIL+ LP EYD+RVKA EVDE+P E +ADIGGLDKQ+EE++EAVVLP+     F+++GIK
Sbjct: 133 LILDTLPAEYDSRVKAMEVDEKPKETYADIGGLDKQVEELVEAVVLPLKQAEKFKQLGIK 192

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKG LMYGPPGTGKTLLARACAAQ+ ATFLKLA   LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 193 PPKGALMYGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEK 252

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           AP+IIFIDELDAIGTKRFDSD+SGDRE QRTMLELLNQLDGF  +D V+VLAATNR D+L
Sbjct: 253 APTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDVL 312

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P E+ARA IL+IHSRKM     +++ ELARSTD+FN A LKA
Sbjct: 313 DPALLRSGRLDRKIEFPLPSESARADILQIHSRKMTCDDSINWMELARSTDEFNGAQLKA 372

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           V VEAGM ALR+ +  + HEDF++ I  VQA+K  S+++YA
Sbjct: 373 VTVEAGMIALRSGKNKITHEDFVEAITEVQARKSKSVSFYA 413


Score: 58 bits (139), Expect: 5.60337e-07
Length: 66, Idn/Pos/Gap = 29/46/0 (43%/69%/0%)

Query:  8 EILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVA 67
          +I   ST  I  R RL+ENE++ ++ E +RL  E  ++NE++K+N +KI+ N  LP+LV 
Sbjct:  7 DIASNSTQDILNRKRLLENEIKIMKSEFQRLSHERNTMNEKIKDNADKIENNKVLPYLVG 66

Query: 68 HVVEVL 73
          +VVE+L
Sbjct: 67 NVVELL 72

emb|CAB16387.1| SPAC3A11.12c [Schizosaccharomyces pombe]
dbj|BAA88693.1| regulatory subunit of 26S proteasome [Schizosaccharomyces pombe]
sp|O14126|PRS6A_SCHPO 26S protease regulatory subunit 6A
pir||T11634 26S proteasome regulatory particle chain RPT5 - fission yeast (Schizosaccharomyces pombe)
(438 aa)

Score: 452 bits (1162), Expect: 1.56196e-125
Length: 339, Idn/Pos/Gap = 231/279/0 (68%/82%/0%)

Query: 154 DDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLI 213
           D+ +  E A Q S+A +   + V+KTSTRQT+FLP+ GLV+  EL PGDL+GVNKDSYLI
Sbjct: 100 DEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLI 159

Query: 214 LEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPP 273
           ++KLP EYD+RVKA EVDE+PTE ++DIGGL KQIEE+ EA+VLPM     F ++G+KPP
Sbjct: 160 IDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPP 219

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KG LM+GPPGTGKTLLARACAAQ+ ATFLKLA   LVQMFIGDGA+LVRDAFALAK+K+P
Sbjct: 220 KGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSP 279

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
           +IIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  +D V+V+AATNR D LD 
Sbjct: 280 AIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDP 339

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           AL+RSGRLDRK+EFP P+E AR  ILRIHSRKM +  D+++EELARSTD++N AMLK+VC
Sbjct: 340 ALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVC 399

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VEAGM ALR     + HE F+DGI  VQ +K  +L Y+A
Sbjct: 400 VEAGMIALRQGDTKINHEHFMDGILEVQMRKSKTLQYFA 438


Score: 63 bits (153), Expect: 1.31162e-08
Length: 70, Idn/Pos/Gap = 31/48/0 (44%/68%/0%)

Query:  4 GIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLP 63
          GI +EIL    D +  R RL+EN+++ ++ E +RL  E  ++ E++KEN+EKI  N  LP
Sbjct: 26 GIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLP 85

Query: 64 FLVAHVVEVL 73
          +LV +VVE+L
Sbjct: 86 YLVGNVVEIL 95

gb|EAK96478.1| likely 26S proteasome regulatory particle ATPase Rpt5p [Candida albicans SC5314]
gb|EAK96407.1| likely 26S proteasome regulatory particle ATPase Rpt5p [Candida albicans SC5314]
(454 aa)

Score: 451 bits (1159), Expect: 2.70913e-125
Length: 342, Idn/Pos/Gap = 237/283/1 (69%/82%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D D    ++GA  + DA +   + V+KTSTRQT+FLP+ GLVD S+L+P DL+GVNKDSY
Sbjct: 113 DADKEASEQGANIDIDAARAGKSAVIKTSTRQTIFLPMIGLVDPSKLKPNDLIGVNKDSY 172

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           L+L+ LP EYD+RVKA EVDE+PTED++DIGGLDKQIEE+IEAVVLPM     F+ +GIK
Sbjct: 173 LVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIK 232

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKG LMYGPPGTGKTLLARACAAQ+ ATFLKLA   LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 233 PPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEK 292

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           AP+IIFIDELDAIGTKRFDSD+SGDRE QRTMLELLNQLDGF  +D V+VLAATNR D L
Sbjct: 293 APTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTL 352

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNV-HPDVSYEELARSTDDFNAAMLK 450
           D AL+RSGRLDRKIEFP P E AR  +L+IH+RK++  +  V++ ELARSTD+FN A LK
Sbjct: 353 DPALLRSGRLDRKIEFPLPSEEARESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQLK 412

Query: 451 AVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           AV VEAGM ALR  + ++ HEDF++ I+ VQA+K  S+N+YA
Sbjct: 413 AVTVEAGMIALRNGKSIIKHEDFVEAISEVQARKSKSVNFYA 454


Score: 65 bits (159), Expect: 2.70982e-09
Length: 80, Idn/Pos/Gap = 36/52/0 (45%/65%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           E  I +EIL  ST  I  R +L++N+++ +R E +RL  E   + ER+K+N+EKI  N Q
Sbjct:  39 ENVIDQEILNSSTSDIINRTKLLDNDIKVMRSESQRLNHEKTVMLERIKDNQEKINNNKQ  98

Query:  62 LPFLVAHVVEVLTPAALKRA  81
           LP+LV +VVE+L   A K A
Sbjct:  99 LPYLVGNVVELLNLDADKEA 118

emb|CAF06032.1| probable 26S proteasome regulatory particle chain RPT5 [Neurospora crassa]
ref|XP_323767.1| hypothetical protein [Neurospora crassa]
gb|EAA28255.1| hypothetical protein [Neurospora crassa]
(462 aa)

Score: 451 bits (1159), Expect: 3.39366e-125
Length: 345, Idn/Pos/Gap = 239/287/4 (69%/83%/1%)

Query: 152 DLDDAEE--DEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           DLD   E  +EGA  + DA +   + V+KTSTRQT+FLP+ GLVD  +L+PGDL+GVNKD
Sbjct: 118 DLDPTAESSEEGANIDLDATRVGKSAVIKTSTRQTIFLPLIGLVDPEKLKPGDLIGVNKD 177

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           SYLIL+ LP EYD+RVKA EVDE+P E + D+GGLDKQI+E++EA+V PM     F+++G
Sbjct: 178 SYLILDTLPAEYDSRVKAMEVDEKPQEKYTDVGGLDKQIDELVEAIVWPMKEAERFKKIG 237

Query: 270 IKPPKGV--LMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFAL 327
           IK PKG+  LMYGPPGTGKTLLARACAAQT ATFLKLAG  LVQMFIGDGA+LVRD FAL
Sbjct: 238 IKAPKGIGALMYGPPGTGKTLLARACAAQTDATFLKLAGPQLVQMFIGDGAKLVRDCFAL 297

Query: 328 AKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNR 387
           AK+KAPSIIFIDELDA+GTKRFDS++SGDRE QRTMLELLNQLDGF  +D ++VLAATNR
Sbjct: 298 AKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNR 357

Query: 388 PDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAA 447
            D+LD AL+RSGRLDRKIEFP P+E ARA+IL+IHSRKM V+P V++ ELARSTD+F  A
Sbjct: 358 IDVLDPALLRSGRLDRKIEFPLPNEEARAQILKIHSRKMKVNPGVNWGELARSTDEFGGA 417

Query: 448 MLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           MLKAVCVEAGM ALR  +  + HE ++D I+ VQAKKK ++N+YA
Sbjct: 418 MLKAVCVEAGMIALRMGKNQIGHEHYVDAISEVQAKKKETVNFYA 462


Score: 63 bits (153), Expect: 1.34487e-08
Length: 69, Idn/Pos/Gap = 33/49/0 (47%/71%/0%)

Query:   5 IPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPF  64
           + EEIL  ST+ I  R RL+EN+ R ++ E +RL  E  ++ +++KEN+EKI  N QLP+
Sbjct:  49 LDEEILSLSTEDILMRKRLLENDARIMKSEYQRLSHERATMKDKIKENQEKIANNRQLPY 108

Query:  65 LVAHVVEVL  73
           LV +VVE+L
Sbjct: 109 LVGNVVELL 117

gb|EAL17448.1| hypothetical protein CNBM1410 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW46819.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_568336.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
(464 aa)

Score: 450 bits (1158), Expect: 4.50684e-125
Length: 338, Idn/Pos/Gap = 236/277/1 (69%/81%/0%)

Query: 155 DAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLIL 214
           D+EE EGA       ++S   V+KTSTRQTVFLPI GLV  ++L PGDL+GVNKDSYL+L
Sbjct: 128 DSEEQEGATHNEQNAKKSKCAVIKTSTRQTVFLPIIGLVPHNQLAPGDLIGVNKDSYLVL 187

Query: 215 EKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPK 274
           +KLP+EYDARVKA EVDERPTE + DIGGLDKQIEE++EA+VLPM     F+ +GI PPK
Sbjct: 188 DKLPDEYDARVKAMEVDERPTETYTDIGGLDKQIEELVEAIVLPMQQADKFKTLGITPPK 247

Query: 275 GVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPS 334
           G LMYGPPGTGKTLLARACAAQT A +LKLAG +LVQM++GDGA+LVRDAF LAK+KAP+
Sbjct: 248 GCLMYGPPGTGKTLLARACAAQTNACYLKLAGPALVQMYLGDGAKLVRDAFELAKQKAPA 307

Query: 335 IIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAA 394
           IIFIDELDAIGTKRFDSD+SGDRE QRTMLELLNQLDGF  +  ++V+AATNR DILD A
Sbjct: 308 IIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFSSDSRIKVIAATNRIDILDPA 367

Query: 395 LMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCV 454
           L+RSGRLDRKIEFP P+E+AR  IL+IHSRK+N H  V++EELARST+D N A LKAVCV
Sbjct: 368 LLRSGRLDRKIEFPLPNESAREHILQIHSRKLN-HHGVNFEELARSTEDMNGAQLKAVCV 426

Query: 455 EAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           EAGM ALR +   + HE F  GI  VQA+K    +Y+A
Sbjct: 427 EAGMLALRQNATQLTHEHFHGGILEVQARKAKEHHYFA 464


Score: 57 bits (138), Expect: 7.63e-07
Length: 69, Idn/Pos/Gap = 26/45/0 (37%/65%/0%)

Query:   5 IPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPF  64
           +PE +++     I  + R+I+NE++ +R+E  RL  E + + E++ +N  KIK N  LP+
Sbjct:  57 VPEHVVKSDAQEIKMQTRMIDNEIKMMRQENLRLSHEREQMVEKIADNTTKIKQNKVLPY 116

Query:  65 LVAHVVEVL  73
           LV+ VVE+L
Sbjct: 117 LVSKVVEIL 125

emb|CAG90590.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_462104.1| unnamed protein product [Debaryomyces hansenii]
(427 aa)

Score: 449 bits (1156), Expect: 5.98517e-125
Length: 335, Idn/Pos/Gap = 236/279/1 (70%/83%/0%)

Query: 159 DEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLP 218
           ++GA  + DA +   + V+KTSTRQT+FLP+ GLVD + L+P DL+GVNKDSYLIL+ LP
Sbjct:  93 EQGANVDLDATRSGKSAVIKTSTRQTIFLPLIGLVDPANLKPNDLIGVNKDSYLILDTLP 152

Query: 219 EEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLM 278
            EYD+RVKA EVDE+PTED++DIGGLDKQIEE+IEAVVLPM     F+ +GIKPPKG LM
Sbjct: 153 SEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALM 212

Query: 279 YGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFI 338
           YGPPGTGKTLLARACAAQ+ ATFLKLA   LVQMFIGDGA+LVRDAFALAK+KAP+IIFI
Sbjct: 213 YGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFI 272

Query: 339 DELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRS 398
           DELDAIGTKRFDSD+SGDRE QRTMLELLNQLDGF  +D V+VLAATNR D LD AL+RS
Sbjct: 273 DELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRS 332

Query: 399 GRLDRKIEFPHPDEAARARILRIHSRKMNV-HPDVSYEELARSTDDFNAAMLKAVCVEAG 457
           GRLDRKIEFP P E AR  +L+IH+RK+N  +  V++ ELARSTD+FN A LKAV VEAG
Sbjct: 333 GRLDRKIEFPLPSEEARESVLKIHARKLNCDNSSVNWRELARSTDEFNGAQLKAVTVEAG 392

Query: 458 MAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           M ALR  + ++ HEDF++ I  VQA+K  S+N+YA
Sbjct: 393 MIALRNGKSIIKHEDFVEAIGEVQARKSKSVNFYA 427


Score: 67 bits (164), Expect: 6.61523e-10
Length: 77, Idn/Pos/Gap = 36/53/0 (46%/68%/0%)

Query:  5 IPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPF 64
          I +EIL+ ST  I  R RL++N+++ +R E +RL  E   + ER+K+N+EKI  N QLP+
Sbjct: 15 IDQEILQSSTSDIMNRTRLLDNDIKVMRSESQRLTHEKTVMLERIKDNQEKINNNKQLPY 74

Query: 65 LVAHVVEVLTPAALKRA 81
          LV +VVE+L  +A K A
Sbjct: 75 LVGNVVELLDLSAEKEA 91

gb|AAS52935.1| AER254Wp [Ashbya gossypii ATCC 10895]
ref|NP_985111.1| AER254Wp [Eremothecium gossypii]
(460 aa)

Score: 446 bits (1147), Expect: 7.19321e-124
Length: 344, Idn/Pos/Gap = 235/281/2 (68%/81%/0%)

Query: 151 DDLDDAEED--EGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNK 208
           D+LDD  E   +G     D   +  A VVKTS+RQTVFLP+ GLVD  +L+P DLVGVNK
Sbjct: 117 DELDDTNESTTQGGNLNLDNAAKGYAAVVKTSSRQTVFLPMVGLVDPKQLKPNDLVGVNK 176

Query: 209 DSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERV 268
           DSYLIL+ LP E+D+RVKA EVD++PTE ++D+GGLDKQIEE++EA+VLPM     F+ +
Sbjct: 177 DSYLILDTLPSEFDSRVKAMEVDDKPTETYSDVGGLDKQIEELVEAIVLPMKQADKFKDM 236

Query: 269 GIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALA 328
           GI+ PKG LMYGPPGTGKTLLARACAAQT ATFLKLA   LVQMFIG+GA+LVRDAFALA
Sbjct: 237 GIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMFIGEGAKLVRDAFALA 296

Query: 329 KKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRP 388
           K+KAP+IIFIDELDAIGTKRFDS++SGDRE QRTMLELLNQLDGF  +D V+VLAATNR 
Sbjct: 297 KEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRV 356

Query: 389 DILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAM 448
           D+LD AL+RSGRLDRKIEFP P E ARA+IL+IHSRKM     ++++ELARSTD+FN A 
Sbjct: 357 DVLDPALLRSGRLDRKIEFPLPTEDARAQILQIHSRKMTSDDSINWQELARSTDEFNGAQ 416

Query: 449 LKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           LKAV VEAGM ALR  + V+ HEDF++ I  VQA+K  S+++YA
Sbjct: 417 LKAVSVEAGMIALRNGQSVIKHEDFVEAIGEVQARKTKSVSFYA 460

emb|CAA99315.1| YTA1 [Saccharomyces cerevisiae]
emb|CAA64037.1| YOR3258w [Saccharomyces cerevisiae]
emb|CAA62114.1| ORF O3258 [Saccharomyces cerevisiae]
emb|CAA51971.1| YTA1 [Saccharomyces cerevisiae]
sp|P33297|PRS6A_YEAST 26S protease regulatory subunit 6A (TAT-binding protein homolog 1) (TBP-1)
ref|NP_014760.1| One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; recruited to the GAL1-10 promoter region upon induction of transcription [Saccharomyces cerevisiae]
(434 aa)

Score: 443 bits (1139), Expect: 5.74394e-123
Length: 346, Idn/Pos/Gap = 235/285/4 (67%/82%/1%)

Query: 151 DDLDDAEEDEGAAQESDANQQSPAV----VVKTSTRQTVFLPIPGLVDVSELRPGDLVGV 206
           ++++D E  E   Q  + N  + AV    VVKTS+RQTVFLP+ GLVD  +L+P DLVGV
Sbjct:  89 NEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGV 148

Query: 207 NKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFE 266
           NKDSYLIL+ LP E+D+RVKA EVDE+PTE ++D+GGLDKQIEE++EA+VLPM     F+
Sbjct: 149 NKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFK 208

Query: 267 RVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFA 326
            +GI+ PKG LMYGPPGTGKTLLARACAAQT ATFLKLA   LVQM+IG+GA+LVRDAFA
Sbjct: 209 DMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFA 268

Query: 327 LAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATN 386
           LAK+KAP+IIFIDELDAIGTKRFDS++SGDRE QRTMLELLNQLDGF  +D V+VLAATN
Sbjct: 269 LAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATN 328

Query: 387 RPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNA 446
           R D+LD AL+RSGRLDRKIEFP P E +RA+IL+IHSRKM    D++++ELARSTD+FN 
Sbjct: 329 RVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNG 388

Query: 447 AMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           A LKAV VEAGM ALR  +  V HEDF++GI+ VQA+K  S+++YA
Sbjct: 389 AQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFYA 434

gb|EAA59335.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
ref|XP_408373.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
(465 aa)

Score: 441 bits (1134), Expect: 2.16456e-122
Length: 319, Idn/Pos/Gap = 229/267/0 (71%/83%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           DA +   + V+KTSTRQT++LP+ GLVD  +L+PGDL+GVNKDSYLIL+ LP EYD RVK
Sbjct: 139 DATRVGKSAVIKTSTRQTIYLPLIGLVDHEKLKPGDLIGVNKDSYLILDTLPAEYDNRVK 198

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
           A EVDE+PTE + DIGGLDKQIEE++EA+V PM     F+++GIK PKG LMYGPPGTGK
Sbjct: 199 AMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGK 258

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TLLARACAA+T ATFLKLAG  LVQMFIGDGA+LVRD FALAK+KAPSIIFIDELDA+GT
Sbjct: 259 TLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGT 318

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
           KRFDS++SGDRE QRTMLELLNQLDGF  +D ++VLAATNR D+LD AL+RSGRLDRKIE
Sbjct: 319 KRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIE 378

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           FP P+E ARA IL+IHSRKM V   V++ ELARSTD+F  A LKAVCVEAGM ALR    
Sbjct: 379 FPLPNEEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHS 438

Query: 467 VVIHEDFIDGIAAVQAKKK 485
            + HE+++D IA VQAKKK
Sbjct: 439 KIGHENYVDAIAEVQAKKK 457


Score: 60 bits (144), Expect: 1.40257e-07
Length: 61, Idn/Pos/Gap = 30/46/0 (49%/75%/0%)

Query:  13 STDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVAHVVEV  72
           ST  I +R R++ENE+R ++ E +RL  E  ++ E+VK+N+EKI+ N QLP+LV +VVE+
Sbjct:  61 STADIIKRRRMLENELRIMKSEYQRLTHEQNTMKEKVKDNQEKIENNRQLPYLVGNVVEL 120

Query:  73 L  73
           L
Sbjct: 121 L 121

emb|CAA71487.1| TBP6 protein [Xenopus laevis]
sp|O42587|PR6A1_XENLA 26S protease regulatory subunit 6A (TAT-binding protein 6) (TBP-6)
(405 aa)

Score: 439 bits (1129), Expect: 8.7931e-122
Length: 311, Idn/Pos/Gap = 233/263/1 (74%/84%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct:  84 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 142

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 143 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 202

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 203 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 262

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DIL
Sbjct: 263 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDIL 322

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR      A   K 
Sbjct: 323 DPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQ 382

Query: 452 VCVEAGMAALR 462
             VEAGM ALR
Sbjct: 383 FGVEAGMIALR 393


Score: 69 bits (168), Expect: 2.7777e-10
Length: 70, Idn/Pos/Gap = 31/55/0 (44%/78%/0%)

Query:  4 GIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLP 63
          G+ EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  LP
Sbjct: 12 GLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLP 71

Query: 64 FLVAHVVEVL 73
          +LV++V+E+L
Sbjct: 72 YLVSNVIELL 81

gb|EAL51726.1| 26S protease regulatory subunit, putative [Entamoeba histolytica HM-1:IMSS]
gb|EAL43791.1| 26S protease regulatory subunit, putative [Entamoeba histolytica HM-1:IMSS]
(422 aa)

Score: 437 bits (1123), Expect: 4.588e-121
Length: 341, Idn/Pos/Gap = 224/274/0 (65%/80%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           DL   E D+G+  ++  N  +  VV+ TS R  VFLP+ GLV+V +L+PGDLVGVNKD+Y
Sbjct:  82 DLPPEESDDGSGLDNKGNVGTKGVVINTSMRSNVFLPVSGLVNVKDLKPGDLVGVNKDTY 141

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILEKLP++YD RVK+ EV ERPTE + D+GGLDK+++E+IEA+VLPMT K  FE++GI+
Sbjct: 142 LILEKLPQQYDGRVKSMEVIERPTETYNDVGGLDKEMKEMIEAIVLPMTQKEKFEKLGIQ 201

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
            PKGVL+YGPPGTGKTL+ARACAAQTK+TFLKLA   LV   IGDG+R++R+ F LAK K
Sbjct: 202 TPKGVLLYGPPGTGKTLMARACAAQTKSTFLKLAAPQLVSSSIGDGSRIIREMFELAKSK 261

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
           AP+IIFIDE+DAIGTKR +S+ SGDRE QRTMLELLNQLDGF + DDVRV+AATNR D+L
Sbjct: 262 APAIIFIDEIDAIGTKRTESEHSGDREIQRTMLELLNQLDGFSKTDDVRVIAATNRIDVL 321

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D AL+RSGR DRKIEFP P+E AR  IL+IHS+K+    D+++EELARST DFN A LKA
Sbjct: 322 DPALLRSGRFDRKIEFPTPNEEARVHILQIHSKKLKCSDDINFEELARSTQDFNGAQLKA 381

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           VCVEAGM ALR +   + HEDF  GI  VQ+KKK SL Y+A
Sbjct: 382 VCVEAGMIALRREAIEIRHEDFQQGILEVQSKKKKSLTYFA 422


Score: 54 bits (130), Expect: 6.90505e-06
Length: 66, Idn/Pos/Gap = 26/49/0 (39%/74%/0%)

Query:  8 EILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLVA 67
          ++L  S + I Q+ + +E +   +R E ER+R+E+  +N++ KE++EKI++ A+LPFL++
Sbjct: 16 DVLSLSNEEIKQQIKQMERQEGVIRHEHERIRQELAVINKQNKESKEKIEMFAKLPFLIS 75

Query: 68 HVVEVL 73
          +VVE+L
Sbjct: 76 NVVEIL 81

emb|CAH99786.1| 26S protease subunit regulatory subunit 6a, putative [Plasmodium berghei]
(379 aa)

Score: 425 bits (1093), Expect: 1.44026e-117
Length: 417, Idn/Pos/Gap = 238/290/49 (57%/69%/11%)

Query:   7 EEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPFLV  66
           EEI   S   I  R  LI+ E++ L+ E  RL+ E +++ E++K+N EKI LN  LP+LV
Sbjct:  12 EEIEVLSNPEIRTRISLIDTEIKILKNEHTRLKNEYKNIQEKIKDNVEKIHLNKMLPYLV  71

Query:  67 AHVVEVLTPAALKRAPPSLTGPGTQSAPHAETALATQPNGSVSETQGEARNQRLGSGARG 126
           A+VVE L           L     +  P  E  L   PN + +   G         G R 
Sbjct:  72 ANVVESL----------DLQDEEDEQEPKDEYDLYDNPNITNNNIYGNISKNIPEEGFR- 120

Query: 127 GSDLINRSSGITSETQTPGAADHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVF 186
                                    D+DD              ++   +V+KTSTRQT+F
Sbjct: 121 -------------------------DIDD-------------EKRGKCMVIKTSTRQTIF 142

Query: 187 LPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDK 246
           LP+PGL++ SEL+PGDLVGVNKDSYLI++KLP EYD RVKA EV E+PTED++DIGGLDK
Sbjct: 143 LPVPGLIEASELKPGDLVGVNKDSYLIIDKLPPEYDNRVKAMEVIEKPTEDYSDIGGLDK 202

Query: 247 QIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG 306
           QIE+++EA+VLPM HK  FE++GIKPPKGVLM+GPPGTGKTLLARACA+QT ATFLKLAG
Sbjct: 203 QIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAG 262

Query: 307 TSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLEL 366
             LVQMFIGDGA++VRDAF LAK+KAP+IIFIDELDAIGTKRFDS+ SGDRE QRTMLEL
Sbjct: 263 PQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLEL 322

Query: 367 LNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHS 423
           LNQLDGF  ++ V+V+AATNRPD LD AL+RSGRLDRKIE PHP+E +RARIL+IHS
Sbjct: 323 LNQLDGFSTDETVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHS 379

ref|XP_585224.1| PREDICTED: similar to PSMC3 protein, partial [Bos taurus]
(443 aa)

Score: 420 bits (1079), Expect: 5.38397e-116
Length: 306, Idn/Pos/Gap = 225/254/8 (73%/83%/2%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D +D EED GA  + D+ ++    V+KTSTRQT FLP+ GLVD  +L+PGDLVGVNKDSY
Sbjct: 145 DPNDQEED-GANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSY 203

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILE LP EYD+RVKA EVDERPTE ++DIGGLDKQI+E++EA+VLPM HK  FE +GI+
Sbjct: 204 LILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQ 263

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+K
Sbjct: 264 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 323

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRV-LAATNRPDI 390
           APSIIFIDELDAIGTKRFDS+++GDRE QRTMLELLNQLDGF  N  V+V +  T     
Sbjct: 324 APSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVGVVFTGEEGA 383

Query: 391 LDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLK 450
           L       GRLDRKIEFP P+E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  K
Sbjct: 384 L------RGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCK 437

Query: 451 AVCVEA 456
           AVCVEA
Sbjct: 438 AVCVEA 443


Score: 70 bits (170), Expect: 1.34409e-10
Length: 72, Idn/Pos/Gap = 32/56/0 (44%/77%/0%)

Query:   2 ERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQ  61
           + GI EE+L+ ST+ I QR RL+++E++ ++ E  R+  E+Q++ +++KEN EKIK+N  
Sbjct:  71 QDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKT 130

Query:  62 LPFLVAHVVEVL  73
           LP+LV++V+E+L
Sbjct: 131 LPYLVSNVIELL 142

gb|AAF91247.1| proteasome regulatory ATPase subunit 5 [Trypanosoma brucei]
(445 aa)

Score: 414 bits (1065), Expect: 2.6952e-114
Length: 346, Idn/Pos/Gap = 223/276/3 (64%/79%/0%)

Query: 148 DHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVN 207
           D E D  D EE     ++S   Q+S   ++KTS+RQTVFLP+ GLVD ++L P DLVGVN
Sbjct: 102 DLEADDQDVEELNVGKKKSRHPQKS--AIIKTSSRQTVFLPVVGLVDANKLSPQDLVGVN 159

Query: 208 KDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFER 267
           KD++L+LE+LP EYD+RVKA E+ E+P E + D+GGLDKQI E+IEAVVLP+T K  + R
Sbjct: 160 KDTFLVLEELPPEYDSRVKAMEIVEKPKEKYTDVGGLDKQINEMIEAVVLPITEKEKYVR 219

Query: 268 VGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFAL 327
           +GIKPPKGVL+YG PGTGKT+LARACAA T A FL+LAG  LVQM+IG+GAR++RDAFAL
Sbjct: 220 IGIKPPKGVLLYGSPGTGKTMLARACAASTDACFLRLAGPQLVQMYIGEGARILRDAFAL 279

Query: 328 AKKKAPSIIFIDELDAIGTKRFDS-DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATN 386
           AKK+AP+IIFIDELDAIG++R D   + G RE QR MLELL+ LDGF   DDV+V+AATN
Sbjct: 280 AKKRAPTIIFIDELDAIGSRRSDEGSKHGSREVQRRMLELLSLLDGFGSTDDVKVIAATN 339

Query: 387 RPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNA 446
           R D+LD AL+R GR+DRK+EF  PDE ARA IL+IHSR+M +H DV++EE++R T+D N 
Sbjct: 340 RIDVLDPALLRRGRIDRKVEFTLPDEEARAHILQIHSRRMALHGDVNFEEISRMTEDMNG 399

Query: 447 AMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           A LKAVCVEAGM ALR +R  V HEDF +G+ AVQA+KK SLNYYA
Sbjct: 400 AQLKAVCVEAGMLALRNERVYVAHEDFAEGVTAVQARKKSSLNYYA 445

dbj|BAD36043.1| putative 26S proteasome regulatory particle triple-A ATPase subunit5a [Oryza sativa (japonica cultivar-group)]
(265 aa)

Score: 406 bits (1043), Expect: 9.27135e-112
Length: 264, Idn/Pos/Gap = 207/235/0 (78%/89%/0%)

Query: 229 EVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTL 288
           EVDE+PTED+ DIGGL+KQI+E++EA+VLPMTHK  F+++GI+PPKGVL+YGPPGTGKTL
Sbjct:   2 EVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTL  61

Query: 289 LARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKR 348
           +ARACAAQT ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+K+P IIFIDE+DAIGTKR
Sbjct:  62 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR 121

Query: 349 FDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFP 408
           FDS+ SGDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD ALMRSGRLDRKIEFP
Sbjct: 122 FDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFP 181

Query: 409 HPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVV 468
           HP E ARARIL+IHSRKMNV+PDV++EELARSTDDFN A LKAVCVEAGM ALR D   V
Sbjct: 182 HPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV 241

Query: 469 IHEDFIDGIAAVQAKKKMSLNYYA 492
            HEDF +GI  VQAKKK SLNYYA
Sbjct: 242 THEDFNEGIIQVQAKKKSSLNYYA 265

gb|AAX69650.1| proteasome regulatory ATPase subunit 5 [Trypanosoma brucei]
(445 aa)

Score: 403 bits (1036), Expect: 5.25849e-111
Length: 346, Idn/Pos/Gap = 225/278/3 (65%/80%/0%)

Query: 148 DHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVN 207
           D E D  D EE     ++S   Q+S   ++KTS+RQTVFLP+ GLVD ++L P DLVGVN
Sbjct: 102 DLEADDQDVEELNVGKKKSRHPQKS--AIIKTSSRQTVFLPVVGLVDANKLSPQDLVGVN 159

Query: 208 KDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFER 267
           KD++L+LE+LP EYD+RVKA E+ E+P E + D+GGLDKQI E+IEAVVLP+T K  + R
Sbjct: 160 KDTFLVLEELPPEYDSRVKAMEIVEKPKEKYTDVGGLDKQINEMIEAVVLPITEKEKYVR 219

Query: 268 VGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFAL 327
           +GIKPPKGVL+YG PGTGKT+LARACAA T A FL+LAG  LVQM+IG+GAR++RDAFAL
Sbjct: 220 IGIKPPKGVLLYGSPGTGKTMLARACAAATDACFLRLAGPQLVQMYIGEGARILRDAFAL 279

Query: 328 AKKKAPSIIFIDELDAIGTKRFDS-DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATN 386
           AKK+AP+IIFIDELDAIG++R D   + G RE QRTMLELL+ LDGF   DDV+V+AATN
Sbjct: 280 AKKRAPTIIFIDELDAIGSRRSDEGSKHGSREVQRTMLELLSLLDGFGSTDDVKVIAATN 339

Query: 387 RPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNA 446
           R D+LD AL+RSGR+DRK+EF  PDE ARA IL+IHSR+M +H DV++EE++R T+D N 
Sbjct: 340 RIDVLDPALLRSGRIDRKVEFTLPDEEARAHILQIHSRRMALHGDVNFEEISRMTEDMNG 399

Query: 447 AMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           A LKAVCVEAGM ALR +R  V HEDF +G+ AVQA+KK SLNYYA
Sbjct: 400 AQLKAVCVEAGMLALRNERVYVAHEDFAEGVTAVQARKKSSLNYYA 445

emb|CAD25861.1| 26S PROTEASOME REGULATORY SUBUNIT 6A (TAT-BINDING PROTEIN 1) [Encephalitozoon cuniculi GB-M1]
ref|NP_586257.1| 26S PROTEASOME REGULATORY SUBUNIT 6A (TAT-BINDING PROTEIN 1) [Encephalitozoon cuniculi GB-M1]
(401 aa)

Score: 398 bits (1022), Expect: 2.61052e-109
Length: 318, Idn/Pos/Gap = 204/256/2 (64%/80%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKA--FEVDER 233
           VV  STR + +LPI GL+  SELRPGDLV ++KD+ ++ EKLP +YD +V     + D +
Sbjct:  83 VVNASTRMSSYLPITGLIPNSELRPGDLVALHKDTNIVFEKLPPDYDMKVGGMVLKSDAK 142

Query: 234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC 293
           P E + DIGGL++QIEE+ EA+VL +TH   FE++ IKPPKGVLMYGPPGTGKTL+ARAC
Sbjct: 143 PDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYGPPGTGKTLMARAC 202

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A++T ATFLKLAG  LVQM+IGDGARLVRDAFALAK++ P+IIFIDE+DAIG KR DSD+
Sbjct: 203 ASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTIIFIDEIDAIGAKRSDSDQ 262

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GDRE QRTMLELLNQLDGF  +++V+++AATNR DILD AL+RSGRLDRKIEFP P+  
Sbjct: 263 TGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTL 322

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            R RIL+IH+RKM+V  DV+++ELARST+ FN A  KAVCVEAGMAALR ++  +   DF
Sbjct: 323 GRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDF 382

Query: 474 IDGIAAVQAKKKMSLNYY 491
           +DGI  V ++KK  L Y+
Sbjct: 383 MDGIQEVLSRKKSKLLYF 400


Score: 48 bits (115), Expect: 0.000345665
Length: 73, Idn/Pos/Gap = 26/45/4 (35%/61%/5%)

Query:  1 MERGIPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNA 60
          M++  P E L    + + ++ R++ +E R L+     ++ +I + N  + EN E+I+LN 
Sbjct:  9 MDQSNPGEFL----ERVREKIRMLNSETRILQSRVNTIKHDISTKNASIAENMERIRLNK 64

Query: 61 QLPFLVAHVVEVL 73
          QLP+LV +VVEVL
Sbjct: 65 QLPYLVGNVVEVL 77

emb|CAC27088.1| 26S protease regulatory SU 6A [Guillardia theta]
ref|NP_113519.1| 26S protease regulatory SU 6A [Guillardia theta]
pir||F90114 26S protease regulatory SU 6A [imported] - Guillardia theta nucleomorph
(397 aa)

Score: 375 bits (963), Expect: 1.85797e-102
Length: 324, Idn/Pos/Gap = 180/240/0 (55%/74%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           + N++   +++KTS R  +FL   GL+D   L    + GVNKDSY ++ +LP EYD RV+
Sbjct:  72 NQNRKIDGIILKTSNRLNIFLSNEGLIDKKNLNLNSIYGVNKDSYYLISRLPPEYDFRVR 131

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
           A EVDE P + + DIGGLD QI+E+IEA+VLP+T    F ++GI  PKGVL+YGPPG GK
Sbjct: 132 AMEVDENPNQTYQDIGGLDNQIQELIEAIVLPLTQIIKFNKIGIIAPKGVLLYGPPGMGK 191

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TLLARACA+QT A F K+ G +LVQM+IG+GA LVR+ F  AK+  PSIIFIDE+DAIG 
Sbjct: 192 TLLARACASQTNAKFFKIGGPNLVQMYIGEGASLVRETFKYAKETQPSIIFIDEIDAIGM 251

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
           KR  SD +GD E QRTMLELLNQLDGF  N +V+++AATNR DILD AL+RSGRLDRKIE
Sbjct: 252 KRSISDSNGDHEVQRTMLELLNQLDGFSLNSNVKIIAATNRIDILDPALLRSGRLDRKIE 311

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           FP+P   +R +IL+IH RK+ +   +   E+A+ T++FN A LKA+CVEAG+ A+R  +K
Sbjct: 312 FPYPTLGSRLKILKIHCRKIRISEYLELLEIAKITENFNGAQLKALCVEAGIIAIRKHKK 371

Query: 467 VVIHEDFIDGIAAVQAKKKMSLNY 490
           +VI++DF++    ++ +K + L Y
Sbjct: 372 IVIYDDFMEAFLKIKYRKDVQLKY 395

ref|XP_471556.1| OSJNBa0019J05.17 [Oryza sativa (japonica cultivar-group)]
emb|CAD40219.2| OSJNBa0019J05.17 [Oryza sativa (japonica cultivar-group)]
(357 aa)

Score: 336 bits (861), Expect: 1.24915e-90
Length: 300, Idn/Pos/Gap = 177/216/27 (59%/72%/9%)

Query: 182 RQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADI 241
           R+ +F PI G+V  S+L+PGDL+GV+  S                         E +  I
Sbjct:  81 RKIIFRPIAGVVYPSKLKPGDLIGVDSTS------------------------NEHYCGI 116

Query: 242 GGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATF 301
           GGL+KQIEE++EAVVLP+ HK+ F+R+GI PPKGVL+YGPPGTGKTL+A A A+QT ATF
Sbjct: 117 GGLEKQIEELVEAVVLPIIHKNCFQRLGIHPPKGVLLYGPPGTGKTLVAHAFASQTNATF 176

Query: 302 LKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQR 361
           LKL G  L    IG+GARLVRDAF LAK+KAP IIFIDE+DAIG+K FD   SGDRE Q+
Sbjct: 177 LKLTGPQLAVKLIGEGARLVRDAFQLAKEKAPCIIFIDEIDAIGSKHFD---SGDREVQQ 233

Query: 362 TMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRI 421
           T++ELLNQLDG    + ++V+AATNRP++LD A +RSGRLD+KIEFPHP E AR RIL I
Sbjct: 234 TIVELLNQLDGVGSYESIKVIAATNRPEVLDPAFLRSGRLDQKIEFPHPSEQARVRILEI 293

Query: 422 HSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQ 481
           HSRKM+ +PDV++EELA  TDDFN A LKAVC EA M A   D   V HEDF+  IA V+
Sbjct: 294 HSRKMDKNPDVNFEELACCTDDFNGAQLKAVCFEASMLAFHRDATEVRHEDFVRAIAQVK 353

ref|XP_510114.1| PREDICTED: similar to protease (prosome, macropain) 26S subunit, ATPase 1 [Pan troglodytes]
(1032 aa)

Score: 325 bits (832), Expect: 2.49893e-87
Length: 310, Idn/Pos/Gap = 160/218/0 (51%/70%/0%)

Query:  176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT  235
            +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct:  714 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ  773

Query:  236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA  295
            E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct:  774 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN  833

Query:  296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG  355
            QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct:  834 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG  893

Query:  356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR  415
            +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct:  894 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK  953

Query:  416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID  475
             RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct:  954 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 1013

Query:  476 GIAAVQAKKK  485
                V  KK+
Sbjct: 1014 SKENVLYKKQ 1023

gb|EAL42841.1| 26s protease regulatory subunit [Entamoeba histolytica HM-1:IMSS]
(288 aa)

Score: 320 bits (819), Expect: 9.11057e-86
Length: 238, Idn/Pos/Gap = 158/195/0 (66%/81%/0%)

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
           D    E D+G+  ++  N  +  VV+ TS R  VFLP+ GLV+V +L+PGDLVGVNKD+Y
Sbjct:  51 DCPPEESDDGSGLDNKGNVGTKGVVINTSMRSNVFLPVSGLVNVKDLKPGDLVGVNKDTY 110

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
           LILEKLP++YD RVK+ EV ERPTE + D+GGLDK+++E+IEA+VLPMT K  FE++GI+
Sbjct: 111 LILEKLPQQYDGRVKSMEVIERPTETYNDVGGLDKEMKEMIEAIVLPMTQKEKFEKLGIQ 170

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
            PKGVL+YGPPGTGKTL+ARACAAQTK+TFLKLA   LV   IGDG+R++R+ F LAK K
Sbjct: 171 TPKGVLLYGPPGTGKTLMARACAAQTKSTFLKLAAPQLVSSSIGDGSRIIREMFELAKSK 230

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
           AP+IIFIDE+DAIGTKR +S+ SGDRE QRTMLELLNQLDGF + DDVRV+AATNR D
Sbjct: 231 APAIIFIDEIDAIGTKRTESEHSGDREIQRTMLELLNQLDGFSKTDDVRVIAATNRID 288

ref|NP_248170.1| proteasome regulatory AAA-ATPase [Methanocaldococcus jannaschii DSM 2661]
gb|AAB99179.1| proteasome regulatory AAA-ATPase [Methanocaldococcus jannaschii DSM 2661]
pir||G64446 ATP-dependent 26S proteosome regulatory subunit 4 homolog - Methanococcus jannaschii
sp|Q58576|PSMR_METJA Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(430 aa)

Score: 317 bits (811), Expect: 7.77718e-85
Length: 299, Idn/Pos/Gap = 164/218/0 (54%/72%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           VVVK+ST  +  + +   V+  +L PG  V +N+ +  +++ LPE  D R KA EVDERP
Sbjct: 106 VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERP 165

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              + DIGGL+KQ++E+ E V LP+ H  LFE+VGI+PPKG+L+YGPPGTGKTLLA+A A
Sbjct: 166 NVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA 225

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T ATF+++ G+ LV+ FIG+GA LV+D F LAK+KAPSIIFIDE+DAI  KR D+   
Sbjct: 226 TETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG 285

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GDRE QRT+++LL ++DGFD   DV+++ ATNRPDILD A++R GR DR IE P PDE  
Sbjct: 286 GDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKG 345

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           R  IL+IH+RKMN+  DV+ EE+A+ T+    A LKA+C EAGM A+R  R  V  +DF
Sbjct: 346 RLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDF 404

gb|EAA42075.1| GLP_254_8066_6561 [Giardia lamblia ATCC 50803]
(501 aa)

Score: 315 bits (806), Expect: 2.33961e-84
Length: 522, Idn/Pos/Gap = 208/297/66 (39%/56%/12%)

Query:   5 IPEEILRESTDAIAQRARLIENEVRELRREEERLRREIQSLNERVKENEEKIKLNAQLPF  64
           I  EI       ++QR   I++E   LRRE ER +  I+     +++N   ++ + +LP 
Sbjct:  10 IDPEIQSFDDAMLSQRIEAIKSEAMFLRREHERYQSIIREATGLLEKNRRDLENSKRLPL  69

Query:  65 LVAHVVEVLTPAALKRAPPSLTGPGTQSAPHAETALATQPNGSVSETQGEARNQRLGSGA 124
           LVA V E +                  S  H         N  V+ T  +   ++L S  
Sbjct:  70 LVATVSEFVEI----------------SEDHLNL------NYEVTATTKKTYERQLKS-- 105

Query: 125 RGGSDLINRSSGITSETQTPG--AADHEDDLDDAE--------EDEGAAQESDANQQSPA 174
                LI+R S  T++       A   E++  D++        E   A +   ++  +  
Sbjct: 106 -----LIDRDSESTAKNTDSSLEAMLKEEEFADSDRATLGLDGEVTQALRSKPSSTVTEG 160

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V++KTS++  VFL   G V    LRP DLV VNKD+Y I EKLP   DARVK  EV ERP
Sbjct: 161 VIIKTSSKTYVFLASTGAVPRKMLRPTDLVAVNKDTYFIYEKLPSAVDARVKTMEVTERP 220

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
            + F D+GG+D+QI ++ E+ +LP+    L +++GIKP KGVL+YG PGTGKT LARA A
Sbjct: 221 MDKFEDLGGIDQQISQIKESFLLPLQRPDLLKKIGIKPSKGVLLYGVPGTGKTALARALA 280

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKK------------KAPSIIFIDELD 342
            +   +FL+L  T LVQ++IGDG+ +V + F LAK              A  II+IDE+D
Sbjct: 281 HEANCSFLQLTATQLVQLYIGDGSAMVIETFNLAKSLIEKERTLKGNMDAGCIIYIDEID 340

Query: 343 AIGTKRFDSDRSG-DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRL 401
           AIG +R  SD  G DR++ RTML LLN LDGFD ++ ++VLA+TNR DILD AL RSGR 
Sbjct: 341 AIGGRR--SDTGGYDRDSTRTMLTLLNCLDGFDCDERIKVLASTNRVDILDPALTRSGRF 398

Query: 402 DRKIEFPHPDEAARARILRIHSRKMNV-----HPD-------VSYEELARSTDDFNAAML 449
           DRKIEF +P+E  R  IL IHS+K+ +      P+       V  +E+A+ST++++ AML
Sbjct: 399 DRKIEFTYPNEKGRYDILCIHSKKIKLIGRSDDPETCDRPGAVGLQEIAKSTNEYSGAML 458

Query: 450 KAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYY 491
           KAVC+EAG+  LR   + V+HEDF++ I  V  K++  ++Y+
Sbjct: 459 KAVCMEAGLVCLRRHGEAVVHEDFVEAINIVSGKREGEMSYF 500

ref|NP_148323.1| 26S protease regulatory subunit [Aeropyrum pernix K1]
dbj|BAA81022.1| 409aa long hypothetical 26S protease regulatory subunit [Aeropyrum pernix K1]
sp|Q9YAC7|PSMR_AERPE Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(409 aa)

Score: 309 bits (792), Expect: 1.14225e-82
Length: 308, Idn/Pos/Gap = 165/219/0 (53%/71%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           VVVK+ST   + + +   VD   L+PG +V +N     I++ LP  YD  VKA EV+ERP
Sbjct:  75 VVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERP 134

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              F D+GGL++QI E+ EAVVLP+ + HLF  +GI PPKGVL++GPPGTGKTLLA+A A
Sbjct: 135 KVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVA 194

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T+ATF+++ G+ LV  FIG+GARLVR+ F LA++KAPSI+FIDE+DAI +KR D   S
Sbjct: 195 GETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTS 254

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GDRE QRTML+LL +LDGFD  D+V+V+AATNR D++D A++R GR DR IE P P    
Sbjct: 255 GDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRG 314

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL IH+RK  + PDV  E +A+ T+ F+ A LKAV VEAG  A+R   +V+  +D I
Sbjct: 315 RLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMI 374

Query: 475 DGIAAVQA 482
             +  V+A
Sbjct: 375 KAVEKVKA 382

gb|AAH67741.1| Proteasome 26S ATPase subunit 1 [Homo sapiens]
(440 aa)

Score: 307 bits (787), Expect: 3.7981e-82
Length: 310, Idn/Pos/Gap = 160/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

ref|NP_070800.1| 26S protease regulatory subunit 4 [Archaeoglobus fulgidus DSM 4304]
gb|AAB89280.1| 26S protease regulatory subunit 4 [Archaeoglobus fulgidus DSM 4304]
pir||G69496 ATP-dependent 26S proteinase regulatory subunit 4 homolog - Archaeoglobus fulgidus
sp|O28303|PSMR_ARCFU Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(398 aa)

Score: 307 bits (787), Expect: 3.927e-82
Length: 309, Idn/Pos/Gap = 167/214/0 (54%/69%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           VVVK+ST     +     ++  EL+PG  V +N+ +  I+  LP   D  V  FEV+E+P
Sbjct:  77 VVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKP 136

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              + DIGGLD QIEE+ EAV LP+    LF  VGI+PPKGVL+YGPPGTGKTLLA+A A
Sbjct: 137 EVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVA 196

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            QT+ATF+++ G+  VQ +IG+GARLVR+ F LAK+KAPSIIFIDELDAI  +R +SD S
Sbjct: 197 NQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTS 256

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GDRE QRTM++LL +LDGFD   DV+V+ ATNR DILD A++R GR DR IE P P    
Sbjct: 257 GDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEG 316

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +I +IH+RKM +  DV ++ELAR T+  + A +KA+C EAGM A+R +R  V   DF 
Sbjct: 317 RIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFT 376

Query: 475 DGIAAVQAK 483
             I  V  K
Sbjct: 377 KAIEKVLKK 385

ref|NP_001014855.1| hypothetical protein LOC506238 [Bos taurus]
gb|AAX09000.1| proteasome 26S ATPase subunit 1 [Bos taurus]
(440 aa)

Score: 307 bits (787), Expect: 4.34055e-82
Length: 310, Idn/Pos/Gap = 160/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

gb|AAA35484.1| 26S protease (S4) regulatory subunit
(440 aa)

Score: 307 bits (786), Expect: 5.52879e-82
Length: 310, Idn/Pos/Gap = 160/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

ref|NP_476464.1| peptidase (prosome, macropain) 26S subunit, ATPase 1 [Rattus norvegicus]
gb|AAP88828.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Homo sapiens]
ref|NP_032973.1| protease (prosome, macropain) 26S subunit, ATPase 1 [Mus musculus]
ref|XP_537536.1| PREDICTED: similar to protease (prosome, macropain) 26S subunit, ATPase 1 [Canis familiaris]
gb|AAX41703.1| proteasome 26S subunit 1 [synthetic construct]
gb|AAX41702.1| proteasome 26S subunit 1 [synthetic construct]
gb|AAX41701.1| proteasome 26S subunit 1 [synthetic construct]
gb|AAH73818.1| Proteasome 26S ATPase subunit 1 [Homo sapiens]
gb|AAH03860.1| Protease (prosome, macropain) 26S subunit, ATPase 1 [Mus musculus]
gb|AAH00512.1| Proteasome 26S ATPase subunit 1 [Homo sapiens]
gb|AAH63157.1| Peptidase (prosome, macropain) 26S subunit, ATPase 1 [Rattus norvegicus]
sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S subunit ATPase 1)
sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S subunit ATPase 1)
sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S subunit ATPase 1)
gb|AAB34137.1| P26s4 [Mus musculus]
dbj|BAC40339.1| unnamed protein product [Mus musculus]
dbj|BAA09341.1| proteasomal ATPase (S4) [Rattus norvegicus]
emb|CAG33325.1| PSMC1 [Homo sapiens]
ref|NP_002793.2| proteasome 26S ATPase subunit 1 [Homo sapiens]
(440 aa)

Score: 307 bits (786), Expect: 5.52879e-82
Length: 310, Idn/Pos/Gap = 160/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

pir||A44468 26S proteasome regulatory chain 4 [validated] - human
(440 aa)

Score: 307 bits (786), Expect: 5.52879e-82
Length: 310, Idn/Pos/Gap = 160/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

gb|EAL27924.1| GA18789-PA [Drosophila pseudoobscura]
(439 aa)

Score: 307 bits (786), Expect: 6.00989e-82
Length: 310, Idn/Pos/Gap = 159/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD  +L PG  V +N   + ++  L ++ D  V   ++++ P 
Sbjct: 121 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQ 180

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DA+GTKR+DS+  G
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGG 300

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 301 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI  IH+ +M +  DV+  EL  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 361 RRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420

Query: 476 GIAAVQAKKK 485
              +V  +KK
Sbjct: 421 SKESVLYRKK 430

emb|CAG00116.1| unnamed protein product [Tetraodon nigroviridis]
(440 aa)

Score: 306 bits (785), Expect: 6.92578e-82
Length: 310, Idn/Pos/Gap = 161/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M V  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 RRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

ref|NP_700555.1| 26S proteasome regulatory subunit 4, putative [Plasmodium falciparum 3D7]
gb|AAN35279.1| 26S proteasome regulatory subunit 4, putative [Plasmodium falciparum 3D7]
(455 aa)

Score: 306 bits (785), Expect: 7.34234e-82
Length: 298, Idn/Pos/Gap = 152/209/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           ++ TS     ++ I   VD   L PG  V +N  +  ++  L +E D  V   +V++ P 
Sbjct: 137 IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPL 196

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 197 ESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 256

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +T ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DA+GTKR+++   G
Sbjct: 257 ETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGG 316

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR D LD AL+R GR+DRKI+ P+PD   +
Sbjct: 317 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTK 376

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            RI +IH+ KM + PDV  EE   S D+ + A +KA+C EAG+ ALR  R  +   D 
Sbjct: 377 RRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADL 434

gb|AAH16368.1| Proteasome 26S ATPase subunit 1 [Homo sapiens]
(440 aa)

Score: 306 bits (784), Expect: 8.39098e-82
Length: 310, Idn/Pos/Gap = 160/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

gb|EAA08276.2| ENSANGP00000017106 [Anopheles gambiae str. PEST]
gb|EAA08278.2| ENSANGP00000017098 [Anopheles gambiae str. PEST]
gb|EAA08387.2| ENSANGP00000014726 [Anopheles gambiae str. PEST]
gb|EAA08386.2| ENSANGP00000014769 [Anopheles gambiae str. PEST]
ref|XP_312924.2| ENSANGP00000014726 [Anopheles gambiae str. PEST]
ref|XP_312923.2| ENSANGP00000014769 [Anopheles gambiae str. PEST]
ref|XP_312720.2| ENSANGP00000017106 [Anopheles gambiae str. PEST]
ref|XP_312719.2| ENSANGP00000017098 [Anopheles gambiae str. PEST]
(438 aa)

Score: 306 bits (784), Expect: 8.46128e-82
Length: 310, Idn/Pos/Gap = 159/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD  +L PG  V +N   + ++  L ++ D  V   ++++ P 
Sbjct: 120 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVTVMKLEKAPQ 179

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 180 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 239

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DA+GTKR+DS+  G
Sbjct: 240 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGG 299

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 300 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 359

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI  IH+ +M +  DV+  EL  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 360 RRIFNIHTARMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 419

Query: 476 GIAAVQAKKK 485
              +V  +KK
Sbjct: 420 SKESVLYRKK 429

dbj|BAD96388.1| proteasome 26S ATPase subunit 1 variant [Homo sapiens]
(440 aa)

Score: 306 bits (784), Expect: 8.89566e-82
Length: 310, Idn/Pos/Gap = 160/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

ref|NP_524469.2| CG5289-PA [Drosophila melanogaster]
gb|AAF56205.1| CG5289-PA [Drosophila melanogaster]
gb|AAL13988.1| SD02658p [Drosophila melanogaster]
sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 (P26s4)
(439 aa)

Score: 306 bits (784), Expect: 1.01661e-81
Length: 310, Idn/Pos/Gap = 159/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD  +L PG  V +N   + ++  L ++ D  V   ++++ P 
Sbjct: 121 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQ 180

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DA+GTKR+DS+  G
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGG 300

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 301 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI  IH+ +M +  DV+  EL  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 361 RRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420

Query: 476 GIAAVQAKKK 485
              +V  +KK
Sbjct: 421 SKESVLYRKK 430

ref|NP_990289.1| 26S ATPase complex subunit 4 [Gallus gallus]
gb|AAC60013.1| 26S ATPase complex subunit 4 [Gallus gallus]
sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S subunit ATPase 1)
pir||S74197 ATP-dependent 26S proteinase regulatory subunit 4 - chicken
(440 aa)

Score: 306 bits (783), Expect: 1.3728e-81
Length: 298, Idn/Pos/Gap = 156/213/0 (52%/71%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   ++++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++  PSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            RI +IH+ +M +  DV+ +EL  + DD + A +KA+C EAG+ ALR  R  V +EDF
Sbjct: 362 KRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419

gb|AAB34134.1| P26s4 [Drosophila melanogaster]
(439 aa)

Score: 305 bits (781), Expect: 2.15419e-81
Length: 310, Idn/Pos/Gap = 159/218/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD  +L PG  V +N   + ++  L ++ D  V   ++++ P 
Sbjct: 121 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTMMKLEKAPQ 180

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DA+GTKR+DS+  G
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGG 300

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 301 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI  IH+ +M +  DV+  EL  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 361 RRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420

Query: 476 GIAAVQAKKK 485
              +V  +KK
Sbjct: 421 SKESVLYRKK 430

emb|CAH68890.1| novel protein similar to proteasome (prosome, macropain) 26S subunit ATPase 1 (psmc1) [Danio rerio]
gb|AAH71538.1| Zgc:86923 [Danio rerio]
ref|NP_001002091.1| hypothetical protein LOC415181 [Danio rerio]
(440 aa)

Score: 304 bits (778), Expect: 4.1644e-81
Length: 310, Idn/Pos/Gap = 161/217/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M V  DVS ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 RRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

gb|EAA18347.1| 26S proteasome subunit 4-like protein [Plasmodium yoelii yoelii]
(447 aa)

Score: 303 bits (777), Expect: 6.21566e-81
Length: 298, Idn/Pos/Gap = 152/208/0 (51%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           ++ TS     ++ I   VD   L PG  V +N  +  ++  L +E D  V   +V++ P 
Sbjct: 129 IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPL 188

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YGPPGTGKTLLA+A A 
Sbjct: 189 ESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 248

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +T ATFL++ G+ L+Q ++GDG +LVR+ F +A+  APSI+FIDE+DA+GTKR+++   G
Sbjct: 249 ETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEDHAPSIVFIDEIDAVGTKRYEATSGG 308

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR D LD AL+R GR+DRKI+ P+PD   +
Sbjct: 309 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTK 368

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            RI +IH+ KM + PDV  EE   S D+ + A +KA+C EAG+ ALR  R  +   D 
Sbjct: 369 RRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQLDL 426

gb|AAH54287.1| Pros26.4-prov protein [Xenopus laevis]
(440 aa)

Score: 303 bits (776), Expect: 7.406e-81
Length: 310, Idn/Pos/Gap = 159/216/0 (51%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G  L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGLELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 KRIFQIHTSRMTLATDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

gb|AAH49471.1| Proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Danio rerio]
ref|NP_956327.1| proteasome (prosome, macropain) 26S subunit, ATPase, 1 [Danio rerio]
(440 aa)

Score: 303 bits (776), Expect: 8.97279e-81
Length: 310, Idn/Pos/Gap = 160/217/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + ++  L ++ D  V   +V++ P 
Sbjct: 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 182 ETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M V  DV+ ++L  + DD + A +KA+C EAG+ ALR  R  V +EDF  
Sbjct: 362 RRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421

Query: 476 GIAAVQAKKK 485
               V  KK+
Sbjct: 422 SKENVLYKKQ 431

ref|NP_614161.1| ATP-dependent 26S proteasome regulatory subunit [Methanopyrus kandleri AV19]
gb|AAM02091.1| ATP-dependent 26S proteasome regulatory subunit [Methanopyrus kandleri AV19]
sp|Q8TX03|PSMR_METKA Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(436 aa)

Score: 301 bits (772), Expect: 2.54615e-80
Length: 311, Idn/Pos/Gap = 166/218/0 (53%/70%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK+ST       +   VD +EL PG  V +N+ S  +++ LP E D+RV A EVDE P
Sbjct: 115 VIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESP 174

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              + DIGGLD+QI E+ E V  P+    LFE+VG++PPKGVL+YGPPGTGKTLLA+A A
Sbjct: 175 DVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVA 234

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
               ATF++LA   LVQ FIG+GARLVR+ F LA++KAPSIIFIDE+DAIG +R     S
Sbjct: 235 NHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATS 294

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GDRE QRT+ +LL ++DGFD  DD++V+AATNR DILD AL+R GR DR I+ P PDE  
Sbjct: 295 GDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEG 354

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I +IH+R MN+  DV  ++LA+ T+  + A +KA+C EAGM A+R DR +V  +DF+
Sbjct: 355 RYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFL 414

Query: 475 DGIAAVQAKKK 485
             +  V  KK+
Sbjct: 415 KAVDRVMGKKE 425

emb|CAE64528.1| Hypothetical protein CBG09267 [Caenorhabditis briggsae]
(443 aa)

Score: 301 bits (771), Expect: 3.24316e-80
Length: 310, Idn/Pos/Gap = 155/218/0 (50%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V T+     ++ I   VD  +L PG  V +N  ++ ++  L ++ D  V   ++++ P 
Sbjct: 125 IVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +AD+GGLD+QI+E+ EAV LP+TH   +E +GI+PPKGV++YG PGTGKTLLA+A A 
Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG ++VR+ F +A++ APSI+FIDE+DA+GTKR+DS+  G
Sbjct: 245 QTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGG 304

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+VL ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTK 364

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ EE   + D+ + A +KA+C EAG+ ALR  R  V  EDF  
Sbjct: 365 RRIFQIHTSRMTLGDDVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQK 424

Query: 476 GIAAVQAKKK 485
               V  +KK
Sbjct: 425 SKENVLYRKK 434

emb|CAF31203.1| proteasome-activating nucleotidase (PAN) [Methanococcus maripaludis S2]
ref|NP_988767.1| proteasome-activating nucleotidase (PAN) [Methanococcus maripaludis S2]
sp|Q6LWR0|PSMR_METMP Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(407 aa)

Score: 300 bits (769), Expect: 5.48603e-80
Length: 310, Idn/Pos/Gap = 157/219/1 (50%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           VVK+ST     + +   VD  ++ PG  V +N+ +  I+E LP+E D R  A E++E+P 
Sbjct:  85 VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPD 144

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             F DIGGL+ QI ++ E V LP+ +  LFE+VGI PPKGVL+YGPPGTGKTLLA+A A 
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +T A+F+++ G+ LV+ FIG+GA+LVRD F LAK+K+P IIFIDE+DA+ +KR +S   G
Sbjct: 205 ETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGG 264

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT+++LL ++DGFD   DV+++AATNRPDILD A++R GR DR IE   PDE  R
Sbjct: 265 DREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGR 324

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             IL+IH+ KMN+   V   E+A+  ++   A LKAVC EAGM A+R +R+ +  +DF +
Sbjct: 325 LEILKIHTEKMNLK-GVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFRE 383

Query: 476 GIAAVQAKKK 485
            I+ +  KK+
Sbjct: 384 AISKITGKKE 393

gb|AAB65906.1| Proteasome regulatory particle, atpase-like protein 2 [Caenorhabditis elegans]
ref|NP_504558.1| proteasome Regulatory Particle, ATPase-like, S4 (49.7 kD) (rpt-2) [Caenorhabditis elegans]
pir||T31800 hypothetical protein F29G9.5 - Caenorhabditis elegans
sp|O16368|PRS4_CAEEL Probable 26S protease regulatory subunit 4
(443 aa)

Score: 300 bits (767), Expect: 8.90082e-80
Length: 310, Idn/Pos/Gap = 154/218/0 (49%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V T+     ++ I   VD  +L PG  V +N  ++ ++  L ++ D  V   ++++ P 
Sbjct: 125 IVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +AD+GGLD+QI+E+ EAV LP+TH   +E +GI+PPKGV++YG PGTGKTLLA+A A 
Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG ++VR+ F +A++ APSI+FIDE+DA+GTKR+DS+  G
Sbjct: 245 QTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGG 304

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+VL ATNR + LD AL+R GR+DRKIEFP PDE  +
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTK 364

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  +V+ EE   + D+ + A +KA+C EAG+ ALR  R  V  EDF  
Sbjct: 365 RRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQK 424

Query: 476 GIAAVQAKKK 485
               V  +KK
Sbjct: 425 SKENVLYRKK 434

gb|EAL72742.1| hypothetical protein DDB0202018 [Dictyostelium discoideum]
(439 aa)

Score: 298 bits (764), Expect: 1.74963e-79
Length: 298, Idn/Pos/Gap = 153/210/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++     ++ I   VD S+L  G  V +N  +  ++  +  E D  V   +V++ PT
Sbjct: 121 IVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPT 180

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E ++DIGGL+ Q++E+ EA+ LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 181 ESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVAN 240

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG +LVR+ F +A + APSI+FIDE+DA+GTKR+DS   G
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGG 300

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   +
Sbjct: 301 EREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTK 360

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +I  IH+ KMN+  DV+ EE   S DD + A +KA+C E+G+ ALR  R  V H DF
Sbjct: 361 RKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDF 418

emb|CAD27157.1| 26S PROTEASOME REGULATORY SUBUNIT 8 [Encephalitozoon cuniculi GB-M1]
ref|NP_597109.1| 26S PROTEASOME REGULATORY SUBUNIT 8 [Encephalitozoon cuniculi GB-M1]
(453 aa)

Score: 298 bits (764), Expect: 2.01626e-79
Length: 299, Idn/Pos/Gap = 153/209/0 (51%/69%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VKT+      + +   V+  EL+ G  V +  DSY +   LP + D  V    V++ P
Sbjct: 132 VLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVP 191

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 192 DSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVA 251

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+  F++++G+ LVQ +IG+G+RLVR+ F +A++ APSIIF+DE+D+IG+ R DS++ 
Sbjct: 252 HHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKG 311

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
            D E QRTMLELLNQLDGF+ +++++V+ ATNR DILD AL+R+GR+DRKIEFP P+E+A
Sbjct: 312 SDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESA 371

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           R  IL+IHSRKMN+   +  E +A      + A +KAVC EAGM ALR  R  V  EDF
Sbjct: 372 RLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDF 430

emb|CAG60399.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_447462.1| unnamed protein product [Candida glabrata]
(433 aa)

Score: 298 bits (763), Expect: 2.44282e-79
Length: 298, Idn/Pos/Gap = 154/209/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V + T    ++ I   VD   L PG  V ++  +  I+  L ++ D  V   ++D+ PT
Sbjct: 115 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKIDKSPT 174

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E ++DIGGL+ QI+E+ E+V LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 175 ESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 234

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RL R  F +A + APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 235 QTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAAENAPSIVFIDEIDAIGTKRYDSNSGG 294

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD + +
Sbjct: 295 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIESLDPALIRPGRIDRKILFENPDLSTK 354

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +IL IH+ KMN+  DV  E L  S DD + A ++A+C EAG+ ALR  R  V  EDF
Sbjct: 355 RKILGIHTSKMNLSSDVDLENLVTSKDDLSGADIQAMCTEAGLLALRERRMQVTAEDF 412

dbj|BAB78491.1| 26S proteasome regulatory particle triple-A ATPase subunit2b [Oryza sativa (japonica cultivar-group)]
(450 aa)

Score: 298 bits (763), Expect: 2.58974e-79
Length: 347, Idn/Pos/Gap = 165/224/3 (47%/64%/0%)

Query: 139 SETQTPGAADHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSEL 198
           SE +T       DDL       G+ +E      +   +V +S     ++ I   VD  +L
Sbjct:  98 SEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHA---IVSSSVGPEYYVGILSFVDKDQL 154

Query: 199 RPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLP 258
            PG  + ++     ++  L +E D  V   +V++ P E +ADIGGLD QI+E+ EAV LP
Sbjct: 155 EPGCAILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELP 214

Query: 259 MTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGA 318
           +TH  L+E +GI+PPKGV++YG PGTGKTLLA+A A  T ATFL++ G+ L+Q ++GDG 
Sbjct: 215 LTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 274

Query: 319 RLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDD 378
           +LVR+ F +A   +PSI+FIDE+DA+GTKR+D+   G+RE QRTMLELLNQLDGFD   D
Sbjct: 275 KLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD 334

Query: 379 VRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELA 438
           V+V+ ATNR + LD AL+R GR+DRKIEFP PD   R RI +IH+ KM +  DV+ EE  
Sbjct: 335 VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFV 394

Query: 439 RSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKK 485
            + D+F+ A +KA+C EAG+ ALR  R  V H DF      V  KKK
Sbjct: 395 MTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKEKVMFKKK 441

gb|EAL48447.1| 26S proteasome subunit P45 family protein [Entamoeba histolytica HM-1:IMSS]
(410 aa)

Score: 298 bits (762), Expect: 3.11155e-79
Length: 360, Idn/Pos/Gap = 167/226/5 (46%/62%/1%)

Query: 130 LINRSSGITSETQTPGAADHEDDLDDAEEDEGAAQESDANQQ----SPAVVVKTSTRQTV 185
           LI R      E   P     +D     EE  G+  E     +      A++   +T Q  
Sbjct:  43 LIQRDFIENQEQIKPKEELEKDSRQKVEELRGSPLEVSKLHEMIDDHHAIISSGNTMQYC 102

Query: 186 FLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLD 245
            +P+  +VD   L PG  V  +  +  I+  L  + D  V   +VD+ P E +AD+GGL+
Sbjct: 103 -VPVLSIVDRELLEPGVQVLTHNHNKAIVGVLQNDEDPHVSVMKVDKAPLESYADVGGLE 161

Query: 246 KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA 305
           KQI+E+ EAV LP++H  L+E +GIKPPKGV++YGPPGTGKTLLA+A A +T ATFL++ 
Sbjct: 162 KQIQEIKEAVELPLSHPELYEEIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRIV 221

Query: 306 GTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLE 365
           G+ L+Q ++GDG +LVR+ F  AK  APSI+FIDE+DA+GTKR+D+   G++E QRTMLE
Sbjct: 222 GSELIQKYLGDGPKLVRELFQAAKDSAPSIVFIDEIDAVGTKRYDAHSGGEKEIQRTMLE 281

Query: 366 LLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRK 425
           LLNQLDGFD   +V+V+ ATNR + LD+AL+R GR+DRKIEFP PD   + +I  IH+ K
Sbjct: 282 LLNQLDGFDTRGEVKVIIATNRIESLDSALIRPGRIDRKIEFPLPDIKTKRKIFEIHTSK 341

Query: 426 MNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKK 485
           M +   V  EE   S DD + A +KA+C EAG+ ALR  R  V  EDF      V  +KK
Sbjct: 342 MTLEEGVDMEEFVMSKDDLSGADIKAICTEAGLLALRERRMKVNQEDFKKAKEKVMYRKK 401

emb|CAA98563.1| RPT2 [Saccharomyces cerevisiae]
emb|CAA88352.1| homolog to S4 subunit of human 26S proteasome (X81070) [Saccharomyces cerevisiae]
emb|CAA56957.1| YTA5 [Saccharomyces cerevisiae]
sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog (TAT-binding homolog 5)
ref|NP_010277.1| One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle [Saccharomyces cerevisiae]
(437 aa)

Score: 298 bits (762), Expect: 3.19042e-79
Length: 298, Idn/Pos/Gap = 153/210/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V + T    ++ I   VD   L PG  V ++  +  I+  L ++ D  V   ++D+ PT
Sbjct: 119 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPT 178

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E ++DIGGL+ QI+E+ E+V LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 179 ESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RL R  F +A + APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 239 QTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGG 298

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD + +
Sbjct: 299 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTK 358

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +IL IH+ KMN+  DV+ E L  + DD + A ++A+C EAG+ ALR  R  V  EDF
Sbjct: 359 KKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDF 416

gb|AAM48537.1| Hypothetical protein F56F11.4b [Caenorhabditis elegans]
ref|NP_741098.1| 26s protease regulatory (48.0 kD) (3D953) [Caenorhabditis elegans]
(432 aa)

Score: 298 bits (762), Expect: 3.70743e-79
Length: 317, Idn/Pos/Gap = 159/214/3 (50%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   VD+S L  G  V +  D+Y I E LP + D  V    V++ P
Sbjct: 111 VLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVP 170

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD QI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 171 DSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 230

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +  R 
Sbjct: 231 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRG 290

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP PDE A
Sbjct: 291 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKA 350

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           RA+IL+IHSRKMN+   +  +++A      + A +K+VC EAGM ALR  R  V  EDF 
Sbjct: 351 RAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 410

Query: 475 DGIAAVQAK---KKMSL 488
             +  V  K   K MS+
Sbjct: 411 MAVGKVMQKDSEKNMSI 427

pir||T33633 hypothetical protein F56F11.4 - Caenorhabditis elegans
(443 aa)

Score: 297 bits (760), Expect: 4.96479e-79
Length: 317, Idn/Pos/Gap = 159/214/3 (50%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   VD+S L  G  V +  D+Y I E LP + D  V    V++ P
Sbjct: 122 VLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVP 181

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD QI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 182 DSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 241

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +  R 
Sbjct: 242 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRG 301

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP PDE A
Sbjct: 302 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKA 361

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           RA+IL+IHSRKMN+   +  +++A      + A +K+VC EAGM ALR  R  V  EDF 
Sbjct: 362 RAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 421

Query: 475 DGIAAVQAK---KKMSL 488
             +  V  K   K MS+
Sbjct: 422 MAVGKVMQKDSEKNMSI 438

sp|P46466|PRS4_ORYSA 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2)
pir||T03776 tat binding protein homolog - rice
dbj|BAA04615.1| rice homologue of Tat binding protein [Oryza sativa (japonica cultivar-group)]
(448 aa)

Score: 297 bits (760), Expect: 5.35197e-79
Length: 310, Idn/Pos/Gap = 157/213/0 (50%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +L PG  + ++     ++  L +E D  V   +V++ P 
Sbjct: 130 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 189

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ EAV LP+TH  L+E +GI+PPKGV++YG PGTGKTLLA+A A 
Sbjct: 190 ESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVAN 249

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A + +PSI+FIDE+DA+GTKR+D+   G
Sbjct: 250 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGG 309

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 310 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 369

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ KM +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 370 RRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKK 429

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 430 AKEKVMFKKK 439

emb|CAD19436.1| probable proteasome regulatory ATPase subunit 2 [Leishmania major]
(438 aa)

Score: 297 bits (760), Expect: 5.81768e-79
Length: 361, Idn/Pos/Gap = 163/233/6 (45%/64%/1%)

Query: 131 INRSSGITSETQTPGAADHEDDLDDAEEDEGAAQE----SDANQQSPAVVVKTSTRQTVF 186
           IN      S  +      +E +L   E+  G   E     +A   S A+V  + T    +
Sbjct:  73 INAQRDAQSNLEEGAMGHYEAELKRVEDIRGTPLEVATLEEAVDDSHAIVSISGTE--YY 130

Query: 187 LPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDK 246
           +P+   VD  +L  G  V ++   + I+  L ++ D  V   +VD+ P + +ADIGGL++
Sbjct: 131 VPLMSFVDKEQLELGCSVLLHDRQHSIVGVLKDDVDPLVSVMKVDKAPEDTYADIGGLEQ 190

Query: 247 QIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG 306
           QI+E+ EAV  P++H  L++ +GIKPPKGV++YG PGTGKTLLA+A A +T ATFL++ G
Sbjct: 191 QIQEIKEAVEFPLSHPELYDEIGIKPPKGVILYGVPGTGKTLLAKAVANRTSATFLRVVG 250

Query: 307 TSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLEL 366
           + L+Q + G+G +LVR+ F +A++ +P+I+FIDE+DAIGTKR+D+D SG +E QRTMLEL
Sbjct: 251 SELIQKYSGEGPKLVRELFRVAEEHSPAIVFIDEIDAIGTKRYDTDSSGTKEVQRTMLEL 310

Query: 367 LNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKM 426
           L QLDGFD ++DV+V+ ATNR D LD AL+R GR+DRKIEFP PDE  + RI  IH+ +M
Sbjct: 311 LTQLDGFDSSNDVKVIMATNRIDTLDPALIRPGRIDRKIEFPFPDEKTKRRIFEIHTSRM 370

Query: 427 NVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           ++  DV   E   + D+ + A +KA+C EAG+ ALR  R  V   DFI G   VQ +K  
Sbjct: 371 SLAEDVDISEFIHAKDEMSGADVKAICTEAGLLALRERRMKVCQADFIKGKENVQYRKDK 430

Query: 487 S 487
           S
Sbjct: 431 S 431

ref|NP_910447.1| 26S proteasome regulatory subunit 4 homolog [Oryza sativa (japonica cultivar-group)]
ref|XP_507415.1| PREDICTED P0034A04.112 gene product [Oryza sativa (japonica cultivar-group)]
ref|XP_506590.1| PREDICTED P0034A04.112 gene product [Oryza sativa (japonica cultivar-group)]
dbj|BAC75555.1| 26S proteasome regulatory subunit 4 homolog [Oryza sativa (japonica cultivar-group)]
(448 aa)

Score: 297 bits (760), Expect: 6.11634e-79
Length: 310, Idn/Pos/Gap = 157/213/0 (50%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +L PG  + ++     ++  L +E D  V   +V++ P 
Sbjct: 130 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 189

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ EAV LP+TH  L+E +GI+PPKGV++YG PGTGKTLLA+A A 
Sbjct: 190 ESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVAN 249

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A + +PSI+FIDE+DA+GTKR+D+   G
Sbjct: 250 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGG 309

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 310 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 369

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ KM +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 370 RRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKK 429

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 430 AKEKVMFKKK 439

emb|CAC14432.1| 26S proteasome subunit 4-like protein [Brassica napus]
(443 aa)

Score: 297 bits (760), Expect: 6.27137e-79
Length: 310, Idn/Pos/Gap = 157/213/0 (50%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +L PG  + ++     ++  L +E D  V   +V++ P 
Sbjct: 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 185 ESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A   +PSI+FIDE+DA+GTKR+D++  G
Sbjct: 245 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGG 304

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ KM +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 365 RRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKK 424

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 425 AKEKVMFKKK 434

gb|AAS52674.1| AEL011Wp [Ashbya gossypii ATCC 10895]
ref|NP_984850.1| AEL011Wp [Eremothecium gossypii]
(437 aa)

Score: 296 bits (759), Expect: 7.04845e-79
Length: 298, Idn/Pos/Gap = 156/208/0 (52%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V + T    ++ I   VD   L PG  V ++  +  I+  L ++ D  V   ++D+ PT
Sbjct: 119 IVTSPTTPDFYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKIDKSPT 178

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E + DIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 179 ESYNDIGGLEAQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RL R  F +A + APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 239 QTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAAENAPSIVFIDEIDAIGTKRYDSNSGG 298

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD + +
Sbjct: 299 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIESLDPALIRPGRIDRKILFENPDVSTK 358

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +IL IH+ KMN+  DV  E L  S DD + A +KA+C EAG+ ALR  R  V  EDF
Sbjct: 359 RKILGIHTSKMNLSADVDLETLVTSKDDLSGADIKAMCTEAGLLALRERRMQVTVEDF 416

emb|CAB79662.1| 26S proteasome subunit 4-like protein [Arabidopsis thaliana]
emb|CAB43918.1| 26S proteasome subunit 4-like protein [Arabidopsis thaliana]
gb|AAK59480.1| putative 26S proteasome subunit 4 [Arabidopsis thaliana]
ref|NP_194633.1| 26S proteasome AAA-ATPase subunit (RPT2a) [Arabidopsis thaliana]
dbj|BAD18016.1| 26S proteasome subunit AtRPT2a [Arabidopsis thaliana]
pir||T08959 proteinase homolog F19B15.70 - Arabidopsis thaliana
(443 aa)

Score: 296 bits (758), Expect: 8.9034e-79
Length: 310, Idn/Pos/Gap = 157/212/0 (50%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +L PG  + ++     ++  L +E D  V   +V++ P 
Sbjct: 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 185 ESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A   +PSI+FIDE+DA+GTKR+D+   G
Sbjct: 245 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGG 304

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ KM +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 365 RRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKK 424

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 425 AKEKVMFKKK 434

gb|AAL07184.1| putative 26S proteasome subunit 4 [Arabidopsis thaliana]
gb|AAK59577.1| putative 26S proteasome subunit 4 [Arabidopsis thaliana]
gb|AAD24384.1| 26S proteasome subunit 4 [Arabidopsis thaliana]
ref|NP_179604.1| 26S protease regulatory complex subunit 4, putative [Arabidopsis thaliana]
pir||E84585 26S proteasome subunit 4 [imported] - Arabidopsis thaliana
(443 aa)

Score: 296 bits (758), Expect: 9.4389e-79
Length: 310, Idn/Pos/Gap = 157/213/0 (50%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +L PG  + ++     ++  L +E D  V   +V++ P 
Sbjct: 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 185 ESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A   +PSI+FIDE+DA+GTKR+D++  G
Sbjct: 245 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGG 304

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ KM +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 365 RRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKK 424

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 425 AKEKVMFKKK 434

gb|AAF22522.1| 26S proteasome AAA-ATPase subunit RPT2a [Arabidopsis thaliana]
(443 aa)

Score: 296 bits (758), Expect: 1.02602e-78
Length: 310, Idn/Pos/Gap = 157/212/0 (50%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +L PG  + ++     ++  L +E D  V   +V++ P 
Sbjct: 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 185 ESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A   +PSI+FIDE+DA+GTKR+D+   G
Sbjct: 245 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGG 304

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ KM +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 365 RRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKK 424

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 425 AKEKVMFKKK 434

gb|AAP80624.1| tat binding protein [Triticum aestivum]
(187 aa)

Score: 296 bits (758), Expect: 1.05203e-78
Length: 184, Idn/Pos/Gap = 146/168/0 (79%/91%/0%)

Query: 251 VIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLV 310
           ++EA+VLPMTHK  F+++GI+PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAG  LV
Sbjct:   4 LVEAIVLPMTHKEQFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV  63

Query: 311 QMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQL 370
           QMFIGDGA+LVRDAF LAK+KAP IIFIDE+DAIGTKRFDS+ SGDRE QRTMLELLNQL
Sbjct:  64 QMFIGDGAKLVRDAFELAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQL 123

Query: 371 DGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHP 430
           DGF  ++ ++V+AATNR DILD AL+RSGRLDRKIEFPHP E ARARIL+IHSRKMNVHP
Sbjct: 124 DGFSSDERIKVIAATNRADILDPALLRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHP 183

Query: 431 DVSY 434
           DV++
Sbjct: 184 DVNF 187

gb|AAA97498.1| ATPase
(437 aa)

Score: 296 bits (758), Expect: 1.0787e-78
Length: 298, Idn/Pos/Gap = 152/209/0 (51%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V + T    ++ I   VD   L PG  V ++  +  I+  L ++ D  V   ++D+ PT
Sbjct: 119 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPT 178

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E ++DIGGL+ QI+E+ E+V LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 179 ESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RL R  F +A + APSI+FIDE+DAIGTKR+DS+  G
Sbjct: 239 QTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGG 298

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DR I F +PD + +
Sbjct: 299 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRNILFENPDLSTK 358

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +IL IH+ KMN+  DV+ E L  + DD + A ++A+C EAG+ ALR  R  V  EDF
Sbjct: 359 KKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDF 416

gb|EAK87628.1| 26S proteasome regulatory subunit S4 like AAA ATpase [Cryptosporidium parvum]
gb|EAL35425.1| 26S proteasome AAA-ATPase subunit RPT2a [Cryptosporidium hominis]
(445 aa)

Score: 296 bits (757), Expect: 1.14358e-78
Length: 324, Idn/Pos/Gap = 157/221/5 (48%/68%/1%)

Query: 151 DDLDDAEEDEGAAQES-DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           DDL  +  + G  +E  D N      +V +S     ++ I   VD ++L PG  V ++  
Sbjct: 105 DDLRGSPMNIGTLEEIIDENH----AIVSSSVGSEYYVNILSFVDKNQLEPGSSVLLHNK 160

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
            Y ++  + +E D  V   +VD+ P E +ADIGGL++QI+E+ EAV +P+TH  L++ +G
Sbjct: 161 VYSVVGIMNDEVDPLVSVMKVDKAPLESYADIGGLEQQIQEIKEAVEIPLTHPELYDDIG 220

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
           IKPPKGV++YGPPGTGKTLLA+A A +T ATFL++ G+ L+Q ++GDG +LVR+ F +A+
Sbjct: 221 IKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 280

Query: 330 KKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
           + APSI+FIDE+DA+GTKR DS   G+R+ QRTMLELLNQLDGF+   DV+V+ ATN+ +
Sbjct: 281 ENAPSIVFIDEIDAVGTKRHDSQSGGERDIQRTMLELLNQLDGFEARGDVKVIMATNKIE 340

Query: 390 ILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAML 449
            LD AL+R GR+DRKIE P+PD   + RI +IH+ KM +  DV  EE   + DD + A +
Sbjct: 341 SLDPALIRPGRIDRKIELPNPDCKTKRRIFQIHTSKMTLSDDVDLEEFIMAKDDISGADI 400

Query: 450 KAVCVEAGMAALRADRKVVIHEDF 473
           KA+C EAG+ ALR  R  V  ED 
Sbjct: 401 KAICTEAGLLALRERRMRVTQEDL 424

gb|AAK50114.1| At2g20140/T2G17.6 [Arabidopsis thaliana]
(443 aa)

Score: 296 bits (757), Expect: 1.18239e-78
Length: 310, Idn/Pos/Gap = 157/213/0 (50%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +L PG  + ++     ++  L +E D  V   +V++ P 
Sbjct: 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVVKVEKAPL 184

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 185 ESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A   +PSI+FIDE+DA+GTKR+D++  G
Sbjct: 245 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGG 304

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ KM +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 365 RRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKK 424

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 425 AKEKVMFKKK 434

gb|AAK21407.2| Hypothetical protein F56F11.4a [Caenorhabditis elegans]
ref|NP_741099.1| 26s protease regulatory (45.6 kD) (3D953) [Caenorhabditis elegans]
(411 aa)

Score: 295 bits (756), Expect: 1.69269e-78
Length: 317, Idn/Pos/Gap = 159/214/3 (50%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   VD+S L  G  V +  D+Y I E LP + D  V    V++ P
Sbjct:  90 VLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVP 149

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD QI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 150 DSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 209

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +  R 
Sbjct: 210 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRG 269

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP PDE A
Sbjct: 270 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKA 329

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           RA+IL+IHSRKMN+   +  +++A      + A +K+VC EAGM ALR  R  V  EDF 
Sbjct: 330 RAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 389

Query: 475 DGIAAVQAK---KKMSL 488
             +  V  K   K MS+
Sbjct: 390 MAVGKVMQKDSEKNMSI 406

dbj|BAD32833.1| putative 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza sativa (japonica cultivar-group)]
dbj|BAD32954.1| putative 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza sativa (japonica cultivar-group)]
(423 aa)

Score: 295 bits (755), Expect: 1.88662e-78
Length: 318, Idn/Pos/Gap = 158/217/4 (49%/68%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D+++L P   V +  DSY++   LP + D  V   +V++ P
Sbjct: 101 VLVKVHPEGKYVVDVDKSIDITKLSPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVP 160

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 161 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 220

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR- 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R  S   
Sbjct: 221 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMQSGSG 280

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
            GD E QRTMLELLNQLDGF+ ++ ++VL ATNR DILD AL+R GR+DRKIEFP+P+E 
Sbjct: 281 GGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRMDILDQALLRPGRIDRKIEFPNPNED 340

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +R  IL+IHSRKMN+   +  +++A   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 341 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVNQEDF 400

Query: 474 IDGIAAVQAK---KKMSL 488
           +  +A V  K   K MSL
Sbjct: 401 LMAVAKVMKKDTEKNMSL 418

emb|CAE72996.1| Hypothetical protein CBG20343 [Caenorhabditis briggsae]
emb|CAE72994.1| Hypothetical protein CBG20339 [Caenorhabditis briggsae]
(415 aa)

Score: 294 bits (753), Expect: 3.52742e-78
Length: 299, Idn/Pos/Gap = 155/210/3 (51%/70%/1%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           VD+S++  G  V +  DSY+I + LP + D  V    V++ P   +  +GGLDKQI+E+ 
Sbjct: 112 VDMSQMTAGTRVAMKADSYMIHKVLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIK 171

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A  T+ TF++++G+ LVQ 
Sbjct: 172 EVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 231

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    GD E QRTMLELLNQLDG
Sbjct: 232 FIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDG 291

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           F+   +++V+ ATNR DILD+AL+R GR+DRKIEFP PDE ARA+IL+IHSRKMN+   +
Sbjct: 292 FEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGI 351

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAK---KKMSL 488
             +++A      + A +K+VC EAGM ALR  R  V  EDF   +  V  K   K MS+
Sbjct: 352 RMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSDKNMSV 410

sp|Q975U2|PSMR_SULTO Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(392 aa)

Score: 294 bits (753), Expect: 3.83437e-78
Length: 303, Idn/Pos/Gap = 148/211/0 (48%/69%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+V++S+   + + +   +D+ +L+PG LV + +    I+E LPE  DA VK+FEV E+P
Sbjct:  70 VIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKP 129

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              ++DIGGL++QI E+ E + LP+ +  LF+ +GI PPKGVL+YGPPGTGKTLLA+A A
Sbjct: 130 NVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVA 189

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            ++ ATF+++  +   Q F+G+GAR+VR+ F LA++KAPSI+FIDE+DAIG KR D   S
Sbjct: 190 TESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTS 249

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+RE QRT+++LL ++DGF   D+V+++AATNR DILD AL+R GR DR IE P P+   
Sbjct: 250 GEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEG 309

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I RI+ +KM    ++ Y+ LA  T+ F+ A +K VC EAG  A+R  RK V   D I
Sbjct: 310 RKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLI 369

Query: 475 DGI 477
             I
Sbjct: 370 TAI 372

gb|AAM65126.1| 26S proteasome subunit 4 [Arabidopsis thaliana]
(443 aa)

Score: 294 bits (753), Expect: 4.06499e-78
Length: 310, Idn/Pos/Gap = 157/212/0 (50%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +L PG  + ++     ++  L +E D  V   +V++ P 
Sbjct: 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 185 ESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A   +PSI FIDE+DA+GTKR+D++  G
Sbjct: 245 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIGFIDEIDAVGTKRYDANSGG 304

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 305 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 364

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ KM +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 365 RRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKK 424

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 425 AKEKVMFKKK 434

ref|XP_507461.1| PREDICTED P0544H11.38 gene product [Oryza sativa (japonica cultivar-group)]
ref|XP_464561.1| 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza sativa (japonica cultivar-group)]
ref|XP_506757.1| PREDICTED P0544H11.38 gene product [Oryza sativa (japonica cultivar-group)]
dbj|BAD38437.1| 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza sativa (japonica cultivar-group)]
dbj|BAD16017.1| 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza sativa (japonica cultivar-group)]
dbj|BAB19880.1| 26S proteasome ATPase subunit Rpt6 [Oryza sativa]
dbj|BAB17626.1| 26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza sativa (japonica cultivar-group)]
(424 aa)

Score: 294 bits (752), Expect: 4.92496e-78
Length: 318, Idn/Pos/Gap = 158/218/4 (49%/68%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D++++ P   V +  DSY++   LP + D  V   +V++ P
Sbjct: 102 VLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVP 161

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 162 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 221

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR- 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 222 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGTG 281

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GD E QRTMLELLNQLDGF+ ++ ++VL ATNR DILD AL+R GR+DRKIEFP+P+E 
Sbjct: 282 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNED 341

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +R  IL+IHSRKMN+   +  +++A   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 342 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 401

Query: 474 IDGIAAVQAK---KKMSL 488
              +A V  K   K MSL
Sbjct: 402 EMAVAKVMKKDTEKNMSL 419

gb|AAW27345.1| unknown [Schistosoma japonicum]
(430 aa)

Score: 294 bits (752), Expect: 5.35352e-78
Length: 309, Idn/Pos/Gap = 157/211/0 (50%/68%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +++S++ P   V +  DSY++ + LP + D  V    V++ P
Sbjct: 109 VLVKVQPEGKYVVDIDKNIEMSQISPNCRVALRSDSYILHKILPSKVDPLVSLMMVEKVP 168

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 169 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 228

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+  VQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 229 HHTECTFIRVSGSRAVQKFIGEGARMVRELFVMAREHAPSIIFMDEVDSIGSTRLESGTG 288

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 289 GDSEVQRTMLELLNQLDGFEPKQNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPNEEA 348

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  ILRIHSRKMN+  D+   +LA S    + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 349 RLDILRIHSRKMNLTRDIDLRKLAESMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 408

Query: 475 DGIAAVQAK 483
             +A V  K
Sbjct: 409 LAVAKVMQK 417

gb|AAF22526.1| 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana]
(405 aa)

Score: 293 bits (751), Expect: 6.48609e-78
Length: 318, Idn/Pos/Gap = 158/218/4 (49%/68%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D++++ P   V +  DSY++   LP + D  V   +V++ P
Sbjct:  83 VLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVP 142

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 143 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 202

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR- 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 203 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 262

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GD E QRTMLELLNQLDGF+ ++ ++VL ATNR DILD AL+R GR+DRKIEFP+P+E 
Sbjct: 263 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEE 322

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +R  IL+IHSRKMN+   +  +++A   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 323 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 382

Query: 474 IDGIAAVQAK---KKMSL 488
              +A V  K   K MSL
Sbjct: 383 EMAVAKVMKKDTEKNMSL 400

gb|EAL20636.1| hypothetical protein CNBE3010 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW43542.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_570849.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
(438 aa)

Score: 293 bits (751), Expect: 6.76241e-78
Length: 345, Idn/Pos/Gap = 157/228/3 (45%/66%/0%)

Query: 129 DLINRSSGITSETQTPGAADHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLP 188
           + ++  +  + E +T       D+L  +    G  +E   +  +   +V +      ++ 
Sbjct:  76 EFVSNQASQSGEDRTAADRTRVDELRGSPMGVGTLEEIIDDDHA---IVSSGGGSEYYVG 132

Query: 189 IPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQI 248
           I   VD   L PG  V ++  ++ ++  L ++ D  V   ++D+ PTE +ADIGGL+ QI
Sbjct: 133 IMSFVDKDLLEPGCSVLLHHKTHAVVGVLADDTDPMVSVMKLDKAPTESYADIGGLESQI 192

Query: 249 EEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTS 308
           +E+ E+V LP+TH  L+E +GI+PPKGV++YG PGTGKTLLA+A A QT ATFL++ G+ 
Sbjct: 193 QEIKESVELPLTHPELYEEMGIRPPKGVILYGVPGTGKTLLAKAVANQTSATFLRIVGSE 252

Query: 309 LVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLN 368
           L+Q ++GDG +LVR+ F +A++ APSI+FIDE+DAIGTKR+DS  SG+RE QRTMLELLN
Sbjct: 253 LIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAIGTKRYDSTSSGEREIQRTMLELLN 312

Query: 369 QLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNV 428
           QLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKIEFP PD   +  I ++H+ +M++
Sbjct: 313 QLDGFDTRGDVKVIMATNKIENLDPALIRPGRIDRKIEFPLPDTKTKRHIFKLHTSRMSL 372

Query: 429 HPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
             DV  EEL  + D+ + A +KAVC EAG+ ALR  R  V   DF
Sbjct: 373 ADDVDIEELVMTKDELSGADIKAVCTEAGLLALRERRMRVTRTDF 417

gb|AAM65046.1| 26S proteasome AAA-ATPase subunit RPT6a-like protein [Arabidopsis thaliana]
gb|AAL85134.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana]
gb|AAK64142.1| putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana]
ref|NP_197500.1| 26S proteasome AAA-ATPase subunit, putative [Arabidopsis thaliana]
(419 aa)

Score: 293 bits (750), Expect: 8.26169e-78
Length: 318, Idn/Pos/Gap = 159/218/4 (50%/68%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D+++L P   V +  DSY++   LP + D  V   +V++ P
Sbjct:  97 VLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVP 156

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR- 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GD E QRTMLELLNQLDGF+ ++ ++VL ATNR DILD AL+R GR+DRKIEFP+P+E 
Sbjct: 277 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEE 336

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +R  IL+IHSRKMN+   +  +++A   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 337 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 396

Query: 474 IDGIAAVQAK---KKMSL 488
              +A V  K   K MSL
Sbjct: 397 EMAVAKVMKKDTEKNMSL 414

dbj|BAB78504.1| 26S proteasome regulatory particle triple-A ATPase subunit5b [Oryza sativa (japonica cultivar-group)]
(194 aa)

Score: 293 bits (750), Expect: 9.20823e-78
Length: 194, Idn/Pos/Gap = 155/169/0 (79%/87%/0%)

Query: 299 ATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRE 358
           ATFLKLAG  LVQMFIGDGA+LVRDAF LAK+KAP IIFIDE+DAIGTKRFDS+ SGDRE
Sbjct:   1 ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDRE  60

Query: 359 TQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARI 418
            QRTMLELLNQLDGF  ++ ++V+AATNR DILD ALMRSGRLDRKIEFPHP E ARARI
Sbjct:  61 VQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARI 120

Query: 419 LRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIA 478
           L+IHSRKMNV+PDV++EELARSTDDFN A LKAVCVEAGM ALR D   V HEDF +GI 
Sbjct: 121 LQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGII 180

Query: 479 AVQAKKKMSLNYYA 492
            VQAKKK SLNYYA
Sbjct: 181 QVQAKKKSSLNYYA 194

emb|CAG77715.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_504910.1| hypothetical protein [Yarrowia lipolytica]
(436 aa)

Score: 293 bits (749), Expect: 1.00934e-77
Length: 298, Idn/Pos/Gap = 151/209/0 (50%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +++    ++ I   VD   L PG  V ++  +  ++  L ++ D  V   ++D+ PT
Sbjct: 118 IVSSTSGPEYYVSIMSFVDKDLLEPGCSVLLHHKTVSVVGVLQDDADPMVSVMKLDKAPT 177

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ E+V LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 178 ESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 237

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RL R  F +A + APSI+FIDE+DAIGTKR++S   G
Sbjct: 238 QTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAAEHAPSIVFIDEIDAIGTKRYESTSGG 297

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD   +
Sbjct: 298 EREVQRTMLELLNQLDGFDDRGDVKVIMATNKIESLDPALIRPGRIDRKILFENPDSTTK 357

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +I+ IH+ KMN++ DV  EE   S D+ + A +KA+C EAG+ ALR  R  V  EDF
Sbjct: 358 RKIMGIHTSKMNLNDDVDLEEFVSSKDELSGADIKAMCTEAGLLALRERRMRVTAEDF 415

ref|XP_537597.1| PREDICTED: similar to proteasomal ATPase (SUG1) [Canis familiaris]
(423 aa)

Score: 293 bits (749), Expect: 1.1344e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct: 102 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 161

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 162 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 221

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 222 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 281

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 282 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 341

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 342 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 401

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 402 MAVAKVMQKDSEKNMSI 418

emb|CAG12637.1| unnamed protein product [Tetraodon nigroviridis]
(406 aa)

Score: 292 bits (748), Expect: 1.32928e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 385 MAVAKVMQKDSEKNMSI 401

gb|AAU82538.1| ATP-dependent 26S proteasome regulatory subunit [uncultured archaeon GZfos18C8]
(497 aa)

Score: 292 bits (748), Expect: 1.37439e-77
Length: 315, Idn/Pos/Gap = 153/209/0 (48%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V++ST     +     +   +L+PG  V +NK+   I+  +P   D  V+A EV E P 
Sbjct: 177 IVRSSTGPEFIVGSSQFIKDGDLKPGVQVALNKEHLSIVAVIPGSEDPLVQAMEVIESPD 236

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
            D+  IGGLDKQIE +  AV   +T   +FER+GI PPKGVL++GPPGTGKTLLA+A A 
Sbjct: 237 IDYNQIGGLDKQIEVLRGAVEFALTKPEIFERIGIDPPKGVLLFGPPGTGKTLLAKAVAT 296

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +T ATF+++ G+ LVQ +IG+GAR+VRD F +A+KKAP+IIFIDELD+IG  R D   SG
Sbjct: 297 RTDATFIRVVGSELVQKYIGEGARMVRDVFEMARKKAPAIIFIDELDSIGAVRLDDASSG 356

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
            RE QRT+++LL ++DGF+   DV +LAATNR DILD AL+R GR DR +  P PD  AR
Sbjct: 357 GREVQRTLMQLLAEMDGFNSRGDVCILAATNRWDILDPALIRPGRFDRLVYVPIPDREAR 416

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            +IL IH++KM +  DV ++ +   T+D N A L+A+ +EAGM A+R D   V  +DF D
Sbjct: 417 VKILLIHTKKMRLAGDVDFDRIVTLTEDANGATLRAIVMEAGMCAVREDADAVYQKDFED 476

Query: 476 GIAAVQAKKKMSLNY 490
            I  +   + M   Y
Sbjct: 477 AIKHIMNPEGMVDRY 491

pir||T43799 proteasome protein p45/SUG [imported] - rat (fragment)
dbj|BAA22935.1| proteasome p45/SUG [Rattus norvegicus]
(374 aa)

Score: 292 bits (748), Expect: 1.48158e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  53 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 112

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 113 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 172

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 173 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 232

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 233 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 292

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 293 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 352

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 353 MAVAKVMQKDSEKNMSI 369

emb|CAA57512.1| XSUG1 [Xenopus laevis]
sp|P46470|PRS8_XENLA 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)
(461 aa)

Score: 292 bits (748), Expect: 1.54469e-77
Length: 317, Idn/Pos/Gap = 155/211/4 (48%/66%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  80 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 139

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H   FE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 140 DSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVA 199

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 200 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGSG 258

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 259 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 318

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 319 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 378

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 379 MAVAKVMQKDSEKNMSI 395

gb|EAL44301.1| proteasome regulatory subunit, putative [Entamoeba histolytica HM-1:IMSS]
gb|EAL43703.1| 26S protease regulatory subunit 8, putative [Entamoeba histolytica HM-1:IMSS]
(398 aa)

Score: 292 bits (748), Expect: 1.57069e-77
Length: 311, Idn/Pos/Gap = 152/211/2 (48%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK++      + +   +D+  L+P   V +  D+Y I + LP + D  +    V++ P
Sbjct:  77 VLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLPNQVDPLISLMRVEKVP 136

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 137 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 196

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++GT LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 197 HHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIEGKSG 256

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLEL+NQLDGF+   +++VL ATNR DILD AL+R GR+DRKIEFP+P E A
Sbjct: 257 GDSEVQRTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEA 316

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHS+KMN+   +  +++A   D  + A +KA C EAGM ALR  R  V  EDF 
Sbjct: 317 RLDILKIHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGMFALRERRSHVTQEDF- 375

Query: 475 DGIAAVQAKKK 485
             +AA +  KK
Sbjct: 376 -ELAAAKVMKK 385

gb|AAP78936.1| At5g19990 [Arabidopsis thaliana]
gb|AAL38350.1| unknown protein [Arabidopsis thaliana]
ref|NP_568389.1| 26S proteasome AAA-ATPase subunit (RPT6a) [Arabidopsis thaliana]
dbj|BAB40755.1| AtSUG1 [Arabidopsis thaliana]
(419 aa)

Score: 292 bits (747), Expect: 1.6105e-77
Length: 318, Idn/Pos/Gap = 158/218/4 (49%/68%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D++++ P   V +  DSY++   LP + D  V   +V++ P
Sbjct:  97 VLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVP 156

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR- 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GD E QRTMLELLNQLDGF+ ++ ++VL ATNR DILD AL+R GR+DRKIEFP+P+E 
Sbjct: 277 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEE 336

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +R  IL+IHSRKMN+   +  +++A   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 337 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 396

Query: 474 IDGIAAVQAK---KKMSL 488
              +A V  K   K MSL
Sbjct: 397 EMAVAKVMKKDTEKNMSL 414

ref|NP_989358.1| hypothetical protein LOC394988 [Xenopus tropicalis]
gb|AAH64153.1| Hypothetical protein MGC75584 [Xenopus tropicalis]
(414 aa)

Score: 292 bits (747), Expect: 1.62399e-77
Length: 317, Idn/Pos/Gap = 157/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  93 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 152

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 153 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 272

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 273 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 332

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 333 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 392

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 393 MAVAKVMQKDSEKNMSI 409

gb|AAH04052.1| Psmc5 protein [Mus musculus]
(306 aa)

Score: 292 bits (747), Expect: 1.69318e-77
Length: 299, Idn/Pos/Gap = 153/206/3 (51%/68%/1%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D++++ P   V +  DSY + + LP + D  V    V++ P   +  IGGLDKQI+E+ 
Sbjct:   3 IDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIK  62

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A  T  TF++++G+ LVQ 
Sbjct:  63 EVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 122

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    GD E QRTMLELLNQLDG
Sbjct: 123 FIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 182

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           F+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E AR  IL+IHSRKMN+   +
Sbjct: 183 FEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI 242

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAK---KKMSL 488
           +  ++A      + A +K VC EAGM ALR  R  V  EDF   +A V  K   K MS+
Sbjct: 243 NLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSI 301

emb|CAA61864.1| put. 26S protease subunit [Sus scrofa]
(398 aa)

Score: 291 bits (746), Expect: 2.26741e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  77 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 136

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 137 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 196

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 197 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 256

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 257 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 316

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 317 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 376

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 377 MAVAKVMQKDSEKNMSI 393

emb|CAG98449.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_455741.1| unnamed protein product [Kluyveromyces lactis]
(434 aa)

Score: 291 bits (746), Expect: 2.28641e-77
Length: 298, Idn/Pos/Gap = 150/209/0 (50%/70%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V + T    ++ I   VD   L PG  V ++  +  ++  L ++ D  V   ++D+ PT
Sbjct: 116 IVTSPTTPDYYVSILSFVDKELLEPGCSVLLHHKTMSVVGVLQDDADPMVSVMKMDKSPT 175

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E+++DIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 176 ENYSDIGGLEAQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 235

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RL R  F +A + APSI+FIDE+DAIGTKR++S+  G
Sbjct: 236 QTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAAENAPSIVFIDEIDAIGTKRYESNSGG 295

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           ++E QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD   +
Sbjct: 296 EKEIQRTMLELLNQLDGFDDRGDVKVIMATNKIESLDPALIRPGRIDRKILFENPDITTK 355

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +I+ IH+ KMN+  DV  + L  S DD + A +KA+C EAG+ ALR  R  V  +DF
Sbjct: 356 RKIVGIHTSKMNLAEDVDLDNLVTSKDDLSGADIKAMCTEAGLLALRERRMQVTAQDF 413

gb|AAH78375.1| Zgc:92464 [Danio rerio]
ref|NP_001003740.1| hypothetical protein LOC445285 [Danio rerio]
(406 aa)

Score: 291 bits (746), Expect: 2.48536e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 385 MAVAKVMQKDSEKNMSI 401

gb|AAL73395.1| 26S proteasome regulatory subunit IV [Tortula ruralis]
(446 aa)

Score: 291 bits (745), Expect: 2.7471e-77
Length: 310, Idn/Pos/Gap = 154/211/0 (49%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S     ++ I   VD  +  PG  + ++     ++  L ++ D  V   +V++ P 
Sbjct: 128 IVSSSVGPEYYVNILSFVDKDQPGPGCAILMHNKVLSVVGLLQDDVDPMVSVMKVEKAPL 187

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ EAV LP+TH  L+E +GIKP KGV++YG PGTGKTLLA+A A 
Sbjct: 188 ESYADIGGLDPQIQEIKEAVELPLTHPELYEDIGIKPLKGVILYGEPGTGKTLLAKAVAN 247

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATFL++ G+ L+Q ++GDG +LVR+ F +A + +P+I+FIDE+DAIGTKR+D+   G
Sbjct: 248 STSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPTIVFIDEIDAIGTKRYDAHSGG 307

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATNR + LD AL+R GR+DRKIEFP PD   R
Sbjct: 308 EREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDTKTR 367

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            RI +IH+ +M +  DV+ EE   + D+F+ A +KA+C EAG+ ALR  R  V H DF  
Sbjct: 368 RRIFQIHTSRMTMADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKK 427

Query: 476 GIAAVQAKKK 485
               V  KKK
Sbjct: 428 AKEKVMYKKK 437

gb|AAV38531.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [synthetic construct]
(407 aa)

Score: 291 bits (745), Expect: 3.35615e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 385 MAVAKVMQKDSEKNMSI 401

gb|EAK98861.1| likely proteasome regulatory particle ATPase Rpt2p [Candida albicans SC5314]
gb|EAK98761.1| likely proteasome regulatory particle ATPase Rpt2p [Candida albicans SC5314]
(465 aa)

Score: 291 bits (744), Expect: 3.64819e-77
Length: 298, Idn/Pos/Gap = 149/207/0 (50%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++     ++ I   VD   L PG  V ++  +  ++  L ++ D  V   ++D+ PT
Sbjct: 123 IVSSTASSEYYVSIMSFVDKGLLEPGCSVLLHHKTVAVVGVLQDDADPMVSVMKLDKSPT 182

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ E+V LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 183 ESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RL R  F +A   APSI+FIDE+DAIGTKR++S   G
Sbjct: 243 QTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGG 302

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   D++V+ ATN+ + LD AL+R GR+DRKI F +PD   +
Sbjct: 303 EREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTK 362

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +IL IH+ KM++  DV+ +E+    DD + A +KA+C EAG+ ALR  R  V  EDF
Sbjct: 363 KKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAEDF 420

ref|NP_112411.1| for proteasomal ATPase (SUG1) [Rattus norvegicus]
ref|NP_999148.1| Tat-binding protein 10 [Sus scrofa]
ref|NP_032976.1| protease (prosome, macropain) 26S subunit, ATPase 5 [Mus musculus]
gb|AAH58462.1| For proteasomal ATPase (SUG1) [Rattus norvegicus]
gb|AAC19266.1| proteasome subunit SUG1 [Bos taurus]
gb|AAH02367.3| Proteasome 26S ATPase subunit 5 [Homo sapiens]
gb|AAH01932.1| Proteasome 26S ATPase subunit 5 [Homo sapiens]
sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 (Proteasome subunit p45) (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 (Proteasome subunit p45) (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor interacting protein 1) (TRIP1)
sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 (Proteasome subunit p45) (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor interacting protein 1) (TRIP1)
emb|CAA90961.1| mSUG1 protein [Mus musculus]
emb|CAA61863.1| 26S protease subunit [Sus scrofa]
sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 (Proteasome subunit p45) (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10)
dbj|BAA11938.1| proteasomal ATPase (rat SUG1) [Rattus norvegicus]
dbj|BAA22933.1| proteasome p45/SUG [Rattus norvegicus]
ref|NP_776866.1| proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Bos taurus]
ref|NP_002796.4| proteasome 26S ATPase subunit 5 [Homo sapiens]
(406 aa)

Score: 291 bits (744), Expect: 3.80361e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 385 MAVAKVMQKDSEKNMSI 401

dbj|BAA07919.1| 26S proteasome subunit p45 [Homo sapiens]
prf||2111282A 26S proteasome
(406 aa)

Score: 291 bits (744), Expect: 3.80361e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 385 MAVAKVMQKDSEKNMSI 401

pir||JN0611 probable transcription factor DdTBP2 - slime mold  (Dictyostelium discoideum)
gb|EAL62917.1| HIV1 TAT-binding protein [Dictyostelium discoideum]
sp|P34123|PRS6B_DICDI 26S protease regulatory subunit 6B homolog (TAT-binding protein homolog 2)
gb|AAA33253.1| HIV1 TAT-binding protein
(403 aa)

Score: 291 bits (744), Expect: 3.99887e-77
Length: 316, Idn/Pos/Gap = 144/215/0 (45%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V++++  T+ + I   +D   L+P   V + + S  +++ LP E D+ +     DE+P+
Sbjct:  87 IVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPS 146

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E ++DIGG D Q +E+ EAV LP+TH +L++++GI PP+GVL+YGPPGTGKT+LA+A A 
Sbjct: 147 ESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 206

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G RLVRD F LA++ +P+IIFIDE+DAI TKRFD+    
Sbjct: 207 HTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 266

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR ++ELLNQ+DGFD + +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 267 DREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQK 326

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I ++ + KMN+  +V  E+     D  + A ++++C EAGM A+R +R V++ +DF  
Sbjct: 327 RLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEK 386

Query: 476 GIAAVQAKKKMSLNYY 491
           G  A   K     N+Y
Sbjct: 387 GYKASIKKNTHEFNFY 402

ref|XP_425834.1| PREDICTED: similar to for proteasomal ATPase (SUG1) [Gallus gallus]
(411 aa)

Score: 291 bits (744), Expect: 4.34685e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  90 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 149

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 150 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 209

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 210 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 269

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 270 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 329

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 330 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 389

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 390 MAVAKVMQKDSEKNMSI 406

emb|CAE66491.1| Hypothetical protein CBG11771 [Caenorhabditis briggsae]
(417 aa)

Score: 290 bits (743), Expect: 5.49081e-77
Length: 416, Idn/Pos/Gap = 170/247/13 (40%/59%/3%)

Query:  81 APPSLTGPGTQSAPHAETALATQPNGSVS-----ETQGEARNQRLGSGARGGSDLINRSS 135
           APP++ G  +  +P   T   T+ +   +      T+ +   Q++   ++    L  + +
Sbjct:   2 APPAVPGTDSGRSPANNTQKLTEESSEETLRKYFRTKVDDAQQKVADKSQNVRRLQAQRN  61

Query: 136 GITSETQTPGAADHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDV 195
            + ++ +       +++L    E      E         V+VK        + +   +D+
Sbjct:  62 ELNTKVRM-----LKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKTIDI 116

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           + L  G  V +  DSY + + LP + D  V    V++ P   +  +GGLDKQI+E+ E +
Sbjct: 117 NSLNTGARVALRADSYALHKVLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVI 176

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A  T+ TF++++G+ LVQ FIG
Sbjct: 177 ELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIG 236

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    GD E QRTMLELLNQLDGF+ 
Sbjct: 237 EGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEA 296

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++V+ ATNR DILD AL+R GR+DRKIEFP PDE ARA IL+IHSRKMN+   ++  
Sbjct: 297 TKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMA 356

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAK---KKMSL 488
           ++A      + A +KAVC EAGM ALR  R  V  EDF   +  V  K   K MS+
Sbjct: 357 KIAEQIPGASGAEVKAVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKNMSI 412

gb|AAH72829.1| MGC80185 protein [Xenopus laevis]
(415 aa)

Score: 290 bits (743), Expect: 5.49081e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  94 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 153

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 154 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 213

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 214 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 273

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 274 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 333

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 334 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 393

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 394 MAVAKVMQKDSEKNMSI 410

gb|EAL32560.1| GA14216-PA [Drosophila pseudoobscura]
(413 aa)

Score: 290 bits (743), Expect: 5.86983e-77
Length: 316, Idn/Pos/Gap = 148/209/0 (46%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +   + DE+P 
Sbjct:  97 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPD 156

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +E+ EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 157 VSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 216

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 217 HTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 276

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 277 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 336

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +    + KMN+  DV  EE     D  + A + A+C EAGM A+R +R +V+ +DF  
Sbjct: 337 RLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEK 396

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K +    +Y
Sbjct: 397 GYKNNIKKDEQEHEFY 412

gb|AAH77223.1| Unknown (protein for MGC:79055) [Xenopus laevis]
(414 aa)

Score: 290 bits (742), Expect: 6.27501e-77
Length: 317, Idn/Pos/Gap = 156/212/3 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  93 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 152

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 153 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 272

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 273 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 332

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 333 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 392

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 393 MAVAKVMQKDSEKNMSI 409

ref|NP_572686.1| CG16916-PA [Drosophila melanogaster]
gb|AAF48001.1| CG16916-PA [Drosophila melanogaster]
gb|AAF08387.1| 26S proteasome regulatory complex subunit p48A [Drosophila melanogaster]
(413 aa)

Score: 290 bits (741), Expect: 8.47356e-77
Length: 316, Idn/Pos/Gap = 148/209/0 (46%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +   + DE+P 
Sbjct:  97 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPD 156

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +E+ EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 157 VSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 216

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 217 HTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 276

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 277 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 336

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +    + KMN+  DV  EE     D  + A + A+C EAGM A+R +R +V+ +DF  
Sbjct: 337 RLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEK 396

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K +    +Y
Sbjct: 397 GYKNNIKKDEQEHEFY 412

gb|AAB85233.1| ATP-dependent 26S protease regulatory subunit 4 [Methanothermobacter thermautotrophicus str. Delta H]
ref|NP_275871.1| ATP-dependent 26S protease regulatory subunit 4 [Methanothermobacter thermautotrophicus str. Delta H]
pir||C69197 ATP-dependent 26S proteinase regulatory subunit 4 - Methanobacterium thermoautotrophicum (strain Delta H)
sp|O26824|PSMR_METTH Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(410 aa)

Score: 290 bits (741), Expect: 8.68834e-77
Length: 311, Idn/Pos/Gap = 155/211/0 (49%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V VK++T     +     +D  +L PG  V +N+ ++ I++ LP E D  V   EV+E+P
Sbjct:  87 VAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKP 146

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGL++Q+ EV E V LP+    LFE++GI+PPKGVL+YGPPGTGKTLLA+A A
Sbjct: 147 DVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVA 206

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T ATF+K+  +  V+ +IG+GARLVR  F LAK+K+PSIIFIDE+DA+  KR  S  S
Sbjct: 207 HETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTS 266

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GDRE QRT+++LL +LDGF+   +V ++AATNRPDILD AL+R GR DR IE P P+E  
Sbjct: 267 GDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDG 326

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IH+  M +  +V  E LAR TD  + A LKA+C EAGM A+R +R  V   DF+
Sbjct: 327 RREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFM 386

Query: 475 DGIAAVQAKKK 485
           D +  +   +K
Sbjct: 387 DAVDKIMGVEK 397

gb|AAF27916.1| 26S proteasome regulatory subunit 8 [Pinus taeda]
(433 aa)

Score: 290 bits (741), Expect: 9.28808e-77
Length: 318, Idn/Pos/Gap = 157/217/4 (49%/68%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY++   LP + D  V   +V++ P
Sbjct: 111 VLVKVHPEGKYVVDVDKNIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVP 170

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 171 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 230

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR- 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 231 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGTG 290

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GD E QRTMLELLNQLDGF+ ++ ++VL ATNR DILD AL+R GR+DRKIEFP+P+E 
Sbjct: 291 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEE 350

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +R  IL+IHSRKMN+   +  +++A      + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 351 SRFDILKIHSRKMNLMRGIDLKKIAEKMSGASGAELKAVCTEAGMFALRERRVHVTQEDF 410

Query: 474 IDGIAAVQAK---KKMSL 488
              +A V  K   K MSL
Sbjct: 411 EMAVAKVMKKETEKNMSL 428

gb|EAA63870.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
ref|XP_406350.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
(460 aa)

Score: 289 bits (740), Expect: 1.03522e-76
Length: 356, Idn/Pos/Gap = 160/222/4 (44%/62%/1%)

Query: 118 QRLGSGARGGSDLINRSSGITSETQTPGAADHEDDLDDAEEDEGAAQESDANQQSPAVVV 177
           +RL       SD  NR     ++      AD    +DD           +        +V
Sbjct:  87 ERLRKAKASASDSANRGDVDITDRN----ADERSRVDDMRGSPMGVGNLEELIDDDHAIV 142

Query: 178 KTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTED 237
            ++T    ++ I   VD   L PG  + ++  +  ++  L EE D  V   ++D+ PTE 
Sbjct: 143 SSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVGVLTEESDPLVSVMKLDKAPTES 202

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           +ADIGGL+ QI+EV E+V LP+ H  L+E +GIKPPKGV++YG PGTGKTLLA+A A QT
Sbjct: 203 YADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 262

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
            ATFL++ G+ L+Q ++GDG RLVR  F +A + APSI+FIDE+DAIGTKR+DS   G+R
Sbjct: 263 SATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGGER 322

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD+  + +
Sbjct: 323 EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTKKK 382

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           I  +H+ KM++  DV  +E     DD + A ++A+C EAG+ ALR  R  V  +DF
Sbjct: 383 IFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERRMRVQMDDF 438

gb|AAG38539.1| putative 26S protease regulatory subunit 4 [Pneumocystis carinii f. sp. carinii]
(437 aa)

Score: 289 bits (740), Expect: 1.10668e-76
Length: 340, Idn/Pos/Gap = 157/219/19 (46%/64%/5%)

Query: 153 LDDAEEDEGAAQESDANQQS-----------------PAVVVKTSTRQTVFLPIPGLVDV 195
           LD  + D+   +E D   QS                    +V ++T    ++ I   V+ 
Sbjct:  77 LDSEKRDQKGEEEDDDKLQSLIGSPMGVGTLEEMIDDDHAIVSSATGPEYYVSIMSFVNK 136

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
             L PG  V ++  +  I+  L ++ D  V   ++D+ PTE +ADIGGL+ QI+E+ E V
Sbjct: 137 DLLEPGCSVLLHHKAVSIVGVLSDDIDPMVSVMKLDKAPTESYADIGGLESQIQEIKETV 196

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LP+TH  L+E +GI+PPKGV++YG PGTGKTLLA+A A QT ATFL++ G+ L+Q ++G
Sbjct: 197 ELPLTHPELYEEIGIRPPKGVILYGEPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLG 256

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           DG + VR+ F  A+  +PSI+FIDE+DAIGTKR+DS  SG+RE QRTMLELLNQLDGFD 
Sbjct: 257 DGPKFVRELFQTAQDNSPSIVFIDEIDAIGTKRYDSTSSGEREIQRTMLELLNQLDGFDD 316

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             DV+V+ ATNR + LD AL+R GR+DRKI F  PD+  + +I +IH+ KMN+  DV  E
Sbjct: 317 RGDVKVIMATNRINDLDPALIRPGRMDRKILFETPDQNTKRKIFQIHTSKMNLGDDVLIE 376

Query: 436 ELARSTDDFNAAMLK--AVCVEAGMAALRADRKVVIHEDF 473
           E   + D+ + A +K  A+C EAG+ ALR  R  V+ +DF
Sbjct: 377 EFITAKDEMSGADVKVIAICTEAGLLALRERRMRVVADDF 416

gb|EAK83732.1| hypothetical protein UM02562.1 [Ustilago maydis 521]
ref|XP_400177.1| hypothetical protein UM02562.1 [Ustilago maydis 521]
(438 aa)

Score: 289 bits (740), Expect: 1.13473e-76
Length: 323, Idn/Pos/Gap = 154/220/3 (47%/68%/0%)

Query: 151 DDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDS 210
           DDL  +    G  +E   ++ +   +V ++T    ++ I   VD   L PG  V ++  +
Sbjct:  98 DDLRGSPMAVGTLEEIIDDEHA---IVSSATGPEYYVSIMSFVDKDLLEPGCSVLLHHKA 154

Query: 211 YLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGI 270
             I+  L ++ D  V   ++D+ P+E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GI
Sbjct: 155 MAIVGVLSDDADPMVSVMKLDKAPSESYADIGGLETQIQEIKEAVELPLTHPELYEEMGI 214

Query: 271 KPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKK 330
           +PPKGV++YG PGTGKTLLA+A A QT ATFL++ G+ L+Q ++GDG +LVR+ F +A +
Sbjct: 215 RPPKGVILYGVPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADE 274

Query: 331 KAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDI 390
            APSI+FIDE+DA+GTKR+DS+  G+RE QRT+LELLNQLDGFD   DV+V+ ATNR + 
Sbjct: 275 HAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTLLELLNQLDGFDTRHDVKVIMATNRIES 334

Query: 391 LDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLK 450
           LD AL+R GR+DRKIEFP PD+  +  I ++H+ +MN+  DV  EE     DD + A +K
Sbjct: 335 LDPALIRPGRIDRKIEFPLPDQKTKMHIFKLHTSRMNLDSDVDLEEFVAMKDDLSGADIK 394

Query: 451 AVCVEAGMAALRADRKVVIHEDF 473
           ++  EAG+ ALR  R  V  +DF
Sbjct: 395 SLVTEAGLLALRERRMRVTKKDF 417

emb|CAH77685.1| 26S proteasome regulatory subunit 4, putative [Plasmodium chabaudi]
(293 aa)

Score: 289 bits (740), Expect: 1.20298e-76
Length: 270, Idn/Pos/Gap = 144/196/0 (53%/72%/0%)

Query: 204 VGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKH 263
           V +N  +  ++  L +E D  V   +V++ P E +ADIGGL+ QI+E+ EAV LP+TH  
Sbjct:   3 VLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPE  62

Query: 264 LFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRD 323
           L+E +GIKPPKGV++YGPPGTGKTLLA+A A +T ATFL++ G+ L+Q ++GDG +LVR+
Sbjct:  63 LYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVRE 122

Query: 324 AFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLA 383
            F +A+  APSI+FIDE+DA+GTKR+++   G+RE QRTMLELLNQLDGFD   DV+V+ 
Sbjct: 123 MFKVAEDHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 182

Query: 384 ATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDD 443
           ATNR D LD AL+R GR+DRKI+ P+PD   + RI +IH+ KM + PDV  EE   S D+
Sbjct: 183 ATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDE 242

Query: 444 FNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            + A +KA+C EAG+ ALR  R  +   D 
Sbjct: 243 LSGADIKAICTEAGLLALRERRMKITQLDL 272

dbj|BAA87070.2| TAT-binding protein homolog [Matricaria chamomilla]
(414 aa)

Score: 289 bits (740), Expect: 1.22322e-76
Length: 318, Idn/Pos/Gap = 156/216/4 (49%/67%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D++++ P   V +  DSY++   LP + D  V   +V++ P
Sbjct:  92 VLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVP 151

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 152 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 211

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR- 353
             T   F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 212 HHTDCAFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 271

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GD E QRTMLELLNQLDGF+ +  ++VL ATNR DILD AL+R GR+DR+IEFP+P+E 
Sbjct: 272 NGDSEVQRTMLELLNQLDGFESSTKIKVLMATNRIDILDPALLRPGRIDREIEFPNPNED 331

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +R  IL+IHSRKMN+   +  +++A   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 332 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 391

Query: 474 IDGIAAVQAK---KKMSL 488
              +A V  K   K MSL
Sbjct: 392 EMAVAKVMKKETEKNMSL 409

emb|CAG85953.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_457903.1| unnamed protein product [Debaryomyces hansenii]
(433 aa)

Score: 289 bits (740), Expect: 1.34081e-76
Length: 298, Idn/Pos/Gap = 151/207/0 (50%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++     ++ I   VD   L P   V ++  +  I+  L ++ D  V   ++D+ PT
Sbjct: 115 IVSSTAGSEYYVSIMSFVDKGLLEPSCSVLLHHKTVSIVGVLQDDADPMVSVMKLDKSPT 174

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 175 ESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 234

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RL R  F +A + APSI+FIDE+DAIG+KR++S   G
Sbjct: 235 QTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAGELAPSIVFIDEIDAIGSKRYESSSGG 294

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   D++V+ ATN+ + LD AL+R GR+DRKI F +PD   +
Sbjct: 295 EREVQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDSNTK 354

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            RIL IH+ KM++  DV  +EL  S D+ + A +KA+C EAG+ ALR  R  V  EDF
Sbjct: 355 KRILHIHTSKMSLADDVKLDELVTSKDELSGADIKAMCTEAGLLALRERRMQVKAEDF 412

ref|XP_326717.1| probable 26S ATP/ubiquitin-dependent proteinase chain S4 [MIPS] [Neurospora crassa]
gb|EAA32354.1| probable 26S ATP/ubiquitin-dependent proteinase chain S4 [MIPS] [Neurospora crassa]
pir||T48743 probable 26S ATP/ubiquitin-dependent proteinase chain S4 [imported] - Neurospora crassa
(471 aa)

Score: 289 bits (739), Expect: 1.45748e-76
Length: 298, Idn/Pos/Gap = 152/208/0 (51%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +++    ++ I   VD   L PG  V ++  S  I+  L ++ D  V   ++D+ PT
Sbjct: 153 IVSSTSGPEYYVSIMSFVDKDLLEPGASVLLHHKSVSIVGVLTDDTDPAVSVMKLDKAPT 212

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL++QI+EV E+V LP+ H  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 213 ESYADIGGLEQQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 272

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RLVR  F +A + APSI+FIDE+DAIGTKR+DS   G
Sbjct: 273 QTSATFLRIVGSELIQKYLGDGPRLVRQLFQVAAENAPSIVFIDEIDAIGTKRYDSTSGG 332

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD+  +
Sbjct: 333 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIESLDPALIRPGRIDRKILFENPDQNTK 392

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +I  +H+ KM+++ DV  EE     DD + A +KA+C EAG+ ALR  R  V   DF
Sbjct: 393 RKIFTLHTSKMSLNEDVDLEEFIAQKDDLSGADIKAICSEAGLMALRERRMRVQMADF 450

gb|AAL96757.1| Tcc1l8.3 [Trypanosoma cruzi]
(403 aa)

Score: 288 bits (738), Expect: 1.93556e-76
Length: 298, Idn/Pos/Gap = 141/207/0 (47%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V  ++    ++ I   +D   L+PG  VG++K S   ++ LP E D+ +   + +E+P+
Sbjct:  86 IVGGASSSNYYVRILSTLDKERLKPGASVGLHKGSNACVQLLPNETDSTIHLLQKEEKPS 145

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++D+GGLD Q +E+ EAV LP+TH  L++++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 146 VTYSDVGGLDMQKQEIREAVELPLTHASLYDQIGIDPPRGVLLYGPPGTGKTMLVKAVAH 205

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            TKA+F+ +AG+  VQ ++G+G R VRD F LA++ APSIIFIDE+D+I TKRFD+    
Sbjct: 206 HTKASFITVAGSEFVQKYLGEGPRKVRDLFRLARENAPSIIFIDEVDSIATKRFDAQTGA 265

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR ++ELL Q+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 266 DREVQRVLVELLTQMDGFDQTTNVKVIMATNRWDTLDPALLRPGRLDRKIEFPFPDRRQK 325

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
             + ++ + KMN+ P+V  EE     +  + A ++A+C EAGM A+R +R VV+ +D 
Sbjct: 326 RLVFQVCTGKMNLSPEVDLEEFVTRPEKLSGADIQAICQEAGMLAVRKNRYVVLPKDL 383

dbj|BAB26990.1| unnamed protein product [Mus musculus]
(406 aa)

Score: 288 bits (738), Expect: 2.10399e-76
Length: 317, Idn/Pos/Gap = 155/211/3 (48%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 324

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR     V  EDF 
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERGVHVTQEDFE 384

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 385 MAVAKVMQKDSEKNMSI 401

gb|AAU84927.1| putative 26S protease regulatory subunit 8 [Toxoptera citricida]
(408 aa)

Score: 288 bits (738), Expect: 2.10399e-76
Length: 317, Idn/Pos/Gap = 153/213/3 (48%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D++++ P   V +  +SY + + LP + D  V    V++ P
Sbjct:  87 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 146

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD QI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 147 DSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 206

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 207 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 266

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P+E A
Sbjct: 267 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDTALLRPGRIDRKIEFPPPNEEA 326

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  ILRIHSRKMN+   ++ +++A      + A +K VC EAGM ALR  R  V  +DF 
Sbjct: 327 RWDILRIHSRKMNLTRGINLKKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQDDFE 386

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 387 MAVAKVMQKDSEKNMSI 403

gb|AAP80726.1| 26S proteasome subunit [Griffithsia japonica]
(284 aa)

Score: 288 bits (737), Expect: 2.79413e-76
Length: 268, Idn/Pos/Gap = 147/193/0 (54%/72%/0%)

Query: 217 LPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGV 276
           L ++ D  V   +VD+ P E +ADIGGL+ QI+E+ EAV LP+TH  L+E +GIKPPKGV
Sbjct:   7 LADDTDPMVSVMKVDKAPLESYADIGGLETQIQEIKEAVELPLTHPELYEDIGIKPPKGV  66

Query: 277 LMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSII 336
           ++YG PGTGKTLLA+A A  T ATFL++ G+ L+Q ++GDG +LVR+ F +A+  APSI+
Sbjct:  67 ILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEDMAPSIV 126

Query: 337 FIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALM 396
           FIDE+DA+GTKR+D+   G+RE QRTMLELLNQLDGFD   DV+VL ATNR + LD AL+
Sbjct: 127 FIDEIDAVGTKRYDTTSGGEREIQRTMLELLNQLDGFDSRGDVKVLLATNRIETLDPALL 186

Query: 397 RSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEA 456
           R GR+DRKIEFP PDE  + R   IH+ +M +  DV+ EE   + D+ + A +KA+C EA
Sbjct: 187 RPGRIDRKIEFPLPDEKTKRRXFSIHTGRMTLAGDVNXEEFVMNKDELSGADIKAICTEA 246

Query: 457 GMAALRADRKVVIHEDFIDGIAAVQAKK 484
           G+ ALR  R  V+H DF      V  KK
Sbjct: 247 GLMALRERRMKVMHADFKKARENVLYKK 274

gb|AAF22521.1| 26S proteasome AAA-ATPase subunit RPT1a [Arabidopsis thaliana]
(426 aa)

Score: 288 bits (736), Expect: 3.01203e-76
Length: 288, Idn/Pos/Gap = 146/197/0 (50%/68%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y I   LP + D  V    V+E+P   + D+GG  +QIE++ 
Sbjct: 122 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 181

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LPM H   F ++GI PPKGVL YGPPGTGKTLLARA A +T A F+++ G+ LVQ 
Sbjct: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   I+F DE+DAIG  RFD    GD E QRTMLE++NQLDG
Sbjct: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++VL ATNRPD LD AL+RSGRLDRK+EF  PD  +R +I +IH+R MN   D+
Sbjct: 302 FDARGNIKVLMATNRPDTLDPALLRSGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E LAR   +   A +++VC EAGM A+RA RK V  +DF+D +  V
Sbjct: 362 RFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409

pir||D87802 protein C10G11.8 [imported] - Caenorhabditis elegans
(493 aa)

Score: 288 bits (736), Expect: 3.86874e-76
Length: 323, Idn/Pos/Gap = 155/209/6 (47%/64%/1%)

Query: 169 NQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYL------ILEKLPEEYD 222
           + +  AVVV   +R+  ++PI  +VD   LR   LV V            I+  L ++ D
Sbjct: 162 DDEKHAVVVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKID 221

Query: 223 ARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPP 282
           +     +V++ P E F DIGG + QI+E+ E+V LP+TH   +E +GI  PKGV++YG P
Sbjct: 222 SNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEP 281

Query: 283 GTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD 342
           GTGKTLLA+A A  T ATF++  G+ LVQ   G+GARLVR  F +AK++APSI+FIDE+D
Sbjct: 282 GTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEID 341

Query: 343 AIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLD 402
           A+GTKRFD+   G++E QRT+LELLNQLDGF+   DV+++ ATNR D LD AL+R GR+D
Sbjct: 342 AVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRID 401

Query: 403 RKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           RKIE P PDE  R +I  IH+  M +   V+YE +       + A +KAVC EAGM ALR
Sbjct: 402 RKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALR 461

Query: 463 ADRKVVIHEDFIDGIAAVQAKKK 485
           A RK V  +DF   + +V   KK
Sbjct: 462 AQRKCVGTDDFEKAVKSVMLSKK 484

ref|NP_608447.1| CG1489-PA [Drosophila melanogaster]
gb|AAF50835.1| CG1489-PA [Drosophila melanogaster]
gb|AAK93156.1| LD26005p [Drosophila melanogaster]
sp|O18413|PRS8_DROME 26S protease regulatory subunit 8
gb|AAC63219.1| Pros45 proteosome subunit homolog [Drosophila melanogaster]
(405 aa)

Score: 287 bits (735), Expect: 4.24062e-76
Length: 317, Idn/Pos/Gap = 153/213/3 (48%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  +SY + + LP + D  V    V++ P
Sbjct:  84 VLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 143

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 144 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 263

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P+E A
Sbjct: 264 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 323

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 324 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 383

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 384 MAVAKVMQKDSEKNMSI 400

gb|AAO73475.1| putative 26S proteasome regulatory subunit 4 [Sulfolobus acidocaldarius]
(396 aa)

Score: 287 bits (735), Expect: 4.49567e-76
Length: 311, Idn/Pos/Gap = 148/219/2 (47%/70%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+V++S+   + + +   VDVS+L+PG  V +++    I++ LP   D  VK+FE+ E+P
Sbjct:  72 VIVRSSSGPNLVVNVATNVDVSKLKPGMSVALSQRGSTIIDILPNREDIIVKSFELIEKP 131

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              ++DIGGL+ QI E+ E V LP+ +K LFE +GI+PPKGVL+YGPPGTGKT+LA+A A
Sbjct: 132 NIHYSDIGGLEDQINELREVVELPLKNKKLFEELGIEPPKGVLLYGPPGTGKTMLAKAVA 191

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
           A++ ATF+ +  +   Q F+G+GAR+VR+ F LA+KKAPSIIFIDELDAI  +R D   S
Sbjct: 192 AESNATFIHVVASEFAQKFVGEGARIVREVFELARKKAPSIIFIDELDAIAARRIDIGTS 251

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+RE QRT+++LL ++DGF   D+V+++AATNR DILD A++R GR DR IE P PDE  
Sbjct: 252 GEREIQRTLMQLLAEIDGFKALDNVKIIAATNRIDILDPAILRPGRFDRLIEVPLPDEKG 311

Query: 415 RARILRIHSRKMNVHPD--VSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHED 472
           R  I +I+ ++M ++ +  ++Y+ +A+ TD F+ A +K VC EAG  A+R  R+ +  +D
Sbjct: 312 RKEIFKIYLQRMRINENDKLNYDLIAQLTDGFSGADIKNVCTEAGYMAIREGRESIKFQD 371

Query: 473 FIDGIAAVQAK 483
            I  I  ++ K
Sbjct: 372 IIRAIDKIKKK 382

gb|AAS47025.1| proteasome 26S ATPase subunit 1 [Oreochromis mossambicus]
(256 aa)

Score: 287 bits (734), Expect: 5.77436e-76
Length: 243, Idn/Pos/Gap = 140/187/0 (57%/76%/0%)

Query: 220 EYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMY 279
           + D  V   +V++ P E +ADIGGLD QI+E+ E+V LP+TH   +E +GIKPPKGV++Y
Sbjct:   5 DIDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILY  64

Query: 280 GPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFID 339
           GPPGTGKTLLA+A A QT ATFL++ G+ L+Q ++GDG +LVR+ F +A++ APSI+FID
Sbjct:  65 GPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFID 124

Query: 340 ELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSG 399
           E+DAIGTKR+DS+  G+RE QRTMLELLNQLDGFD   DV+V+ ATNR +  D AL+R G
Sbjct: 125 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETFDPALIRPG 184

Query: 400 RLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMA 459
           R+DRKIEFP PDE  + RI +IH+ +M V  DV+ ++L  + DD + A +KA+C EAG+ 
Sbjct: 185 RIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLM 244

Query: 460 ALR 462
           ALR
Sbjct: 245 ALR 247

gb|EAL32792.1| GA13327-PA [Drosophila pseudoobscura]
(405 aa)

Score: 287 bits (734), Expect: 6.02036e-76
Length: 317, Idn/Pos/Gap = 153/213/3 (48%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  +SY + + LP + D  V    V++ P
Sbjct:  84 VLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 143

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 144 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 263

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P+E A
Sbjct: 264 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 323

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 324 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 383

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 384 MAVAKVMQKDSEKNMSI 400

gb|EAA54685.1| hypothetical protein MG05477.4 [Magnaporthe grisea 70-15]
ref|XP_360102.1| hypothetical protein MG05477.4 [Magnaporthe grisea 70-15]
(459 aa)

Score: 287 bits (734), Expect: 6.48986e-76
Length: 298, Idn/Pos/Gap = 153/208/0 (51%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   VD   L PG  V ++  S  I+  L ++ D  V   ++D+ PT
Sbjct: 141 IVSSTTGPEYYVSIMSFVDKDLLEPGASVLLHHKSVSIVGVLTDDADPLVSVMKLDKAPT 200

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL++QI+EV E+V LP+ H  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 201 ESYADIGGLEQQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 260

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RLVR  F +A + APSI+FIDE+DAIGTKR+DS   G
Sbjct: 261 QTSATFLRIVGSELIQKYLGDGPRLVRQLFQVAAENAPSIVFIDEIDAIGTKRYDSTSGG 320

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD+  +
Sbjct: 321 EREVQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTK 380

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +I  +H+ KM+++ DV  EE     DD + A +KA+C EAG+ ALR  R  V   DF
Sbjct: 381 RKIFTLHTSKMSLNEDVDLEEFIAQKDDLSGADIKAICSEAGLMALRERRMRVQMADF 438

gb|EAA04200.3| ENSANGP00000016050 [Anopheles gambiae str. PEST]
ref|XP_308557.2| ENSANGP00000016050 [Anopheles gambiae str. PEST]
(403 aa)

Score: 286 bits (733), Expect: 6.88019e-76
Length: 317, Idn/Pos/Gap = 154/213/3 (48%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D++++ P   V +  +SY + + LP + D  V    V++ P
Sbjct:  82 VLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 141

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 142 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 201

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 202 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 261

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P+E A
Sbjct: 262 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 321

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 322 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 381

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 382 MAVAKVMQKDSEKNMSI 398

gb|EAA44836.2| ENSANGP00000023984 [Anopheles gambiae str. PEST]
ref|XP_311871.2| ENSANGP00000023984 [Anopheles gambiae str. PEST]
(414 aa)

Score: 286 bits (733), Expect: 7.11369e-76
Length: 316, Idn/Pos/Gap = 146/207/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     DE+P 
Sbjct:  98 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLNADEKPD 157

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +E+ EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 158 VQYSDIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 217

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ +P+IIFIDE+DAI TKRFD+    
Sbjct: 218 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGA 277

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 278 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 337

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  DV  E+     D  + A + A+C EAGM A+R +R +V+ +DF  
Sbjct: 338 RLIFSTITAKMNLSEDVDLEDFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEK 397

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K +    +Y
Sbjct: 398 GYKNNIKKDETEHEFY 413

gb|AAC48284.1| DUG [Drosophila melanogaster]
(405 aa)

Score: 286 bits (733), Expect: 7.47889e-76
Length: 317, Idn/Pos/Gap = 153/213/3 (48%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  +SY + + LP + D  V    V++ P
Sbjct:  84 VLVKVHPEGKSVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 143

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 144 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 263

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P+E A
Sbjct: 264 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 323

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 324 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 383

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 384 MAVAKVMQKDSEKNMSI 400

gb|EAL49843.1| 26s protease regulatory subunit [Entamoeba histolytica HM-1:IMSS]
(417 aa)

Score: 286 bits (733), Expect: 7.60474e-76
Length: 312, Idn/Pos/Gap = 152/206/1 (48%/66%/0%)

Query: 169 NQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAF 228
           +++ P  V+         +     V+   ++ G  VGV++  Y I   LP + D  V   
Sbjct:  90 DEREPRYVISIKEYAKFVVGKSNRVEKDAVQDGTRVGVDRARYEIKMALPPKIDPSVSVM 149

Query: 229 EVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTL 288
           +V+E+P   + DIGG  +QIE + E V LPM H   FE +GI PPKGVL+YGPPGTGKTL
Sbjct: 150 QVEEKPDVTYKDIGGCKEQIERIREVVELPMLHPEAFENLGIDPPKGVLLYGPPGTGKTL 209

Query: 289 LARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKR 348
           LARA A +T++TF+++ G+ LVQ ++G+GA++VRD F +AK K   IIF DE+DAIG  R
Sbjct: 210 LARAVANRTESTFVRVIGSELVQKYVGEGAKMVRDLFDMAKSKKSCIIFFDEIDAIGGTR 269

Query: 349 FDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFP 408
           F  D +G+ E QRTMLEL+NQLDGFD+  +++VL ATNRPD LD AL+R GRLDRKIEF 
Sbjct: 270 FQDD-TGESEVQRTMLELINQLDGFDKRGNIKVLMATNRPDTLDPALVRPGRLDRKIEFG 328

Query: 409 HPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVV 468
            PD   R  I +IH++ M+V  D+ Y+ LAR   +   A +++VC EAGM A+RA RKVV
Sbjct: 329 LPDIEGRTEIFKIHTKPMSVAKDIRYDLLARLCPNATGAEIQSVCTEAGMFAIRARRKVV 388

Query: 469 IHEDFIDGIAAV 480
              DF+D +  V
Sbjct: 389 TERDFLDAVEKV 400

gb|EAA08108.2| ENSANGP00000017654 [Anopheles gambiae str. PEST]
ref|XP_311870.2| ENSANGP00000017654 [Anopheles gambiae str. PEST]
(439 aa)

Score: 286 bits (733), Expect: 8.1978e-76
Length: 316, Idn/Pos/Gap = 146/207/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     DE+P 
Sbjct: 123 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLNADEKPD 182

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +E+ EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 183 VQYSDIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 242

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ +P+IIFIDE+DAI TKRFD+    
Sbjct: 243 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGA 302

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 303 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 362

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  DV  E+     D  + A + A+C EAGM A+R +R +V+ +DF  
Sbjct: 363 RLIFSTITAKMNLSEDVDLEDFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEK 422

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K +    +Y
Sbjct: 423 GYKNNIKKDETEHEFY 438

ref|XP_468146.1| 26S proteasome regulatory particle triple-A ATPase subunit1 [Oryza sativa (japonica cultivar-group)]
dbj|BAD35822.1| 26S protease regulatory subunit 7 [Oryza sativa (japonica cultivar-group)]
dbj|BAD35266.1| 26S protease regulatory subunit 7 [Oryza sativa (japonica cultivar-group)]
dbj|BAD19299.1| 26S proteasome regulatory particle triple-A ATPase subunit1 [Oryza sativa (japonica cultivar-group)]
sp|Q9FXT9|PRS7_ORYSA 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1)
dbj|BAB17624.1| 26S proteasome regulatory particle triple-A ATPase subunit1 [Oryza sativa (japonica cultivar-group)]
(426 aa)

Score: 286 bits (732), Expect: 9.60608e-76
Length: 288, Idn/Pos/Gap = 145/195/0 (50%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y I   LP + D  V    V+E+P   + D+GG  +QIE++ 
Sbjct: 122 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 181

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LPM H   F ++GI PPKGVL YGPPGTGKTLLARA A +T A F+++ G+ LVQ 
Sbjct: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   I+F DE+DAIG  RFD    GD E QRTMLE++NQLDG
Sbjct: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++VL ATNRPD LD AL+R GRLDRK+EF  PD   R +I +IH+R MN   D+
Sbjct: 302 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDI 361

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E LAR   +   A +++VC EAGM A+RA RK V  +DF+D +  V
Sbjct: 362 RFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409

gb|AAC18523.1| 26S proteasome subunit 7 [Prunus persica]
sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1)
(425 aa)

Score: 286 bits (732), Expect: 1.06177e-75
Length: 288, Idn/Pos/Gap = 145/196/0 (50%/68%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y I   LP + D  V    V+E+P   + D+GG  +QIE++ 
Sbjct: 121 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 180

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LPM H   F ++GI PPKGVL YGPPGTGKTLLARA A +T A F+++ G+ LVQ 
Sbjct: 181 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 240

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   I+F DE+DAIG  RFD    GD E QRTMLE++NQLDG
Sbjct: 241 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 300

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++VL ATNRPD LD AL+R GRLDRK+EF  PD  +R +I +IH+R MN   D+
Sbjct: 301 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 360

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E LAR   +   A +++VC EAGM A+RA RK V  +DF+D +  V
Sbjct: 361 RFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 408

emb|CAB11558.1| Hypothetical protein Y49E10.1 [Caenorhabditis elegans]
ref|NP_499609.1| proteasome Regulatory Particle, ATPase-like, S8 (46.2 kD) (rpt-6) [Caenorhabditis elegans]
pir||T27048 hypothetical protein Y49E10.1 - Caenorhabditis elegans
(416 aa)

Score: 286 bits (732), Expect: 1.12563e-75
Length: 342, Idn/Pos/Gap = 158/218/3 (46%/63%/0%)

Query: 150 EDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           +++L    E      E         V+VK        + +   +D++ L  G  V +  D
Sbjct:  70 KEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRAD 129

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           SY + + LP + D  V    V++ P   +  +GGLDKQI+E+ E + LP+ H  LF+ +G
Sbjct: 130 SYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALG 189

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
           I  PKGVL++GPPGTGKTLLARA A  T+ TF++++G+ LVQ FIG+GAR+VR+ F +A+
Sbjct: 190 IAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 249

Query: 330 KKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
           + APSIIF+DE+D+IG+ R +    GD E QRTMLELLNQLDGF+   +++V+ ATNR D
Sbjct: 250 EHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 309

Query: 390 ILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAML 449
           ILD AL+R GR+DRKIEFP PDE ARA IL+IHSRKMN+   ++  ++A      + A +
Sbjct: 310 ILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEV 369

Query: 450 KAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAK---KKMSL 488
           K+VC EAGM ALR  R  V  EDF   +  V  K   K MS+
Sbjct: 370 KSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKNMSI 411

gb|AAH80137.1| 26S protease regulatory subunit 7 [Xenopus tropicalis]
(433 aa)

Score: 286 bits (731), Expect: 1.14457e-75
Length: 314, Idn/Pos/Gap = 146/206/0 (46%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LDAALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDAALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           V   +DF++ +  V
Sbjct: 403 VATEKDFLEAVNKV 416

pir||T09104 26S proteasome ATPase chain - spinach
sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1)
dbj|BAA13021.1| 26S proteasome ATPase subunit [Spinacia oleracea]
(426 aa)

Score: 286 bits (731), Expect: 1.19333e-75
Length: 288, Idn/Pos/Gap = 145/195/0 (50%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y I   LP + D  V    V+E+P   + D+GG  +QIE++ 
Sbjct: 122 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 181

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LPM H   F ++GI PPKGVL YGPPGTGKTLLARA A +T A F+++ G+ LVQ 
Sbjct: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   I+F DE+DAIG  RFD    GD E QRTMLE++NQLDG
Sbjct: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++VL ATNRPD LD AL+R GRLDRK+EF  PD   R +I +IH+R MN   D+
Sbjct: 302 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDI 361

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E LAR   +   A +++VC EAGM A+RA RK V  +DF+D +  V
Sbjct: 362 RFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409

emb|CAH91432.1| hypothetical protein [Pongo pygmaeus]
(398 aa)

Score: 286 bits (731), Expect: 1.23383e-75
Length: 317, Idn/Pos/Gap = 154/210/3 (48%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  77 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKTLPNKVDPLVSLMMVEKVP 136

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 137 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 196

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ  IG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 197 HHTDCTFIRVSGSELVQKLIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 256

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
            D E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 257 RDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 316

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 317 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRDRRVHVTQEDFE 376

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 377 MAVAKVMQKDSEKNMSI 393

emb|CAB88559.2| probable 26S ATP/ubiquitin-dependent proteinase chain S4 [Neurospora crassa]
(459 aa)

Score: 286 bits (731), Expect: 1.41005e-75
Length: 298, Idn/Pos/Gap = 152/208/0 (51%/69%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +++    ++ I   VD   L PG  V ++  S  I+  L ++ D  V   ++D+ PT
Sbjct: 141 IVSSTSGPEYYVSIMSFVDKDLLEPGASVLLHHKSVSIVGVLTDDTDPAVSVMKLDKAPT 200

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL++QI+EV E+V LP+ H  L+E +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 201 ESYADIGGLEQQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 260

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ G+ L+Q ++GDG RLVR  F +A + APSI+FIDE+DAIGTKR+DS   G
Sbjct: 261 QTSATFLRIVGSELIQKYLGDGPRLVRQLFQVAAENAPSIVFIDEIDAIGTKRYDSTSGG 320

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   DV+V+ ATN+ + LD AL+R GR+DRKI F +PD+  +
Sbjct: 321 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIESLDPALIRPGRIDRKILFENPDQNTK 380

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +I  +H+ KM+++ DV  EE     DD + A +KA+C EAG+ ALR  R  V   DF
Sbjct: 381 RKIFTLHTSKMSLNEDVDLEEFIAQKDDLSGADIKAICSEAGLMALRERRMRVQMADF 438

ref|NP_731401.2| CG9475-PB, isoform B [Drosophila melanogaster]
gb|AAN13443.2| CG9475-PB, isoform B [Drosophila melanogaster]
(389 aa)

Score: 286 bits (731), Expect: 1.47012e-75
Length: 317, Idn/Pos/Gap = 143/210/0 (45%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ +   +D  +L+P   VG++K S  +++ +P E D+ +     DE+P 
Sbjct:  73 IVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPD 132

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGGLD Q +E+ EAV LP+TH  L++++GI PP+GVL++GPPG GKT+LA+A A 
Sbjct: 133 ISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAH 192

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LAK+ +PSIIFIDE+DAI TKRFD+    
Sbjct: 193 HTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGA 252

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFD+  +++V+ ATNR D LD AL+R GRLDRKIE P PD   +
Sbjct: 253 DREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQK 312

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +    + KMNV  DV  E++    D  + A + A+C EAGM A+R +R VV  +DF  
Sbjct: 313 RLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEK 372

Query: 476 GIAAVQAKKKMSLNYYA 492
           G      K +    +Y+
Sbjct: 373 GYKTSVRKDEAQHEFYS 389

gb|AAN15388.1| 26S proteasome ATPase subunit [Arabidopsis thaliana]
gb|AAF02852.1| 26S proteasome ATPase subunit [Arabidopsis thaliana]
ref|NP_175778.1| 26S proteasome AAA-ATPase subunit (RPT1a) [Arabidopsis thaliana]
gb|AAL32938.1| 26S proteasome ATPase subunit [Arabidopsis thaliana]
gb|AAG51970.1| 26S proteasome ATPase subunit; 3861-6264 [Arabidopsis thaliana]
pir||G96577 26S proteasome ATPase subunit [imported] - Arabidopsis thaliana
sp|Q9SSB5|PRS7_ARATH 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a)
(426 aa)

Score: 286 bits (731), Expect: 1.48244e-75
Length: 288, Idn/Pos/Gap = 145/196/0 (50%/68%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y I   LP + D  V    V+E+P   + D+GG  +QIE++ 
Sbjct: 122 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 181

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LPM H   F ++GI PPKGVL YGPPGTGKTLLARA A +T A F+++ G+ LVQ 
Sbjct: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   I+F DE+DAIG  RFD    GD E QRTMLE++NQLDG
Sbjct: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++VL ATNRPD LD AL+R GRLDRK+EF  PD  +R +I +IH+R MN   D+
Sbjct: 302 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E LAR   +   A +++VC EAGM A+RA RK V  +DF+D +  V
Sbjct: 362 RFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409

gb|AAC41735.1| thyroid receptor interactor
prf||2106382A thyroid hormone receptor-interacting protein
(406 aa)

Score: 285 bits (730), Expect: 1.52001e-75
Length: 317, Idn/Pos/Gap = 153/210/3 (48%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G  E QR MLELLNQLDGF+   +++V+ ATNR D+LD+AL+R GR+DRKIEFP P+E A
Sbjct: 265 GSSEVQRQMLELLNQLDGFEATKNIKVIMATNRIDMLDSALLRPGRIDRKIEFPPPNEEA 324

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 325 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 385 MAVAKVMQKDSEKNMSI 401

gb|AAO51692.1| similar to Oryza sativa (Rice). 26S proteasome regulatory particle triple-A ATPase subunit1 [Dictyostelium discoideum]
gb|EAL68960.1| hypothetical protein DDB0168337 [Dictyostelium discoideum]
(428 aa)

Score: 285 bits (730), Expect: 1.7371e-75
Length: 285, Idn/Pos/Gap = 146/195/0 (51%/68%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           +++  G  VGV+++ Y I   LP + DA V   +V+E+P   + D+GG  +QIE++ E V
Sbjct: 127 TDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVV 186

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            +P+ H   F  +GI PPKGVLMYGPPGTGKTL ARA A +T A F+++ G+ LVQ ++G
Sbjct: 187 EMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVG 246

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GAR+VRD F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+NQLDGFD 
Sbjct: 247 EGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDP 306

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++VL ATNRPD LD AL+R GRLDRK+EF  PD   RA I  IH++ M+   D+ +E
Sbjct: 307 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFE 366

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            LAR   +   A +++VC EAGM A+RA RKVV  +DF++ I  V
Sbjct: 367 LLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKV 411

gb|AAU83083.1| ATP-dependent 26S proteasome regulatory subunit [uncultured archaeon GZfos26E7]
(409 aa)

Score: 285 bits (730), Expect: 1.7371e-75
Length: 315, Idn/Pos/Gap = 153/210/0 (48%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V++ST     +     +   +L+PG  V +NK+   I+  +P   D  V+A EV E P 
Sbjct:  89 IVRSSTGPEFIVGSSQFIKDGDLKPGVQVALNKEHLSIVAVIPGSEDPLVQAMEVIESPD 148

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
            D+  IGGLDKQIE +  AV   +T   +FER+GI PPKGVL++GPPGTGKTLLA+A A 
Sbjct: 149 IDYNQIGGLDKQIEVLRGAVEFALTKPEIFERIGIDPPKGVLLFGPPGTGKTLLAKAVAT 208

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +T ATF+++ G+ LVQ +IG+GAR+VRD F +A+KKAP+IIFIDELD+IG  R D   SG
Sbjct: 209 RTDATFIRVVGSELVQKYIGEGARMVRDVFEMARKKAPAIIFIDELDSIGAVRLDDASSG 268

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
            RE QRT+++LL+++DGF+   DV +LAATNR DILD AL+R GR DR +  P PD  AR
Sbjct: 269 GREVQRTLMQLLSEMDGFNSRGDVCILAATNRWDILDPALIRPGRFDRLVYVPIPDREAR 328

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            +IL IH++KM +  DV ++ +   T+D N A L+A+ +EAGM A+R D   V  +DF D
Sbjct: 329 VKILLIHTKKMRLAGDVDFDRIVTLTEDANGATLRAIVMEAGMCAVREDADAVYQKDFED 388

Query: 476 GIAAVQAKKKMSLNY 490
            I  +   + M   Y
Sbjct: 389 AIKHIMNPEGMVDRY 403

gb|EAA22411.1| tat-binding protein homolog [Plasmodium yoelii yoelii]
(442 aa)

Score: 285 bits (730), Expect: 1.84158e-75
Length: 304, Idn/Pos/Gap = 145/209/1 (47%/68%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK +      + I   +D+++  P   V +  DSY + + LP + D  V   +V++ P
Sbjct: 102 VLVKINPEGKYVVDIASHIDIAKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVP 161

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD+Q++EV E + LP+ H  +FE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 162 DSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 221

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG++R + +  
Sbjct: 222 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEH- 280

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTM+ELLNQLDGF+   +++V+  TNR DILD AL+R GR+DRKIEFP+P+  A
Sbjct: 281 GDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDDALLRPGRIDRKIEFPNPNVEA 340

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   +   ++A   ++ + A +KAVC EAGM ALR  R  V  EDF 
Sbjct: 341 RIEILKIHSRKMNLMRGIDMVKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 400

Query: 475 DGIA 478
             +A
Sbjct: 401 MAVA 404

gb|EAA16768.1| 26S proteasome ATPase [Plasmodium yoelii yoelii]
(636 aa)

Score: 285 bits (729), Expect: 2.15794e-75
Length: 316, Idn/Pos/Gap = 142/207/0 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++     ++ I   ++  +L+P   V +++ S+ I+  LP E D+ ++  +V ERP 
Sbjct: 319 IVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQVSERPN 378

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             + D+GGLD Q +E+ EAV LP+    L+E++GI+PP G+L+YGPPGTGKT+L +A A 
Sbjct: 379 VKYTDLGGLDTQKQEMREAVELPLKSPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 438

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +TK TF+ + G+  VQ ++G+G R+VRD F LA++ +PSIIFIDE+DAI TKRFD+    
Sbjct: 439 ETKVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGA 498

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFD++ +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 499 DREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQK 558

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +    KMNV  DV+ E     TD  +AA + A+  E+GM A+R +R ++   DF  
Sbjct: 559 RLIFQTIISKMNVSSDVNIENFVVRTDKISAADIAAIAQESGMQAIRKNRYIITASDFEQ 618

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K+     +Y
Sbjct: 619 GYRTHVRKQLRDYEFY 634

gb|EAK95427.1| likely 26S proteasome regulatory particle ATPase Rpt6p [Candida albicans SC5314]
(401 aa)

Score: 285 bits (728), Expect: 2.59275e-75
Length: 309, Idn/Pos/Gap = 148/207/0 (47%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +DV +L P   V +  DS+ + + LP + D  V    V++ P
Sbjct:  80 VLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKADSHDLYKILPNKVDPLVSLMMVEKVP 139

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A
Sbjct: 140 DSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+  F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 200 HHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG 259

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+ + D++++ ATNR DILD AL+R GR+DRKIEFP P  AA
Sbjct: 260 GDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAA 319

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSR MN+   ++  ++A   +  + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 320 RTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 379

Query: 475 DGIAAVQAK 483
             +A V +K
Sbjct: 380 LAVAKVMSK 388

ref|XP_393513.1| similar to ENSANGP00000023984 [Apis mellifera]
(400 aa)

Score: 285 bits (728), Expect: 2.65846e-75
Length: 301, Idn/Pos/Gap = 142/204/0 (47%/67%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +   + DE+P 
Sbjct:  84 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 143

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +E+ EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 144 IQYSDIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAR 203

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ +P+IIF+DE+DAI TKRFD+    
Sbjct: 204 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFVDEIDAIATKRFDAQTGA 263

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 264 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 323

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + A+C EAGM A+R +R +V+ +DF  
Sbjct: 324 RLIFSTITAKMNLSEEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLAKDFEK 383

Query: 476 G 476
           G
Sbjct: 384 G 384

emb|CAD25695.1| 26S PROTEASOME REGULATORY SUBUNIT 4 [Encephalitozoon cuniculi GB-M1]
ref|NP_586091.1| 26S PROTEASOME REGULATORY SUBUNIT 4 [Encephalitozoon cuniculi GB-M1]
(424 aa)

Score: 285 bits (728), Expect: 2.74869e-75
Length: 312, Idn/Pos/Gap = 152/212/1 (48%/67%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           ++ T      ++ I   VD   L PG  V +N     ++  L  E D  V   ++++ P+
Sbjct: 106 IITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPS 165

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGL++QI+E+ E+V LP+T+  L++ +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 166 ETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVAN 225

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           QT ATFL++ GT L+Q ++G+G +LVR+ F +A   APSIIFIDE+DAIG KR+++   G
Sbjct: 226 QTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSGG 285

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
            RE QRTMLELLNQLDGFD  +D++V+ ATN+ + LD AL+R GR+DRKIEF  PD A +
Sbjct: 286 RREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATK 345

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            +I  IH+ +M +   V+ E L  S +D + A +KA+C EAGM ALR  RK V  +DFI 
Sbjct: 346 KKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFIS 405

Query: 476 GIAAV-QAKKKM 486
               V  +K+KM
Sbjct: 406 AREKVFFSKQKM 417

emb|CAA82554.1| mts2 gene [Schizosaccharomyces pombe]
emb|CAB58406.1| mts2 [Schizosaccharomyces pombe]
ref|NP_595480.1| 26s protease regulatory subunit 4 homolog [Schizosaccharomyces pombe]
pir||S39348 26S ATP/ubiquitin-dependent proteinase chain S4 - fission yeast (Schizosaccharomyces pombe)
sp|P36612|PRS4_SCHPO 26S protease regulatory subunit 4 homolog (Protein mts2)
prf||2001429A ubiquitin-dependent protease
(448 aa)

Score: 285 bits (728), Expect: 2.77172e-75
Length: 289, Idn/Pos/Gap = 151/206/1 (52%/71%/0%)

Query: 186 FLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLD 245
           ++ I   VD   L PG  V ++  +  I+  L ++ D  +   ++D+ PTE +ADIGGL+
Sbjct: 138 YVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLE 197

Query: 246 KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA 305
            QI+E+ EAV LP+TH  L+E +GIKPPKGV++YG PGTGKTLLA+A A QT ATFL++ 
Sbjct: 198 SQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVV 257

Query: 306 GTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLE 365
           G+ L+Q ++GDG RLVR  F  A++ +PSI+FIDE+DAIGTKR+D+    +RE QRTMLE
Sbjct: 258 GSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLE 317

Query: 366 LLNQLDGFDQND-DVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSR 424
           LLNQLDGFD +  D++V+ ATNR   LD AL+R GR+DRKI F +PDEA + +I  IH+ 
Sbjct: 318 LLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTS 377

Query: 425 KMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           KMN+  DV+ EEL +  DD + A +KA+  EAG+ ALR  R  V+ +DF
Sbjct: 378 KMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDF 426

gb|AAG42150.1| 26S proteasome RPT6a subunit [Dactylis glomerata]
(452 aa)

Score: 285 bits (728), Expect: 2.91401e-75
Length: 318, Idn/Pos/Gap = 156/216/4 (49%/67%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D++++ P   V +  DSY++   LP + D  V   +V++ P
Sbjct: 130 VLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVP 189

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 190 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 249

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR- 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 250 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGTG 309

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GD E QRTMLELLNQLDGF+ ++ ++VL ATNR DILD AL+R GR+DRKIEFP+P+E 
Sbjct: 310 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNED 369

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +R  IL+IHS  MN+   +  +++A   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 370 SRGDILKIHSTTMNLMRGIDLKKIAGKMNGASGAELKAVCTEAGMFALRERRVHVTQEDF 429

Query: 474 IDGIAAVQAK---KKMSL 488
              +A V  K   K MSL
Sbjct: 430 EMAVAKVMKKDNEKNMSL 447

emb|CAA86294.1| DEAD-box ATPase [Manduca sexta]
sp|P46507|PRS6B_MANSE 26S protease regulatory subunit 6B (ATPase MS73)
(415 aa)

Score: 285 bits (728), Expect: 2.96305e-75
Length: 316, Idn/Pos/Gap = 146/207/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +   + DE+P 
Sbjct:  99 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 158

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +E+ EAV LP+TH  L+ ++GI+PP+GVLMYGPPG GKT+LA A A 
Sbjct: 159 VQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAH 218

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ +P+IIFIDE+DAI TKRFD+    
Sbjct: 219 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGA 278

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 279 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 338

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  EE     D  + A + A+C EAGM A+R +R +V+ +DF  
Sbjct: 339 RLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEK 398

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K +    +Y
Sbjct: 399 GYKNNIKKDESEYEFY 414

emb|CAB01414.1| Hypothetical protein C52E4.4 [Caenorhabditis elegans]
sp|Q18787|PRS7_CAEEL Probable 26S protease regulatory subunit 7
ref|NP_506005.1| proteasome Regulatory Particle, ATPase-like, S7 (48.6 kD) (rpt-1) [Caenorhabditis elegans]
(435 aa)

Score: 285 bits (728), Expect: 2.98787e-75
Length: 313, Idn/Pos/Gap = 145/208/0 (46%/66%/0%)

Query: 168 ANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKA 227
           +++  P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V  
Sbjct: 106 SDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTM 165

Query: 228 FEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKT 287
            +V+E+P   ++D+GG   QIE++ E V  P+ H   +  +GI+PPKGVL+YGPPGTGKT
Sbjct: 166 MQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225

Query: 288 LLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTK 347
           L ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DA+G  
Sbjct: 226 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGA 285

Query: 348 RFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEF 407
           RFD  + GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRK+EF
Sbjct: 286 RFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 345

Query: 408 PHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKV 467
             PD A RA IL+IH+++M+V  D+ Y+ LAR   +   A +++VC EAGM A+RA RKV
Sbjct: 346 ALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405

Query: 468 VIHEDFIDGIAAV 480
              +DF++ I  V
Sbjct: 406 ATEKDFLEAINKV 418

gb|EAK95373.1| likely 26S proteasome regulatory particle ATPase Rpt6p [Candida albicans SC5314]
(401 aa)

Score: 285 bits (728), Expect: 3.27508e-75
Length: 309, Idn/Pos/Gap = 148/207/0 (47%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +DV +L P   V +  DS+ + + LP + D  V    V++ P
Sbjct:  80 VLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVEKVP 139

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A
Sbjct: 140 DSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+  F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 200 HHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG 259

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+ + D++++ ATNR DILD AL+R GR+DRKIEFP P  AA
Sbjct: 260 GDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAA 319

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSR MN+   ++  ++A   +  + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 320 RTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 379

Query: 475 DGIAAVQAK 483
             +A V +K
Sbjct: 380 LAVAKVMSK 388

gb|AAH41186.1| Unknown (protein for IMAGE:4681581) [Xenopus laevis]
(444 aa)

Score: 284 bits (727), Expect: 3.56007e-75
Length: 314, Idn/Pos/Gap = 145/205/0 (46%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 114 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 173

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 174 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 233

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 234 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 293

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 294 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 353

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 354 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 413

Query: 467 VVIHEDFIDGIAAV 480
           V   +DF++ +  V
Sbjct: 414 VATEKDFLEAVNKV 427

emb|CAD26276.1| 26S PROTEASOME REGULATORY SUBUNIT 7 [Encephalitozoon cuniculi GB-M1]
ref|NP_597641.1| 26S PROTEASOME REGULATORY SUBUNIT 7 [Encephalitozoon cuniculi GB-M1]
(415 aa)

Score: 284 bits (727), Expect: 3.5899e-75
Length: 288, Idn/Pos/Gap = 146/198/2 (50%/68%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           VD S ++ G  VGV+++ Y I+  LP + DA V   +V+ERP   + DIGG  ++IE++ 
Sbjct: 113 VDSSLIQEGMRVGVDRNKYQIILPLPRKIDASVTLMQVEERPDVTYHDIGGCKEEIEKIR 172

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V  P+ +   F  +GI PPKGVL+YGPPGTGKTLLARA A +T A F+++ G+ LVQ 
Sbjct: 173 EVVEAPLLNPERFVALGIDPPKGVLLYGPPGTGKTLLARAVANRTNACFIRVIGSELVQK 232

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ FA+AK K   IIF DE+DA G  RFD D   D E QRTMLEL+NQLDG
Sbjct: 233 YVGEGARMVREIFAMAKGKKACIIFFDEVDAFGGTRFDDD--DDNEVQRTMLELINQLDG 290

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++VL ATNRPD LD AL+R GRLDRK+EF  PD   R  ILRIH++ M+V  D+
Sbjct: 291 FDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTSILRIHAKTMSVDKDI 350

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            ++ +AR  ++   A L++VC EAGM A+R  RK+   +DF+  +  V
Sbjct: 351 RFDLIARLCNNATGAELRSVCTEAGMFAIRERRKIATEKDFLKAVDKV 398

gb|AAF91244.1| proteasome regulatory ATPase subunit 2 [Trypanosoma brucei]
(437 aa)

Score: 284 bits (727), Expect: 3.65031e-75
Length: 299, Idn/Pos/Gap = 146/205/0 (48%/68%/0%)

Query: 186 FLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLD 245
           ++ +   VD  +L  G  V ++   + ++  L    D  V   +VD+ P E +ADIGGL+
Sbjct: 129 YVAMLSFVDKEKLELGCSVLLHDRYHNVVGLLESNTDPLVSVMKVDKAPQETYADIGGLE 188

Query: 246 KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA 305
            QI+E+ EAV  P++H  LF+ VG+KPPKGV++YG PGTGKTLLA+A A QT ATFL++ 
Sbjct: 189 DQIQEIKEAVEFPLSHPELFDEVGVKPPKGVIVYGVPGTGKTLLAKAVANQTSATFLRVV 248

Query: 306 GTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLE 365
           G+ L+Q + G+G +LVR+ F +A++ +PSI+FIDE+DAIGTKR+D+D  G +E QRTMLE
Sbjct: 249 GSELIQKYSGEGPKLVRELFRVAEENSPSIVFIDEIDAIGTKRYDTDSGGAKEVQRTMLE 308

Query: 366 LLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRK 425
           LL QLDGFD  +DV+V+ ATNR + LD AL+R GR+DRKIEFP PDE  +  I  IH+ +
Sbjct: 309 LLTQLDGFDSCNDVKVIMATNRIETLDPALIRPGRIDRKIEFPFPDEKTKKMIFEIHTSR 368

Query: 426 MNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKK 484
           M++  DV   E   + D+ + A ++A+C EAG+ ALR  R  V   DF+ G   VQ +K
Sbjct: 369 MSLAEDVDLSEFIPAKDEMSGADIQAICTEAGLLALRDRRMKVCQSDFVKGKENVQYRK 427

gb|AAV36920.1| RE01104p [Drosophila melanogaster]
(405 aa)

Score: 284 bits (727), Expect: 3.68089e-75
Length: 317, Idn/Pos/Gap = 143/210/0 (45%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ +   +D  +L+P   VG++K S  +++ +P E D+ +     DE+P 
Sbjct:  89 IVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPD 148

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGGLD Q +E+ EAV LP+TH  L++++GI PP+GVL++GPPG GKT+LA+A A 
Sbjct: 149 ISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAH 208

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LAK+ +PSIIFIDE+DAI TKRFD+    
Sbjct: 209 HTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGA 268

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFD+  +++V+ ATNR D LD AL+R GRLDRKIE P PD   +
Sbjct: 269 DREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQK 328

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +    + KMNV  DV  E++    D  + A + A+C EAGM A+R +R VV  +DF  
Sbjct: 329 RLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEK 388

Query: 476 GIAAVQAKKKMSLNYYA 492
           G      K +    +Y+
Sbjct: 389 GYKTSVRKDEAQHEFYS 405

gb|AAS07429.1| unknown [Homo sapiens]
(409 aa)

Score: 284 bits (727), Expect: 4.00119e-75
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct:  79 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 138

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 139 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 198

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 199 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 258

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 259 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 318

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 319 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 378

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 379 IATEKDFLEAVNKV 392

emb|CAA56438.1| xMSS1 [Xenopus laevis]
gb|AAH61627.1| 26S protease regulatory subunit 7 [Xenopus tropicalis]
gb|AAH54143.1| XMSS1 protein [Xenopus laevis]
pir||S53709 MSS1 protein homolog - African clawed frog
sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 (MSS1 protein)
ref|NP_989155.1| 26S protease regulatory subunit 7 [Xenopus tropicalis]
prf||2109230A MSS1-like protein
(433 aa)

Score: 284 bits (727), Expect: 4.10261e-75
Length: 314, Idn/Pos/Gap = 145/205/0 (46%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           V   +DF++ +  V
Sbjct: 403 VATEKDFLEAVNKV 416

gb|AAW44743.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_572050.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
(450 aa)

Score: 284 bits (726), Expect: 4.42256e-75
Length: 302, Idn/Pos/Gap = 152/202/2 (50%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV++ +Y I+  LP + D  V   +V+ERP+  +AD+GG  +QIE++ 
Sbjct: 146 VSPTDVEEGMRVGVDQVTYKIMLPLPPKIDPSVTMMQVEERPSITYADVGGCKEQIEKLR 205

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+     F  +GI+PPKGVL+YGPPGTGKTL ARA A +T +TF+++ G+ LVQ 
Sbjct: 206 EVVELPLLEPERFVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDSTFIRVIGSELVQK 265

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+NQLDG
Sbjct: 266 YIGEGARMVRELFEMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDG 325

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRPD LD AL+R GRLDRK+EF  PD   R  IL+IH + M+V  D+
Sbjct: 326 FDPRGNIKVIMATNRPDTLDPALLRPGRLDRKVEFSLPDNEGRTHILKIHGKSMSVERDI 385

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV--QAKKKMSLNY 490
            Y+ +AR   +   A LKAV  EAGM A+RA RKV    DF+D +  V  Q  K  S   
Sbjct: 386 RYDLIARLCPNATGAELKAVATEAGMFAIRARRKVATERDFLDAVEKVIRQGSKFSSTAL 445

Query: 491 YA 492
           YA
Sbjct: 446 YA 447

emb|CAH93865.1| tat-binding protein homolog, putative [Plasmodium berghei]
(422 aa)

Score: 284 bits (726), Expect: 4.45961e-75
Length: 317, Idn/Pos/Gap = 149/215/4 (47%/67%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK +      + I   +D+++  P   V +  DSY + + LP + D  V   +V++ P
Sbjct: 102 VLVKINPEGKYVVDIASHIDITKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVP 161

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD+Q++EV E + LP+ H  +FE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 162 DSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 221

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG++R + +  
Sbjct: 222 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEH- 280

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTM+ELLNQLDGF+   +++V+  TNR DILD AL+R GR+DRKIEFP+P+  A
Sbjct: 281 GDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDDALLRPGRIDRKIEFPNPNVEA 340

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   +   ++A   ++ + A +KAVC EAGM ALR  R  V  EDF 
Sbjct: 341 RIEILKIHSRKMNLMRGIDMVKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 400

Query: 475 DGIAAV---QAKKKMSL 488
             +A V    A+K  +L
Sbjct: 401 MAVAKVMKQDAEKNFTL 417

ref|NP_651811.1| CG2241-PA [Drosophila melanogaster]
gb|AAM51089.1| SD17676p [Drosophila melanogaster]
gb|AAF57069.1| CG2241-PA [Drosophila melanogaster]
(399 aa)

Score: 284 bits (726), Expect: 4.68855e-75
Length: 320, Idn/Pos/Gap = 149/214/4 (46%/66%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +++ ++ P   V +  +SY + + LP + D  V    V++ P
Sbjct:  79 VLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVP 138

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 139 DSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVA 198

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R ++  +
Sbjct: 199 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETG-T 257

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR D+LD AL+R GR+DRKIEFP P+E A
Sbjct: 258 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEA 317

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 318 RLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 377

Query: 475 DGIAAVQAK---KKMSLNYY 491
             ++ V  K   K MS+  +
Sbjct: 378 MAVSKVMMKDSEKNMSIRKF 397

gb|AAC46996.1| 18-56 protein
sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 (18-56 protein)
(402 aa)

Score: 284 bits (726), Expect: 4.76745e-75
Length: 317, Idn/Pos/Gap = 153/212/3 (48%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   VD++++     V +  +SY + + LP + D  V    V++ P
Sbjct:  81 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 140

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 141 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 200

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+ TF++++G+ LVQ FIG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 201 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 260

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P+E A
Sbjct: 261 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 320

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 321 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 380

Query: 475 DGIAAVQAK---KKMSL 488
             +A V  K   K MS+
Sbjct: 381 MAVAKVMQKDSEKNMSI 397

gb|EAA55729.1| hypothetical protein MG01380.4 [Magnaporthe grisea 70-15]
ref|XP_363454.1| hypothetical protein MG01380.4 [Magnaporthe grisea 70-15]
(389 aa)

Score: 284 bits (726), Expect: 4.80739e-75
Length: 299, Idn/Pos/Gap = 150/200/0 (50%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   VD+++L  G  V +  DSY + + LP   D  V    V++ P
Sbjct:  68 VLVKVHPEGKYVVDIADSVDITKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEKVP 127

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + L + H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 128 DSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T   F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 188 HHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGTSG 247

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P   A
Sbjct: 248 GDSEVQRTMLELLNQLDGFEPTKNIKVIMATNRLDILDPALLRPGRIDRKIEFPPPSVEA 307

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           RA ILRIHSRKMN+   ++  ++A   +  + A LK VC EAGM ALR  R  V  EDF
Sbjct: 308 RADILRIHSRKMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDF 366

ref|NP_701829.1| tat-binding protein homolog [Plasmodium falciparum 3D7]
gb|AAN36553.1| tat-binding protein homolog [Plasmodium falciparum 3D7]
(435 aa)

Score: 284 bits (726), Expect: 4.80739e-75
Length: 317, Idn/Pos/Gap = 149/214/4 (47%/67%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK +      + I   +++S   P   V +  DSY + + LP + D  V   +V++ P
Sbjct: 115 VLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVP 174

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD+Q++EV E + LP+ H  +FE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 175 DSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG++R + +  
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEH- 293

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTM+ELLNQLDGF+   +++V+  TNR DILD AL+R GR+DRKIEFP+P+  A
Sbjct: 294 GDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEA 353

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   +   ++A   ++ + A +KAVC EAGM ALR  R  V  EDF 
Sbjct: 354 RMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 413

Query: 475 DGIAAV---QAKKKMSL 488
             +A V    A+K  +L
Sbjct: 414 MAVAKVMKQDAEKNFTL 430

gb|EAA61634.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
ref|XP_411125.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
(389 aa)

Score: 284 bits (726), Expect: 4.84767e-75
Length: 299, Idn/Pos/Gap = 151/200/0 (50%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   VD+ +L  G  V +  DSY + + LP   D  V    V++ P
Sbjct:  68 VLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEKVP 127

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + L + H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 128 DSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T   F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R DS  S
Sbjct: 188 HHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGS 247

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++++ ATNR DILD AL+R GR+DRKIEFP P   A
Sbjct: 248 GDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEA 307

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           RA ILRIHSR MN+   ++  ++A   +  + A LK VC EAGM ALR  R  V  EDF
Sbjct: 308 RADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDF 366

ref|NP_279562.1| ATP-dependent 26S proteinase regulatory subunit 4 homolog [Halobacterium sp. NRC-1]
gb|AAG19042.1| ATP-dependent 26S proteinase regulatory subunit 4 homolog; PrrIV2 [Halobacterium sp. NRC-1]
pir||F84209 hypothetical protein prrIV2 [imported] - Halobacterium sp. NRC-1
(368 aa)

Score: 284 bits (726), Expect: 4.92925e-75
Length: 315, Idn/Pos/Gap = 158/207/14 (50%/65%/4%)

Query: 159 DEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLP 218
           DEGA  +   N Q     V    R T             L PG  V VN +S  ++ +L 
Sbjct:  44 DEGAVIKQHGNNQEALTEVTDELRAT-------------LEPGSRVAVN-NSLSVVRQLD  89

Query: 219 EEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLM 278
           +E D R +  EVD+ P   + DIGGLD Q+ EV E V LPM    LFE VGI PP GVL+
Sbjct:  90 DEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLL 149

Query: 279 YGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFI 338
           +GPPGTGKTL+A+A A+QT A+F+K+AG+ LV  FIG+GA+LVRD F +A+   P+++FI
Sbjct: 150 HGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFI 209

Query: 339 DELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRS 398
           DE+DAI +KR DS  SGD E QRTM++LL+++DGFD+  D+R++AATNR D+LD A++R 
Sbjct: 210 DEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRP 269

Query: 399 GRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGM 458
           GR DR IE PHP+   R +I RIH+R MNV   V + ELA  T D + A +KA+C EAGM
Sbjct: 270 GRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGM 329

Query: 459 AALRADRKVVIHEDF 473
            A+R DR  V  +DF
Sbjct: 330 FAIRDDRTEVRMQDF 344

gb|EAL19829.1| hypothetical protein CNBG1220 [Cryptococcus neoformans var. neoformans B-3501A]
(450 aa)

Score: 284 bits (726), Expect: 5.49399e-75
Length: 302, Idn/Pos/Gap = 152/202/2 (50%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV++ +Y I+  LP + D  V   +V+ERP+  +AD+GG  +QIE++ 
Sbjct: 146 VSPTDVEEGMRVGVDQVTYKIMLPLPPKIDPSVTMMQVEERPSITYADVGGCKEQIEKLR 205

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+     F  +GI+PPKGVL+YGPPGTGKTL ARA A +T +TF+++ G+ LVQ 
Sbjct: 206 EVVELPLLEPERFVSLGIEPPKGVLLYGPPGTGKTLCARAVANRTDSTFIRVIGSELVQK 265

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+NQLDG
Sbjct: 266 YIGEGARMVRELFEMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDG 325

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRPD LD AL+R GRLDRK+EF  PD   R  IL+IH + M+V  D+
Sbjct: 326 FDPRGNIKVIMATNRPDTLDPALLRPGRLDRKVEFSLPDNEGRTHILKIHGKSMSVERDI 385

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV--QAKKKMSLNY 490
            Y+ +AR   +   A LKAV  EAGM A+RA RKV    DF+D +  V  Q  K  S   
Sbjct: 386 RYDLIARLCPNATGAELKAVATEAGMFAIRARRKVATERDFLDAVEKVIRQGSKFSSTAL 445

Query: 491 YA 492
           YA
Sbjct: 446 YA 447

gb|AAH53187.1| Similar to proteasome (prosome, macropain) 26S subunit, ATPase 2 [Danio rerio]
emb|CAI20760.1| novel protein similar to vertebrate proteasome (prosome, macropain) 26S subunit, ATPase, 2 (PSMC2) (zgc:63995) [Danio rerio]
ref|NP_957260.1| proteasome (prosome, macropain) 26S subunit, ATPase 2 [Danio rerio]
(433 aa)

Score: 284 bits (726), Expect: 5.63325e-75
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 IATEKDFLEAVNKV 416

emb|CAG31125.1| hypothetical protein [Gallus gallus]
(433 aa)

Score: 283 bits (725), Expect: 5.82443e-75
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 IATEKDFLEAVNKV 416

ref|NP_001006225.1| similar to 26S protease regulatory subunit 7 (MSS1 protein) [Gallus gallus]
(433 aa)

Score: 283 bits (725), Expect: 5.82443e-75
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 IATEKDFLEAVNKV 416

dbj|BAD86441.1| proteasome-activating nucleotidase [Thermococcus kodakaraensis KOD1]
ref|YP_184665.1| proteasome-activating nucleotidase [Thermococcus kodakaraensis KOD1]
(397 aa)

Score: 283 bits (725), Expect: 5.87323e-75
Length: 293, Idn/Pos/Gap = 150/204/1 (51%/69%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           ++  +L+PG  V +++ +  I+E LP E D  V  FEV ERP   + DIGGL+KQ++E+ 
Sbjct:  92 IERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELR 151

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           EA+ LP+ H  LFE+VGI+PPKGVL+YGPPG GKTL+A+A A    ATF+++ G+ LV+ 
Sbjct: 152 EAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRK 211

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           FIG+GARLV + F LAK+KAP+IIFIDE+DAIG KR D    G+RE  RT+++LL ++DG
Sbjct: 212 FIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDG 271

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +V+V+AATNRPDILD AL+R GR DR IE P PD   R  IL++H+RKMN+   V
Sbjct: 272 FDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNLK-GV 330

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKK 485
               +A  T+  + A LKA+  EAGM A+R  R  V  +DF+  +  V   +K
Sbjct: 331 DLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVIGSEK 383

gb|AAH10396.1| Proteasome 26S ATPase subunit 4, isoform 2 [Homo sapiens]
ref|NP_694546.1| proteasome 26S ATPase subunit 4 isoform 2 [Homo sapiens]
(387 aa)

Score: 283 bits (725), Expect: 6.33126e-75
Length: 316, Idn/Pos/Gap = 146/208/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct:  71 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 130

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 131 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 190

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 191 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 250

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 251 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 310

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + ++C E+GM A+R +R +V+ +DF  
Sbjct: 311 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 370

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 371 AYKTVIKKDEQEHEFY 386

emb|CAE75362.1| Hypothetical protein CBG23346 [Caenorhabditis briggsae]
(435 aa)

Score: 283 bits (725), Expect: 6.65628e-75
Length: 313, Idn/Pos/Gap = 144/207/0 (46%/66%/0%)

Query: 168 ANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKA 227
           +++  P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V  
Sbjct: 106 SDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTM 165

Query: 228 FEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKT 287
            +V+E+P   ++D+GG   QIE++ E V  P+ H   +  +GI+PPKGVL+YGPPGTGKT
Sbjct: 166 MQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225

Query: 288 LLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTK 347
           L ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DA+G  
Sbjct: 226 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGA 285

Query: 348 RFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEF 407
           RFD  + GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRK+EF
Sbjct: 286 RFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 345

Query: 408 PHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKV 467
             PD   RA IL+IH+++M+V  D+ Y+ LAR   +   A +++VC EAGM A+RA RKV
Sbjct: 346 ALPDLVGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405

Query: 468 VIHEDFIDGIAAV 480
              +DF++ I  V
Sbjct: 406 ATEKDFLEAINKV 418

emb|CAG86175.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_458104.1| unnamed protein product [Debaryomyces hansenii]
(401 aa)

Score: 283 bits (724), Expect: 7.4189e-75
Length: 309, Idn/Pos/Gap = 146/206/0 (47%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D+ +L P   V +  DSY + + LP + D  V    V++ P
Sbjct:  80 VLVKIHPEGKYIVNISKDIDIKKLTPSLRVCLKADSYDLHKILPNKVDPLVSLMMVEKVP 139

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLAR+ A
Sbjct: 140 DSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARSVA 199

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T+  F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 200 HHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRVEGSSG 259

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+ + D++++ ATNR DILD AL+R GR+DRKIEFP P   A
Sbjct: 260 GDSEVQRTMLELLNQLDGFENSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTITA 319

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSR MN+   ++  ++A   +  + A +K VC EAGM ALR  R  +  EDF 
Sbjct: 320 RTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHITQEDFE 379

Query: 475 DGIAAVQAK 483
             +A V +K
Sbjct: 380 LAVAKVMSK 388

emb|CAB91305.1| probable 26S protease subunit RPT6 [Neurospora crassa]
ref|XP_325218.1| probable 26S proteinase subunit protein [MIPS] [Neurospora crassa]
gb|EAA34118.1| probable 26S proteinase subunit protein [MIPS] [Neurospora crassa]
pir||T49402 probable 26S proteinase subunit (SUG1) protein [imported] - Neurospora crassa
(389 aa)

Score: 283 bits (724), Expect: 8.54951e-75
Length: 299, Idn/Pos/Gap = 149/200/0 (49%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   VD+++L  G  V +  DSY + + LP   D  V    V++ P
Sbjct:  68 VLVKVHPEGKYVVDVSDNVDITKLTVGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEKVP 127

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLD+QI+E+ E + L + H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 128 DSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T   F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 188 HHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG 247

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P   A
Sbjct: 248 GDSEVQRTMLELLNQLDGFEPTKNIKVIMATNRLDILDPALLRPGRIDRKIEFPPPSVEA 307

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           RA ILRIHSRKMN+   ++  ++A   +  + A LK VC EAGM ALR  R  V  EDF
Sbjct: 308 RADILRIHSRKMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDF 366

ref|NP_577844.1| ATP-dependent 26S protease regulatory subunit [Pyrococcus furiosus DSM 3638]
gb|AAL80239.1| ATP-dependent 26S protease regulatory subunit [Pyrococcus furiosus DSM 3638]
sp|Q8U4H3|PSMR_PYRFU Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(396 aa)

Score: 283 bits (724), Expect: 8.98841e-75
Length: 293, Idn/Pos/Gap = 151/201/1 (51%/68%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+LRPG  V +++ +  I+E LP   D  V  FEV ERP   + DIGGL KQ++E+ 
Sbjct:  91 IDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELR 150

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           EA+ LP+ H  LFE VGI PPKGVL+YGPPG GKTL+A+A A +  ATF+++ G+ LV+ 
Sbjct: 151 EAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRK 210

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+GARLV + F LAK+KAP+IIFIDE+DAIG KR D    G+RE  RT+++LL ++DG
Sbjct: 211 YIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDG 270

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +V+V+AATNRPDILD AL+R GR DR IE P PD   R  IL++H+R+M +   V
Sbjct: 271 FDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLR-GV 329

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKK 485
               +A  T+  + A LKA+  EAGM A+R  R  V  EDF+  I  V   +K
Sbjct: 330 DLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEK 382

ref|NP_476463.1| proteasome 26S  ATPase subunit 4 [Rattus norvegicus]
gb|AAH63145.1| Proteasome 26S  ATPase subunit 4 [Rattus norvegicus]
gb|AAH12708.1| Proteasome 26S  ATPase subunit 4 [Mus musculus]
sp|Q63570|PRS6B_RAT 26S protease regulatory subunit 6B (TAT-binding protein-7) (TBP-7)
dbj|BAC36835.1| unnamed protein product [Mus musculus]
dbj|BAA09340.1| proteasomal ATPase (Tat-binding protein7) [Rattus norvegicus]
(418 aa)

Score: 283 bits (724), Expect: 9.06372e-75
Length: 316, Idn/Pos/Gap = 146/208/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + ++C E+GM A+R +R +V+ +DF  
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417

gb|AAP36910.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 4 [synthetic construct]
gb|AAX43329.1| proteasome 26S subunit 4 [synthetic construct]
gb|AAX43328.1| proteasome 26S subunit 4 [synthetic construct]
(419 aa)

Score: 283 bits (723), Expect: 1.00182e-74
Length: 316, Idn/Pos/Gap = 146/208/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + ++C E+GM A+R +R +V+ +DF  
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417

gb|EAL36305.1| 26S proteasome regulatory subunit [Cryptosporidium hominis]
(391 aa)

Score: 283 bits (723), Expect: 1.03582e-74
Length: 340, Idn/Pos/Gap = 148/214/0 (43%/62%/0%)

Query: 150 EDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           EDDL   +       E   +      +VK ST     +     +D S+L  G  V ++  
Sbjct:  46 EDDLKALQSVGQIIGEVLRHLDDEKCIVKASTGPRYVVGCRSKLDKSKLTSGTRVALDAT 105

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           +  I+ +LP E D  V     ++  +  ++ +GGL++QI E+ E + LP+T+  LF+RVG
Sbjct: 106 TLTIMRRLPREVDPMVYNMLHEDPGSVSYSQVGGLNEQIREIREVIELPLTNPELFKRVG 165

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
           IK PKGVL+YGPPGTGKTLLARA A+     F+K+  +++V  +IG+ AR++R+ F  AK
Sbjct: 166 IKTPKGVLLYGPPGTGKTLLARAMASSMNCNFMKVVASAIVDKYIGESARVIREMFGYAK 225

Query: 330 KKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
              P +IF+DE+DAIG KRF    S DRE QRT++ELLNQLDGFD+   V+++ ATNRPD
Sbjct: 226 DHQPCVIFMDEIDAIGGKRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPD 285

Query: 390 ILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAML 449
           +LD AL+R GRLDRK+E P P+E +R  IL+IHS K+    ++ ++ + +  D FN A +
Sbjct: 286 VLDPALLRPGRLDRKVEIPLPNETSRVEILKIHSSKLAKQGEIDFDAICKLCDGFNGADM 345

Query: 450 KAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLN 489
           + VC EAGM A+RA+R  +I EDF+  +  +   KKM  N
Sbjct: 346 RNVCSEAGMFAIRAERDYIIEEDFLKAVRKLAENKKMEGN 385

dbj|BAC34376.1| unnamed protein product [Mus musculus]
(418 aa)

Score: 283 bits (723), Expect: 1.07995e-74
Length: 316, Idn/Pos/Gap = 146/207/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD     
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDGQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + ++C E+GM A+R +R +V+ +DF  
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417

ref|XP_519288.1| PREDICTED: similar to proteasome 26S ATPase subunit 2; proteasome 26S subunit, ATPase, 2; mammalian suppressor of sgv-1 of yeast; protease 26S subunit 7 [Pan troglodytes]
(433 aa)

Score: 283 bits (723), Expect: 1.089e-74
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 IATEKDFLEAVNKV 416

gb|AAB24841.1| Tat binding protein 7, TBP-7=transcriptional activator [human, Peptide, 458 aa]
(458 aa)

Score: 283 bits (723), Expect: 1.12596e-74
Length: 298, Idn/Pos/Gap = 143/203/0 (47%/68%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 102 IVGSTTGSNYYVRILSAIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
             I    + KMN+  +V  E+     D  + A + ++C E+GM A+R +R +V+ +DF
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399

ref|XP_533670.1| PREDICTED: similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7) [Canis familiaris]
gb|AAP35896.1| proteasome (prosome, macropain) 26S subunit, ATPase, 4 [Homo sapiens]
gb|AAX41690.1| proteasome 26S subunit 4 [synthetic construct]
gb|AAH14488.1| Proteasome 26S ATPase subunit 4, isoform 1 [Homo sapiens]
gb|AAH00343.1| Proteasome 26S ATPase subunit 4, isoform 1 [Homo sapiens]
gb|AAC26843.1| 26S proteasome ATPase subunit [Homo sapiens]
sp|P43686|PRS6B_HUMAN 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7)
gb|AAD39267.1| ATPase homolog [Homo sapiens]; MIP22; TAT-BINDING PROTEIN-7; TBP-7; 26S PROTEASE REGULATORY SUBUNIT 6B
gb|AAC99817.1| MIP224 [Homo sapiens]
ref|NP_006494.1| proteasome 26S ATPase subunit 4 isoform 1 [Homo sapiens]
(418 aa)

Score: 283 bits (723), Expect: 1.1545e-74
Length: 316, Idn/Pos/Gap = 146/208/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + ++C E+GM A+R +R +V+ +DF  
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417

gb|EAA22299.1| 26S proteasome subunit P45 family, putative [Plasmodium yoelii yoelii]
(475 aa)

Score: 283 bits (723), Expect: 1.16417e-74
Length: 315, Idn/Pos/Gap = 147/199/2 (46%/63%/0%)

Query: 166 SDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARV 225
           SD +Q    + VK   +  V L     V  S++  G  VGV++  Y I   LP + D  V
Sbjct: 121 SDTDQTKYIINVKQIAKFVVGLGEK--VAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSV 178

Query: 226 KAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTG 285
               V+E+P   + DIGG  +Q+E++ E V +P+     F  +GI PPKGVL+YGPPGTG
Sbjct: 179 TMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTG 238

Query: 286 KTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIG 345
           KTL ARA A +T A F+ + G+ LVQ ++G+GARLVR+ F +AK K   I+FIDE+DAIG
Sbjct: 239 KTLTARAIANRTDACFICVIGSELVQKYVGEGARLVRELFQMAKSKKACILFIDEVDAIG 298

Query: 346 TKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKI 405
             R D    GD E QRTMLE++NQLDGFD   +++V+ ATNRPD LD+AL+R GR+DRKI
Sbjct: 299 GSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVIMATNRPDTLDSALVRPGRIDRKI 358

Query: 406 EFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADR 465
           EF  PD   R  I +IH+  MN+  DV +E LAR   +   + +++VC EAGM A+RA R
Sbjct: 359 EFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARR 418

Query: 466 KVVIHEDFIDGIAAV 480
           K +  +D +  I  V
Sbjct: 419 KTITEKDLLLAINKV 433

gb|AAB42248.2| Hypothetical protein C10G11.8 [Caenorhabditis elegans]
ref|NP_491811.1| ATPase 1, possibly N-myristoylated (48.6 kD) (1G848) [Caenorhabditis elegans]
(438 aa)

Score: 283 bits (723), Expect: 1.17392e-74
Length: 323, Idn/Pos/Gap = 155/209/6 (47%/64%/1%)

Query: 169 NQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYL------ILEKLPEEYD 222
           + +  AVVV   +R+  ++PI  +VD   LR   LV V            I+  L ++ D
Sbjct: 107 DDEKHAVVVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKID 166

Query: 223 ARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPP 282
           +     +V++ P E F DIGG + QI+E+ E+V LP+TH   +E +GI  PKGV++YG P
Sbjct: 167 SNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEP 226

Query: 283 GTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD 342
           GTGKTLLA+A A  T ATF++  G+ LVQ   G+GARLVR  F +AK++APSI+FIDE+D
Sbjct: 227 GTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEID 286

Query: 343 AIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLD 402
           A+GTKRFD+   G++E QRT+LELLNQLDGF+   DV+++ ATNR D LD AL+R GR+D
Sbjct: 287 AVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRID 346

Query: 403 RKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           RKIE P PDE  R +I  IH+  M +   V+YE +       + A +KAVC EAGM ALR
Sbjct: 347 RKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALR 406

Query: 463 ADRKVVIHEDFIDGIAAVQAKKK 485
           A RK V  +DF   + +V   KK
Sbjct: 407 AQRKCVGTDDFEKAVKSVMLSKK 429

pir||S51042 tat-binding protein homolog - malaria parasite (Plasmodium falciparum)
(435 aa)

Score: 283 bits (723), Expect: 1.18376e-74
Length: 317, Idn/Pos/Gap = 148/214/4 (46%/67%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK +      + I   +++S   P   V +  DSY + + LP + D  V   +V++ P
Sbjct: 115 VLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVP 174

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD+Q++EV E + LP+ H  +FE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 175 DSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG++R + +  
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEH- 293

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTM+ELLNQLDGF+   +++V+  TNR DILD AL+R GR+DRKIEFP+P+  A
Sbjct: 294 GDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEA 353

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRK+N+   +   ++A   ++ + A +KAVC EAGM ALR  R  V  EDF 
Sbjct: 354 RMEILKIHSRKINLMRGIDMLKIATHMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 413

Query: 475 DGIAAV---QAKKKMSL 488
             +A V    A+K  +L
Sbjct: 414 MAVAKVMKQDAEKNFTL 430

gb|AAX80364.1| proteasome regulatory ATPase subunit 3 [Trypanosoma brucei]
gb|AAF91245.1| proteasome regulatory ATPase subunit 3 [Trypanosoma brucei]
(403 aa)

Score: 283 bits (723), Expect: 1.23419e-74
Length: 329, Idn/Pos/Gap = 144/212/13 (43%/64%/3%)

Query: 157 EEDEGAAQESDANQQSPAV-------------VVKTSTRQTVFLPIPGLVDVSELRPGDL 203
           +E+  A QE    Q  P V             +V  S+    ++ I   +D  +L+PG  
Sbjct:  54 KEESAAKQEVKRIQAVPLVLGTFVEAVEAGRGIVGGSSSSNYYVRILSTLDKEKLKPGAS 113

Query: 204 VGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKH 263
           VG++K S   ++ LP E D+ V     ++RP   ++D+GGLD Q +E+ EAV LP+TH  
Sbjct: 114 VGLHKGSNSCVQILPNEIDSAVHVLRKEDRPNVTYSDVGGLDMQKQEIREAVELPLTHAS 173

Query: 264 LFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRD 323
           L++++GI PP+GVL+YGPPGTGKT+L +A A  T A F+ + G+  VQ ++G+G R VRD
Sbjct: 174 LYDQIGIDPPRGVLLYGPPGTGKTMLVKAVAHHTNAAFISVVGSEFVQKYLGEGPRKVRD 233

Query: 324 AFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLA 383
            F LA++ AP+IIFIDE+D+I TKRFD+    DRE QR ++ELL Q+DGFDQ  +V+V+ 
Sbjct: 234 VFRLARENAPAIIFIDEVDSIATKRFDAQTGADREVQRVLIELLAQMDGFDQTTNVKVIM 293

Query: 384 ATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDD 443
           ATNR D LD A++R GRLDRKIEFP+PD   +  + ++ + +MN+ P+V  EE     + 
Sbjct: 294 ATNRWDTLDPAILRPGRLDRKIEFPYPDRRQKRLVFQVCTSRMNLSPEVDLEEFVTRPER 353

Query: 444 FNAAMLKAVCVEAGMAALRADRKVVIHED 472
              A ++++C EAGM A+R +R VV+ +D
Sbjct: 354 LTGADIQSICHEAGMLAVRKNRYVVLPKD 382

gb|EAL18590.1| hypothetical protein CNBJ0160 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW45892.1| ATPase, putative [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_567409.1| ATPase, putative [Cryptococcus neoformans var. neoformans JEC21]
(405 aa)

Score: 282 bits (722), Expect: 1.28677e-74
Length: 342, Idn/Pos/Gap = 152/212/7 (44%/61%/2%)

Query: 151 DDLDDAEEDEGAAQ-------ESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDL 203
           +D D  E+D  A Q       E          +VK S+     +     + V +L+P   
Sbjct:  54 NDYDKTEDDIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYVVSYRPTLPVHKLKPTTR 113

Query: 204 VGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKH 263
           V ++  +  I+  LP E D  V    +++  +  FA IGGL +Q+ E+ E + LP+ +  
Sbjct: 114 VSLDMTTLTIMRILPREVDPMVYNMSLEDPGSASFAGIGGLGEQVRELREVIELPLMNPE 173

Query: 264 LFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRD 323
           LFERVGI PPKGVL+YGPPGTGKTLLARA AA     FLK+  +++V  +IG+ ARL+R+
Sbjct: 174 LFERVGINPPKGVLLYGPPGTGKTLLARAVAATLNTNFLKVVSSAIVDKYIGESARLIRE 233

Query: 324 AFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLA 383
            FA A++  P +IF+DE+DAIG +RF    S DRE QRT++ELLNQ+DGF+     +++ 
Sbjct: 234 MFAYAREHEPCVIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQMDGFESLGRTKIIM 293

Query: 384 ATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDD 443
           ATNRPD LD AL+R GRLDRKIE P P+E  R  IL+IH++K+N   D+ YE + + +D 
Sbjct: 294 ATNRPDTLDPALLRPGRLDRKIEIPLPNEQGRLEILKIHAKKVNKSGDIDYEAIVKLSDG 353

Query: 444 FNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKK 485
           FN A L+ VC EAGM A+R DR  V+ EDF+  +  +   KK
Sbjct: 354 FNGADLRNVCTEAGMFAIRDDRDAVVQEDFMKAVRKLNEAKK 395

emb|CAH91973.1| hypothetical protein [Pongo pygmaeus]
(433 aa)

Score: 282 bits (722), Expect: 1.36416e-74
Length: 313, Idn/Pos/Gap = 145/205/0 (46%/65%/0%)

Query: 168 ANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKA 227
           A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V  
Sbjct: 104 ADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTM 163

Query: 228 FEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKT 287
            +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223

Query: 288 LLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTK 347
           L ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG  
Sbjct: 224 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283

Query: 348 RFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEF 407
           RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIEF
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF 343

Query: 408 PHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKV 467
             PD   R  IL+IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK+
Sbjct: 344 SLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403

Query: 468 VIHEDFIDGIAAV 480
              +DF++ +  V
Sbjct: 404 ATEKDFLEAVNKV 416

gb|EAL24412.1| proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Homo sapiens]
ref|NP_001015639.1| proteasome (prosome, macropain) 26S subunit, ATPase 2 [Bos taurus]
gb|AAH02589.1| Proteasome 26S ATPase subunit 2 [Homo sapiens]
dbj|BAA01868.1| mammalian suppressor of sgv1 [Homo sapiens]
gb|AAX08978.1| proteasome 26S ATPase subunit 2 [Bos taurus]
sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 (MSS1 protein)
prf||1813280A tat-mediated transactivation modulator
ref|NP_002794.1| proteasome 26S ATPase subunit 2 [Homo sapiens]
(433 aa)

Score: 282 bits (722), Expect: 1.58522e-74
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 IATEKDFLEAVNKV 416

gb|EAK89665.1| 26S proteasome regulatory subunit S10b like AAA+ ATpase [Cryptosporidium parvum]
(406 aa)

Score: 282 bits (722), Expect: 1.62541e-74
Length: 314, Idn/Pos/Gap = 143/207/0 (45%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK ST     +     +D S+L  G  V ++  +  I+ +LP E D  V     ++  +
Sbjct:  87 IVKASTGPRYVVGCRSKLDKSKLTSGTRVALDATTLTIMRRLPREVDPMVYNMLHEDPGS 146

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++ +GGL++QI E+ E + LP+T+  LF+RVGIK PKGVL+YGPPGTGKTLLARA A+
Sbjct: 147 VSYSQVGGLNEQIREIREVIELPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 206

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
                F+K+  +++V  +IG+ AR++R+ F  AK   P +IF+DE+DAIG KRF    S 
Sbjct: 207 SMNCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPCVIFMDEIDAIGGKRFSQGTSA 266

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELLNQLDGFD+   V+++ ATNRPD+LD AL+R GRLDRK+E P P+E +R
Sbjct: 267 DREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALLRPGRLDRKVEIPLPNETSR 326

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             IL+IHS K+    ++ ++ + +  D FN A ++ VC EAGM A+RA+R  +I EDF+ 
Sbjct: 327 VEILKIHSSKLAKQGEIDFDAICKLCDGFNGADMRNVCSEAGMFAIRAERDYIIEEDFLK 386

Query: 476 GIAAVQAKKKMSLN 489
            +  +   KKM  N
Sbjct: 387 AVRKLAENKKMEGN 400

gb|AAS21759.1| 26S proteasome regulatory complex ATPase RPT3 [Zea mays]
(348 aa)

Score: 282 bits (721), Expect: 1.69465e-74
Length: 341, Idn/Pos/Gap = 147/214/13 (43%/62%/3%)

Query: 164 QESDANQQSPAVV-------------VKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDS 210
           QE   NQ  P V+             V ++T    ++ I   ++   L+P   V +++ S
Sbjct:   7 QEEYVNQSVPLVIGQFMEMVDGNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHS  66

Query: 211 YLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGI 270
             +++ LP E D+ +      E+P   + DIGG D Q +E+ EAV LP+TH  L++++GI
Sbjct:  67 NALVDVLPPEADSSISLLGSSEKPNVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGI 126

Query: 271 KPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKK 330
            PP+GVL+YGPPGTGKT+LA+A A  T A F+++ G+  VQ ++G+G R+VRD F LAK+
Sbjct: 127 DPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEGVQKYLGEGPRMVRDVFRLAKE 186

Query: 331 KAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDI 390
            AP+IIFIDE+DAI T RFD+    DRE QR ++ELLNQ+DGFDQ  +V+V+ ATNR D 
Sbjct: 187 NAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADT 246

Query: 391 LDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLK 450
           LD AL+R GRLDRKIEFP PD   +  + ++ + KMN+  +V  E+     D  +AA + 
Sbjct: 247 LDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADIA 306

Query: 451 AVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYY 491
           A+C EAGM A+R +R V++ +DF  G      K +   ++Y
Sbjct: 307 AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPETDFDFY 347

gb|AAV31414.1| 26S protease regulatory subunit-like protein [Toxoptera citricida]
(437 aa)

Score: 282 bits (721), Expect: 1.76684e-74
Length: 314, Idn/Pos/Gap = 143/203/0 (45%/64%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+   P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 107 NADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 166

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QI+++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 167 MMQVEEKPDVTYSDVGGCKEQIDKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGK 226

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 227 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGG 286

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRK+E
Sbjct: 287 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVE 346

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I  IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 347 FGLPDLEGRTHIFNIHARAMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 406

Query: 467 VVIHEDFIDGIAAV 480
           V   +DF++ +  V
Sbjct: 407 VATEKDFLEAVNKV 420

gb|EAL18325.1| hypothetical protein CNBJ2480 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW45962.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_567479.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
(407 aa)

Score: 282 bits (721), Expect: 1.90463e-74
Length: 301, Idn/Pos/Gap = 149/206/4 (49%/68%/1%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           + +S L P   V +  DSYL+   LP + D  V    V++ P   +  +GGLDKQI+E+ 
Sbjct: 103 IPISALTPNIRVSLRADSYLLHSILPNKIDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIK 162

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A  T   F++++G+ LVQ 
Sbjct: 163 EVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQK 222

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD-SDRSGDRETQRTMLELLNQLD 371
           +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG  R + + +SGD E QRTM+ELLNQLD
Sbjct: 223 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGGSRGEGAGKSGDSEVQRTMMELLNQLD 282

Query: 372 GFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPD 431
           GF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+  AR  IL+IHSRKM++   
Sbjct: 283 GFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNPEARITILKIHSRKMSLQRG 342

Query: 432 VSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV---QAKKKMSL 488
           +++  LA    + + A ++ +C EAGM ALR  R+ V  EDF   IA V    A   MS+
Sbjct: 343 INFRSLAEKMGNCSGAEVRGICTEAGMYALRERRQYVGQEDFEMAIAKVLKKNADNNMSV 402

Query: 489 N 489
           N
Sbjct: 403 N 403

gb|AAH05462.1| Psmc2 protein [Mus musculus]
sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 (MSS1 protein)
dbj|BAB23807.1| unnamed protein product [Mus musculus]
(433 aa)

Score: 282 bits (721), Expect: 2.10521e-74
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 IATEKDFLEAVNKV 416

gb|AAH60362.1| MGC68784 protein [Xenopus laevis]
(420 aa)

Score: 281 bits (720), Expect: 2.2884e-74
Length: 316, Idn/Pos/Gap = 145/207/0 (45%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 104 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSITMLTADQKPD 163

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 164 VLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 223

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 224 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 283

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 284 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 343

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    +  MN+  +V  E+     D  + A + ++C EAGM A+R +R +V+ +DF  
Sbjct: 344 RLIFSTITSNMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEK 403

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 404 AYKTVIKKDEQEHEFY 419

gb|EAL25952.1| GA12266-PA [Drosophila pseudoobscura]
(433 aa)

Score: 281 bits (720), Expect: 2.3464e-74
Length: 314, Idn/Pos/Gap = 142/206/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+   P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSDDPKYIINVKQFAKFVVDLADSVATTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+++P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRK+E
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD+  R+ I +IH+R M+V  D+ ++ LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           V   +DF++ +  V
Sbjct: 403 VATEKDFLEAVNKV 416

emb|CAD98640.1| 26s protease regulatory subunit 8, probable [Cryptosporidium parvum]
(393 aa)

Score: 281 bits (720), Expect: 2.40588e-74
Length: 309, Idn/Pos/Gap = 146/210/1 (47%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK +      + +   +D+S+      V +  DS+ +    P + D  V   +V++ P
Sbjct:  73 VLVKLNPEGKFLVDVSKNIDISKCTTNTRVALLSDSFKLHRIFPNKVDPLVSLMKVEKVP 132

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD+QI+E+ E + LP+ H  +FE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 133 DSTYDMVGGLDEQIKEIKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKTLLARAVA 192

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APS+IF+DE+D+IG++R + + S
Sbjct: 193 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSLIFMDEIDSIGSQRTEGE-S 251

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++++ ATNR DILD AL+R GR+DRKIEFP+P+E A
Sbjct: 252 GDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDDALLRPGRIDRKIEFPNPNEDA 311

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSRKMN+   +   ++A+     + A  KAVC EAGM ALR  RK V  EDF 
Sbjct: 312 RLEILKIHSRKMNLVRGIDLRKVAQQMQGASGAESKAVCTEAGMFALRERRKHVTQEDFD 371

Query: 475 DGIAAVQAK 483
             ++ V  K
Sbjct: 372 MAVSRVMKK 380

gb|AAH61542.1| Proteasome (prosome, macropain) 26S subunit, ATPase 2 [Rattus norvegicus]
(433 aa)

Score: 281 bits (720), Expect: 2.44636e-74
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARAMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 IATEKDFLEAVNKV 416

gb|AAW26616.1| unknown [Schistosoma japonicum]
(433 aa)

Score: 281 bits (720), Expect: 2.57195e-74
Length: 314, Idn/Pos/Gap = 141/205/0 (44%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +++ + P  ++         + +   V  +++  G  VGV++  Y I   LP + D  V 
Sbjct: 103 NSDNEEPKYIINVKQFAKFVVDLADTVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+++P   ++D+GG  +QIE++ E V LP+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEDKPDVTYSDVGGCKEQIEKLREVVELPLLHPEKFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F LA+ K   IIF DE+DA+G 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIDAVGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    G+ E QRTMLEL+NQLDGFD   +++VL ATNRPD LD AL+R GRLDRK+E
Sbjct: 283 ARFDDGLGGENEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ YE LAR   +   A +++VC EAGM A+R+ RK
Sbjct: 343 FGLPDLEGRTHIFKIHARSMSVEKDIRYELLARLCPNSTGAEIRSVCTEAGMYAIRSRRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 MATEKDFLEAVNKV 416

gb|AAH83283.1| 26S protease regulatory subunit S10B [Danio rerio]
gb|AAT68145.1| 26S protease regulatory subunit S10B [Danio rerio]
emb|CAH69094.1| novel protein similar to X. tropicalis proteasome 26S ATPase subunit 6 [Danio rerio]
ref|NP_001003832.1| 26S protease regulatory subunit S10B [Danio rerio]
(389 aa)

Score: 281 bits (720), Expect: 2.72664e-74
Length: 294, Idn/Pos/Gap = 145/197/0 (49%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++  +  +++IGGL +QI E+ 
Sbjct:  87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 266

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IHS  +  H D+
Sbjct: 267 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDI 326

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD + V  EDF+  +  V   KK+
Sbjct: 327 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKL 380

gb|EAA05145.2| ENSANGP00000021987 [Anopheles gambiae str. PEST]
ref|XP_309476.2| ENSANGP00000021987 [Anopheles gambiae str. PEST]
(434 aa)

Score: 281 bits (720), Expect: 2.74949e-74
Length: 314, Idn/Pos/Gap = 144/204/0 (45%/64%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+   P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 104 NADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 163

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 164 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGK 223

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 224 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGG 283

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRK+E
Sbjct: 284 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVE 343

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 344 FGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 403

Query: 467 VVIHEDFIDGIAAV 480
           V   +DF++ +  V
Sbjct: 404 VATEKDFLEAVNKV 417

gb|AAB01762.1| Tat-binding protein homolog
sp|Q25544|PRS8_NAEFO 26S protease regulatory subunit 8 homolog (TAT-binding protein homolog)
(414 aa)

Score: 281 bits (720), Expect: 2.79575e-74
Length: 335, Idn/Pos/Gap = 149/217/1 (44%/64%/0%)

Query: 150 EDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           +++L   +E      E         V++K S      + I   +++ +L PG  V +  D
Sbjct:  67 KEELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRND 126

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           SY + + LP + D  V   +V++ P   +  +GGLD+QI+E+ E + LP+ H  LFE +G
Sbjct: 127 SYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLG 186

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
           I  PKGV+MYGPPGTGKTLLARA A  T  TF++++G+ LVQ +IG+G+++VR+ F +A+
Sbjct: 187 IAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAR 246

Query: 330 KKAPSIIFIDELDAIGTKRFDSDR-SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRP 388
           + APSIIF+DE+D+IG+ R +  +  GD E QRTMLELLNQLDGF+   +++++ ATNR 
Sbjct: 247 EHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRI 306

Query: 389 DILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAM 448
           DILD AL+R GR+DRKIEFP+P+E AR  IL+IHSR+MN+   ++  ++A      + A 
Sbjct: 307 DILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAE 366

Query: 449 LKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAK 483
           +KA C EAGM ALR  R  V  ED    +A V  +
Sbjct: 367 IKATCTEAGMFALRERRVHVTQEDLEMAVAKVMKR 401

sp|Q9HRW6|PSR2_HALN1 Proteasome-activating nucleotidase 2 (Proteasome regulatory subunit 2)
(407 aa)

Score: 281 bits (719), Expect: 3.14217e-74
Length: 315, Idn/Pos/Gap = 158/207/14 (50%/65%/4%)

Query: 159 DEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLP 218
           DEGA  +   N Q     V    R T             L PG  V VN +S  ++ +L 
Sbjct:  83 DEGAVIKQHGNNQEALTEVTDELRAT-------------LEPGSRVAVN-NSLSVVRQLD 128

Query: 219 EEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLM 278
           +E D R +  EVD+ P   + DIGGLD Q+ EV E V LPM    LFE VGI PP GVL+
Sbjct: 129 DEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLL 188

Query: 279 YGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFI 338
           +GPPGTGKTL+A+A A+QT A+F+K+AG+ LV  FIG+GA+LVRD F +A+   P+++FI
Sbjct: 189 HGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFI 248

Query: 339 DELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRS 398
           DE+DAI +KR DS  SGD E QRTM++LL+++DGFD+  D+R++AATNR D+LD A++R 
Sbjct: 249 DEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRP 308

Query: 399 GRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGM 458
           GR DR IE PHP+   R +I RIH+R MNV   V + ELA  T D + A +KA+C EAGM
Sbjct: 309 GRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGM 368

Query: 459 AALRADRKVVIHEDF 473
            A+R DR  V  +DF
Sbjct: 369 FAIRDDRTEVRMQDF 383

gb|AAH80888.1| Rpt3-prov protein [Xenopus tropicalis]
ref|NP_001008010.1| rpt3-prov protein [Xenopus tropicalis]
(420 aa)

Score: 281 bits (719), Expect: 3.19505e-74
Length: 316, Idn/Pos/Gap = 145/207/0 (45%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 104 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 163

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 164 VLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 223

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 224 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 283

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 284 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 343

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + ++C E GM A+R +R +V+ +DF  
Sbjct: 344 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAKDFEK 403

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 404 AYKTVIKKDEQEHEFY 419

gb|AAH92265.1| Proteasome 26S  ATPase subunit 4 [Mus musculus]
(418 aa)

Score: 281 bits (719), Expect: 3.38721e-74
Length: 316, Idn/Pos/Gap = 146/207/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
              ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 162 VMHADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + ++C E+GM A+R +R +V+ +DF  
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417

ref|NP_150239.1| proteasome (prosome, macropain) 26S subunit, ATPase 2 [Rattus norvegicus]
sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 (MSS1 protein)
dbj|BAA09339.1| proteasomal ATPase (MSS1) [Rattus norvegicus]
(433 aa)

Score: 281 bits (718), Expect: 3.74392e-74
Length: 314, Idn/Pos/Gap = 144/204/0 (45%/64%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+ + G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 403 IATEKDFLEAVNKV 416

dbj|BAB78494.1| 26S proteasome regulatory particle triple-A ATPase subunit3 [Oryza sativa (japonica cultivar-group)]
(368 aa)

Score: 281 bits (718), Expect: 3.90341e-74
Length: 316, Idn/Pos/Gap = 141/208/0 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   ++   L+P   V +++ S  +++ LP E D+ +      E+P 
Sbjct:  52 IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPN 111

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             + DIGG D Q +E+ EAV LP+TH  L++++GI PP+GVL+YGPPGTGKT+LA+A A 
Sbjct: 112 VTYTDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 171

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI T RFD+    
Sbjct: 172 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 231

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR ++ELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 232 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 291

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             + ++ + KMN+  +V  E+     D  +AA + A+C EAGM A+R +R V++ +DF  
Sbjct: 292 RLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEK 351

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K +   ++Y
Sbjct: 352 GYRTNVKKPETDFDFY 367

gb|AAG30017.1| TAT-binding protein 1; 26S protein [Oncorhynchus mykiss]
(194 aa)

Score: 281 bits (718), Expect: 4.13819e-74
Length: 190, Idn/Pos/Gap = 148/164/0 (77%/86%/0%)

Query: 291 RACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD 350
           RA AAQTKATFLKLAG  LVQMFIGDGA+LVRDAFALAK+KAPSIIFIDELDAIGTKRFD
Sbjct:   5 RAXAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD  64

Query: 351 SDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHP 410
           S+++GDRE QRTMLELLNQLDGF  N  V+V+AATNR DILD AL+RSGRLDRKIEFP P
Sbjct:  65 SEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 124

Query: 411 DEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIH 470
           +E ARARI++IHSRKMNV PDV+YEELAR TDDFN A  KAVCVEAGM ALR     + H
Sbjct: 125 NEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNH 184

Query: 471 EDFIDGIAAV 480
           ED+++GI  V
Sbjct: 185 EDYMEGILEV 194

ref|NP_477473.1| CG1341-PA [Drosophila melanogaster]
gb|AAF59219.1| CG1341-PA [Drosophila melanogaster]
gb|AAL29154.1| SD07148p [Drosophila melanogaster]
gb|AAF08388.1| 26S proteasome regulatory complex subunit p48B [Drosophila melanogaster]
(433 aa)

Score: 281 bits (718), Expect: 4.49828e-74
Length: 314, Idn/Pos/Gap = 142/206/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+   P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+++P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGG 282

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRK+E
Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVE 342

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD+  R+ I +IH+R M+V  D+ ++ LAR   +   A +++VC EAGM A+RA RK
Sbjct: 343 FGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRK 402

Query: 467 VVIHEDFIDGIAAV 480
           V   +DF++ +  V
Sbjct: 403 VATEKDFLEAVKKV 416

gb|AAC32612.1| ATPase homolog [Homo sapiens]
(418 aa)

Score: 280 bits (717), Expect: 4.80879e-74
Length: 316, Idn/Pos/Gap = 145/208/0 (45%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T  + ++ I   +D   L+P   V ++K S  +++ LP E D+ +      ++P 
Sbjct: 102 IVGSTTGSSYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSGQKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPVTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I    + KMN+  +V  E+     D  + A + ++C E+GM A+R +R +V+ +DF  
Sbjct: 342 RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417

ref|XP_465282.1| putative 26S proteasome regulatory particle triple-A ATPase subunit3 [Oryza sativa (japonica cultivar-group)]
dbj|BAD15686.1| putative 26S proteasome regulatory particle triple-A ATPase subunit3 [Oryza sativa (japonica cultivar-group)]
(419 aa)

Score: 280 bits (717), Expect: 5.54163e-74
Length: 316, Idn/Pos/Gap = 141/208/0 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   ++   L+P   V +++ S  +++ LP E D+ +      E+P 
Sbjct: 103 IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPN 162

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             + DIGG D Q +E+ EAV LP+TH  L++++GI PP+GVL+YGPPGTGKT+LA+A A 
Sbjct: 163 VTYTDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 222

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI T RFD+    
Sbjct: 223 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 282

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR ++ELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 283 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 342

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             + ++ + KMN+  +V  E+     D  +AA + A+C EAGM A+R +R V++ +DF  
Sbjct: 343 RLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEK 402

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K +   ++Y
Sbjct: 403 GYRTNVKKPETDFDFY 418

dbj|BAD36121.1| putative 26S proteasome regulatory particle triple-A ATPase subunit4 [Oryza sativa (japonica cultivar-group)]
dbj|BAD35613.1| putative 26S proteasome regulatory particle triple-A ATPase subunit4 [Oryza sativa (japonica cultivar-group)]
(401 aa)

Score: 280 bits (717), Expect: 5.92416e-74
Length: 350, Idn/Pos/Gap = 152/220/14 (43%/62%/4%)

Query: 151 DDLDDAEEDEGAAQESDANQQSPA--------------VVVKTSTRQTVFLPIPGLVDVS 196
           D+L +A++D G  ++   + QS                 +VK S+     +     VD  
Sbjct:  39 DNLKNAKKDFGKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKE  98

Query: 197 ELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVV 256
           +L  G  V ++  +  I+  LP E D  V     ++     ++ +GGL  QI E+ E++ 
Sbjct:  99 KLIAGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIE 158

Query: 257 LPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGD 316
           LP+ +  LF RVGIKPPKGVL+YGPPGTGKTLLARA A+   A FLK+  ++++  +IG+
Sbjct: 159 LPLMNPKLFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGE 218

Query: 317 GARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQN 376
            ARL+R+ F+ A++  P IIF+DE+DAIG +RF    S DRE QRT++ELLNQLDGFD+ 
Sbjct: 219 SARLIREMFSYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDEL 278

Query: 377 DDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEE 436
             V+++ ATNRPD+LD AL+R GRLDRKIE P P+E +R  +L+IH+  +  H ++ YE 
Sbjct: 279 GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEVLKIHAAGIAKHGEIDYEA 338

Query: 437 LARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           + +  + FN A L+ VC EAGMAA+RA+R  VIHEDF+  +  +   KK+
Sbjct: 339 VVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKL 388

gb|EAA67531.1| hypothetical protein FG01605.1 [Gibberella zeae PH-1]
ref|XP_381781.1| hypothetical protein FG01605.1 [Gibberella zeae PH-1]
(389 aa)

Score: 280 bits (716), Expect: 6.43966e-74
Length: 278, Idn/Pos/Gap = 145/192/0 (52%/69%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           ++L PG  V +  DSY + + LP   D  V    V++ P   +  IGGLD+QI+E+ E +
Sbjct:  89 AKLTPGKRVTLLSDSYKLEKMLPSSVDPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVI 148

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            L + H  LFE +GI  PKGVL+YGPPGTGKTLLARA A  T   F++++G+ LVQ +IG
Sbjct: 149 ELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTACKFIRVSGSELVQKYIG 208

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    GD E QRTMLELLNQLDGF+ 
Sbjct: 209 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEP 268

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++V+ ATNR DILD AL+R GR+DRKIEFP P   ARA ILRIHSRKMN+   ++  
Sbjct: 269 TKNIKVIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILRIHSRKMNLTRGINLT 328

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           ++A   +  + A LK VC EAGM ALR  R  V  EDF
Sbjct: 329 KIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDF 366

dbj|BAB78495.1| 26S proteasome regulatory particle triple-A ATPase subunit4b [Oryza sativa (japonica cultivar-group)]
(377 aa)

Score: 280 bits (716), Expect: 6.94186e-74
Length: 350, Idn/Pos/Gap = 152/220/14 (43%/62%/4%)

Query: 151 DDLDDAEEDEGAAQESDANQQSPA--------------VVVKTSTRQTVFLPIPGLVDVS 196
           D+L +A++D G  ++   + QS                 +VK S+     +     VD  
Sbjct:  15 DNLKNAKKDFGKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKE  74

Query: 197 ELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVV 256
           +L  G  V ++  +  I+  LP E D  V     ++     ++ +GGL  QI E+ E++ 
Sbjct:  75 KLIAGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIE 134

Query: 257 LPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGD 316
           LP+ +  LF RVGIKPPKGVL+YGPPGTGKTLLARA A+   A FLK+  ++++  +IG+
Sbjct: 135 LPLMNPKLFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGE 194

Query: 317 GARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQN 376
            ARL+R+ F+ A++  P IIF+DE+DAIG +RF    S DRE QRT++ELLNQLDGFD+ 
Sbjct: 195 SARLIREMFSYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDEL 254

Query: 377 DDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEE 436
             V+++ ATNRPD+LD AL+R GRLDRKIE P P+E +R  +L+IH+  +  H ++ YE 
Sbjct: 255 GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEVLKIHAAGIAKHGEIDYEA 314

Query: 437 LARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           + +  + FN A L+ VC EAGMAA+RA+R  VIHEDF+  +  +   KK+
Sbjct: 315 VVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKL 364

ref|NP_142199.1| 26S protease regulatory subunit [Pyrococcus horikoshii OT3]
dbj|BAA29270.1| 399aa long hypothetical 26S protease regulatory subunit [Pyrococcus horikoshii OT3]
sp|O57940|PSMR_PYRHO Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(399 aa)

Score: 280 bits (716), Expect: 7.35938e-74
Length: 296, Idn/Pos/Gap = 148/201/1 (50%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D  +LRPG  V +++ +  ++E LP   D  V  FEV ERP   + DIGGL KQ++E+ 
Sbjct:  94 IDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELR 153

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           EA+ LP+ H  LFE VGI PPKGVL+YGPPG GKTL+A+A A +  ATF+++ G+ LV+ 
Sbjct: 154 EAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRK 213

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+GARLV + F LAK+KAP+IIFIDE+DAIG KR D    G+RE  RT+++LL ++DG
Sbjct: 214 YIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDG 273

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +V+V+AATNRPDILD AL+R GR DR IE P PD   R  IL++H+R+M +   V
Sbjct: 274 FDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK-GV 332

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSL 488
               +A  T+  + A LKA+  EAGM A+R  R  V  EDF+  +  V   ++  L
Sbjct: 333 DLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKLL 388

emb|CAB49111.1| 26S protease regulatory subunit 4 [Pyrococcus abyssi GE5]
ref|NP_125880.1| 26S protease regulatory subunit 4 [Pyrococcus abyssi GE5]
pir||H75207 26s proteinase regulatory chain 4 PAB2233 - Pyrococcus abyssi (strain Orsay)
sp|Q9V287|PSMR_PYRAB Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(399 aa)

Score: 280 bits (716), Expect: 7.54592e-74
Length: 296, Idn/Pos/Gap = 148/202/1 (50%/68%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           ++  +LRPG  V +++ +  I+E LP   D  V  FEV ERP   + DIGGL KQ++E+ 
Sbjct:  94 IERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELR 153

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           EA+ LP+ H  LFE VGI PPKGVL+YGPPG GKTL+A+A A +  ATF+++ G+ LV+ 
Sbjct: 154 EAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRK 213

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+GARLV + F LAK+KAP+IIFIDE+DAIG KR D    G+RE  RT+++LL ++DG
Sbjct: 214 YIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDG 273

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +V+V+AATNRPDILD AL+R GR DR IE P PD   R  IL++H+R+M +  +V
Sbjct: 274 FDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK-NV 332

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSL 488
               +A  T+  + A LKA+  EAGM A+R  R  V  EDF+  +  V   ++  L
Sbjct: 333 DLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKLL 388

sp|Q8PY58|PSMR_METMA Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(420 aa)

Score: 280 bits (716), Expect: 7.80202e-74
Length: 306, Idn/Pos/Gap = 143/213/0 (46%/69%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           ++V++S      + +   +D  +L PG  V +N+ +  I E +P   +  V A EV E  
Sbjct:  95 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESV 154

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
             D+  IGGLD+QI+E+ EAV LP+T    F R+GI+PPKGVL+YG PGTGKTLLA+A A
Sbjct: 155 EVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVA 214

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T ATF+++ G+ LVQ +IGDG++LVR+ F +A+KKAPSIIFIDELD+I  +R +    
Sbjct: 215 HRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG 274

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
            DRE QRT+++LL ++DGFD+  ++R++AATNRPD+LD A++R GR DR +  P P   A
Sbjct: 275 ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEA 334

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL+IH  KM +  D+ +++LA++T+  + A LKA+  EAGM A+R D+++V  E+F+
Sbjct: 335 RGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFL 394

Query: 475 DGIAAV 480
           + +  V
Sbjct: 395 EAVEKV 400

ref|NP_035318.1| proteasome (prosome, macropain) 26S subunit, ATPase 2 [Mus musculus]
dbj|BAC36516.1| unnamed protein product [Mus musculus]
(475 aa)

Score: 280 bits (716), Expect: 7.80202e-74
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 145 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 204

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 205 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 264

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 265 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 324

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 325 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 384

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 385 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 444

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 445 IATEKDFLEAVNKV 458

gb|AAO92283.1| 26S proteasome regulatory subunit [Dermacentor variabilis]
(402 aa)

Score: 280 bits (715), Expect: 8.6959e-74
Length: 294, Idn/Pos/Gap = 143/200/0 (48%/68%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+PG  V ++  +  I+  LP E D  V     ++     ++ IGGL +QI E+ 
Sbjct: 100 LDKAKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNISYSMIGGLAEQIRELR 159

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q +A FLK+  +++V  
Sbjct: 160 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQIEANFLKVVSSAIVDK 219

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P +IF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 220 YIGESARLIREMFNYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 279

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  I++IH+  +  H +V
Sbjct: 280 FDSLGQVKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLDIVKIHATPITKHGEV 339

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            +E + + +D FN A L+ VC EAGM A+RADR+ VI EDF+  +  V   KK+
Sbjct: 340 DWEAVVKLSDGFNGADLRNVCTEAGMFAIRADREFVIEEDFMKAVRKVADNKKL 393

gb|AAH57997.1| Psmc6 protein [Mus musculus]
(382 aa)

Score: 280 bits (715), Expect: 8.76876e-74
Length: 294, Idn/Pos/Gap = 143/196/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  80 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 139

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 140 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 199

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 200 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 259

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 260 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 319

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 320 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 373

gb|EAL27734.1| GA21817-PA [Drosophila pseudoobscura]
(421 aa)

Score: 280 bits (715), Expect: 8.84223e-74
Length: 333, Idn/Pos/Gap = 143/207/17 (42%/62%/5%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ +   +D  +L+P   V ++K S  +++ +P E D+ +     DE+P 
Sbjct:  88 IVASTTGSNYYVRVLSTIDREQLKPSASVALHKQSNCLVDLVPPEADSTISMLSADEKPD 147

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG-----------------IKPPKGVLM 278
             ++DIGGLD Q +E+ EAV LP+TH HL++++G                 I PP+GVL+
Sbjct: 148 VSYSDIGGLDMQKQEIREAVELPLTHAHLYKQIGGYHNLFCRLTFELSTSGIDPPRGVLL 207

Query: 279 YGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFI 338
           YGPPG GKT+LA+A A  T A F+ + G+  VQ ++G+G R+VRD F LAK+  PS+IFI
Sbjct: 208 YGPPGCGKTMLAKAVAHHTTANFISVVGSEFVQKYLGEGPRMVRDLFRLAKQNCPSVIFI 267

Query: 339 DELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRS 398
           DE+DAI TKRFD+    DRE QR +LELLNQ+DGFD+  +V+V+ ATNR D LD AL+R 
Sbjct: 268 DEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNVKVIMATNRADTLDPALLRP 327

Query: 399 GRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGM 458
           GR+DRKIEFP PD   +  +    + KMN+  DV  E++    D  + A + A+C EAGM
Sbjct: 328 GRMDRKIEFPLPDRRQKRLVFTTITSKMNLGEDVDLEDIIARPDKISNADINAICQEAGM 387

Query: 459 AALRADRKVVIHEDFIDGIAAVQAKKKMSLNYY 491
            A+R +R VV  +D   G  A   K +    +Y
Sbjct: 388 HAVRENRYVVNAKDLEKGYKASVRKDEAQHEFY 420

emb|CAF93400.1| unnamed protein product [Tetraodon nigroviridis]
(434 aa)

Score: 280 bits (715), Expect: 9.14232e-74
Length: 315, Idn/Pos/Gap = 145/206/1 (46%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 103 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 162

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 163 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282

Query: 347 K-RFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKI 405
           K RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKI
Sbjct: 283 KSRFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 342

Query: 406 EFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADR 465
           EF  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA R
Sbjct: 343 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 402

Query: 466 KVVIHEDFIDGIAAV 480
           K+   +DF++ +  V
Sbjct: 403 KIATEKDFLEAVNKV 417

ref|XP_464508.1| 26S proteasome regulatory particle triple-A ATPase subunit4 [Oryza sativa (japonica cultivar-group)]
dbj|BAD25481.1| 26S proteasome regulatory particle triple-A ATPase subunit4 [Oryza sativa (japonica cultivar-group)]
dbj|BAD15843.1| 26S proteasome regulatory particle triple-A ATPase subunit4 [Oryza sativa (japonica cultivar-group)]
dbj|BAB17625.1| 26S proteasome regulatory particle triple-A ATPase subunit4 [Oryza sativa (japonica cultivar-group)]
(400 aa)

Score: 280 bits (715), Expect: 9.37405e-74
Length: 311, Idn/Pos/Gap = 145/204/0 (46%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     +     VD  +L  G  V ++  +  I+  LP E D  V     ++   
Sbjct:  77 IVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGN 136

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++ +GGL  QI E+ E++ LP+ +  LF RVGIKPPKGVL+YGPPGTGKTLLARA A+
Sbjct: 137 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 196

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
              A FLK+  ++++  +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S 
Sbjct: 197 NIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 256

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELLNQLDGFD+   V+++ ATNRPD+LD AL+R GRLDRKIE P P+E AR
Sbjct: 257 DREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQAR 316

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +L+IH+  +  H ++ YE + +  + FN A L+ VC EAGMAA+RA+R  V+HEDF+ 
Sbjct: 317 MEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFMK 376

Query: 476 GIAAVQAKKKM 486
            +  +   KK+
Sbjct: 377 AVRKLNDAKKL 387

ref|NP_648525.1| CG7257-PA [Drosophila melanogaster]
gb|AAF49987.1| CG7257-PA [Drosophila melanogaster]
gb|AAL90005.1| AT06668p [Drosophila melanogaster]
(398 aa)

Score: 280 bits (715), Expect: 1.02751e-73
Length: 294, Idn/Pos/Gap = 141/199/0 (47%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           ++  +L+PG  V ++  +  I+  LP E D  V     ++    ++A+IGGL +QI E+ 
Sbjct:  96 INKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELR 155

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  +F RVGI PPKG L+YGPPGTGKTLLARA A+Q  A FLK+  +++V  
Sbjct: 156 EVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDK 215

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ FA A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 216 YIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 275

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRK+E P P+E AR  IL+IH+  +N   ++
Sbjct: 276 FDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEI 335

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ +C EAG+ ALR DR+ VI EDF+  +  +   KK+
Sbjct: 336 DYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKL 389

ref|NP_989342.1| hypothetical protein LOC394968 [Xenopus tropicalis]
gb|AAH64227.1| Hypothetical protein MGC76159 [Xenopus tropicalis]
(389 aa)

Score: 279 bits (714), Expect: 1.12628e-73
Length: 294, Idn/Pos/Gap = 143/197/0 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  87 LDKTKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 266

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 267 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHAGPITKHGEI 326

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RADR  V+ EDF+  +  V   KK+
Sbjct: 327 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADRDFVVQEDFMKAVRKVADSKKL 380

gb|AAH55215.1| Proteasome 26S ATPase subunit 4 isoform 1 [Danio rerio]
ref|NP_956044.1| proteasome 26S ATPase subunit 4 isoform 1 [Danio rerio]
(418 aa)

Score: 279 bits (714), Expect: 1.16451e-73
Length: 316, Idn/Pos/Gap = 144/207/0 (45%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 162 VLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+  GRLDRKIEFP PD   +
Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQK 341

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +    + KMN+  +V  E+     D  + A + ++C EAGM A+R +R +V+ +DF  
Sbjct: 342 RLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEK 401

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K +    +Y
Sbjct: 402 AYKTVIKKDEQEHEFY 417

ref|NP_633030.1| 26S proteasome regulatory subunit RPT2/S4 [Methanosarcina mazei Go1]
gb|AAM30702.1| 26S proteasome regulatory subunit RPT2/S4 [Methanosarcina mazei Goe1]
(440 aa)

Score: 279 bits (714), Expect: 1.23455e-73
Length: 306, Idn/Pos/Gap = 143/213/0 (46%/69%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           ++V++S      + +   +D  +L PG  V +N+ +  I E +P   +  V A EV E  
Sbjct: 115 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESV 174

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
             D+  IGGLD+QI+E+ EAV LP+T    F R+GI+PPKGVL+YG PGTGKTLLA+A A
Sbjct: 175 EVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVA 234

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T ATF+++ G+ LVQ +IGDG++LVR+ F +A+KKAPSIIFIDELD+I  +R +    
Sbjct: 235 HRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG 294

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
            DRE QRT+++LL ++DGFD+  ++R++AATNRPD+LD A++R GR DR +  P P   A
Sbjct: 295 ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEA 354

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL+IH  KM +  D+ +++LA++T+  + A LKA+  EAGM A+R D+++V  E+F+
Sbjct: 355 RGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFL 414

Query: 475 DGIAAV 480
           + +  V
Sbjct: 415 EAVEKV 420

ref|NP_341819.1| AAA family ATPase [Sulfolobus solfataricus P2]
gb|AAK40609.1| AAA family ATPase [Sulfolobus solfataricus P2]
sp|Q980M1|PSMR_SULSO Proteasome-activating nucleotidase (Proteasome regulatory subunit)
pir||B90169 AAA family ATPase [imported] - Sulfolobus solfataricus
(393 aa)

Score: 279 bits (714), Expect: 1.28714e-73
Length: 310, Idn/Pos/Gap = 143/210/0 (46%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+V++S+   + + I   +D   ++PG  V +N+    ILE LP++ D  VK  E+ ERP
Sbjct:  70 VLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERP 129

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +++IGGL++QI E+ E V LP+ +  +F  +G++PPKGVL+YGPPGTGKT+LA+A A
Sbjct: 130 NVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVA 189

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            ++ A F+ +  +   Q F+G+GAR+VR+ F +AK+KAPSIIFIDE+DAIG KR D   S
Sbjct: 190 TESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTS 249

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+RE QRT+++LL +LDGFD  D+V+++AATNR DILD AL+R GR DR IE P PD   
Sbjct: 250 GEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKG 309

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I  I+ +KM +  +++ E L++ T+ F+ A +K VCVEA   A+R  R  V   D +
Sbjct: 310 RTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLV 369

Query: 475 DGIAAVQAKK 484
           + I  +  K+
Sbjct: 370 EAINKINVKR 379

emb|CAE65902.1| Hypothetical protein CBG11069 [Caenorhabditis briggsae]
(438 aa)

Score: 279 bits (713), Expect: 1.44663e-73
Length: 323, Idn/Pos/Gap = 154/208/6 (47%/64%/1%)

Query: 169 NQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYL------ILEKLPEEYD 222
           + +  AVVV   +++  ++PI  +VD   LR   LV V            I+  L ++ D
Sbjct: 107 DDEKHAVVVVEGSKREWYIPILSIVDKDLLRLNALVMVKAGGMFKTVPTAIVGVLDDKID 166

Query: 223 ARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPP 282
           +     +V++ P E F DIGG + QI+E+ E+V LP+TH   +E +GI  PKGV++YG P
Sbjct: 167 SNASGHKVEKCPKESFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEP 226

Query: 283 GTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD 342
           GTGKTLLA+A A  T ATF++  G+ LVQ   G+GARLVR  F +AK +APSI+FIDE+D
Sbjct: 227 GTGKTLLAKAVANSTSATFIRATGSDLVQKNSGEGARLVRQIFQMAKDQAPSIVFIDEID 286

Query: 343 AIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLD 402
           A+GTKRFD+   G++E QRT+LELLNQLDGF+   DV+V+ ATNR D LD AL+R GR+D
Sbjct: 287 AVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKVIMATNRIDSLDPALIRPGRID 346

Query: 403 RKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           RKIE P PDE  R +I  IH+  M +   V+YE +       + A +KAVC EAGM ALR
Sbjct: 347 RKIELPRPDEKTRQKIFGIHTSGMTLQKAVTYESVLGKEKSISGAEIKAVCTEAGMMALR 406

Query: 463 ADRKVVIHEDFIDGIAAVQAKKK 485
           + RK V  +DF   + +V   KK
Sbjct: 407 SQRKCVGADDFEKALKSVMLSKK 429

emb|CAC27098.1| 26S protease regulatory SU 7 [Guillardia theta]
ref|NP_113529.1| 26S protease regulatory SU 7 [Guillardia theta]
pir||E90115 26S protease regulatory SU 7 [imported] - Guillardia theta nucleomorph
(394 aa)

Score: 279 bits (713), Expect: 1.6395e-73
Length: 295, Idn/Pos/Gap = 140/192/1 (47%/65%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           +++  G  VG+++  Y I   LP + D  V    V+E+P   + +IGG   QI E+ E V
Sbjct:  93 TDIEEGMRVGIDRSKYQIQITLPLKIDPNVTMMTVEEKPEITYKEIGGCKNQILEIKEIV 152

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
             P+ +   F  +GI PPKG L+YGPPGTGKTL+ARA A +T A+F+K+  + LVQ +IG
Sbjct: 153 EYPLLYPRRFSLMGIDPPKGALLYGPPGTGKTLVARAVANKTNASFVKINCSELVQKYIG 212

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GARLVR+ F L+K K   I+F DELDAIG  RF     G+ E QRTMLE++NQLDGF++
Sbjct: 213 EGARLVRELFNLSKTKFACIMFFDELDAIGGTRFSGASGGENEVQRTMLEIVNQLDGFEK 272

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             + +VL ATNRPD +D AL+R GRLDRKIEF  PD + R  IL+IHS+KM     + YE
Sbjct: 273 RGNTKVLMATNRPDTIDPALLRPGRLDRKIEFSLPDLSGRVTILKIHSKKMKKEESIRYE 332

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMSLNY 490
            +AR   +   A ++++C+EAGM A+R   K+V  EDF+D I  V  K  +  +Y
Sbjct: 333 LIARLCPNSTGADIRSICIEAGMFAIRKRHKIVYEEDFLDSINKV-LKNNLKFSY 386

ref|XP_214147.2| PREDICTED: similar to Psmc6 protein [Rattus norvegicus]
(403 aa)

Score: 279 bits (713), Expect: 1.65324e-73
Length: 294, Idn/Pos/Gap = 143/196/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct: 101 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 160

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 161 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 220

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 221 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 280

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 281 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 340

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 341 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 394

gb|AAP36199.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 [synthetic construct]
gb|AAX29475.1| proteasome 26S subunit 6 [synthetic construct]
(390 aa)

Score: 279 bits (713), Expect: 1.72367e-73
Length: 294, Idn/Pos/Gap = 143/196/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 266

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 267 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 326

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 327 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380

sp|Q8TI88|PSMR_METAC Proteasome-activating nucleotidase (Proteasome regulatory subunit)
(421 aa)

Score: 278 bits (712), Expect: 1.82734e-73
Length: 306, Idn/Pos/Gap = 143/210/0 (46%/68%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           ++V++S      + +   +D  +L PG  V +N+ +  I E +P   +  V A EV E  
Sbjct:  95 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESI 154

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
             D+  IGGLD+QI+E+ EAV LP+     F R+GI+PPKGVL+YG PGTGKTLLA+A A
Sbjct: 155 EVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVA 214

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T ATF+++ G+ LVQ +IGDG++LVR+ F +A+KKAPSIIFIDELD+I  +R +    
Sbjct: 215 HRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG 274

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
            DRE QRT+++LL ++DGFD+  ++R++AATNRPD+LD A++R GR DR +  P P   A
Sbjct: 275 ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEA 334

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL+IH  KM +  D+ +++LA+ T+  + A LKA+  EAGM A+R D+ +V  EDF+
Sbjct: 335 RGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFL 394

Query: 475 DGIAAV 480
           + +  V
Sbjct: 395 EAVEKV 400

ref|NP_619132.1| proteasome-activating nucleotidase [Methanosarcina acetivorans C2A]
gb|AAM07612.1| proteasome-activating nucleotidase [Methanosarcina acetivorans str. C2A]
(441 aa)

Score: 278 bits (712), Expect: 1.82734e-73
Length: 306, Idn/Pos/Gap = 143/210/0 (46%/68%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           ++V++S      + +   +D  +L PG  V +N+ +  I E +P   +  V A EV E  
Sbjct: 115 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESI 174

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
             D+  IGGLD+QI+E+ EAV LP+     F R+GI+PPKGVL+YG PGTGKTLLA+A A
Sbjct: 175 EVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVA 234

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T ATF+++ G+ LVQ +IGDG++LVR+ F +A+KKAPSIIFIDELD+I  +R +    
Sbjct: 235 HRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG 294

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
            DRE QRT+++LL ++DGFD+  ++R++AATNRPD+LD A++R GR DR +  P P   A
Sbjct: 295 ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEA 354

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL+IH  KM +  D+ +++LA+ T+  + A LKA+  EAGM A+R D+ +V  EDF+
Sbjct: 355 RGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFL 414

Query: 475 DGIAAV 480
           + +  V
Sbjct: 415 EAVEKV 420

ref|NP_080235.2| proteasome 26S ATPase subunit 6 [Mus musculus]
ref|XP_535701.1| PREDICTED: similar to conserved ATPase domain protein 44 [Canis familiaris]
gb|AAP35489.1| proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Homo sapiens]
gb|AAX42018.1| proteasome 26S subunit 6 [synthetic construct]
gb|AAX42017.1| proteasome 26S subunit 6 [synthetic construct]
gb|AAH05390.1| Proteasome 26S ATPase subunit 6 [Homo sapiens]
sp|P62334|PRS10_MOUSE 26S protease regulatory subunit S10B (Proteasome subunit p42) (Proteasome 26S subunit ATPase 6)
sp|P62333|PRS10_HUMAN 26S protease regulatory subunit S10B (Proteasome subunit p42) (Proteasome 26S subunit ATPase 6)
sp|P62335|PRS10_SPETR 26S protease regulatory subunit S10B (Proteasome subunit p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44)
gb|AAB61616.1| 26S proteasome regulatory subunit [Homo sapiens]
gb|AAB40354.1| conserved ATPase domain protein 44
emb|CAG32990.1| PSMC6 [Homo sapiens]
dbj|BAB28078.1| unnamed protein product [Mus musculus]
ref|NP_002797.2| proteasome 26S ATPase subunit 6 [Homo sapiens]
(389 aa)

Score: 278 bits (712), Expect: 1.93724e-73
Length: 294, Idn/Pos/Gap = 143/196/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 266

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 267 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 326

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 327 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380

gb|AAH45087.1| Psmc6 protein [Xenopus laevis]
(403 aa)

Score: 278 bits (712), Expect: 2.0367e-73
Length: 294, Idn/Pos/Gap = 143/196/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct: 101 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELR 160

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 161 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 220

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 221 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 280

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 281 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHAGPITKHGEI 340

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 341 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 394

emb|CAE61029.1| Hypothetical protein CBG04772 [Caenorhabditis briggsae]
(411 aa)

Score: 278 bits (712), Expect: 2.15919e-73
Length: 316, Idn/Pos/Gap = 148/209/0 (46%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    F+ +   +D   L+PG  V ++K S  +++ LP E D+ ++    DE+P 
Sbjct:  95 IVGSTTGSNYFVRVLSTLDRELLKPGCSVSLHKYSNALVDVLPPEADSSIQMLRPDEKPN 154

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGGLD Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A AA
Sbjct: 155 VAYSDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 214

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LAK+ +PSIIFIDE+DAI TKRFD+    
Sbjct: 215 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 274

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ+ +++V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 275 DREVQRILLELLNQMDGFDQSTNIKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQK 334

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +      +MN+  DV  E+     D  + A + A+C EAGM A+R +R VV+ +D   
Sbjct: 335 RLVFSTVCARMNLSDDVDLEDWVARPDKISGADINAICQEAGMQAVRENRYVVLTKDLEK 394

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K      +Y
Sbjct: 395 AYKNVVKKDTNEFEFY 410

gb|AAV85728.1| At5g58290 [Arabidopsis thaliana]
dbj|BAA96920.1| 26S proteasome AAA-ATPase subunit RPT3 [Arabidopsis thaliana]
gb|AAL49932.1| AT4g10340/F24G24_140 [Arabidopsis thaliana]
ref|NP_200637.1| 26S proteasome AAA-ATPase subunit (RPT3) [Arabidopsis thaliana]
gb|AAF22523.1| 26S proteasome AAA-ATPase subunit RPT3 [Arabidopsis thaliana]
sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog (26S proteasome AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3)
(408 aa)

Score: 278 bits (712), Expect: 2.36675e-73
Length: 316, Idn/Pos/Gap = 142/207/0 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   ++   L+P   V +++ S  +++ LP E D+ +      E+P 
Sbjct:  92 IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPD 151

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             + DIGG D Q +E+ EAV LP+TH  L++++GI PP+GVL+YGPPGTGKT+LA+A A 
Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI T RFD+    
Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 271

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR ++ELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 272 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 331

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             + ++ + KMN+  +V  E+     D  +AA + A+C EAGM A+R +R V++ +DF  
Sbjct: 332 RLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 391

Query: 476 GIAAVQAKKKMSLNYY 491
           G  A   K      +Y
Sbjct: 392 GYRANVKKPDTDFEFY 407

gb|EAK80891.1| hypothetical protein UM00622.1 [Ustilago maydis 521]
ref|XP_398237.1| hypothetical protein UM00622.1 [Ustilago maydis 521]
(478 aa)

Score: 278 bits (711), Expect: 2.46757e-73
Length: 299, Idn/Pos/Gap = 149/198/2 (49%/66%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           +++  G  VGV+++ Y I   LP + D  V   +V+E+P   + D+GG  +QIE++ E V
Sbjct: 177 TDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIEKLREVV 236

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LP+     F  +GI PPKGVL+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ ++G
Sbjct: 237 ELPLLSPERFVNLGIDPPKGVLLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG 296

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+NQLDGFD 
Sbjct: 297 EGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDA 356

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++VL ATNRPD LD AL+R GRLDR++EF  PD   RA ILRIH+R M+V  D+ Y 
Sbjct: 357 RGNIKVLMATNRPDTLDPALLRPGRLDRRVEFGLPDNDGRANILRIHARSMSVEKDIRYH 416

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV--QAKKKMSLNYYA 492
            +AR   +   A L++V  EAGM A+RA RK+    DF+D +  V  Q  K  S   YA
Sbjct: 417 LIARLCPNATGAELRSVATEAGMFAIRARRKMATERDFLDAVDKVIRQGSKFSSTALYA 475

emb|CAB63651.1| 26S proteasome subunit 8; Tat binding protein [Fagus sylvatica]
(418 aa)

Score: 278 bits (711), Expect: 2.46757e-73
Length: 321, Idn/Pos/Gap = 154/216/7 (47%/67%/2%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK  +     + I   +D++++ P   V +  DSY++   LP + D  V   +V++ P
Sbjct:  93 VLVKVHSEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVP 152

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLF-ERVGIKPPKGVLMYGPPGTGKTLLARAC 293
              +  IGGLD+QI+E+ E + LP+ H  LF E +GI  PKGVL+YGPPGTGKTLLARA 
Sbjct: 153 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFLESLGIAQPKGVLLYGPPGTGKTLLARAV 212

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A  T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S  
Sbjct: 213 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 272

Query: 354 -SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDE 412
            +GD E Q  MLELLNQLDGF+    ++VL  TNR DILD AL+R GR+DRKIEFP+P+ 
Sbjct: 273 GNGDSEVQDHMLELLNQLDGFESIKQIKVLMRTNRIDILDQALLRPGRIDRKIEFPNPNR 332

Query: 413 AARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKV--VIH 470
            +R  IL+IHSR+MN+   +  +++A   +  + A LKAVC EAGM AL A+R+V  V  
Sbjct: 333 ESRFDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALTAERRVRLVTQ 392

Query: 471 EDFIDGIAAVQAK---KKMSL 488
           EDF   +A V  K   K MSL
Sbjct: 393 EDFEMAVAKVMKKETEKNMSL 413

gb|EAL37398.1| 26S proteasome AAA-ATPase subunit RPT3 [Cryptosporidium hominis]
(401 aa)

Score: 278 bits (711), Expect: 2.48825e-73
Length: 317, Idn/Pos/Gap = 139/211/0 (43%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++     ++ +   ++  +L+P   V +++ S+ I++ LP E D+ ++  ++ E+P 
Sbjct:  84 IVSSTAGSNYYVRVLSTINREDLKPPASVALHRHSHAIVDILPPEADSSIQMLQMQEKPD 143

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +EV EAV LP+    L++++GI PP GVL+YGPPGTGKT+LA+A A 
Sbjct: 144 VTYSDIGGMDIQKQEVREAVELPLVCPELYQQIGIDPPTGVLLYGPPGTGKTMLAKAVAN 203

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATF+++ G+  VQ ++G+G R+VRD F LA++ +P+I+FIDE+D+I TKRFD+    
Sbjct: 204 HTTATFIRVVGSEFVQKYLGEGPRMVRDVFRLARENSPAIVFIDEVDSIATKRFDAQTGA 263

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   R
Sbjct: 264 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQR 323

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +  + KMN+  +V  EE     +  +AA + A+  EAGM A+R +R V++ +DF  
Sbjct: 324 RLIFQTITAKMNLSEEVDLEEYVSRPEKISAADIAAISQEAGMQAVRKNRYVILPKDFEK 383

Query: 476 GIAAVQAKKKMSLNYYA 492
           G      K     ++Y+
Sbjct: 384 GWKIHVKKSDRDFDFYS 400

ref|NP_280691.1| ATP-dependent 26S proteinase regulatory subunit 4 homolog [Halobacterium sp. NRC-1]
gb|AAG20171.1| ATP-dependent 26S proteinase regulatory subunit 4 homolog; PrrIV1 [Halobacterium sp. NRC-1]
pir||G84350 hypothetical protein prrIV1 [imported] - Halobacterium sp. NRC-1
sp|Q9HNP9|PSR1_HALN1 Proteasome-activating nucleotidase 1 (Proteasome regulatory subunit 1)
(411 aa)

Score: 278 bits (711), Expect: 2.94013e-73
Length: 322, Idn/Pos/Gap = 160/221/4 (49%/68%/1%)

Query: 163 AQESDANQQSPAVVVKTSTRQTVFLPI-PGLVDVSELRPGDLVGVNKDSYLILEKLPEEY 221
           A   D  +   AV+ +    Q V   + P L D  E+  GD V +N DS+ +   L +E 
Sbjct:  78 ATVEDLPEDGSAVIKQHGNNQEVLTELSPRLADTLEV--GDRVAIN-DSFSVQRVLDDET 134

Query: 222 DARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGP 281
           DAR +A EVDE P+  +ADIGGLD Q+ EV EAV  P+ +   F+ VG++PP GVL++GP
Sbjct: 135 DARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGP 194

Query: 282 PGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDEL 341
           PGTGKT+LA+A A QT A+F+K+AG+ LV+ FIG+G+RLVRD F LA++K P+IIFIDE+
Sbjct: 195 PGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEI 254

Query: 342 DAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRL 401
           DA+  KR DS  SGD E QRTM++LL+++DGFD+  D+R++AATNR D+LD+A++R GR 
Sbjct: 255 DAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRF 314

Query: 402 DRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAAL 461
           DR IE P+P+  AR RIL IH+ +MNV   V + +LA  T +F+ A L ++  EAGM A+
Sbjct: 315 DRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAI 374

Query: 462 RADRKVVIHEDFIDGIAAVQAK 483
           R DR  V  +DF D    + A+
Sbjct: 375 RDDRDEVHRQDFDDAYEKLVAE 396

emb|CAA47023.1| sug1 [Saccharomyces cerevisiae]
gb|AAB35417.1| 26S protease subunit S8=SUG1 homolog [human, erythrocytes, Peptide, 405 aa]
(405 aa)

Score: 278 bits (711), Expect: 2.94013e-73
Length: 311, Idn/Pos/Gap = 146/205/0 (46%/65%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   ++V +L+    V +  DSY++ + L  + D  V    V++ P
Sbjct:  84 VLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVP 143

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGL KQI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A
Sbjct: 144 DSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 203

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T   F++++G  LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 204 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGG 263

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+ + +++++ ATNR DILD AL+R GR+DRKIEFP P  AA
Sbjct: 264 GDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAA 323

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           RA ILRIHSRKMN+   ++  ++A   +  + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 324 RAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 383

Query: 475 DGIAAVQAKKK 485
             +  V  K +
Sbjct: 384 LAVGKVMNKNQ 394

emb|CAA96750.1| SUG1 [Saccharomyces cerevisiae]
gb|AAT93154.1| YGL048C [Saccharomyces cerevisiae]
pir||S64052 26S proteasome regulatory particle chain RPT6 - yeast  (Saccharomyces cerevisiae)
ref|NP_011467.1| One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle [Saccharomyces cerevisiae]
sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog (SUG1 protein) (CIM3 protein) (TAT-binding protein TBY1)
gb|AAA35138.1| Tat-binding protein
(405 aa)

Score: 278 bits (711), Expect: 2.94013e-73
Length: 311, Idn/Pos/Gap = 146/205/0 (46%/65%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   ++V +L+    V +  DSY++ + L  + D  V    V++ P
Sbjct:  84 VLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVP 143

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGL KQI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A
Sbjct: 144 DSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 203

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T   F++++G  LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 204 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGG 263

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+ + +++++ ATNR DILD AL+R GR+DRKIEFP P  AA
Sbjct: 264 GDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAA 323

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           RA ILRIHSRKMN+   ++  ++A   +  + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 324 RAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 383

Query: 475 DGIAAVQAKKK 485
             +  V  K +
Sbjct: 384 LAVGKVMNKNQ 394

ref|XP_533103.1| PREDICTED: similar to proteasome (prosome, macropain) 26S subunit, ATPase 2 [Canis familiaris]
(783 aa)

Score: 278 bits (711), Expect: 3.01465e-73
Length: 314, Idn/Pos/Gap = 144/205/0 (45%/65%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A+ + P  ++         + +   V  +++  G  VGV+++ Y I   LP + D  V 
Sbjct: 453 NADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT 512

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
             +V+E+P   ++D+GG  +QIE++ E V  P+ H   F  +GI+PPKGVL++GPPGTGK
Sbjct: 513 MMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 572

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TL ARA A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   +IF DE+DAIG 
Sbjct: 573 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 632

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
            RFD    GD E QRTMLEL+NQLDGFD   +++VL ATNRPD LD ALMR GRLDRKIE
Sbjct: 633 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 692

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           F  PD   R  I +IH+R M+V  D+ +E LAR   +   A +++VC EAGM A+RA RK
Sbjct: 693 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK 752

Query: 467 VVIHEDFIDGIAAV 480
           +   +DF++ +  V
Sbjct: 753 IATEKDFLEAVNKV 766

prf||1813279A SUG1 gene
(400 aa)

Score: 278 bits (711), Expect: 3.09107e-73
Length: 311, Idn/Pos/Gap = 146/205/0 (46%/65%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   ++V +L+    V +  DSY++ + L  + D  V    V++ P
Sbjct:  84 VLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVP 143

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGL KQI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A
Sbjct: 144 DSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 203

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T   F++++G  LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 204 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGG 263

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+ + +++++ ATNR DILD AL+R GR+DRKIEFP P  AA
Sbjct: 264 GDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAA 323

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           RA ILRIHSRKMN+   ++  ++A   +  + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 324 RAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 383

Query: 475 DGIAAVQAKKK 485
             +  V  K +
Sbjct: 384 LAVGKVMNKNQ 394

ref|NP_572308.2| CG3455-PA [Drosophila melanogaster]
gb|AAF46146.2| CG3455-PA [Drosophila melanogaster]
(390 aa)

Score: 278 bits (710), Expect: 3.14308e-73
Length: 294, Idn/Pos/Gap = 143/198/0 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+ G  V ++  +  I+  LP E D  V     ++     ++ IGGL  QI E+ 
Sbjct:  88 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELR 147

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  LF RVGI PPKG L+YGPPGTGKTLLARA A+Q  A FLK+  +++V  
Sbjct: 148 EVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 207

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 208 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 267

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  IL+IH+ K+  H ++
Sbjct: 268 FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEI 327

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D+FN A L+ VC EAG+ A+RA+R+ VI EDF+  +  V   KK+
Sbjct: 328 DYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSDNKKL 381

ref|NP_963479.1| hypothetical protein NEQ186 [Nanoarchaeum equitans Kin4-M]
gb|AAR39040.1| NEQ186 [Nanoarchaeum equitans Kin4-M]
(369 aa)

Score: 278 bits (710), Expect: 3.16942e-73
Length: 289, Idn/Pos/Gap = 139/198/1 (48%/68%/0%)

Query: 197 ELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVV 256
           E+ PGD V +N+ + +I+ K  +     + AF + E+P  D++ IGGL +QIEE+ EA+ 
Sbjct:  67 EIEPGDTVFLNQSNMVIVGKAEKRKKFNIDAFVITEKPNVDWSQIGGLKEQIEEIREAIE 126

Query: 257 LPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGD 316
           LP+T   +FE++GI+PPKGVL+YGPPGTGKTL+ +A A    ATF+ + G+ LVQ +IG+
Sbjct: 127 LPLTKPEIFEKIGIEPPKGVLLYGPPGTGKTLIGKALAKSANATFIYIVGSELVQKYIGE 186

Query: 317 GARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQN 376
           GA+LV++ F  A++ AP+I+FIDE+DAI  +R ++  SG+RE QRT ++LL ++DGF   
Sbjct: 187 GAKLVKELFDYAREHAPAIVFIDEIDAIAARRIETGTSGEREVQRTFMQLLAEIDGFKPL 246

Query: 377 DDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEE 436
           D V+V+ ATNR DILD A++R GR DR I  P PD+  R  I +IH+RKM    D+ Y  
Sbjct: 247 DKVKVIGATNRLDILDPAILRPGRFDRIIHIPLPDKQGRIEIFKIHTRKMRTK-DIDYSL 305

Query: 437 LARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKK 485
           LA  T+ F+ A +K VC+EAG  A+R  R  VI EDFI  I  V+  +K
Sbjct: 306 LAELTEGFSGAEIKQVCIEAGYLAIRNKRDYVILEDFIKAIDKVKKMRK 354

gb|AAB67835.1| POTATP1
sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog
pir||T07110 vacuolar proton-ATPase chain E - potato
(413 aa)

Score: 278 bits (710), Expect: 3.19597e-73
Length: 316, Idn/Pos/Gap = 142/207/0 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   ++   L+P   VG+++ S  +++ LP E D+ +      E+P 
Sbjct:  97 IVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPD 156

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             + DIGG D Q +E+ EAV LP+TH  L++++GI PP+GVL+YGPPGTGKT+LA+A A 
Sbjct: 157 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 216

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI T RFD+    
Sbjct: 217 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 276

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR ++ELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 277 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 336

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             + ++ + KMN+  +V  E+     D  +AA + A+C EAGM A+R +R V++ +DF  
Sbjct: 337 RLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEK 396

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K      +Y
Sbjct: 397 GYRTNVKKPDTDFEFY 412

ref|NP_001006494.1| similar to Psmc6 protein [Gallus gallus]
emb|CAG31621.1| hypothetical protein [Gallus gallus]
(389 aa)

Score: 278 bits (710), Expect: 3.50318e-73
Length: 294, Idn/Pos/Gap = 143/196/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 266

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 267 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 326

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 327 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380

gb|AAH43044.1| Psmc6 protein [Mus musculus]
(390 aa)

Score: 278 bits (710), Expect: 3.83993e-73
Length: 294, Idn/Pos/Gap = 143/195/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  88 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 147

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 148 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 207

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG  RF    S DRE QRT++ELLNQ+DG
Sbjct: 208 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGPRFSEGTSADREIQRTLMELLNQMDG 267

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 268 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 327

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 328 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 381

emb|CAE64409.1| Hypothetical protein CBG09101 [Caenorhabditis briggsae]
(417 aa)

Score: 277 bits (709), Expect: 4.38835e-73
Length: 316, Idn/Pos/Gap = 147/209/0 (46%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ +  ++D   L+PG  V ++K S  +++ LP E D+ ++    DE+P 
Sbjct: 101 IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPD 160

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             + DIGGLD Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A AA
Sbjct: 161 VSYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 220

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LAK+ +PSIIFIDE+DAI TKRFD+    
Sbjct: 221 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 280

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ+ +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 281 DREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQK 340

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +      +MN+  DV  E+     D  + A + ++C EAGM A+R +R VV+ +D   
Sbjct: 341 RLVFTTICSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEK 400

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K      +Y
Sbjct: 401 AYKNVVKKDTNDFEFY 416

ref|NP_175781.1| 26S proteasome AAA-ATPase subunit, putative [Arabidopsis thaliana]
(464 aa)

Score: 277 bits (709), Expect: 4.65229e-73
Length: 285, Idn/Pos/Gap = 142/192/0 (49%/67%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           +++  G  VGV++  Y I   LP + D  V    V+E+P   ++DIGG  +QIE++ E V
Sbjct: 162 TDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVV 221

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LPM H   F R+GI PPKGVL YGPPG+GKTL+ARA A +T A F+++ G+ LVQ +IG
Sbjct: 222 ELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIG 281

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GAR+VR+ F +A+ K   I+F DE+DAIG  RFD     D E QRTMLE+L QLDGFD 
Sbjct: 282 EGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDA 341

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++VL ATNRPDILD AL+R GRLDRK+EF  PD   R +I +IH+R M+   D+ +E
Sbjct: 342 RGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFE 401

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            LA    +   A +++VC+EAGM A+ A RK V  +DF+D +  V
Sbjct: 402 LLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKV 446

emb|CAF93631.1| unnamed protein product [Tetraodon nigroviridis]
(389 aa)

Score: 277 bits (709), Expect: 4.73058e-73
Length: 294, Idn/Pos/Gap = 142/197/0 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  87 LDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 266

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IHS  +  H ++
Sbjct: 267 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSSPITKHGEI 326

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            +E + + +D FN A L+ VC EAG+ A+R+DR+ V  EDF+  +  V   KK+
Sbjct: 327 DFEAIVKLSDGFNGADLRNVCTEAGLFAIRSDREYVTQEDFMKAVRKVADSKKL 380

gb|AAF02853.1| Putative 26S proteasome ATPase subunit [Arabidopsis thaliana]
pir||H96577 hypothetical protein T18A20.2 [imported] - Arabidopsis thaliana
(451 aa)

Score: 277 bits (709), Expect: 4.73058e-73
Length: 285, Idn/Pos/Gap = 142/192/0 (49%/67%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           +++  G  VGV++  Y I   LP + D  V    V+E+P   ++DIGG  +QIE++ E V
Sbjct: 149 TDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVV 208

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LPM H   F R+GI PPKGVL YGPPG+GKTL+ARA A +T A F+++ G+ LVQ +IG
Sbjct: 209 ELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIG 268

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GAR+VR+ F +A+ K   I+F DE+DAIG  RFD     D E QRTMLE+L QLDGFD 
Sbjct: 269 EGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDA 328

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++VL ATNRPDILD AL+R GRLDRK+EF  PD   R +I +IH+R M+   D+ +E
Sbjct: 329 RGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFE 388

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            LA    +   A +++VC+EAGM A+ A RK V  +DF+D +  V
Sbjct: 389 LLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKV 433

gb|AAH73644.1| Psmc6 protein [Xenopus laevis]
(392 aa)

Score: 277 bits (709), Expect: 4.89113e-73
Length: 294, Idn/Pos/Gap = 143/196/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  90 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELR 149

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 150 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 209

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 210 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 269

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 270 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHAGPITKHGEI 329

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 330 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 383

gb|EAK87845.1| 26S proteasome regulatory subunit 26b like AAA ATpase [Cryptosporidium parvum]
(401 aa)

Score: 277 bits (709), Expect: 4.93211e-73
Length: 317, Idn/Pos/Gap = 139/211/0 (43%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++     ++ +   ++  +L+P   V +++ S+ I++ LP E D+ ++  ++ E+P 
Sbjct:  84 IVSSTAGSNYYVRVLSTINREDLKPPASVALHRHSHAIVDILPPEADSSIQMLQMQEKPD 143

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGG+D Q +EV EAV LP+    L++++GI PP GVL+YGPPGTGKT+LA+A A 
Sbjct: 144 VTYSDIGGMDIQKQEVREAVELPLVCPELYQQIGIDPPTGVLLYGPPGTGKTMLAKAVAN 203

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T ATF+++ G+  VQ ++G+G R+VRD F LA++ +P+I+FIDE+D+I TKRFD+    
Sbjct: 204 HTTATFIRVVGSEFVQKYLGEGPRMVRDVFRLARENSPAIVFIDEVDSIATKRFDAQTGA 263

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   R
Sbjct: 264 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQR 323

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +  + KMN+  +V  EE     +  +AA + A+  EAGM A+R +R V++ +DF  
Sbjct: 324 RLIFQTITAKMNLSEEVDLEEYVSRPEKISAADIAAISQEAGMQAVRKNRYVILPKDFEK 383

Query: 476 GIAAVQAKKKMSLNYYA 492
           G      K     ++Y+
Sbjct: 384 GWKIHVKKSDRDFDFYS 400

pir||T49507 probable 26S proteasome regulatory particle chain RPT1 [imported] - Neurospora crassa
(439 aa)

Score: 277 bits (709), Expect: 5.14222e-73
Length: 288, Idn/Pos/Gap = 142/194/0 (49%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y IL  LP + DA V    V+E+P   + D+GG  +Q+E++ 
Sbjct: 135 VSPTDIEEGMRVGVDRNKYQILLPLPPKIDASVTMMTVEEKPDVTYGDVGGCKEQVEKLR 194

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V +P+     F  +GI PPKG L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 195 EVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 254

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+ QLDG
Sbjct: 255 YVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDG 314

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP  LD ALMR GR+DRKIEF  PD   RA ILRIH++ M+V  D+
Sbjct: 315 FDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDLEGRANILRIHAKSMSVERDI 374

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 375 RWELISRLCPNATGAELRSVCTEAGMFAIRARRKVASEKDFLSAVDKV 422

dbj|BAA11338.1| proteasome subunit p42 [Homo sapiens]
(389 aa)

Score: 277 bits (709), Expect: 5.22875e-73
Length: 294, Idn/Pos/Gap = 143/195/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct:  87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 266

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V++  ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 267 FDTLHRVKMTMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 326

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 327 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380

gb|AAV38126.1| proteasome-activating nucleotidase A; PanA; AAA subfamily ATPase; triple-A subfamily ATPase [Haloferax volcanii]
(406 aa)

Score: 277 bits (708), Expect: 5.4515e-73
Length: 390, Idn/Pos/Gap = 166/230/14 (42%/58%/3%)

Query:  92 SAPHAETALATQPNGSVSETQGEARNQRLGSGARGGSDLINRSSGITSETQTPGAADHED 151
           SA   E   A Q    V ETQ E    +L       +    +   +T E +    +    
Sbjct:  17 SASQQEKITALQERLEVLETQNEEMRDKLLDTNAENNKYQQKLERLTHENKKLKQSPLFV  76

Query: 152 DLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY 211
                  DEG   +   N Q     V    R+             EL P   V VN +S 
Sbjct:  77 ATVQEITDEGVIIKQHGNNQEALTEVTDEMRE-------------ELEPDARVAVN-NSL 122

Query: 212 LILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIK 271
            I+++L +E D R +  +V+  P   + DIGGL++Q++EV E V +P+    +F  VGI 
Sbjct: 123 SIVKRLDKETDVRARVMQVEHSPDVTYEDIGGLEEQMQEVRETVEMPLDRPEMFAEVGID 182

Query: 272 PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKK 331
           PP GVL+YGPPGTGKT+LA+A A QT A+F+K+AG+ LV  FIG+GA+LVRD F +A++ 
Sbjct: 183 PPSGVLLYGPPGTGKTMLAKAVANQTNASFIKMAGSELVHKFIGEGAKLVRDLFEVAREN 242

Query: 332 APSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDIL 391
            P++IFIDE+DAI +KR DS  SGD E QRTM++LL ++DGFD+  ++R++AATNR D+L
Sbjct: 243 EPAVIFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLAEMDGFDERGNIRIIAATNRFDML 302

Query: 392 DAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKA 451
           D A++R GR DR IE P P+E  R  I +IH+RKMNV  DV + ELA   D+ + A +KA
Sbjct: 303 DPAILRPGRFDRLIEVPKPNEDGREIIFQIHTRKMNVSDDVDFVELAEMADNASGADIKA 362

Query: 452 VCVEAGMAALRADRKVVIHEDFIDGIAAVQ 481
           VC EAGM A+R DR  +  +DF+D    +Q
Sbjct: 363 VCTEAGMFAIRDDRTEIFMQDFVDAWEKIQ 392

gb|AAB33476.1| Tat-binding protein alpha, DdTBP alpha=Tat-binding protein 1 homolog/26S protease subunit homolog [Dictyostelium discoideum, Peptide, 439 aa]
(439 aa)

Score: 277 bits (708), Expect: 6.38801e-73
Length: 298, Idn/Pos/Gap = 141/202/0 (47%/67%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++     ++ I   VD S+L  G  V +N  +  ++  +  E D  V   +V++ PT
Sbjct: 121 IVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVIKVEKAPT 180

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E ++DIGGL+ Q++E+ EA+ LP+TH  L++ +GIKPPKGV++YG PGTGKTLLA+A A 
Sbjct: 181 ESYSDIGGLEAQVQEMKEAIELPLTHPELYKEIGIKPPKGVILYGEPGTGKTLLAKAVAN 240

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           Q   TF ++ G+  +Q ++GDG RLVR+ + +A + APSI+FIDE+D++ TKR+DS   G
Sbjct: 241 QYLYTFKRVVGSEKIQKYLGDGPRLVRELYRVADECAPSIVFIDEIDSVFTKRYDSQSGG 300

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           +RE QRTMLELLNQLDGFD   D + + ATNR + LD A +R GR+DRKIEFP PD   +
Sbjct: 301 EREIQRTMLELLNQLDGFDARTDCKCIMATNRIETLDPARIRPGRIDRKIEFPLPDIKTK 360

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            +I ++H+ KMN+  DV+ +E   S DD   A +KA+C E+G+ ALR  R  V H DF
Sbjct: 361 RKIFKLHTAKMNLSEDVNLKEFVMSKDDLCGADIKAICTESGLLALRERRMRVTHTDF 418

gb|EAA55930.1| hypothetical protein MG01581.4 [Magnaporthe grisea 70-15]
ref|XP_363655.1| hypothetical protein MG01581.4 [Magnaporthe grisea 70-15]
(439 aa)

Score: 277 bits (708), Expect: 6.66014e-73
Length: 288, Idn/Pos/Gap = 141/194/0 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y IL  LP + DA V    V+E+P   + D+GG  +Q+E++ 
Sbjct: 135 VSPTDIEEGMRVGVDRNKYQILLPLPPKIDASVTMMTVEEKPDVTYGDVGGCKEQVEKLR 194

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V +P+     F  +GI PPKG L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 195 EVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 254

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DA+G  RFD    GD E QRTMLEL+ QLDG
Sbjct: 255 YVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDG 314

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP  LD ALMR GR+DRKIEF  PD   RA ILRIH++ M+V  D+
Sbjct: 315 FDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDLEGRANILRIHAKSMSVERDI 374

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 375 RWELISRLCPNATGAELRSVCTEAGMFAIRARRKVATEKDFLSAVEKV 422

gb|EAL31743.1| GA17461-PA [Drosophila pseudoobscura]
(397 aa)

Score: 277 bits (708), Expect: 6.71595e-73
Length: 294, Idn/Pos/Gap = 142/198/0 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+ G  V ++  +  I+  LP E D  V     ++     ++ IGGL +QI E+ 
Sbjct:  95 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTEQIRELR 154

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  LF RVGI PPKG L+YGPPGTGKTLLARA A+Q  A FLK+  +++V  
Sbjct: 155 EVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 214

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 215 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 274

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  IL+IH+  +  H ++
Sbjct: 275 FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALTIAKHGEI 334

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D+FN A L+ VC EAG+ A+RA+R+ VI EDF+  +  V   KK+
Sbjct: 335 DYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVSENKKL 388

gb|EAA67169.1| conserved hypothetical protein [Gibberella zeae PH-1]
ref|XP_380735.1| conserved hypothetical protein [Gibberella zeae PH-1]
(440 aa)

Score: 277 bits (708), Expect: 6.88618e-73
Length: 288, Idn/Pos/Gap = 141/194/0 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y I+  LP + DA V    V+E+P   + D+GG  +Q+E++ 
Sbjct: 136 VSPTDIEEGMRVGVDRNKYQIMLPLPPKIDASVTMMTVEEKPDVTYGDVGGCKEQVEKLR 195

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V +P+     F  +GI PPKG L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 196 EVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 255

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+ QLDG
Sbjct: 256 YVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDG 315

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP  LD ALMR GR+DRKIEF  PD   RA ILRIH++ M+V  D+
Sbjct: 316 FDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDLEGRANILRIHAKSMSVERDI 375

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 376 RWELISRLCPNATGAELRSVCTEAGMYAIRARRKVASEKDFLSAVDKV 423

gb|AAM47992.1| 26S proteasome AAA-ATPase subunit RPT4a-like protein [Arabidopsis thaliana]
ref|NP_175120.1| 26S proteasome regulatory complex subunit p42D, putative [Arabidopsis thaliana]
gb|AAL32787.1| similar to 26S proteasome AAA-ATPase subunit RPT4a [Arabidopsis thaliana]
gb|AAF69154.1| F27F5.8 [Arabidopsis thaliana]
(399 aa)

Score: 276 bits (707), Expect: 7.23969e-73
Length: 337, Idn/Pos/Gap = 150/212/0 (44%/62%/0%)

Query: 150 EDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           EDDL   +       E      +  ++VK S+     +     VD  +L  G  V ++  
Sbjct:  50 EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMT 109

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           +  I+  LP E D  V     ++     ++ +GGL  QI E+ E++ LP+ +  LF RVG
Sbjct: 110 TLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVG 169

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
           IKPPKGVL+YGPPGTGKTLLARA A+   A FLK+  ++++  +IG+ ARL+R+ F  A+
Sbjct: 170 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229

Query: 330 KKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
           +  P IIF+DE+DAIG +RF    S DRE QRT++ELLNQLDGFDQ   V+++ ATNRPD
Sbjct: 230 EHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 289

Query: 390 ILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAML 449
           +LD AL+R GRLDRKIE P P+E +R  IL+IH+  +  H ++ YE + +  + FN A L
Sbjct: 290 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADL 349

Query: 450 KAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           + +C EAGM A+RA+R  VIHEDF+  +  +   KK+
Sbjct: 350 RNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKL 386

gb|AAF08391.1| 26S proteasome regulatory complex subunit p42D [Drosophila melanogaster]
(390 aa)

Score: 276 bits (707), Expect: 8.62614e-73
Length: 294, Idn/Pos/Gap = 143/196/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+ G  V ++  +  I+  LP E D  V     +      ++ IGGL  QI E+ 
Sbjct:  88 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEAPGDVTYSAIGGLTDQIRELR 147

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  LF RVGI PPKG L+YGPPGTGKTLLARA A+Q  A FLK+  +++V  
Sbjct: 148 EVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 207

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 208 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 267

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  IL+IH+ K+  H ++
Sbjct: 268 FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEI 327

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D+FN A L+ VC EAG  A+RA+R+ VI EDF+  +  V   KK+
Sbjct: 328 DYEAIVKLSDNFNGADLRNVCTEAGFFAIRAEREYVIQEDFMKAVRKVSDNKKL 381

gb|AAA20608.1| Proteasome regulatory particle, atpase-like protein 3 [Caenorhabditis elegans]
ref|NP_498429.1| proteasome Regulatory Particle, ATPase-like, S6b (46.4 kD) (rpt-3) [Caenorhabditis elegans]
pir||A88485 protein F23F12.6 [imported] - Caenorhabditis elegans
sp|P46502|PRS6B_CAEEL Probable 26S protease regulatory subunit 6B
(414 aa)

Score: 276 bits (707), Expect: 8.9189e-73
Length: 316, Idn/Pos/Gap = 147/209/0 (46%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ +  ++D   L+PG  V ++K S  +++ LP E D+ ++    DE+P 
Sbjct:  98 IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPD 157

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             + DIGGLD Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A AA
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LAK+ +PSIIFIDE+DAI TKRFD+    
Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 277

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ+ +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 278 DREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQK 337

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             +      +MN+  DV  E+     D  + A + ++C EAGM A+R +R VV+ +D   
Sbjct: 338 RLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEK 397

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K      +Y
Sbjct: 398 AYKNVVKKDTNDFEFY 413

emb|CAE76238.1| probable 26S proteasome regulatory subunit YTA3 [Neurospora crassa]
ref|XP_330028.1| probable 26S proteasome regulatory particle chain RPT1 [MIPS] [Neurospora crassa]
gb|EAA34894.1| probable 26S proteasome regulatory particle chain RPT1 [MIPS] [Neurospora crassa]
(439 aa)

Score: 276 bits (706), Expect: 9.94074e-73
Length: 288, Idn/Pos/Gap = 142/194/0 (49%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV+++ Y IL  LP + DA V    V+E+P   + D+GG  +Q+E++ 
Sbjct: 135 VSPTDIEEGMRVGVDRNKYQILLPLPPKIDASVTMMTVEEKPDVTYGDVGGCKEQVEKLR 194

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V +P+     F  +GI PPKG L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 195 EVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 254

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+ QLDG
Sbjct: 255 YVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDG 314

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP  LD ALMR GR+DRKIEF  PD   RA ILRIH++ M+V  D+
Sbjct: 315 FDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDLEGRANILRIHAKSMSVERDI 374

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 375 RWELISRLCPNATGAELRSVCTEAGMFAIRARRKVASEKDFLSAVDKV 422

gb|EAL43335.1| 26s proteasome subunit P45 family protein, putative [Entamoeba histolytica HM-1:IMSS]
(389 aa)

Score: 276 bits (706), Expect: 1.08058e-72
Length: 316, Idn/Pos/Gap = 140/207/0 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           VV  S+  T F+ I   ++   L+PG  V  +K S  +++ LP E D+ ++     E P 
Sbjct:  73 VVTLSSGTTQFVRILSTINRELLKPGTSVAHHKQSNALVDVLPPEADSAIRILSKGETPN 132

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG D Q +E+ EAV LP+T   L++++GI PP+G L+YGPPGTGKT+LA+A A 
Sbjct: 133 VTYADIGGCDIQKQEIREAVELPLTQSELYKQIGIDPPRGCLLYGPPGTGKTMLAKAVAH 192

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+   Q ++G+G R+VRD F LA++ APSI+FIDE+D+I TKR D+    
Sbjct: 193 HTSASFIQIVGSEFAQQYLGEGPRMVRDVFRLARENAPSIVFIDEVDSIATKRHDAQNGA 252

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELL Q+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 253 DREVQRVLLELLTQMDGFDQTTNVKVIMATNRADSLDPALLRPGRLDRKIEFPLPDRRQK 312

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I ++ + KMN+  ++  E+ A   D  + A + ++C EAGM A+R +R +++  DF  
Sbjct: 313 RLIFQVLTSKMNLSKEIDLEDYASRPDKISGAEIASICQEAGMHAVRKNRYIILPADFEK 372

Query: 476 GIAAVQAKKKMSLNYY 491
               V  K+  ++++Y
Sbjct: 373 AYKKVVRKQTQAMDFY 388

ref|ZP_00297990.1| COG1222: ATP-dependent 26S proteasome regulatory subunit [Methanosarcina barkeri str. fusaro]
(431 aa)

Score: 276 bits (705), Expect: 1.33121e-72
Length: 306, Idn/Pos/Gap = 141/210/0 (46%/68%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           ++V++S      + +   +D  +L PG  V +N+ +  I E +P   +  V A EV E  
Sbjct: 106 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVLESV 165

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
             D+  IGGLD+QI+E+ EAV LP+     F R+GI PPKGVL+YG PGTGKTLLA+A A
Sbjct: 166 EVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIDPPKGVLLYGLPGTGKTLLAKAVA 225

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T ATF+++ G+ LVQ +IGDG++LVR+ F +A+KKAPSIIFIDELD+I  +R +    
Sbjct: 226 HRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG 285

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
            DRE QRT+++LL ++DGFD+  ++R++AATNRPD+LD A++R GR DR +  P P   A
Sbjct: 286 ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGVEA 345

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL+IH  KM +  D+ ++ LA++T+  + A LKA+  EAGM A+R +++++  EDF+
Sbjct: 346 RGKILKIHCGKMTLAGDIDFKRLAKATEGMSGADLKAIATEAGMFAVRKNKELIEMEDFL 405

Query: 475 DGIAAV 480
           + +  V
Sbjct: 406 EAVDKV 411

emb|CAH02796.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_451208.1| unnamed protein product [Kluyveromyces lactis]
(404 aa)

Score: 276 bits (705), Expect: 1.34236e-72
Length: 309, Idn/Pos/Gap = 146/203/0 (47%/65%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   ++V +L+    V +  DSY + + L  + D  V    V++ P
Sbjct:  83 VLVKVQPEGKYIVDVAKDINVKDLKVSQRVCLKSDSYQLHKVLENKVDPLVSLMMVEKVP 142

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGL KQI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A
Sbjct: 143 DSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 202

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T   F++++G  LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 203 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSGG 262

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+ + +++++ ATNR DILD AL+R GR+DRKIEFP P  AA
Sbjct: 263 GDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPTVAA 322

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  ILRIHSRKMN+   ++  ++A   +  + A +K VC EAGM ALR  R  V  EDF 
Sbjct: 323 RTEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 382

Query: 475 DGIAAVQAK 483
             +A V  K
Sbjct: 383 LAVAKVMNK 391

gb|EAA01092.2| ENSANGP00000017473 [Anopheles gambiae str. PEST]
ref|XP_321726.2| ENSANGP00000017473 [Anopheles gambiae str. PEST]
(398 aa)

Score: 276 bits (705), Expect: 1.52133e-72
Length: 294, Idn/Pos/Gap = 142/198/0 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+ G  V ++  +  I+  LP E D  V     ++     ++ IGGL +QI E+ 
Sbjct:  96 LDKTKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGEVTYSAIGGLSEQIRELR 155

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  LF RVGI PPKG L+YGPPGTGKTLLARA A+Q  A FLK+  +++V  
Sbjct: 156 EVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 215

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 216 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 275

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  IL+IH+  +  H D+
Sbjct: 276 FDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAAPIAKHGDI 335

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D+FN A L+ VC EAG+ A+RA+R+ VI EDF+  +  V   K++
Sbjct: 336 DYEAVVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVADNKRL 389

emb|CAG81122.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_502931.1| hypothetical protein [Yarrowia lipolytica]
(406 aa)

Score: 275 bits (704), Expect: 1.76787e-72
Length: 316, Idn/Pos/Gap = 148/210/3 (46%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D+ ++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  82 VLVKVHPEGKYVVDIAPDLDIKKITPSLRVCLRSDSYTLHQILPNKVDPLVSLMMVEKVP 141

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLD+QI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A
Sbjct: 142 DSTYDMVGGLDQQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 201

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS--- 351
             T+  F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +S   
Sbjct: 202 HHTECKFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSARTESGGG 261

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
              GD E QRTMLELLNQLDGF+ + +++++ ATNR DILD AL+R GR+DRKIEFP P 
Sbjct: 262 GGGGDSEVQRTMLELLNQLDGFESSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPT 321

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHE 471
             ARA ILRIHSR+MN+   +  +++A   +  + A +K VC EAGM ALR  R  V  E
Sbjct: 322 VEARADILRIHSRRMNLTRGIDLKKIAEKMNGCSGAEVKGVCTEAGMYALRERRIHVTQE 381

Query: 472 DFIDGIAAVQAKKKMS 487
           DF   +A V ++   S
Sbjct: 382 DFELAVAKVMSRNDAS 397

gb|EAL65185.1| hypothetical protein DDB0186051 [Dictyostelium discoideum]
(393 aa)

Score: 275 bits (704), Expect: 1.81268e-72
Length: 289, Idn/Pos/Gap = 144/194/0 (49%/67%/0%)

Query: 198 LRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVL 257
           L PG  V ++  +  IL+ LP E D  +     +   +  + +IGGL  QI E+ E V L
Sbjct:  96 LVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVEL 155

Query: 258 PMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDG 317
           P+    LF RVGIK PKGVL+YGPPGTGKTLLARA A+  +A FLK+  +++V  +IG+ 
Sbjct: 156 PLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGES 215

Query: 318 ARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQND 377
           AR++R+ F  A+   P +IF+DE+DAIG +RF    S DRE QRT++ELLNQ+DGFD   
Sbjct: 216 ARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLS 275

Query: 378 DVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEEL 437
            V+++ ATNRPD+LD AL+R GRLDRKIE P P+EA R  +L+IH+  +  H DV YE +
Sbjct: 276 KVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAI 335

Query: 438 ARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           A+  D FNAA L+ VC EAGM A+RA+R  V+ EDF+  +   Q  KK+
Sbjct: 336 AKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKL 384

gb|AAV48212.1| proteasome-activating nucleotidase 2 [Haloarcula marismortui ATCC 43049]
ref|YP_137918.1| proteasome-activating nucleotidase 2 [Haloarcula marismortui ATCC 43049]
(404 aa)

Score: 275 bits (704), Expect: 1.8742e-72
Length: 288, Idn/Pos/Gap = 148/205/1 (51%/71%/0%)

Query: 197 ELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVV 256
           EL P D V VN +S  I+++L +E D R +  +VD+ P   FADIGG+++Q+EEV E V 
Sbjct: 107 ELEPDDRVAVN-NSLSIVKQLDDETDVRARVMQVDQSPDVTFADIGGIEEQMEEVRETVE 165

Query: 257 LPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGD 316
           +P+    +FE VGI PP GVL++GPPGTGKT+LA+A A +T ATF+K+AG+ LV  FIG+
Sbjct: 166 MPLKSPEMFEDVGIDPPSGVLLHGPPGTGKTMLAKAVANETDATFIKMAGSELVHKFIGE 225

Query: 317 GARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQN 376
           GA+LVRD F LA+++ P+++FIDE+DAI  KR +S  SGD E QRTM++LL+++DGFD  
Sbjct: 226 GAKLVRDLFELARQEEPAVVFIDEIDAIAAKRTESKTSGDAEVQRTMMQLLSEMDGFDDR 285

Query: 377 DDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEE 436
            D+R++AATNR D+LD A++R GR DR IE P+PD   R +I +IH+R MNV  DV +E 
Sbjct: 286 GDIRIIAATNRFDMLDRAILRPGRFDRLIEVPNPDLEGRKQIFQIHTRSMNVADDVDFEA 345

Query: 437 LARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKK 484
           LA    D + A +KA+C EAGM A+R DR  V   DF +    +Q ++
Sbjct: 346 LAEDIQDASGADVKAICTEAGMFAIRDDRTEVTMADFHNAWEKIQQEE 393

ref|NP_649938.1| CG9475-PA, isoform A [Drosophila melanogaster]
gb|AAF54440.1| CG9475-PA, isoform A [Drosophila melanogaster]
(421 aa)

Score: 275 bits (703), Expect: 2.07157e-72
Length: 333, Idn/Pos/Gap = 143/210/16 (42%/63%/4%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ +   +D  +L+P   VG++K S  +++ +P E D+ +     DE+P 
Sbjct:  89 IVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPD 148

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG----------------IKPPKGVLMY 279
             ++DIGGLD Q +E+ EAV LP+TH  L++++G                I PP+GVL++
Sbjct: 149 ISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGGYSQYQKTISTNSLPGIDPPRGVLLF 208

Query: 280 GPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFID 339
           GPPG GKT+LA+A A  T A+F+++ G+  VQ ++G+G R+VRD F LAK+ +PSIIFID
Sbjct: 209 GPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFID 268

Query: 340 ELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSG 399
           E+DAI TKRFD+    DRE QR +LELLNQ+DGFD+  +++V+ ATNR D LD AL+R G
Sbjct: 269 EIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPG 328

Query: 400 RLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMA 459
           RLDRKIE P PD   +  +    + KMNV  DV  E++    D  + A + A+C EAGM 
Sbjct: 329 RLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMH 388

Query: 460 ALRADRKVVIHEDFIDGIAAVQAKKKMSLNYYA 492
           A+R +R VV  +DF  G      K +    +Y+
Sbjct: 389 AVRENRYVVNAKDFEKGYKTSVRKDEAQHEFYS 421

ref|XP_537447.1| PREDICTED: similar to Psmc6 protein [Canis familiaris]
(407 aa)

Score: 275 bits (703), Expect: 2.17792e-72
Length: 298, Idn/Pos/Gap = 144/197/4 (48%/66%/1%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct: 101 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 160

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG----TS 308
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+ G    +S
Sbjct: 161 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVKGRVVSSS 220

Query: 309 LVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLN 368
           +V  +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLN
Sbjct: 221 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 280

Query: 369 QLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNV 428
           Q+DGFD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  
Sbjct: 281 QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITK 340

Query: 429 HPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           H ++ YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 341 HGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 398

gb|AAB88187.1| similar to 26S proteasome subunit p45 [Homo sapiens]
(280 aa)

Score: 275 bits (703), Expect: 2.34776e-72
Length: 270, Idn/Pos/Gap = 145/189/3 (53%/70%/1%)

Query: 222 DARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGP 281
           D  V    V++ P   +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGP
Sbjct:   6 DPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGP  65

Query: 282 PGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDEL 341
           PGTGKTLLARA A  T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+
Sbjct:  66 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEI 125

Query: 342 DAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRL 401
           D+IG+ R +    GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+
Sbjct: 126 DSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRI 185

Query: 402 DRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAAL 461
           DRKIEFP P+E AR  IL+IHSRKMN+   ++  ++A      + A +K VC EAGM AL
Sbjct: 186 DRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYAL 245

Query: 462 RADRKVVIHEDFIDGIAAVQAK---KKMSL 488
           R  R  V  EDF   +A V  K   K MS+
Sbjct: 246 RERRVHVTQEDFEMAVAKVMQKDSEKNMSI 275

emb|CAE56275.1| Hypothetical protein CBG23920 [Caenorhabditis briggsae]
(269 aa)

Score: 275 bits (703), Expect: 2.36743e-72
Length: 262, Idn/Pos/Gap = 142/190/3 (54%/72%/1%)

Query: 230 VDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLL 289
           V++ P   +  +GGLDKQI+E+ E + LP+ H  LF+ +GI  PKGVL+YGPPGTGKTLL
Sbjct:   3 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL  62

Query: 290 ARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRF 349
           ARA A  T+ TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R 
Sbjct:  63 ARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRV 122

Query: 350 DSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH 409
           +    GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP 
Sbjct: 123 EGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPA 182

Query: 410 PDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVI 469
           PDE ARA+IL+IHSRKMN+   +  +++A      + A +K+VC EAGM ALR  R  V 
Sbjct: 183 PDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVT 242

Query: 470 HEDFIDGIAAVQAK---KKMSL 488
            EDF   +  V  K   K MS+
Sbjct: 243 QEDFEMAVGKVMQKDSDKNMSV 264

gb|AAL48804.1| RE23388p [Drosophila melanogaster]
(397 aa)

Score: 275 bits (702), Expect: 2.72822e-72
Length: 294, Idn/Pos/Gap = 142/197/0 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+ G  V ++  +  I+  LP E D  V     ++     ++ IGGL  QI E+ 
Sbjct:  95 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELR 154

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  LF RVGI PPKG L+YGPPGTGKTLLARA A+Q  A FLK+  +++V  
Sbjct: 155 EVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 214

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 215 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 274

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  IL+IH+ K+  H ++
Sbjct: 275 FDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEI 334

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D+FN A L+ VC EAG+ A+RA+R+ VI  DF+  +  V   KK+
Sbjct: 335 DYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKL 388

gb|AAB70326.2| Proteasome regulatory particle, atpase-like protein 4, isoform a [Caenorhabditis elegans]
sp|O17071|PRS10_CAEEL Probable 26S protease regulatory subunit S10B
ref|NP_493644.1| proteasome Regulatory Particle, ATPase-like, S10b (rpt-4) [Caenorhabditis elegans]
(406 aa)

Score: 275 bits (702), Expect: 2.72822e-72
Length: 294, Idn/Pos/Gap = 140/199/0 (47%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           ++  EL+ G  V ++  +  I+ +LP E D  V     ++     ++D+GGL +QI E+ 
Sbjct: 104 INKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELR 163

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+ +  LF+RVGI PPKG L++GPPGTGKTLLARA A+Q    FLK+  +++V  
Sbjct: 164 EVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK 223

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ AR++R+ F  A+   P I+F+DE+DAIG +RF    S DRE QRT++ELLNQLDG
Sbjct: 224 YIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 283

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+V+ ATNRPD LD AL+R GRLDRKIE   P+E +R  IL+IHS K+  H ++
Sbjct: 284 FDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEI 343

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            +E + + +D F+AA L+ VC EAGM A+RA+R+ VI EDF+  +  V   K++
Sbjct: 344 DFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRL 397

dbj|BAB09203.1| 26S proteasome AAA-ATPase subunit RPT4a [Arabidopsis thaliana]
gb|AAL77741.1| AT5g43010/MBD2_21 [Arabidopsis thaliana]
ref|NP_199115.1| 26S proteasome AAA-ATPase subunit (RPT4a) [Arabidopsis thaliana]
gb|AAF22524.1| 26S proteasome AAA-ATPase subunit RPT4a [Arabidopsis thaliana]
gb|AAK50085.1| AT5g43010/MBD2_21 [Arabidopsis thaliana]
(399 aa)

Score: 275 bits (702), Expect: 2.96562e-72
Length: 337, Idn/Pos/Gap = 149/211/0 (44%/62%/0%)

Query: 150 EDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           EDDL   +       E      +  ++VK S+     +     VD  +L  G  V ++  
Sbjct:  50 EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMT 109

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           +  I+  LP E D  V     ++     ++ +GGL  QI E+ E++ LP+ +  LF RVG
Sbjct: 110 TLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVG 169

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
           IKPPKGVL+YGPPGTGKTLLARA A+   A FLK+  ++++  +IG+ ARL+R+ F  A+
Sbjct: 170 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229

Query: 330 KKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
           +  P IIF+DE+DAIG +RF    S DRE QRT++ELLNQLDGFD    V+++ ATNRPD
Sbjct: 230 EHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPD 289

Query: 390 ILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAML 449
           +LD AL+R GRLDRKIE P P+E +R  IL+IH+  +  H ++ YE + +  + FN A L
Sbjct: 290 VLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADL 349

Query: 450 KAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           + +C EAGM A+RA+R  VIHEDF+  +  +   KK+
Sbjct: 350 RNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKL 386

pir||T39558 26S proteinase regulatory subunit 7 - fission yeast  (Schizosaccharomyces pombe)
(440 aa)

Score: 275 bits (702), Expect: 3.1969e-72
Length: 316, Idn/Pos/Gap = 143/203/0 (45%/64%/0%)

Query: 165 ESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDAR 224
           E++ + +  A V+         + +   V  +++  G  VG +++ Y I   LP + D  
Sbjct: 107 ENEQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPS 166

Query: 225 VKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGT 284
           V   +V+E+P   + D+GG  +QIE + E V LP+     F ++GI PPKG+++YGPPGT
Sbjct: 167 VTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGT 226

Query: 285 GKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAI 344
           GKTL ARA A +T ATF+++ G+ LVQ ++G+GAR+VR+ F +A+ K   IIF DE+DAI
Sbjct: 227 GKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAI 286

Query: 345 GTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRK 404
           G  RFD    GD E QRTMLEL+ QLDGFD   +++VL ATNRP+ LD ALMR GR+DRK
Sbjct: 287 GGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRK 346

Query: 405 IEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRAD 464
           +EF  PD   RA ILRIH++ M +  D+ +E +AR       A L++VC EAGM A+RA 
Sbjct: 347 VEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRAR 406

Query: 465 RKVVIHEDFIDGIAAV 480
           R+V   +DF+D +  V
Sbjct: 407 RRVATEKDFLDAVQKV 422

emb|CAA16915.2| SPBC16C6.07c [Schizosaccharomyces pombe]
ref|NP_596805.1| 26s protease regulatory subunit 7 homolog [Schizosaccharomyces pombe]
sp|O42931|PRS7_SCHPO 26S protease regulatory subunit 7 homolog
(438 aa)

Score: 275 bits (702), Expect: 3.1969e-72
Length: 316, Idn/Pos/Gap = 143/203/0 (45%/64%/0%)

Query: 165 ESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDAR 224
           E++ + +  A V+         + +   V  +++  G  VG +++ Y I   LP + D  
Sbjct: 105 ENEQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPS 164

Query: 225 VKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGT 284
           V   +V+E+P   + D+GG  +QIE + E V LP+     F ++GI PPKG+++YGPPGT
Sbjct: 165 VTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGT 224

Query: 285 GKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAI 344
           GKTL ARA A +T ATF+++ G+ LVQ ++G+GAR+VR+ F +A+ K   IIF DE+DAI
Sbjct: 225 GKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAI 284

Query: 345 GTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRK 404
           G  RFD    GD E QRTMLEL+ QLDGFD   +++VL ATNRP+ LD ALMR GR+DRK
Sbjct: 285 GGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRK 344

Query: 405 IEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRAD 464
           +EF  PD   RA ILRIH++ M +  D+ +E +AR       A L++VC EAGM A+RA 
Sbjct: 345 VEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRAR 404

Query: 465 RKVVIHEDFIDGIAAV 480
           R+V   +DF+D +  V
Sbjct: 405 RRVATEKDFLDAVQKV 420

ref|NP_702786.1| 26s proteasome aaa-ATPase subunit Rpt3, putative [Plasmodium falciparum 3D7]
emb|CAD49173.1| 26s proteasome aaa-ATPase subunit Rpt3, putative [Plasmodium falciparum 3D7]
(392 aa)

Score: 274 bits (701), Expect: 3.74609e-72
Length: 316, Idn/Pos/Gap = 142/208/0 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++     ++ I   ++  +L+P   V +++ S+ I+  LP E D+ ++  ++ ERP 
Sbjct:  75 IVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPN 134

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             + D+GGLD Q +E+ EAV LP+T   L+E++GI+PP G+L+YGPPGTGKT+L +A A 
Sbjct: 135 VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +T+ TF+ + G+  VQ ++G+G R+VRD F LA++ +PSIIFIDE+DAI TKRFD+    
Sbjct: 195 ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGA 254

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFD++ +V+V+ ATNR D LD AL+R GRLDRKIEFP PD   +
Sbjct: 255 DREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQK 314

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +    KMNV  DV+ E     TD  +AA + A+  EAGM A+R +R ++   DF  
Sbjct: 315 RLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQ 374

Query: 476 GIAAVQAKKKMSLNYY 491
           G      K+     +Y
Sbjct: 375 GYRTHVRKQLRDYEFY 390

dbj|BAC23035.1| 26S proteasome AAA-ATPase subunit RPT4a [Solanum tuberosum]
(398 aa)

Score: 274 bits (701), Expect: 4.46349e-72
Length: 340, Idn/Pos/Gap = 151/211/0 (44%/62%/0%)

Query: 147 ADHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGV 206
           A  EDDL   +       E      +  ++VK S+     +     VD  +L  G  V +
Sbjct:  46 AKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVL 105

Query: 207 NKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFE 266
           +  +  I+  LP E D  V     ++     ++ +GGL  QI E+ E++ LP+ +  LF 
Sbjct: 106 DMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFL 165

Query: 267 RVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFA 326
           RVGIKPPKGVL+YGPPGTGKTLLARA A+   A FLK+  ++++  +IG+ ARL+R+ F 
Sbjct: 166 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFN 225

Query: 327 LAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATN 386
            A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQLDGFDQ   V+++ ATN
Sbjct: 226 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATN 285

Query: 387 RPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNA 446
           RPD+LD AL+R GRLDRKIE P P+E +R  IL+IH+  +  H ++ YE   +  + FN 
Sbjct: 286 RPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAAIKLAEGFNG 345

Query: 447 AMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           A ++ VC EAGM A+RA+R  VIHEDF+  +  +   KK+
Sbjct: 346 ADMRNVCTEAGMFAIRAERDYVIHEDFMKAVRKLNEAKKL 385

dbj|BAB29293.1| unnamed protein product [Mus musculus]
(389 aa)

Score: 274 bits (700), Expect: 5.45308e-72
Length: 294, Idn/Pos/Gap = 140/194/0 (47%/65%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI ++ 
Sbjct:  87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRDLR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 147 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F   +   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 207 YIGESARLIREMFNYVRDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 266

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATN PD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 267 FDTLHRVKMIMATNSPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 326

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 327 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380

gb|AAT12385.1| 26S proteasome regulatory subunit T1 [Antonospora locustae]
(412 aa)

Score: 273 bits (699), Expect: 6.02734e-72
Length: 283, Idn/Pos/Gap = 140/193/2 (49%/68%/0%)

Query: 198 LRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVL 257
           +  G  VGV++  Y I+  LP + DA V   +V+ERP   + DIGG  ++IE++ E V +
Sbjct: 115 IEEGMRVGVDRAKYSIMMPLPRKIDASVTLMQVEERPDITYNDIGGCKEEIEKIREVVEM 174

Query: 258 PMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDG 317
           P+ +   F  +GI PPKGVL+YGPPGTGKTLLARA A +T A F+++ G+ LVQ ++G+G
Sbjct: 175 PLLNPEKFINLGIDPPKGVLLYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEG 234

Query: 318 ARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQND 377
           AR+VR+ F LAK K  +IIF DE+DA G  RF+   SG+ E QRTMLEL+NQLDGFD   
Sbjct: 235 ARMVREIFELAKSKKAAIIFFDEVDAFGGTRFED--SGENEVQRTMLELINQLDGFDSRG 292

Query: 378 DVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEEL 437
           +++VL ATNRPD L  AL+R GRLDRK+EF  PD   R +IL+IH++ M+V  ++ Y+ +
Sbjct: 293 NIKVLMATNRPDTLHPALLRPGRLDRKVEFGLPDAEGRTQILKIHAKTMSVEKNIRYDLI 352

Query: 438 ARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
           AR   +   A L++VC EAGM A+R  RK+    DF+  +  V
Sbjct: 353 ARMCPNSTGAELRSVCTEAGMFAIRERRKIATENDFMAAVDKV 395

gb|AAV58871.1| Proteasome regulatory particle, atpase-like protein 4, isoform b [Caenorhabditis elegans]
pir||T32268 hypothetical protein F23F1.8 - Caenorhabditis elegans
(398 aa)

Score: 273 bits (699), Expect: 6.18012e-72
Length: 294, Idn/Pos/Gap = 140/199/0 (47%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           ++  EL+ G  V ++  +  I+ +LP E D  V     ++     ++D+GGL +QI E+ 
Sbjct:  96 INKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELR 155

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+ +  LF+RVGI PPKG L++GPPGTGKTLLARA A+Q    FLK+  +++V  
Sbjct: 156 EVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK 215

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ AR++R+ F  A+   P I+F+DE+DAIG +RF    S DRE QRT++ELLNQLDG
Sbjct: 216 YIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 275

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+V+ ATNRPD LD AL+R GRLDRKIE   P+E +R  IL+IHS K+  H ++
Sbjct: 276 FDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEI 335

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            +E + + +D F+AA L+ VC EAGM A+RA+R+ VI EDF+  +  V   K++
Sbjct: 336 DFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRL 389

emb|CAE62825.1| Hypothetical protein CBG07004 [Caenorhabditis briggsae]
(398 aa)

Score: 273 bits (699), Expect: 6.28411e-72
Length: 294, Idn/Pos/Gap = 140/198/0 (47%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           ++  EL+ G  V ++  +  I+ +LP E D  V     ++     ++D+GGL +QI E+ 
Sbjct:  96 INKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELR 155

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+ +  LF RVGI PPKG L++GPPGTGKTLLARA A+Q    FLK+  +++V  
Sbjct: 156 EVVELPLINPELFRRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK 215

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ AR++R+ F  A+   P I+F+DE+DAIG +RF    S DRE QRT++ELLNQLDG
Sbjct: 216 YIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 275

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+V+ ATNRPD LD AL+R GRLDRKIE   P+E +R  IL+IHS K+  H ++
Sbjct: 276 FDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEI 335

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            +E + + +D F+AA L+ VC EAGM A+RA+R+ VI EDF+  +  V   K++
Sbjct: 336 DFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRL 389

ref|NP_036004.1| proteasome 26S  ATPase subunit 4 [Mus musculus]
dbj|BAB16348.1| proteasomal ATPase [Mus musculus]
sp|P54775|PRS6B_MOUSE 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7) (CIP21)
gb|AAA88243.1| ATPase
(418 aa)

Score: 273 bits (699), Expect: 6.66208e-72
Length: 325, Idn/Pos/Gap = 146/207/1 (44%/63%/0%)

Query: 167 DANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVK 226
           +A  Q+ A+V  T T    ++ +   +D   L+P   V ++K S  +++ LP   D+ + 
Sbjct:  94 EAVDQNTAIVAST-TGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIM 152

Query: 227 AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
               D++P   +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GK
Sbjct: 153 MLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGK 212

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           T+LA+A A  T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI T
Sbjct: 213 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
           KRFD+    DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R GRLDRKIE
Sbjct: 273 KRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIE 332

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           FP PD   +  I    + KMN+  +V  E+     D  + A + ++C   GM A+R    
Sbjct: 333 FPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAY 392

Query: 467 VVIHEDFIDGIAAVQAKKKMSLNYY 491
           +V+ +DF      V  K +    +Y
Sbjct: 393 IVLAKDFEKAYKTVIKKDEQEHEFY 417

gb|EAL49331.1| 26s proteasome subunit P45 family protein, putative [Entamoeba histolytica HM-1:IMSS]
(391 aa)

Score: 273 bits (699), Expect: 7.61356e-72
Length: 294, Idn/Pos/Gap = 139/192/0 (47%/65%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D  ++  G  V ++  +  I++ LP E    V +  V+      + DIGGL  Q+ E+ 
Sbjct:  89 IDKKKITQGTRVALDVSTNTIMKILPREVHPAVYSMTVESPGKVKYEDIGGLRNQMREIR 148

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LPMT+  LFERVG+K PKGVL+YGPPGTGKTLLARA A+  +  FLK+  + +V  
Sbjct: 149 EVIELPMTNPELFERVGVKAPKGVLLYGPPGTGKTLLARALASNLECHFLKVVASGIVDK 208

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+ ARL+R+ FA A++  P +IF+DE+DAI  KR       DRE QRT++ELL Q+DG
Sbjct: 209 YLGESARLIREMFAYAREHQPCVIFMDEIDAIAGKRIAEGIHSDREIQRTLMELLAQMDG 268

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           F++   V+++ ATNRPD+LD ALMR GRLDRKIE   P++  R  IL+IHS+KMN+  +V
Sbjct: 269 FNEISKVKIIMATNRPDVLDPALMRPGRLDRKIEISLPNDQGRIEILKIHSKKMNIQEEV 328

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + T+ FN A L+ VC EAGM A+R DR   I EDF   I      KK+
Sbjct: 329 DYEAMGKLTEGFNGADLRNVCTEAGMFAIRDDRDYCIEEDFFKAIRKQAEAKKL 382

ref|ZP_00147843.2| COG1222: ATP-dependent 26S proteasome regulatory subunit [Methanococcoides burtonii DSM 6242]
(426 aa)

Score: 273 bits (698), Expect: 7.93791e-72
Length: 306, Idn/Pos/Gap = 144/206/7 (47%/67%/2%)

Query: 192 LVDVSE-------LRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGL 244
           LV+VS+       L PG  VG+N+ +  +++ +PE  +  + A EV +    D++ +GGL
Sbjct: 115 LVNVSQDFEDDDLLVPGARVGLNQQTLAVVDIIPESDEPLITAMEVIDSQEVDYSQVGGL 174

Query: 245 DKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKL 304
           D+QI E+ E+V LP+T    F+R+GI PPKGVL++GPPGTGKTLLA+A A +T ATF+++
Sbjct: 175 DQQIREISESVELPITKPEAFKRIGITPPKGVLLFGPPGTGKTLLAKAVAHRTNATFIRV 234

Query: 305 AGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTML 364
            G+ LVQ +IGDGA+LVRD F +A+KKAP+IIFIDELDAI   R       DRE QRT++
Sbjct: 235 VGSELVQKYIGDGAKLVRDIFEMARKKAPAIIFIDELDAIAATRLGDTNGADREVQRTLM 294

Query: 365 ELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSR 424
           +LL ++DGFD   DVR++AATNRPD+LD A++R GR DR IE P PD+  R  I  IH  
Sbjct: 295 QLLAEMDGFDNRGDVRIIAATNRPDVLDPAIVRPGRFDRIIEIPLPDQDGRETIFLIHMD 354

Query: 425 KMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKK 484
            +N+  DV  ++LA  T+  + A + A+ +EAGM A+R D   +   D +D +  V   K
Sbjct: 355 MLNIGSDVDVKKLASLTEGASGADIGAIVMEAGMLAVRNDSDHIGMSDLLDAVTKVMVPK 414

Query: 485 KMSLNY 490
           + +L++
Sbjct: 415 ENNLDH 420

gb|EAA22057.1| 26s protease regulatory subunit s10b (p44) (conserved atpase domain protein 44). [thirteen-lined ground squirrel] [Plasmodium yoelii yoelii]
(393 aa)

Score: 273 bits (698), Expect: 9.07161e-72
Length: 317, Idn/Pos/Gap = 145/202/6 (45%/63%/1%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     +     ++ S+L  G  V ++  +  ++++LP E D  V     D    
Sbjct:  68 IVKASSGPRYVVGCKSKINKSKLEIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKG 127

Query: 236 ED------FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLL 289
           E+      +  IGGL +QI ++ E V LP+ +  LF+RVGIK PKGVL+YGPPGTGKTLL
Sbjct: 128 ENSTNKVNYNQIGGLSEQIRQMREVVELPILNPFLFKRVGIKTPKGVLLYGPPGTGKTLL 187

Query: 290 ARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRF 349
           ARA A+     F+++  +S+V  +IG+ AR++R+ F  AK+  P IIF+DE+DAIG +RF
Sbjct: 188 ARAMASNINCNFMRIVVSSIVDKYIGESARIIREMFTYAKEHQPCIIFMDEIDAIGGRRF 247

Query: 350 DSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH 409
               S DRE QRT++ELLN LDGF++  +V+++ ATNRPD+LD AL+R GRLDRKIE P 
Sbjct: 248 SQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPL 307

Query: 410 PDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVI 469
           P+E AR  IL+IH+ KM    D+ YE + R  + FN A L+ VC EAGM A+RA R  VI
Sbjct: 308 PNETARIEILKIHANKMTKMGDIDYESVCRLCEGFNGADLRNVCTEAGMFAIRAMRDYVI 367

Query: 470 HEDFIDGIAAVQAKKKM 486
            EDF      +   KK+
Sbjct: 368 EEDFYKAARKINEAKKL 384

gb|AAH25134.1| Psmc6 protein [Mus musculus]
(293 aa)

Score: 273 bits (697), Expect: 1.18479e-71
Length: 283, Idn/Pos/Gap = 138/188/0 (48%/66%/0%)

Query: 204 VGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKH 263
           V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ E + LP+T+  
Sbjct:   2 VALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPE  61

Query: 264 LFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRD 323
           LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  +IG+ ARL+R+
Sbjct:  62 LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIRE 121

Query: 324 AFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLA 383
            F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DGFD    V+++ 
Sbjct: 122 MFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 181

Query: 384 ATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDD 443
           ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++ YE + + +D 
Sbjct: 182 ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDG 241

Query: 444 FNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 242 FNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 284

ref|NP_704963.1| 26S proteasome regulatory subunit, putative [Plasmodium falciparum 3D7]
emb|CAD52198.1| 26S proteasome regulatory subunit, putative [Plasmodium falciparum 3D7]
(393 aa)

Score: 273 bits (697), Expect: 1.20473e-71
Length: 317, Idn/Pos/Gap = 144/204/6 (45%/64%/1%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     +     ++ S+L  G  V ++  +  ++++LP E D  V     D   +
Sbjct:  68 IVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKS 127

Query: 236 ED------FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLL 289
           E+      +  IGGL +QI ++ E V LP+ + +L++RVGIK PKGVL+YGPPGTGKTLL
Sbjct: 128 ENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLL 187

Query: 290 ARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRF 349
           ARA A+     F+++  +++V  +IG+ AR++R+ F  AK+  P IIF+DE+DAIG +RF
Sbjct: 188 ARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRF 247

Query: 350 DSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH 409
               S DRE QRT++ELLN LDGF++  +V+++ ATNRPD+LD AL+R GRLDRKIE P 
Sbjct: 248 SQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPL 307

Query: 410 PDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVI 469
           P+E AR  IL+IH+ KM    D+ YE + R  D FN A L+ VC EAGM A+RA R  VI
Sbjct: 308 PNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVI 367

Query: 470 HEDFIDGIAAVQAKKKM 486
            EDF      +   KK+
Sbjct: 368 EEDFYKAARKISEGKKL 384

gb|EAK96915.1| likely 26S proteasome regulatory particle ATPase Rpt1p [Candida albicans SC5314]
gb|EAK96864.1| likely 26S proteasome regulatory particle ATPase Rpt1p [Candida albicans SC5314]
(444 aa)

Score: 273 bits (697), Expect: 1.26657e-71
Length: 285, Idn/Pos/Gap = 139/192/0 (48%/67%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           +++  G  VGV++  Y I   LP   D  V    V+E+P   ++D+GG  +QIE++ E V
Sbjct: 143 TDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVV 202

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LP+     F ++GI PPKG+L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ ++G
Sbjct: 203 ELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVG 262

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+ QLDGFD 
Sbjct: 263 EGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDP 322

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++V+ ATNRP+ LD AL+R GR+DRK+EF  PD   RA I RIHS+ M+V  D+ +E
Sbjct: 323 RGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWE 382

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 383 LISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKDFLKAVDKV 427

emb|CAG58891.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_445972.1| unnamed protein product [Candida glabrata]
(472 aa)

Score: 272 bits (696), Expect: 1.39995e-71
Length: 288, Idn/Pos/Gap = 138/192/0 (47%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV++  Y I   LP   D  V    V+E+P   ++D+GG  +QIE++ 
Sbjct: 168 VSPTDIEEGMRVGVDRSKYHIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLR 227

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+     F  +GI PPKG+L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 228 EVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 287

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DA+G  RFD    GD E QRTMLEL+ QLDG
Sbjct: 288 YVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDG 347

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP+ LD AL+R GR+DRK+EF  PD   RA I RIHS+ M+V  ++
Sbjct: 348 FDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERNI 407

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 408 RWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKV 455

emb|CAC27047.1| 26S proteasome AAA-ATPase subunit [Guillardia theta]
ref|NP_113478.1| 26S proteasome AAA-ATPase subunit [Guillardia theta]
pir||A99111 26S proteasome AAA-ATPase subunit [imported] - Guillardia theta nucleomorph
(391 aa)

Score: 272 bits (696), Expect: 1.41168e-71
Length: 312, Idn/Pos/Gap = 141/197/0 (45%/63%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           ++ T      ++ +   VD   L  G+ V ++  S  I+    E  ++ +   ++++  T
Sbjct:  73 IISTPLGSEYYVDVCSFVDYDRLYIGESVQIHHKSLSIIGGFNEISNSLINLGKIEKHST 132

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             F DIGGL+ QI E+ EA+  P     +F  +GI PPKGV++YG PGTGKTLLA+A A+
Sbjct: 133 VTFNDIGGLETQILEIKEAIETPFNKPEIFYNIGIDPPKGVILYGEPGTGKTLLAKAIAS 192

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +TKA F+K+ G+ LVQ F+G+G RLVRD F  A K +P IIF+DE+DAIGT R DS   G
Sbjct: 193 KTKANFIKITGSELVQKFLGEGPRLVRDLFKTAHKLSPCIIFMDEIDAIGTIRTDSHSEG 252

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           ++E QRTMLELLNQLDGF  N +++++ ATNR D LD AL+R GR+DRKIEF  PD+   
Sbjct: 253 EKEVQRTMLELLNQLDGFTTNQNIKIIMATNRIDTLDPALIRPGRIDRKIEFSLPDDRTI 312

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
            +IL +H++KMNV  DV+      S D  + A +KA C EA + AL   R  +I +DF +
Sbjct: 313 NKILTVHTKKMNVGKDVNLISFLTSKDYVSGADIKAFCTEAALIALGKRRIHLIQDDFNE 372

Query: 476 GIAAVQAKKKMS 487
               +  KKK S
Sbjct: 373 AKNYIMKKKKES 384

gb|EAK85470.1| hypothetical protein UM04547.1 [Ustilago maydis 521]
ref|XP_402162.1| hypothetical protein UM04547.1 [Ustilago maydis 521]
(200 aa)

Score: 272 bits (696), Expect: 1.42351e-71
Length: 198, Idn/Pos/Gap = 144/165/0 (72%/83%/0%)

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
           AQT A +LKLAG SLVQMFIGDGA+LVRDAF LAK+KAP+IIFIDELDAIGTKRFDSD+S
Sbjct:   3 AQTNACYLKLAGPSLVQMFIGDGAKLVRDAFELAKEKAPAIIFIDELDAIGTKRFDSDKS  62

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GDRE QRTMLELLNQLDGF  ++ ++V+AATNR DILD AL+RSGRLDRKIEFP P+E A
Sbjct:  63 GDREVQRTMLELLNQLDGFSSDERIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEA 122

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           RARI+ IHSRKM V P+V++EELARSTD+ N A LKAVCVEAGM ALR    ++ HE F 
Sbjct: 123 RARIMEIHSRKMAVGPNVNFEELARSTDEMNGAQLKAVCVEAGMIALREGATILDHEHFH 182

Query: 475 DGIAAVQAKKKMSLNYYA 492
            GI  VQAKKK    Y++
Sbjct: 183 GGIQEVQAKKKNDQFYFS 200

gb|EAL30783.1| GA20215-PA [Drosophila pseudoobscura]
(397 aa)

Score: 272 bits (695), Expect: 1.79814e-71
Length: 311, Idn/Pos/Gap = 139/203/0 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK+S      +     ++ S LR G  V ++  +  I+  LP E D  V     ++   
Sbjct:  78 IVKSSNGPRYIVGCRRQINKSHLRAGTRVALDLTTLTIMRYLPREVDPLVYNMVHEDPGD 137

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
            ++++IGGL +QI ++ E + LP+ +  LF RVGI PPKG L+YGPPGTGKTL+ARA A+
Sbjct: 138 VNYSEIGGLGEQIRQLREVIELPLLNPELFLRVGINPPKGCLLYGPPGTGKTLMARAIAS 197

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           Q  A FLK+  +++V  +IG+ ARL+R+ F+ A+   P IIF+DE+DAIG +RF    S 
Sbjct: 198 QMDANFLKVVSSAIVDKYIGESARLIREMFSYARDHQPCIIFMDEIDAIGGRRFSEGSSA 257

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELLNQ+DGFD    V+++ ATNRPD LD AL+R GRLDRK+E P P+E AR
Sbjct: 258 DREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVAR 317

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             IL+IH+  ++    + YE + + +D FN A L+  C EAG+ ALRA+R+ ++ EDF+ 
Sbjct: 318 MDILKIHAGPLSKQGVIDYEAIVKLSDTFNGADLRNTCTEAGLFALRAEREFILQEDFMK 377

Query: 476 GIAAVQAKKKM 486
            +  +   KK+
Sbjct: 378 AVRKIAGNKKL 388

emb|CAG87864.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_459634.1| unnamed protein product [Debaryomyces hansenii]
(446 aa)

Score: 271 bits (694), Expect: 2.57419e-71
Length: 288, Idn/Pos/Gap = 138/191/0 (47%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV++  Y I   LP   D  V    V+E+P   ++D+GG   QIE++ 
Sbjct: 142 VSPTDIEEGMRVGVDRQKYEIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLR 201

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+     F ++GI PPKG+L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 202 EVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 261

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   I+F DE+DAIG  RFD    GD E QRTMLEL+ QLDG
Sbjct: 262 YVGEGARMVRELFEMARTKKACIVFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDG 321

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP+ LD AL+R GR+DRK+EF  PD   RA I RIHS+ M+   D+
Sbjct: 322 FDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKTMSCEKDI 381

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 382 RWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKDFLKSVEKV 429

emb|CAG80886.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_502698.1| hypothetical protein [Yarrowia lipolytica]
(436 aa)

Score: 271 bits (694), Expect: 2.75188e-71
Length: 288, Idn/Pos/Gap = 139/192/0 (48%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV++  Y I   LP   D  V    V+E+P   ++D+GG  +Q+E++ 
Sbjct: 132 VSPTDIEEGMRVGVDRSKYQIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGSKEQLEKLR 191

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+     F  +GI PPKG+L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 192 EVVELPLLSPERFVNLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 251

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+ QLDG
Sbjct: 252 YVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDG 311

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP+ LD AL+R GR+DRK+EF  PD   RA I RIHS+ M+V  D+
Sbjct: 312 FDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVDRDI 371

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 372 RWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLAAVEKV 419

gb|EAL61170.1| hypothetical protein DDB0216230 [Dictyostelium discoideum]
(403 aa)

Score: 271 bits (693), Expect: 3.30635e-71
Length: 319, Idn/Pos/Gap = 150/210/4 (47%/65%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK +      + I   VD+++L P     +  +SY +   LP + D  V   +V++ P
Sbjct:  81 VLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIP 140

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 141 DSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 200

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD-AIGTKRFDSDR 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D    ++      
Sbjct: 201 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSG 260

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
            GD E QRTMLELLNQLDGF+   +++VL  TNR DILD AL+R GR+DRKIEFP+P +A
Sbjct: 261 GGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDA 320

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            R  IL+IHSRKMN+   ++ ++++   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 321 GRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDF 380

Query: 474 IDGIAAVQAK---KKMSLN 489
              ++ V  K   + MS+N
Sbjct: 381 EMAVSKVMKKDSEQNMSIN 399

gb|AAW26049.1| unknown [Schistosoma japonicum]
(395 aa)

Score: 271 bits (693), Expect: 3.39016e-71
Length: 291, Idn/Pos/Gap = 137/193/0 (47%/66%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           S+L+ G  V ++  +  I+ +LP E D  V     ++  +  +  +GGL  QI E+ E +
Sbjct:  96 SKLKAGTRVALDMTTLTIMRQLPREVDPLVHNMSAEDPGSVSYTSVGGLADQIRELREII 155

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LP+ +  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  + +V  +IG
Sbjct: 156 ELPLMNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDVNFLKVVSSGIVDKYIG 215

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           + ARL+R+ F+ A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DGFD 
Sbjct: 216 ESARLIREMFSYARDHQPCIIFMDEIDAIGGRRFTEGTSADREIQRTLMELLNQMDGFDA 275

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
              V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  +L+IH+  +  H ++ +E
Sbjct: 276 LGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLDVLKIHAAPIAKHGEIDWE 335

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            + + +D FN A L+ VC EAGM A+RA+R   I EDF+  +  +   KK+
Sbjct: 336 AVVKLSDGFNGADLRNVCTEAGMFAIRAERDYTIEEDFMKAVRKIADAKKL 386

emb|CAH95167.1| 26S proteasome regulatory subunit 7, putative [Plasmodium berghei]
(420 aa)

Score: 271 bits (692), Expect: 3.93954e-71
Length: 285, Idn/Pos/Gap = 139/188/0 (48%/65%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           S++  G  VGV++  Y I   LP + D  V    V+E+P   + DIGG  +Q+E++ E V
Sbjct: 119 SDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVV 178

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            +P+     F  +GI PPKGVL+YGPPGTGKTL ARA A +T A F+ + G+ LVQ ++G
Sbjct: 179 EMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVG 238

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GARLVR+ F +AK K   I+FIDE+DAIG  R D    GD E QRTMLE++NQLDGFD 
Sbjct: 239 EGARLVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDN 298

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++V+ ATNRPD LD+AL+R GR+DRKIEF  PD   R  I +IH+  MN+  DV +E
Sbjct: 299 RGNIKVIMATNRPDTLDSALVRPGRIDRKIEFSLPDLEGRTHIFKIHANTMNMSRDVRFE 358

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            LAR   +   + +++VC EAGM A+RA RK +  +D +  I  V
Sbjct: 359 LLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKV 403

gb|AAV38127.1| proteasome-activating nucleotidase B; PanB; AAA subfamily ATPase; triple-A subfamily ATPase [Haloferax volcanii]
(412 aa)

Score: 271 bits (692), Expect: 4.10737e-71
Length: 299, Idn/Pos/Gap = 147/202/1 (49%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           ++ +    Q V       +++ ++ PGD V +N DS+ +   L +E DAR +A EV E P
Sbjct:  89 IIKQHGNNQEVLTEFAPSLNIDDIEPGDRVAIN-DSFAVQTVLDDETDARAQAMEVVESP 147

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           T  + DIGG+D+Q+ EV EAV  P+ +  +F  VGI PP GVL+YGPPGTGKT+LA+A A
Sbjct: 148 TVTYDDIGGIDEQVREVREAVEQPLENPEMFAEVGIDPPSGVLLYGPPGTGKTMLAKAVA 207

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +T A+F+K+AG+ LVQ FIG+GARLVRD F LA ++ P ++FIDE+DA+ +KR DS  S
Sbjct: 208 NETNASFIKMAGSELVQKFIGEGARLVRDLFKLAAEREPVVVFIDEIDAVASKRTDSKTS 267

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTM++LL+++DGFD   D+R++AATNR D+LD A++R GR DR IE P P    
Sbjct: 268 GDAEVQRTMMQLLSEMDGFDDRGDIRIIAATNRFDMLDEAILRPGRFDRLIEVPKPAVEG 327

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           R  IL IH+R MNV  DV  + LA   DD++ A + ++  EAGM A+R  R  V   DF
Sbjct: 328 RRHILDIHTRDMNVADDVDLDALAEELDDYSGADIASLTTEAGMFAIRDGRTEVTGADF 386

emb|CAA11285.1| 26S proteasome regulatory ATPase subunit 10b (S10b) [Manduca sexta]
(396 aa)

Score: 271 bits (692), Expect: 4.24677e-71
Length: 294, Idn/Pos/Gap = 140/196/0 (47%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+ G  V ++  +  I+  LP E D  V     ++     +A IGGL +QI ++ 
Sbjct:  94 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYAAIGGLQEQIRQLR 153

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  LF RVGI PPKG L+YGPPGTGKTLLARA A+Q  A FLK+  +++V  
Sbjct: 154 EVIELPLLNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 213

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 214 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 273

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  IL+IH+  +  H ++
Sbjct: 274 FDSLGQVKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHAAPIAKHGEM 333

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAG+ A+RA+R+ +I ED +  +  V   KK+
Sbjct: 334 DYEAVVKLSDTFNGADLRNVCTEAGLFAIRAEREYIIQEDLMKAVRKVADNKKL 387

emb|CAG99658.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_454571.1| unnamed protein product [Kluyveromyces lactis]
(475 aa)

Score: 271 bits (692), Expect: 4.42769e-71
Length: 288, Idn/Pos/Gap = 138/191/0 (47%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV++  Y I   LP   D  V    V+E+P   ++D+GG  +QIE++ 
Sbjct: 171 VSPTDIEEGMRVGVDRSKYQIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLR 230

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+     F  +GI PPKG+L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 231 EVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 290

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+ QLDG
Sbjct: 291 YVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDG 350

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP+ LD AL+R GR+DRK+EF  PD   RA I RIH++ M+V   +
Sbjct: 351 FDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHTKSMSVERGI 410

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 411 RWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVTTEKDFLKAVEKV 458

emb|CAA81986.1| YTA3 [Saccharomyces cerevisiae]
emb|CAA80470.1| putative ATPase [Saccharomyces cerevisiae]
emb|CAA51973.1| YTA3 [Saccharomyces cerevisiae]
sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog (CIM5 protein) (TAT-binding homolog 3)
ref|NP_012777.1| One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and the E3 ubiquitin-protein ligase Ubr1p [Saccharomyces cerevisiae]
prf||2001430A 26S protease
(467 aa)

Score: 271 bits (692), Expect: 4.53992e-71
Length: 288, Idn/Pos/Gap = 138/190/0 (47%/65%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV++  Y I   LP   D  V    V+E+P   ++D+GG   QIE++ 
Sbjct: 163 VSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLR 222

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+     F  +GI PPKG+L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 223 EVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 282

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DA+G  RFD    GD E QRTMLEL+ QLDG
Sbjct: 283 YVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDG 342

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP+ LD AL+R GR+DRK+EF  PD   RA I RIHS+ M+V   +
Sbjct: 343 FDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGI 402

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+RA RKV   +DF+  +  V
Sbjct: 403 RWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKV 450

sp|P34124|PRS8_DICDI 26S protease regulatory subunit 8 (TAT-binding protein homolog 10)
pir||JN0610 probable transcription factor DdTBP10 - slime mold  (Dictyostelium discoideum) (fragment)
gb|AAA33254.1| HIV1 TAT-binding protein
(389 aa)

Score: 271 bits (692), Expect: 4.81297e-71
Length: 319, Idn/Pos/Gap = 150/210/4 (47%/65%/1%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK +      + I   VD+++L P     +  +SY +   LP + D  V   +V++ P
Sbjct:  67 VLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIP 126

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 127 DSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 186

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD-AIGTKRFDSDR 353
             T  TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D    ++      
Sbjct: 187 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSG 246

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
            GD E QRTMLELLNQLDGF+   +++VL  TNR DILD AL+R GR+DRKIEFP+P +A
Sbjct: 247 GGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDA 306

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            R  IL+IHSRKMN+   ++ ++++   +  + A LKAVC EAGM ALR  R  V  EDF
Sbjct: 307 GRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDF 366

Query: 474 IDGIAAVQAK---KKMSLN 489
              ++ V  K   + MS+N
Sbjct: 367 EMAVSKVMKKDSEQNMSIN 385

ref|XP_489649.1| similar to protease (prosome, macropain) 26S subunit, ATPase 1 [Mus musculus]
(438 aa)

Score: 270 bits (689), Expect: 9.54008e-71
Length: 311, Idn/Pos/Gap = 147/204/13 (47%/65%/4%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V TS     ++ I   VD   L PG  V +N   + +   L ++ D  V   +V++ P 
Sbjct: 106 IVSTSVGSEHYVSILPFVDKDLLEPGCYVLLNHKVHAVTGVLMDDTDPLVTVMKVEKAPQ 165

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E +ADIGGLD QI+E+ ++V LP+TH   +E + IKPPK V++YGPPGTGKTLLA+A A 
Sbjct: 166 ETYADIGGLDNQIQEIKKSVELPLTHPEDYEEMRIKPPKEVILYGPPGTGKTLLAKAVAN 225

Query: 296 QTKATFLKLAGTSLVQMFIGDGA------------RLVRDAFALAKKKAPSIIFIDELDA 343
           QT  TFL++ G+ L+Q ++                +LVR+ F +A++ APSI+FIDE+DA
Sbjct: 226 QTSGTFLRVVGSELIQKYLSVSGWLRAYPEVPKWPKLVRELFQVAEEHAPSIVFIDEIDA 285

Query: 344 IGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDR 403
           IGT+R+DS+  G+RE QRTMLELLNQLDGFD   DV+V  A NR + LD AL+R G +DR
Sbjct: 286 IGTRRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVFMAKNRIETLDPALIRPGPIDR 345

Query: 404 KIEFPHPDEAARARILRIHSRKMN-VHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           KIEFP PDE  + RI +IH+ +M  +  DV+ ++L  + DD + A +KA+C EAG+ ALR
Sbjct: 346 KIEFPLPDEKTKKRIFQIHTSRMTRLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALR 405

Query: 463 ADRKVVIHEDF 473
             R  V +EDF
Sbjct: 406 ECRMKVTNEDF 416

gb|AAS51277.1| ACR050Cp [Ashbya gossypii ATCC 10895]
ref|NP_983453.1| ACR050Cp [Eremothecium gossypii]
(475 aa)

Score: 269 bits (688), Expect: 1.1179e-70
Length: 288, Idn/Pos/Gap = 137/191/0 (47%/66%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           V  +++  G  VGV++  Y I   LP   D  V    V+E+P   ++D+GG  +QIE++ 
Sbjct: 171 VSPTDIEEGMRVGVDRSKYFIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLR 230

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+     F  +GI PPKG+L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ 
Sbjct: 231 EVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQK 290

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           ++G+GAR+VR+ F +A+ K   IIF DE+DAIG  RFD    GD E QRTMLEL+ QLDG
Sbjct: 291 YVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELITQLDG 350

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRP+ LD AL+R GR+DRK+EF  PD   RA I RIH++ M+V   +
Sbjct: 351 FDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHTKSMSVERGI 410

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E ++R   +   A L++VC EAGM A+R+ RKV   +DF+  +  V
Sbjct: 411 RWELISRLCPNSTGAELRSVCTEAGMFAIRSRRKVATEKDFLKAVDKV 458

gb|EAL22733.1| hypothetical protein CNBB1810 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW42019.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_569326.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans JEC21]
(414 aa)

Score: 269 bits (688), Expect: 1.24597e-70
Length: 316, Idn/Pos/Gap = 137/205/0 (43%/64%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T     + I   +D   L+P   V +++ S  +++ LP E D+ +     DE+P 
Sbjct:  98 IVGSTTGSNYVVRILSTLDRELLKPSSSVALHRHSNALVDILPPEADSSIAMLGADEKPD 157

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGGLD Q +E+ EAV LP+  + L+ ++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 158 VKYSDIGGLDSQKQEIREAVELPLVQQDLYRKIGIDPPRGVLLYGPPGTGKTMLVKAVAN 217

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            TKA F+++ G+  VQ ++G+G R+VRD F LA++ +P IIFIDE+DAI TKRFD+    
Sbjct: 218 ATKAAFIRVVGSEFVQKYLGEGPRMVRDVFRLARENSPCIIFIDEVDAIATKRFDAQTGS 277

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR ++ELL Q+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIE P+P    R
Sbjct: 278 DREVQRILIELLTQMDGFDQQTNVKVIMATNRADTLDPALLRPGRLDRKIEMPNPSRRER 337

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +  + KMN+ PDV  E+     D  ++A + ++C  AG+ A+R +R V++  DF +
Sbjct: 338 RLIFQTVTSKMNLGPDVDLEDYVSRPDLLSSAQIASICQAAGLQAVRKNRYVILPIDFEE 397

Query: 476 GIAAVQAKKKMSLNYY 491
              +V  +   +  +Y
Sbjct: 398 AWKSVVKRNDETHEFY 413

emb|CAH83988.1| 26S proteasome regulatory subunit 7, putative [Plasmodium chabaudi]
(295 aa)

Score: 269 bits (687), Expect: 1.66854e-70
Length: 277, Idn/Pos/Gap = 137/184/0 (49%/66%/0%)

Query: 204 VGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKH 263
           VGV++  Y I   LP + D  V    V+E+P   + DIGG  +Q+E++ E V +P+    
Sbjct:   2 VGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPE  61

Query: 264 LFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRD 323
            F  +GI PPKGVL+YGPPGTGKTL ARA A +T A F+ + G+ LVQ ++G+GARLVR+
Sbjct:  62 RFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARLVRE 121

Query: 324 AFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLA 383
            F +AK K   I+FIDE+DAIG  R D    GD E QRTMLE++NQLDGFD   +++V+ 
Sbjct: 122 LFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVIM 181

Query: 384 ATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDD 443
           ATNRPD LD+AL+R GR+DRKIEF  PD   R  I +IH+  MN+  DV +E LAR   +
Sbjct: 182 ATNRPDTLDSALVRPGRIDRKIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPN 241

Query: 444 FNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
              + +++VC EAGM A+RA RK +  +D +  I  V
Sbjct: 242 STGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKV 278

gb|AAS54447.1| AGL043Cp [Ashbya gossypii ATCC 10895]
ref|NP_986623.1| AGL043Cp [Eremothecium gossypii]
(405 aa)

Score: 268 bits (685), Expect: 2.59651e-70
Length: 292, Idn/Pos/Gap = 143/198/1 (48%/67%/0%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           ++V +L+    V +  DSY++ + L  + D  V    V++ P   +  +GGL KQI+E+ 
Sbjct: 101 INVKDLKVSQRVCLKSDSYVLHKVLENKVDPLVSLMMVEKVPDSTYDMVGGLTKQIKEIK 160

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A  T   F++++G  LVQ 
Sbjct: 161 EVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQK 220

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD-SDRSGDRETQRTMLELLNQLD 371
           +IG+G+R+VR+ F +A++ APSIIF+DE+D+IG+ R +     GD E QRTMLELLNQLD
Sbjct: 221 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGGSGGGDSEVQRTMLELLNQLD 280

Query: 372 GFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPD 431
           GF+ + +++++ ATNR DILD AL+R GR+DRKIEFP P  AAR  ILRIHSRKMN+   
Sbjct: 281 GFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPTVAARTEILRIHSRKMNLTRG 340

Query: 432 VSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAK 483
           ++  ++A   +  + A +K VC EAGM ALR  R  V  EDF   +A V  K
Sbjct: 341 INLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVAKVMNK 392

gb|AAM69020.1| 26S protease regulatory subunit [Leishmania major]
ref|NP_859479.1| 26S protease regulatory subunit [Leishmania major]
(396 aa)

Score: 268 bits (685), Expect: 2.96734e-70
Length: 291, Idn/Pos/Gap = 145/198/2 (49%/68%/0%)

Query: 197 ELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTE-DFADIGGLDKQIEEVIEAV 255
           +L+ G  V +   ++ I++ LP E D +V + +      +  F DIGGL  Q+ ++ E +
Sbjct:  97 KLKFGARVALEITTFTIVKVLPREVDPQVYSMQYMSSDKDVSFQDIGGLQPQMRQMREVI 156

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LP+T+  LF RVGI PPKGVL+YGPPGTGKTLLA+A AA   A FLK+  +S+V  +IG
Sbjct: 157 ELPLTNPELFVRVGIAPPKGVLLYGPPGTGKTLLAKAIAANVDAAFLKIVASSIVDKYIG 216

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           + AR++R+ FA A++  P IIFIDE+DAIG+KR +   S DRE QRT++ELLNQ+DGFD+
Sbjct: 217 ESARVIREMFAYAREHEPCIIFIDEVDAIGSKRIEGS-SSDREIQRTLMELLNQMDGFDK 275

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
              V+V+ ATNRPD LDAALMR GRLDRKIE P P+EA R  +LRIHS K+    D+ +E
Sbjct: 276 LGKVKVIMATNRPDTLDAALMRPGRLDRKIEIPLPNEAGRLDVLRIHSAKITKKGDIDFE 335

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            + + ++ FN A L+ VC EAGM A+RA R  V + DF   +  V   K++
Sbjct: 336 SVVKLSEGFNGADLRNVCTEAGMFAIRAGRDYVENSDFNKAVRKVADMKRL 386

sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4
(388 aa)

Score: 268 bits (684), Expect: 3.22555e-70
Length: 337, Idn/Pos/Gap = 148/201/0 (43%/59%/0%)

Query: 150 EDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKD 209
           EDD+   +       E      S   +VK S+     +     VD S L  G  V ++  
Sbjct:  43 EDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMT 102

Query: 210 SYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           +  I+  LP E D  V    +++     FA +GGL++QI E+ E + LP+ +  LF RVG
Sbjct: 103 TLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVG 162

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
           IKPPKGVL+YGPPGTGKTLLARA AA     FLK+  +++V  +IG+ AR++R+ F  AK
Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAK 222

Query: 330 KKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
           +  P +IF+DE+DAIG +RF    S DRE QRT++ELLNQ+DGFD     +++ ATNRPD
Sbjct: 223 EHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPD 282

Query: 390 ILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAML 449
            LD AL+R GRLDRKIE P P+E  R  IL+IH  K++   ++ YE L + TD  N A L
Sbjct: 283 TLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADL 342

Query: 450 KAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           + V  EAG  A++ DR  VI  D +     V   KK+
Sbjct: 343 RNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKL 379

gb|EAK84948.1| hypothetical protein UM03922.1 [Ustilago maydis 521]
ref|XP_401537.1| hypothetical protein UM03922.1 [Ustilago maydis 521]
(288 aa)

Score: 268 bits (684), Expect: 3.59511e-70
Length: 273, Idn/Pos/Gap = 137/183/0 (50%/67%/0%)

Query: 213 ILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKP 272
           I+  LP E D  V    +++     FA IGGL  QI E+ E + LP+ +  LF RVGIKP
Sbjct:   6 IMRILPREVDPLVYNMSMEDPGAASFAGIGGLSDQIRELREVIELPLLNPELFMRVGIKP  65

Query: 273 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKA 332
           PKGVL+YGPPGTGKTLLARA A+  +  FLK+  +++V  +IG+ ARL+R+ F  AK+  
Sbjct:  66 PKGVLLYGPPGTGKTLLARAVASTLETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHE 125

Query: 333 PSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILD 392
           P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DGFD     +V+ ATNRPD LD
Sbjct: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGKTKVIMATNRPDTLD 185

Query: 393 AALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAV 452
            ALMR GR+DRKIE P P+E +R  IL+IH+R +    ++ YE + + +D FN A L+ V
Sbjct: 186 PALMRPGRIDRKIEIPLPNEQSRLEILKIHTRPVAKKEELDYEAIVKLSDGFNGADLRNV 245

Query: 453 CVEAGMAALRADRKVVIHEDFIDGIAAVQAKKK 485
             EAGM A+R DR   + EDF+  +  +Q  K+
Sbjct: 246 ATEAGMFAIRDDRDYCVQEDFMKAVRKLQEAKR 278

emb|CAD98476.1| 26s proteasome ATPase subunit, probable [Cryptosporidium parvum]
gb|EAK90032.1| 26S proteasome regulatory subunit 7 (RPT1)-like. AAA atpase [Cryptosporidium parvum]
gb|EAL35842.1| 26S proteasome ATPase subunit [Cryptosporidium hominis]
(432 aa)

Score: 268 bits (684), Expect: 3.77967e-70
Length: 293, Idn/Pos/Gap = 141/195/1 (48%/66%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           +++  G  VGV++  Y I   LP + D  V    V+++P   + DIGG  +Q+E + E V
Sbjct: 131 TDIEEGMRVGVDRTKYKIQIPLPPKIDPSVAMMTVEDKPDVTYNDIGGAKEQLERLREVV 190

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            +P+ H   F ++GI PPKGVL+YGPPGTGKTL ARA A +T A F+ + G+ LVQ ++G
Sbjct: 191 EMPLLHPERFVQLGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQKYVG 250

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GAR+VR+ F LA+ K   I+FIDE+DAIG  R D    GD E QRTMLE++NQLDGFD 
Sbjct: 251 EGARMVRELFKLARSKKACILFIDEVDAIGGARGDESAHGDHEVQRTMLEIVNQLDGFDA 310

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++VL ATNRPD LD AL+R GRLDRK+EF  PD   R +I RIH++ M++  D+ +E
Sbjct: 311 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFRIHAKVMSMERDIRFE 370

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGI-AAVQAKKKMS 487
            L+R   +   A +++VC EAGM A+RA RK +  +D +D I   V+  KK S
Sbjct: 371 LLSRLCPNCTGADIRSVCTEAGMFAIRARRKSISEKDLLDAINKVVKGYKKFS 423

ref|NP_705015.1| 26S proteasome regulatory subunit 7, putative [Plasmodium falciparum 3D7]
emb|CAD52250.1| 26S proteasome regulatory subunit 7, putative [Plasmodium falciparum 3D7]
(420 aa)

Score: 268 bits (684), Expect: 3.90794e-70
Length: 285, Idn/Pos/Gap = 137/187/0 (48%/65%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           S++  G  V V++  Y I   LP + D  V    V+E+P   + DIGG  +Q+E++ E V
Sbjct: 119 SDIEEGMRVXVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVV 178

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            +P+     F  +GI PPKGVL+YGPPGTGKTL ARA A +T A F+ + G+ LVQ ++G
Sbjct: 179 EMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVG 238

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           +GAR+VR+ F +AK K   I+FIDE+DAIG  R D    GD E QRTMLE++NQLDGFD 
Sbjct: 239 EGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDN 298

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
             +++VL ATNRPD LD+AL+R GR+DR+IEF  PD   R  I +IH+  MN+  DV +E
Sbjct: 299 RGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFE 358

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            LAR   +   + +++VC EAGM A+RA RK +  +D +  I  V
Sbjct: 359 LLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKV 403

gb|EAK81907.1| hypothetical protein UM00833.1 [Ustilago maydis 521]
ref|XP_398448.1| hypothetical protein UM00833.1 [Ustilago maydis 521]
(424 aa)

Score: 267 bits (683), Expect: 4.5035e-70
Length: 301, Idn/Pos/Gap = 147/200/4 (48%/66%/1%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D+S L P   V +  DSY + + LP + D  V    V++ P   +  +GGLD+QI+E+ 
Sbjct: 120 IDISALTPTLRVALRSDSYTLHKVLPNKIDPLVSLMMVEKVPDSTYEMVGGLDRQIKEIK 179

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A  T   F++++G+ LVQ 
Sbjct: 180 EVIELPVKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQK 239

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELD-AIGTKRFDSDRSGDRETQRTMLELLNQLD 371
           +IG+G+R+VR+ F +A++ APSIIF+DE+D    ++       GD E QRTMLELLNQLD
Sbjct: 240 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLD 299

Query: 372 GFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPD 431
           GF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P   AR  ILRIHSRKM++   
Sbjct: 300 GFEGTKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPGPEARVSILRIHSRKMSLQRG 359

Query: 432 VSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV---QAKKKMSL 488
           ++   LA      + A ++ +C EAGM ALR  R+ V HEDF   IA V   QA  + S+
Sbjct: 360 INLRALAEKMGQCSGAEVRGICTEAGMYALRERRQHVSHEDFELAIAKVLRAQASSETSV 419

Query: 489 N 489
           N
Sbjct: 420 N 420

emb|CAD25732.1| 26S PROTEASOME REGULATORY SUBUNIT 6 [Encephalitozoon cuniculi GB-M1]
emb|CAD26499.1| 26S PROTEASOME REGULATORY SUBUNIT 6 [Encephalitozoon cuniculi GB-M1]
ref|NP_586128.1| 26S PROTEASOME REGULATORY SUBUNIT 6 [Encephalitozoon cuniculi GB-M1]
ref|NP_597323.1| 26S PROTEASOME REGULATORY SUBUNIT 6 [Encephalitozoon cuniculi GB-M1]
sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog
(387 aa)

Score: 267 bits (683), Expect: 5.14669e-70
Length: 320, Idn/Pos/Gap = 138/202/0 (43%/63%/0%)

Query: 172 SPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVD 231
           S   +V ++      + I   VD   L+P   V +++ S  I+  LP E D+ +      
Sbjct:  67 SSTAIVGSTAGSNFVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGES 126

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E+P+  + D+GGLD Q +E+ E V LP+    L+ ++GI PP+GVL+YGPPGTGKT+L +
Sbjct: 127 EKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVK 186

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A  TKATF+++ G+  VQ ++G+G R+VRD F LA++KAPSI+FIDE+D+I TKRFD+
Sbjct: 187 AVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDA 246

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
             S DRE QR ++ELLNQ+DGFD   +V+V+ ATNR D +D AL+R GRLDRKIEFP PD
Sbjct: 247 STSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPD 306

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHE 471
              +  +    + KM+++  V  E L    +  + A + ++C EAGM A+RA R +V   
Sbjct: 307 RRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQR 366

Query: 472 DFIDGIAAVQAKKKMSLNYY 491
           DF +  + V  +      +Y
Sbjct: 367 DFEEAYSKVVERSGTQPAFY 386

gb|AAK39745.1| 26S proteasome SU [Guillardia theta]
ref|NP_113174.1| 26S proteasome SU [Guillardia theta]
pir||F90131 26S proteasome SU [imported] - Guillardia theta nucleomorph
(400 aa)

Score: 266 bits (680), Expect: 1.15617e-69
Length: 317, Idn/Pos/Gap = 130/211/1 (41%/66%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           +VVK +      L +   +++ +++ GD V +  +SY I + LP + D  V   +++  P
Sbjct:  78 IVVKINPDGKFILKLGKKINLKKIKIGDRVAIRNESYEIHKVLPSKTDPLVSLMKIENVP 137

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
             ++  IGGL+ QI ++ E + LP+ +  +FE +G+  PKG+L+YGPPGTGKTL+ARA A
Sbjct: 138 FCNYNMIGGLESQIGKIKEIIELPLKYPEIFEILGVFQPKGILLYGPPGTGKTLIARAVA 197

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS-DR 353
             +  +F++++G+ LVQ +IG+G R+VR+ F++AKK +PSIIF+DE+D+IG+ R      
Sbjct: 198 FHSNCSFIRVSGSELVQKYIGEGGRMVREIFSIAKKNSPSIIFMDEVDSIGSHRKKHVSS 257

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           +GD E QRTMLELLNQLDGF+++ ++++L ATNR D+LD AL+R GR+DRKI+ P+P+  
Sbjct: 258 TGDSEVQRTMLELLNQLDGFEEHKNIKILMATNRIDVLDPALIRPGRIDRKIKIPNPNVE 317

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            R  ILRIH +K+     +   ++A+  +    A +KA+C E+GM+A+R  + +V  ED 
Sbjct: 318 GRISILRIHLKKIKCENGIDIWKIAKIIEGATGADIKAICTESGMSAIRKAKNIVSVEDI 377

Query: 474 IDGIAAVQAKKKMSLNY 490
           +  I  +    K+ +N+
Sbjct: 378 LYAIDKIFGLSKLKVNH 394

ref|XP_587112.1| PREDICTED: similar to proteasome 26S ATPase subunit 4 isoform 2 [Bos taurus]
(445 aa)

Score: 266 bits (679), Expect: 1.40077e-69
Length: 330, Idn/Pos/Gap = 145/207/15 (43%/62%/4%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ I   +D   L+P   V ++K S  +++ LP E D+ +     D++P 
Sbjct: 116 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 175

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +ADIGG+D Q +EV EAV LP+TH  L++++GI PP+GVLMYGPPG GKT+LA+A A 
Sbjct: 176 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 235

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIFIDE+DAI TKRFD+    
Sbjct: 236 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 295

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLA---ATNRPDILDAALMRSGRLDRKIEFPHPDE 412
           DRE QR +LELLNQ+DGFDQN +V+V     A    D LD AL+R GRLDRKIEFP PD 
Sbjct: 296 DREVQRILLELLNQMDGFDQNVNVKVWDSGWAGEVADTLDPALLRPGRLDRKIEFPLPDR 355

Query: 413 AARARILRIHSRKMNVHPDVSYE-----------ELARSTDDFNAAMLKAVCVEAGMAAL 461
             +  I    + KMN+  +V  E           ++AR  D  + A + ++C E+GM A+
Sbjct: 356 RQKRLIFSTITSKMNLSEEVDLEDWDGFLNTSATDVARP-DKISGADINSICQESGMLAV 414

Query: 462 RADRKVVIHEDFIDGIAAVQAKKKMSLNYY 491
           R +R +V+ +DF      V  K +    +Y
Sbjct: 415 RENRYIVLAKDFEKAYKTVIKKDEQEHEFY 444

gb|AAO60052.1| proteasome-like protein [Rhipicephalus appendiculatus]
(397 aa)

Score: 266 bits (679), Expect: 1.44831e-69
Length: 297, Idn/Pos/Gap = 140/199/6 (47%/67%/2%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D ++L+ G  V ++  +  I+  LP E D  V     ++     ++ IGGL +QI E+ 
Sbjct:  95 LDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNISYSMIGGLAEQIRELR 154

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+ +  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q +A FLK+  +++V  
Sbjct: 155 EVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQIEANFLKVVSSAIVDK 214

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDE---LDAIGTKRFDSDRSGDRETQRTMLELLNQ 369
           +IG+ ARL+R+ F  A+   P +IF+DE   L A+G+++    R GDRE QRT++ELLNQ
Sbjct: 215 YIGESARLIREMFNYARDHQPCVIFMDETMPLVAVGSRK---GRGGDREIQRTLMELLNQ 271

Query: 370 LDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVH 429
           +DGFD    V+++ ATNRPD LD AL+R GRLDRKIE P P+E AR  I++IH+  +  H
Sbjct: 272 MDGFDSLGQVKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLDIVKIHATPITKH 331

Query: 430 PDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            +V +E + + +D FN A L+ VC EAGM A+RADR+ VI EDF+  +  V   KK+
Sbjct: 332 GEVDWEAVVKLSDGFNGADLRNVCTEAGMFAIRADREFVIEEDFMKAVRKVADNKKL 388

emb|CAF05887.1| probable 26S proteasome regulatory particle chain RPT3 [Neurospora crassa]
ref|XP_331036.1| 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG [Neurospora crassa]
gb|EAA30668.1| 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG [Neurospora crassa]
(421 aa)

Score: 266 bits (679), Expect: 1.57433e-69
Length: 305, Idn/Pos/Gap = 139/203/1 (45%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V++ST     + I   +D   L+P   V +++ S  +++ LP E D+ +     DE+P 
Sbjct: 102 IVQSSTGSNYVVRILSTLDRELLKPSSSVALHRHSNAVVDILPPEADSSIAMLGADEKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+TH  L++++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 162 VTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F +A++ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 STTANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP+  D   
Sbjct: 282 DREVQRILLELLNQMDGFDQTANVKVIMATNRADTLDPALLRPGRLDRKIEFPNLRDRRE 341

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+V  + L    D  + A++ A+  EAG+ A+R +R  +I  D  
Sbjct: 342 RRLIFTTIAGKMSLAPEVDLDSLIVRNDPLSGAVIAAIMQEAGLRAVRKNRYNIIQADLE 401

Query: 475 DGIAA 479
           D  ++
Sbjct: 402 DAYSS 406

gb|EAA49250.1| hypothetical protein MG00908.4 [Magnaporthe grisea 70-15]
ref|XP_368336.1| hypothetical protein MG00908.4 [Magnaporthe grisea 70-15]
(421 aa)

Score: 265 bits (678), Expect: 1.62776e-69
Length: 305, Idn/Pos/Gap = 139/202/1 (45%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V++ST     + I   +D   L+P   V +++ S  +++ LP E D+ +     DE+P 
Sbjct: 102 IVQSSTGSNYVVRILSTLDRELLKPSSSVALHRHSNALVDILPPEADSSIAMLGADEKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+TH  L++++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 162 VTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F +A++ AP+IIFIDE+DAI TKRFD+    
Sbjct: 222 STTANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 282 DREVQRILLELLNQMDGFDQTANVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 341

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+V  + L    D  + A++ A+  EAG+ A+R +R  +I  D  
Sbjct: 342 RRLIFGTIASKMSLAPEVDLDSLIVRNDPLSGAVIAAIMQEAGLRAVRKNRYNIIQSDLE 401

Query: 475 DGIAA 479
           D  ++
Sbjct: 402 DAYSS 406

gb|AAF91248.1| proteasome regulatory ATPase subunit 6 [Trypanosoma brucei]
(408 aa)

Score: 265 bits (678), Expect: 1.89155e-69
Length: 314, Idn/Pos/Gap = 147/207/3 (46%/65%/0%)

Query: 175 VVVKTSTRQ-TVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDER 233
           V+V  S+ Q  + + +   V++ +L     V +   ++ I   LP + D  V   +V+  
Sbjct:  84 VLVNVSSSQGKLVVDVEKTVNIDDLSRNVRVALRSGTFAIHYILPTKVDPLVSLMKVENA 143

Query: 234 PTED-FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARA 292
            +E  + +IGGL +Q++E+ E + L + H  LFE +GI  PKGVL+YGPPGTGKTLLARA
Sbjct: 144 GSESTYDEIGGLSRQVKEIKEVIELSVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 203

Query: 293 CAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD-S 351
            A  T  TF++++G  LVQ +IG+GARLVR+ F +A++ +PSIIF+DE+D+IG+ R + +
Sbjct: 204 VAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAREHSPSIIFMDEIDSIGSTRLENT 263

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
            R GD E QRTMLELLNQLDGF+    ++V+ ATNR DILD AL+R GR+DRKIEF  PD
Sbjct: 264 GRGGDSEVQRTMLELLNQLDGFESTQSIKVIMATNRVDILDEALLRPGRIDRKIEFSAPD 323

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHE 471
           E AR  IL+I+SRKMN+   ++   +A  T+  + A  KAVC EAGM ALR  R  +  E
Sbjct: 324 EPARFEILKINSRKMNLTRGINLRTVAEKTNQCSGAAYKAVCTEAGMFALRERRVHITQE 383

Query: 472 DFIDGIAAVQAKKK 485
           DF   +A +  K +
Sbjct: 384 DFELAVAKIMHKDQ 397

emb|CAA22628.1| let1 [Schizosaccharomyces pombe]
ref|NP_595870.1| 26s protease regulatory subunit 8 homolog [Schizosaccharomyces pombe]
gb|AAA61615.1| Let1
sp|P41836|PRS8_SCHPO 26S protease regulatory subunit 8 homolog (Protein let1)
pir||S45176 26S proteinase regulatory subunit 8 homolog - fission yeast  (Schizosaccharomyces pombe)
(403 aa)

Score: 265 bits (676), Expect: 3.04344e-69
Length: 310, Idn/Pos/Gap = 148/202/1 (47%/65%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + I   +D+ E++P   V +  DSY +++ LP + D  V    V++ P
Sbjct:  81 VLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIP 140

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGL+KQI+E+ E + LP+ H  LFE +GI  PKG+L+YGPPGTGKTLLARA A
Sbjct: 141 DSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDEL-DAIGTKRFDSDR 353
             T   F++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+     ++   S  
Sbjct: 201 HHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGG 260

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           SGD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+DRKIEFP P   
Sbjct: 261 SGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAE 320

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           ARA ILRIHSR MN+   +  + +A   +  + A LK VC EAGM ALR  R  V  EDF
Sbjct: 321 ARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDF 380

Query: 474 IDGIAAVQAK 483
              +A V  K
Sbjct: 381 ELAVAKVLNK 390

gb|EAA63488.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
ref|XP_407054.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
(443 aa)

Score: 265 bits (676), Expect: 3.30827e-69
Length: 284, Idn/Pos/Gap = 136/189/0 (47%/66%/0%)

Query: 197 ELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVV 256
           +L   D + V+++ Y I+  LP + D  V    V+++P   + D+GG  +QIE++ E V 
Sbjct: 143 DLSHTDRLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVE 202

Query: 257 LPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGD 316
           +P+     F  +GI PPKG L+YGPPGTGKTL ARA A +T ATF+++ G+ LVQ ++G+
Sbjct: 203 MPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGE 262

Query: 317 GARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQN 376
           GAR+VR+ F +A+ K   IIF DE+DA+G  RFD    GD E QRTMLEL+ QLDGFD  
Sbjct: 263 GARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDAR 322

Query: 377 DDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEE 436
            +++V+ ATNRP  LD ALMR GR+DRKIEF  PD   RA ILRIH++ M+V  D+ +E 
Sbjct: 323 GNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWEL 382

Query: 437 LARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
           ++R   +   A L++V  EAGM A+RA RKV   +DF+  +  V
Sbjct: 383 ISRLCPNATGAELRSVATEAGMFAIRARRKVATEKDFLAAVDKV 426

gb|EAA67662.1| hypothetical protein FG01198.1 [Gibberella zeae PH-1]
ref|XP_381374.1| hypothetical protein FG01198.1 [Gibberella zeae PH-1]
(400 aa)

Score: 264 bits (675), Expect: 4.04174e-69
Length: 311, Idn/Pos/Gap = 141/199/0 (45%/63%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     +     VD  +L+ G  V ++  +  I+  LP E D  V    +++   
Sbjct:  72 IVKASSGPRYVVGCRSKVDKVKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSLEDPGQ 131

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             FA IGGL+ QI E+ E + LP+ +  LF RVGIKPPKGVL+YGPPGTGKTLLARA A+
Sbjct: 132 VSFAGIGGLNDQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAS 191

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
             +  FLK+  +++V  +IG+ ARL+R+ F  AK+  P IIF+DE+DAIG +RF    S 
Sbjct: 192 SLETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSA 251

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELLNQLDGFD     +++ ATNRPD LD AL+R+GRLDRKIE P P+E  R
Sbjct: 252 DREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGR 311

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             IL+IHS+ + +  D+ +E + + +D  N A L+ V  EAG+ A++  R+ +  +DF  
Sbjct: 312 LEILKIHSQSVVIDGDLDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRESINQDDFNK 371

Query: 476 GIAAVQAKKKM 486
            +  V   KK+
Sbjct: 372 AVRKVAESKKL 382

gb|EAL49346.1| 26s proteasome subunit P45 family protein, putative [Entamoeba histolytica HM-1:IMSS]
(379 aa)

Score: 264 bits (675), Expect: 4.5048e-69
Length: 249, Idn/Pos/Gap = 130/173/0 (52%/69%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           + DIGGL  Q+ E+ E + LPMT+  LFERVG+K PKGVL+YGPPGTGKTLLARA A+  
Sbjct: 122 YEDIGGLRNQMREIREVIELPMTNPELFERVGVKAPKGVLLYGPPGTGKTLLARALASNL 181

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           +  FLK+  + +V  ++G+ ARL+R+ FA A++  P +IF+DE+DAI  KR       DR
Sbjct: 182 ECHFLKVVASGIVDKYLGESARLIREMFAYAREHQPCVIFMDEIDAIAGKRIAEGIHSDR 241

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E QRT++ELL Q+DGF++   V+++ ATNRPD+LD ALMR GRLDRKIE   P++  R  
Sbjct: 242 EIQRTLMELLAQMDGFNEISKVKIIMATNRPDVLDPALMRPGRLDRKIEISLPNDQGRIE 301

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGI 477
           IL+IHS+KMN+  +V YE + + T+ FN A L+ VC EAGM A+R DR   I EDF   I
Sbjct: 302 ILKIHSKKMNIQEEVDYEAMGKLTEGFNGADLRNVCTEAGMFAIRDDRDYCIEEDFFKAI 361

Query: 478 AAVQAKKKM 486
                 KK+
Sbjct: 362 RKQAEAKKL 370

gb|EAA42208.1| GLP_49_27747_26542 [Giardia lamblia ATCC 50803]
(401 aa)

Score: 264 bits (674), Expect: 5.41248e-69
Length: 312, Idn/Pos/Gap = 134/204/0 (42%/65%/0%)

Query: 177 VKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTE 236
           +K+S      + +   V +S+L+PG  V +      I+  LP+  D  +   ++D+ P +
Sbjct:  81 IKSSVDDKQIVNVSSKVSMSDLKPGLRVALRSSDSEIVMILPKHVDPAISLMKLDKVPDQ 140

Query: 237 DFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQ 296
            + DIGGL KQ+ E+ E + LP+ H  +F+R+GI  PKGVL+YG PG GK+ +ARA A  
Sbjct: 141 SYDDIGGLSKQVLELREILELPIKHPEVFKRLGIPMPKGVLLYGAPGCGKSAVARAVAHH 200

Query: 297 TKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGD 356
              TF++++G+ L+  +IG+G+R+VR  F +A K AP+I+FIDE D+IGTKR +    G+
Sbjct: 201 CGCTFIRVSGSELLSKYIGEGSRMVRQVFQMALKNAPAIVFIDECDSIGTKRSEDSHGGE 260

Query: 357 RETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARA 416
            E  RTM ELL+Q+DGF++N+ V+++ ATNR D LD AL+R GR+DRK+EFP PD A R 
Sbjct: 261 SEVNRTMTELLSQVDGFEENNSVKLIMATNRIDTLDDALLRPGRIDRKVEFPLPDVAGRI 320

Query: 417 RILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDG 476
            ILRIHSRKMN+   + ++++++S +  + +  +AVC+EAGM ALR  R  V  +DF   
Sbjct: 321 EILRIHSRKMNLVRQIDFKKISQSMEGASGSDCRAVCMEAGMFALRERRNYVTEDDFTLA 380

Query: 477 IAAVQAKKKMSL 488
              V + K + +
Sbjct: 381 ATKVMSWKDVGV 392

emb|CAD25551.1| 26S PROTEASOME REGULATORY SUBUNIT 10 [Encephalitozoon cuniculi GB-M1]
ref|NP_585947.1| 26S PROTEASOME REGULATORY SUBUNIT 10 [Encephalitozoon cuniculi GB-M1]
(390 aa)

Score: 263 bits (671), Expect: 1.19576e-68
Length: 312, Idn/Pos/Gap = 146/202/2 (46%/64%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK+S      +     +D +++  G  V ++  +  I+  LP E D  +     +E P 
Sbjct:  71 IVKSSQGPRYVVGCMKAIDRAKIATGTRVALDITTLTIMVVLPREVDPMIHLMG-EESPR 129

Query: 236 E-DFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           E  F  +GGL  QI E+ E + LP+ +  +F+R+G+  PKGVL+YGPPGTGKTLLAR  A
Sbjct: 130 EISFESVGGLKDQIRELREVIELPLKNPDIFKRIGVHAPKGVLLYGPPGTGKTLLARIVA 189

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
           A     FLK+  ++L++ +IG+ +R++R+ FA A++KAP IIF+DE+DAIG KR     S
Sbjct: 190 ATMDVNFLKVVSSALIEKYIGESSRMIREMFAYARRKAPCIIFMDEIDAIGGKRSRESSS 249

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
            DRE QRT++ELLNQLDGF + D V+V+ ATNRPDILD AL+R GRLDRKIE P P+E  
Sbjct: 250 SDREVQRTLMELLNQLDGFKELDSVKVIMATNRPDILDPALLRPGRLDRKIEIPLPNEQG 309

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  IL+IHSR MN   ++ Y+ L + T  FN A L+ VC EAGM AL+ +R  V HEDF+
Sbjct: 310 RKEILKIHSRLMNSIEEIDYDSLVKLTSGFNGADLRNVCTEAGMIALKDERDYVKHEDFV 369

Query: 475 DGIAAVQAKKKM 486
                +   KK+
Sbjct: 370 KSARKIADAKKL 381

gb|EAA73795.1| PRS6_ASPNG 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG [Gibberella zeae PH-1]
ref|XP_390945.1| PRS6_ASPNG 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG [Gibberella zeae PH-1]
(421 aa)

Score: 263 bits (671), Expect: 1.2467e-68
Length: 305, Idn/Pos/Gap = 137/202/1 (44%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V++ST     + I   +D  +L+    V +++ S  +++ LP E D+ +     DE+P 
Sbjct: 102 IVQSSTGSNYVVRILSTLDREKLKASSSVALHRHSNALVDILPPEADSSIAMLGTDEKPD 161

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+TH  L++++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 162 VTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 221

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F +A++ +P+IIFIDE+DAI TKRFD+    
Sbjct: 222 STTANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 281

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 282 DREVQRILLELLNQMDGFDQTANVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 341

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+V  + L    D  + A++ A+  EAG+ A+R +R  +I  D  
Sbjct: 342 RRLIFSTIASKMSLAPEVDLDSLIVRNDPLSGAVIAAIMQEAGLRAVRKNRYNIIQTDLE 401

Query: 475 DGIAA 479
           D  ++
Sbjct: 402 DAYSS 406

emb|CAG58590.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_445679.1| unnamed protein product [Candida glabrata]
(400 aa)

Score: 261 bits (668), Expect: 2.31159e-68
Length: 313, Idn/Pos/Gap = 144/201/2 (46%/64%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   ++V +L+    V +  DSY++ + L  + D  V    V++ P
Sbjct:  77 VLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLVNKADPLVSLMMVEKVP 136

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  +GGL KQI+E+ E + LP+ H  LFE +GI  PKGV++YGPPGTGKTLLARA A
Sbjct: 137 DSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 196

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAI--GTKRFDSD 352
             T   F++++G  LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+I          
Sbjct: 197 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGGGS 256

Query: 353 RSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDE 412
             GD E QRTMLELLNQLDGF+ + +++++ ATNR DILD AL+R GR+DRKIEFP P  
Sbjct: 257 GGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPTV 316

Query: 413 AARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHED 472
           AARA ILRIHSRKMN+   ++  ++A   +  + A +K VC EAGM ALR  R  V  ED
Sbjct: 317 AARAEILRIHSRKMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQED 376

Query: 473 FIDGIAAVQAKKK 485
           F   +  V  K +
Sbjct: 377 FELAVGKVMNKNQ 389

emb|CAG80902.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_502714.1| hypothetical protein [Yarrowia lipolytica]
(404 aa)

Score: 261 bits (667), Expect: 3.91021e-68
Length: 305, Idn/Pos/Gap = 137/202/1 (44%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T     + I   +D   L+P   V +++ S  +++ LP E D+ +     DE+P 
Sbjct:  85 IVASTTGSNYVVRILSTLDRELLKPSSSVALHRHSNALVDILPPEADSSIAMLRPDEKPD 144

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+T   L++++GI PP+GVL++GPPGTGKT+L +A A 
Sbjct: 145 VSYADVGGLDIQKQEIREAVELPLTQFELYKQIGIDPPRGVLLFGPPGTGKTMLVKAVAN 204

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LA++ +PSIIFIDE+DAI TKRFD+    
Sbjct: 205 NTTASFIRVVGSEFVQKYLGEGPRMVRDIFRLARENSPSIIFIDEIDAIATKRFDAQTGA 264

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP+  D   
Sbjct: 265 DREVQRILLELLNQMDGFDQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPNLRDRRE 324

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+   + L    D  + A++ A+  EAG+ A+R +R V+I  D  
Sbjct: 325 RRLIFSTIASKMSLAPECDLDALIIRNDPLSGAIIAAIMQEAGLRAVRKNRYVIIQSDLE 384

Query: 475 DGIAA 479
           +  +A
Sbjct: 385 EAYSA 389

gb|EAA39033.1| GLP_90_16591_17934 [Giardia lamblia ATCC 50803]
(447 aa)

Score: 261 bits (666), Expect: 3.94297e-68
Length: 301, Idn/Pos/Gap = 137/203/2 (45%/67%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSY--LILEKLPEEYDARVKAFEVDE 232
           +VVK +   +++      VD   L+P  LV + +D++  +++  L  + D  V   +V E
Sbjct: 127 LVVKKTEYSSIYTKALSFVDRELLQPNALVHLMEDAHRDIVVGVLSHDEDPNVTMMKVIE 186

Query: 233 RPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARA 292
           RP + +ADIGG D+ I+E+ E + LP+T+   F  +GI+PP+  +++GP GTGK+LLARA
Sbjct: 187 RPKDTYADIGGQDEAIKELQETIQLPLTNPEYFVDLGIEPPRSCILHGPSGTGKSLLARA 246

Query: 293 CAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSD 352
           CA +T A ++K+AG+ L+Q + G+G RLVR+ F  AK   P+IIFIDE+DA+G KR+D+D
Sbjct: 247 CANETSACYMKMAGSELIQKYSGEGPRLVRELFKAAKANQPTIIFIDEVDAVGRKRYDAD 306

Query: 353 RSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDE 412
             G RE QRTMLELLNQLDGFD+ + V+V+ ATN  + LD+AL+R+GR+DRKI    PD 
Sbjct: 307 SGGAREIQRTMLELLNQLDGFDRTEGVKVIMATNLIESLDSALIRAGRIDRKIYVGLPDL 366

Query: 413 AARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHED 472
            AR +I +IH+R+M +  D+  +E+    DD + A +KA+ +EAG+ ALR  R  V   D
Sbjct: 367 TARRQIFKIHTRRMMLDKDIVEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSD 426

Query: 473 F 473
           F
Sbjct: 427 F 427

gb|AAF91246.1| proteasome regulatory ATPase subunit 4 [Trypanosoma brucei]
(399 aa)

Score: 260 bits (665), Expect: 6.39727e-68
Length: 291, Idn/Pos/Gap = 144/194/2 (49%/66%/0%)

Query: 197 ELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTE-DFADIGGLDKQIEEVIEAV 255
           +L+ G  V +   +  I+  LP E D +V   +V E      F +IGGL +Q+ ++ E V
Sbjct: 100 KLKIGTRVALEITTLTIVRVLPREVDPQVYNMQVMENEKNISFQEIGGLQEQMRQMREVV 159

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LP+T+  LF RVGI PPKGVL+YGPPGTGKTLLA+A A+   A FLK+  +S+V  +IG
Sbjct: 160 ELPLTNPELFVRVGISPPKGVLLYGPPGTGKTLLAKAIASNVDAAFLKIVASSIVDKYIG 219

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQ 375
           + AR++R+ FA A+   P IIFIDE+DAIG KR +   S DRE QRT++ELL+Q+DGF++
Sbjct: 220 ESARVLREMFAFARDHEPCIIFIDEVDAIGGKRIEGS-SSDREVQRTLMELLHQMDGFEK 278

Query: 376 NDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE 435
              V+V+ ATNRPD LD ALMR GRLDRKIE   P+EA R  +L+IH+ K+    D+ Y+
Sbjct: 279 LGKVKVIMATNRPDTLDPALMRPGRLDRKIEIGLPNEAGRLDVLKIHASKITKQGDIDYD 338

Query: 436 ELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            + + ++ FN A L+ VC EAGM ALRA R  VI+EDF      V   KK+
Sbjct: 339 SIVKLSEGFNGADLRNVCTEAGMFALRAGRDYVINEDFNKATRKVADSKKL 389

ref|ZP_00296985.1| COG1222: ATP-dependent 26S proteasome regulatory subunit [Methanosarcina barkeri str. fusaro]
(413 aa)

Score: 260 bits (664), Expect: 7.75066e-68
Length: 301, Idn/Pos/Gap = 140/199/2 (46%/66%/0%)

Query: 174 AVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDER 233
           A++ +    Q V   IP    + ++ PG  V VN  +Y I+  +    D R +  E+   
Sbjct:  95 ALIRQHGNNQEVLTQIPEEC-IGKIEPGMRVAVN-GAYSIISVVSRAADVRAQVMELINS 152

Query: 234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC 293
           P  D++ IGGLD  ++EV E+V LP+T   LFE +GI+PP GVL++G PGTGKTL+A+A 
Sbjct: 153 PGVDYSMIGGLDDVLQEVRESVELPLTEPQLFEEIGIEPPSGVLLHGAPGTGKTLIAKAI 212

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A+  KATF++++G+ LVQ F+G+G+RLV+D F LA+ K+PSI+FIDE+DA+G+ R     
Sbjct: 213 ASHAKATFIRMSGSDLVQKFVGEGSRLVKDIFQLARDKSPSILFIDEIDAVGSMRTYDGT 272

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           SG  E  RTML+LL ++DGFD   +V+++AATNR D+LD AL+R GR DR IE P PDE 
Sbjct: 273 SGSAEVNRTMLQLLAEMDGFDPKGNVKIVAATNRIDLLDPALLRPGRFDRSIEVPLPDEK 332

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            RA IL+IH+RKMN+  DV +E+LAR     + A +  +  EAG+  LR   K +   DF
Sbjct: 333 GRAEILKIHTRKMNLADDVDFEKLARVMTGMSGAEISVIVKEAGIFVLRRRGKQITMADF 392

Query: 474 I 474
           +
Sbjct: 393 L 393

gb|AAV47895.1| proteasome-activating nucleotidase 1 [Haloarcula marismortui ATCC 43049]
ref|YP_137601.1| proteasome-activating nucleotidase 1 [Haloarcula marismortui ATCC 43049]
(406 aa)

Score: 259 bits (662), Expect: 1.48588e-67
Length: 290, Idn/Pos/Gap = 146/199/1 (50%/68%/0%)

Query: 198 LRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVL 257
           L  GD V +N DS+ + + L  E DAR +A +VD  P   ++DIGGL++QI EV EAV  
Sbjct: 111 LEAGDRVAIN-DSFGVKQILDPETDARAQAMQVDGSPDVSYSDIGGLEEQIREVREAVEE 169

Query: 258 PMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDG 317
           P+ +   F  VGI+PP GVL++GPPGTGKT+LA+A A +T ATF+K+AG+ LV+ FIG+G
Sbjct: 170 PLVNAEQFREVGIEPPSGVLLHGPPGTGKTMLAKAVANETDATFIKMAGSELVRKFIGEG 229

Query: 318 ARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQND 377
           ARLVRD F LA ++ P+IIFIDE+DAI  KR +S  SGD E QRTM++LL+++DGFD+  
Sbjct: 230 ARLVRDLFELAAEREPAIIFIDEIDAIAAKRTESKTSGDAEVQRTMMQLLSEMDGFDERG 289

Query: 378 DVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEEL 437
           ++R++AATNR D+LD A++R GR DR IE P+PD   R RIL IH+++MN+  DV     
Sbjct: 290 EIRIIAATNRFDMLDRAILRPGRFDRLIEVPNPDVEGRERILEIHTQEMNLDDDVDLGAF 349

Query: 438 ARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKMS 487
           A  TD  + A L ++  EAGM A+R  R  V   D  D +  ++A    S
Sbjct: 350 ATETDGLSGAELASLATEAGMFAIRDGRTTVQQADLHDALEKIEADDDAS 399

gb|EAK81195.1| PRS6_MANSE 26S PROTEASE REGULATORY SUBUNIT 6B (ATPASE MS73) [Ustilago maydis 521]
ref|XP_398161.1| PRS6_MANSE 26S PROTEASE REGULATORY SUBUNIT 6B (ATPASE MS73) [Ustilago maydis 521]
(384 aa)

Score: 258 bits (660), Expect: 1.98981e-67
Length: 285, Idn/Pos/Gap = 131/189/0 (45%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T     + I   +D   L+    V +++ S  +++ LP E D+ +     DE+PT
Sbjct:  69 IVGSTTGSNYVVRILSTIDRELLKASSSVALHRHSNALVDVLPPEADSSIAMLGQDEKPT 128

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
           E + DIGG+D Q +E+ EAV LP+    L+ ++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 129 ETYQDIGGMDIQKQEIREAVELPLVQFDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 188

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LA++ AP+IIFIDE+DAI TKRFD+    
Sbjct: 189 ATTASFIRVVGSEFVQKYLGEGPRMVRDVFRLARENAPAIIFIDEIDAIATKRFDAQTGA 248

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR +LELLNQ+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP P    +
Sbjct: 249 DREVQRILLELLNQMDGFDQGSNVKVIMATNRADTLDPALLRPGRLDRKIEFPTPSRREK 308

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAA 460
             I +    KMN+ P+V  E+     D  ++A + ++C  AG+ A
Sbjct: 309 RLIFQTICGKMNLSPEVDLEDYVGRPDKLSSAEIASICQAAGLQA 353

emb|CAG61597.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_448634.1| unnamed protein product [Candida glabrata]
(431 aa)

Score: 258 bits (660), Expect: 2.39073e-67
Length: 305, Idn/Pos/Gap = 133/201/1 (43%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T     + I   +D  +L+P   V +++ S  +++ LP + D+ +     +E+P 
Sbjct: 112 IVSSTTGMNYVVRILSTLDREQLKPSTSVALHRHSNALVDILPPDSDSSISVMGENEKPD 171

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+    L+E++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 172 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 231

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            TKA F+++ G+  VQ ++G+G R+VRD F LA++ +PSI+FIDE+D+I TKRFD+    
Sbjct: 232 STKAAFIRVNGSEFVQKYLGEGPRMVRDVFRLARENSPSIVFIDEVDSIATKRFDAQTGS 291

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR ++ELL Q+DGFDQ+ +V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 292 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 351

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+   + L    D  + A++ A+  EAG+ A+R +R V++  D  
Sbjct: 352 RRLIFGTIASKMSLAPEADLDSLIIRNDAISGAVIAAIMQEAGLRAVRKNRYVILQSDLE 411

Query: 475 DGIAA 479
           +  AA
Sbjct: 412 EAYAA 416

emb|CAA51972.1| 26S proteasome subunit Rpt3 [Saccharomyces cerevisiae]
sp|P33298|PRS6B_YEAST 26S protease regulatory subunit 6B homolog (YNT1 protein) (TAT-binding homolog 2)
gb|AAA81916.1| Ynt1p
(428 aa)

Score: 256 bits (655), Expect: 7.88337e-67
Length: 304, Idn/Pos/Gap = 133/200/1 (43%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T  +  + I   +D   L+P   V +++ S  +++ LP + D+ +     +E+P 
Sbjct: 109 IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPD 168

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+    L+E++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            TKA F+++ G+  V  ++G+G R+VRD F LA++ APSIIFIDE+D+I TKRFD+    
Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR ++ELL Q+DGFDQ+ +V+V+ ATNR D LD AL+R GRLDRKIEFP+  D   
Sbjct: 289 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRE 348

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+   + L    D  + A++ A+  EAG+ A+R +R V++  D  
Sbjct: 349 RRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLE 408

Query: 475 DGIA 478
           +  A
Sbjct: 409 EAYA 412

ref|ZP_00148820.2| COG1222: ATP-dependent 26S proteasome regulatory subunit [Methanococcoides burtonii DSM 6242]
(415 aa)

Score: 256 bits (654), Expect: 1.0296e-66
Length: 266, Idn/Pos/Gap = 131/188/0 (49%/70%/0%)

Query: 222 DARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGP 281
           D R +  E+ + P  D+  IGGLD  ++EVIE+V LP+T   LFE +GI+PP GVLMYG 
Sbjct: 143 DVRAQMMELIDSPGIDYDMIGGLDDVLKEVIESVELPLTEPELFENIGIEPPSGVLMYGS 202

Query: 282 PGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDEL 341
           PGTGKTL+A+A A++  ATF++++G+ LVQ FIG+GARLV+D F LA++K+PSI+FIDE+
Sbjct: 203 PGTGKTLIAKAVASRAHATFIRMSGSDLVQKFIGEGARLVKDVFQLAREKSPSILFIDEI 262

Query: 342 DAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRL 401
           DA+G  R     +G  E  RTML+LL ++DGFD + +V+++AATNR D+LD AL+R GR 
Sbjct: 263 DAVGGMRTHDGTTGSAEVNRTMLQLLAEMDGFDPSGNVKIIAATNRIDLLDPALLRPGRF 322

Query: 402 DRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAAL 461
           DR IE P PDE AR  IL+IH+RKMN+  D+   ++A  TD  + A L  +  EAGM  L
Sbjct: 323 DRIIEIPIPDEKAREEILKIHTRKMNLEKDIDLAKIANMTDGLSGADLNVIVKEAGMFVL 382

Query: 462 RADRKVVIHEDFIDGIAAVQAKKKMS 487
           R    ++  +DF++    V ++++++
Sbjct: 383 RRRGDMIKMQDFLEAFEKVVSEEEVN 408

gb|AAS53765.1| AFR394Wp [Ashbya gossypii ATCC 10895]
ref|NP_985941.1| AFR394Wp [Eremothecium gossypii]
(472 aa)

Score: 256 bits (654), Expect: 1.0296e-66
Length: 299, Idn/Pos/Gap = 131/197/1 (43%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T  +  + I   +D   L+P   V +++ S  +++ LP + D+ +     +E+P 
Sbjct: 148 IVSSTTGMSYVVRILSTLDRELLKPSTSVALHRHSNALVDILPPDSDSSISIMGNNEKPD 207

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+    L++++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 208 VTYADVGGLDMQKQEIREAVELPLVQADLYQQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 267

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  V  ++G+G R+VRD F LA++ APSIIFIDE+D+I TKRFD+    
Sbjct: 268 STNAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 327

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR ++ELL Q+DGFDQ+ +V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 328 DREVQRILIELLTQMDGFDQSTNVKVIMATNRHDTLDPALLRPGRLDRKIEFPSLRDRRE 387

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           R  I    + KM++ P+V  + L    D  + A++ A+  EAG+ A+R +R V++  D 
Sbjct: 388 RRLIFGTIAAKMSLAPEVDLDSLIIRNDPLSGALIAAIMQEAGLRAVRKNRYVILQSDL 446

gb|EAA63475.1| PRS6_ASPNG 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG [Aspergillus nidulans FGSC A4]
ref|XP_407041.1| PRS6_ASPNG 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG [Aspergillus nidulans FGSC A4]
(430 aa)

Score: 256 bits (653), Expect: 1.35597e-66
Length: 313, Idn/Pos/Gap = 137/204/9 (43%/65%/2%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V++ST     + I   +D  +L+P   V +++ S  +++ LP E D+ +     +E+P 
Sbjct: 103 IVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPD 162

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFE--------RVGIKPPKGVLMYGPPGTGKT 287
             +AD+GGLD Q +E+ EAV LP+TH  L++        R+GI PP+GVL+YGPPGTGKT
Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTHFDLYKQIVLIVFLRLGIDPPRGVLLYGPPGTGKT 222

Query: 288 LLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTK 347
           +L +A A  T A+F+++ G+  VQ ++G+G R+VRD F +A++ +P+IIFIDE+DAI TK
Sbjct: 223 MLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATK 282

Query: 348 RFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEF 407
           RFD+    DRE QR +LELLNQ+DGF+Q  +V+V+ ATNR D LD AL+R GRLDRKIEF
Sbjct: 283 RFDAQTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEF 342

Query: 408 PH-PDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRK 466
           P   D   R  I    + KM++ P+V  + L    +  + A++ A+  EAG+ A+R +R 
Sbjct: 343 PSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRY 402

Query: 467 VVIHEDFIDGIAA 479
            +I  D  D  +A
Sbjct: 403 NIIQSDLEDAYSA 415

emb|CAG79841.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_504246.1| hypothetical protein [Yarrowia lipolytica]
(410 aa)

Score: 256 bits (653), Expect: 1.61564e-66
Length: 349, Idn/Pos/Gap = 147/200/7 (42%/57%/2%)

Query: 145 GAADHEDDLDDAEEDEGAAQ-------ESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSE 197
           G  D E   D  E+D  A Q       E          +VK S      +     +   +
Sbjct:  53 GIRDLERKFDKTEDDIKALQSVGQLIGEVLKQLDEERFIVKASNGPRYIVGCRSSIKKEK 112

Query: 198 LRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVL 257
           L  G  V ++  +  I+  LP E D  V      E     F+ IGGL++QI E+ E + L
Sbjct: 113 LLQGVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPGELTFSGIGGLNEQIRELREVIEL 172

Query: 258 PMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDG 317
           P+ +  LF RVGIKPPKGVL+YGPPGTGKTLLA+A AA   A F+    +++V  +IG+ 
Sbjct: 173 PLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGES 232

Query: 318 ARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQND 377
           ARL+R+ F  AK+  P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DGFD   
Sbjct: 233 ARLIREMFGYAKEHEPCIIFMDEVDAIGGRRFSEGTSSDREIQRTLMELLNQMDGFDYLG 292

Query: 378 DVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEEL 437
             +V+ ATNRPD LD AL+R+GRLDRKIE P P+EA R  + +IH+  +    ++ YE L
Sbjct: 293 KTKVIMATNRPDTLDPALLRAGRLDRKIEIPLPNEAGRLEVFKIHAAGVQKQGEIDYEAL 352

Query: 438 ARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            + +D FN A ++ V  EAG  A+R DR  ++  D +     V   KK+
Sbjct: 353 VKMSDGFNGADIRNVVTEAGFFAIRDDRDYIVQNDLLKACRKVSENKKL 401

gb|AAB64836.1| Yta2p; CAI: 0.21 [Saccharomyces cerevisiae]
ref|NP_010682.1| One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; substrate of N-acetyltransferase B [Saccharomyces cerevisiae]
(428 aa)

Score: 255 bits (652), Expect: 1.84639e-66
Length: 304, Idn/Pos/Gap = 133/199/1 (43%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T  +  + I   +D   L+P   V +++ S  +++ LP + D+ +     +E+P 
Sbjct: 109 IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPD 168

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+    L+E++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            TKA F+++ G+  V  ++G+G R+VRD F LA++ APSIIFIDE+D+I TKRFD+    
Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR ++ELL Q+DGFDQ+ +V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 289 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 348

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+   + L    D  + A++ A+  EAG+ A+R +R V++  D  
Sbjct: 349 RRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLE 408

Query: 475 DGIA 478
           +  A
Sbjct: 409 EAYA 412

emb|CAG90179.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_461726.1| unnamed protein product [Debaryomyces hansenii]
(416 aa)

Score: 255 bits (651), Expect: 2.21842e-66
Length: 299, Idn/Pos/Gap = 131/195/1 (43%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T     + I   +D   L+P   V +++ S  +++ LP E D+ +     +++P 
Sbjct:  97 IVSSTTGSNYVVRILSTLDRELLKPSSSVALHRHSNALVDTLPPEADSSISIVGDEQKPD 156

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+T   L+ ++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 157 VTYADVGGLDMQKQEIREAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 216

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            + A+F+++ G+  VQ ++G+G R+VRD F LA++ +P+IIFIDE+DAI TKRFD+    
Sbjct: 217 SSTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 276

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR +LELLNQ+DGFDQN  V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 277 DREVQRILLELLNQMDGFDQNSTVKVIMATNRHDTLDPALLRPGRLDRKIEFPSLKDRRE 336

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           R  I    +  M + P+   + L    D  + A++ A+  EAG+ A+R +R +++  D 
Sbjct: 337 RRLIFSTIASNMALAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMILQSDL 395

ref|NP_618991.1| proteasome-activating nucleotidase [Methanosarcina acetivorans C2A]
gb|AAM07471.1| proteasome-activating nucleotidase [Methanosarcina acetivorans str. C2A]
(340 aa)

Score: 255 bits (651), Expect: 2.37155e-66
Length: 307, Idn/Pos/Gap = 140/199/2 (45%/64%/0%)

Query: 174 AVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDER 233
           A++ +    Q V   IP    + ++ PG  V VN  +Y I+  +    D R +  E+   
Sbjct:  22 ALIRQHGNNQEVLTQIPEEC-LGKIEPGMRVAVN-GAYSIISIVSRAADVRAQVMELINS  79

Query: 234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC 293
           P  D++ IGGLD  ++EV E+V LP+T   LFE +GI+PP GVL++G PGTGKTL+A+A 
Sbjct:  80 PGVDYSMIGGLDDVLQEVRESVELPLTEPELFEDLGIEPPSGVLLHGAPGTGKTLIAKAI 139

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A+Q KATF++++G+ LVQ F+G+G+RLV+D F LA+ K+PSI+FIDE+DA+G+ R     
Sbjct: 140 ASQAKATFIRMSGSDLVQKFVGEGSRLVKDIFQLARDKSPSILFIDEIDAVGSMRTYDGT 199

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           SG  E  RTML+LL ++DGFD   +V+V+AATNR D+LD AL+R GR DR IE P PDE 
Sbjct: 200 SGSAEVNRTMLQLLAEMDGFDPKGNVKVVAATNRIDLLDPALLRPGRFDRSIEVPLPDEK 259

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            R  IL+IH+RKM +  DV +E+LA+     + A +  +  EAG+  LR   K +   DF
Sbjct: 260 GRVEILKIHTRKMKLADDVDFEKLAKVLTGKSGAEISVIVKEAGIFVLRRRGKEITMADF 319

Query: 474 IDGIAAV 480
           +     V
Sbjct: 320 MKAYEKV 326

gb|AAB40510.1| 26S proteasome subunit
sp|P78578|PRS6B_ASPNG 26S protease regulatory subunit 6B homolog
(423 aa)

Score: 255 bits (651), Expect: 2.53526e-66
Length: 309, Idn/Pos/Gap = 135/205/1 (43%/66%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V++ST     + I   +D  +L+P   V +++ S  +++ LP E D+ +     +E+P 
Sbjct: 103 IVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPD 162

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+T   L++++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F +A++ +P+IIFIDE+DAI TKRFD+    
Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR +LELLNQ+DGF+Q+ +V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 283 DREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 342

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+V  + L    +  + A++ A+  EAG+ A+R +R  +I    +
Sbjct: 343 RRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDL 402

Query: 475 DGIAAVQAK 483
           +   A Q K
Sbjct: 403 EDAYAAQVK 411

gb|EAK96307.1| likely 26S proteasome regulatory particle ATPase Rpt3p [Candida albicans SC5314]
gb|EAK96240.1| likely 26S proteasome regulatory particle ATPase Rpt3p [Candida albicans SC5314]
(411 aa)

Score: 255 bits (651), Expect: 2.6213e-66
Length: 299, Idn/Pos/Gap = 132/195/1 (44%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T     + I   +D   L+    V +++ S  +++ LP E D+ +     D++P 
Sbjct:  92 IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPD 151

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+T   L+ ++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 152 VTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LA++ +P+IIFIDE+DAI TKRFD+    
Sbjct: 212 STTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGA 271

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR +LELLNQ+DGFDQ   V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 272 DREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRE 331

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           R  I    + KM++ P+   + L    D  + A++ A+  EAG+ A+R +R +++  D 
Sbjct: 332 RRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMILQSDL 390

emb|CAH01339.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_452488.1| unnamed protein product [Kluyveromyces lactis]
(428 aa)

Score: 254 bits (649), Expect: 4.66174e-66
Length: 305, Idn/Pos/Gap = 130/200/1 (42%/65%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T  +  + I   +D   L+P   V +++ S  +++ LP + D+ +     +E+P 
Sbjct: 109 IVSSTTGMSYVVRILSTLDRELLKPSTSVALHRHSNALVDILPPDSDSSISIMAANEKPD 168

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +E+ EAV LP+    L++++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYQQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T+A F+++ G+  V  ++G+G R+VRD F LA++ +PSIIFIDE+D+I TKRFD+    
Sbjct: 229 ATEAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENSPSIIFIDEVDSIATKRFDAQTGS 288

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPH-PDEAA 414
           DRE QR ++ELL Q+DGFDQ+ +V+V+ ATNR D LD AL+R GRLDRKIEFP   D   
Sbjct: 289 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRE 348

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  I    + KM++ P+   + L    D  + A++ A+  EAG+ A+R +R V++  D  
Sbjct: 349 RRLIFGTIAAKMSLAPEADLDSLIIRNDPLSGALIAAIMQEAGLRAVRKNRYVILQSDLE 408

Query: 475 DGIAA 479
           +  A+
Sbjct: 409 EAYAS 413

gb|EAL44646.1| 26S proteasome subunit P45 family protein, putative [Entamoeba histolytica HM-1:IMSS]
(394 aa)

Score: 254 bits (648), Expect: 5.15267e-66
Length: 312, Idn/Pos/Gap = 143/194/24 (45%/62%/7%)

Query: 169 NQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAF 228
           +++ P  V+         +     V+   ++ G  VGV++  Y I   LP + D  V   
Sbjct:  90 DEREPRYVISIKEYAKFVVGKSNRVEKDAVQDGTRVGVDRARYEIKMALPPKIDPSVSV- 148

Query: 229 EVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTL 288
                              ++EV+E   LPM H   FE +GI PPKGVL+YGPPGTGKTL
Sbjct: 149 -------------------MKEVVE---LPMLHPEAFENLGIDPPKGVLLYGPPGTGKTL 186

Query: 289 LARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKR 348
           LARA A +T++TF+++ G+ LVQ ++G+GA++VRD F +AK K   IIF DE+DAIG  R
Sbjct: 187 LARAVANRTESTFVRVIGSELVQKYVGEGAKMVRDLFDMAKSKKSCIIFFDEIDAIGGTR 246

Query: 349 FDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFP 408
           F  D +G+ E QRTMLEL+NQLDGFD+  +++VL ATNRPD LD AL+R GRLDRKIEF 
Sbjct: 247 FQDD-TGESEVQRTMLELINQLDGFDKRGNIKVLMATNRPDTLDPALVRPGRLDRKIEFG 305

Query: 409 HPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVV 468
            PD   R  I +IH++ M+V  D+ Y+ LAR   +   A +++VC EAGM A+RA RKVV
Sbjct: 306 LPDIEGRTEIFKIHTKPMSVAKDIRYDLLARLCPNATGAEIQSVCTEAGMFAIRARRKVV 365

Query: 469 IHEDFIDGIAAV 480
              DF+D +  V
Sbjct: 366 TERDFLDAVEKV 377

emb|CAA21189.1| SPCC576.10c [Schizosaccharomyces pombe]
ref|NP_588437.1| 19s proteasome regulatory subunit [Schizosaccharomyces pombe]
sp|O74894|PRS6B_SCHPO 26S protease regulatory subunit 6B homolog
pir||T41420 26S proteinase regulatory subunit 6b homolog - fission yeast (Schizosaccharomyces pombe)
(389 aa)

Score: 253 bits (647), Expect: 6.78598e-66
Length: 304, Idn/Pos/Gap = 134/195/1 (44%/64%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T     + I   +D   L+P   V + + S  +++ LP E D+ +     DERP 
Sbjct:  71 IVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPD 130

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             +AD+GGLD Q +EV EAV LP+T   L+ ++GI PP+GVL+YGPPGTGKT+L +A A 
Sbjct: 131 VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A F+++ G+  VQ ++G+G R+VRD F +A++ AP+IIFIDE+DAI TKRFD+    
Sbjct: 191 STAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 250

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFP-HPDEAA 414
           DRE QR ++ELL Q+DGFDQ  +V+V+ ATNR D LD AL+R GRLDRKIEFP + D   
Sbjct: 251 DREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQ 310

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R  + +  + KM + P+V  +      D  + A + A+  +AG+ A+R  R V++  D  
Sbjct: 311 RRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIE 370

Query: 475 DGIA 478
           +  A
Sbjct: 371 EAYA 374

ref|NP_632822.1| 26S proteasome regulatory subunit RPT2/S4 [Methanosarcina mazei Go1]
gb|AAM30494.1| 26S proteasome regulatory subunit RPT2/S4 [Methanosarcina mazei Goe1]
(413 aa)

Score: 253 bits (645), Expect: 1.37918e-65
Length: 311, Idn/Pos/Gap = 141/202/5 (45%/64%/1%)

Query: 174 AVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDER 233
           A++ +    Q V   IP    + ++ PG  V VN  +Y I+  +    D R +  E+   
Sbjct:  95 ALIRQHGNNQEVLTQIPEEC-LGKIEPGMRVAVN-GAYSIISIVSRAADVRAQVMELINS 152

Query: 234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC 293
           P  D++ IGGLD  ++EV E+V LP+T   LFE +GI+PP GVL++G PGTGKTL+A+A 
Sbjct: 153 PGIDYSMIGGLDDVLQEVRESVELPLTEPELFEDLGIEPPSGVLLHGAPGTGKTLIAKAI 212

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A+Q KATF++++G+ LVQ F+G+G+RLV+D F LA+ K+PSI+FIDE+DA+G+ R     
Sbjct: 213 ASQAKATFIRMSGSDLVQKFVGEGSRLVKDIFQLARDKSPSILFIDEIDAVGSMRTYDGT 272

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           SG  E  RTML+LL ++DGFD   +V+V+AATNR D+LD AL+R GR DR IE P PD+ 
Sbjct: 273 SGSAEVNRTMLQLLAEMDGFDPKGNVKVVAATNRIDLLDPALLRPGRFDRSIEVPLPDDK 332

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
            R  IL+IH+RKM +  DV +E+LA+     + A +  +  EAG+  LR   K +   DF
Sbjct: 333 GRIEILKIHTRKMKLADDVDFEKLAKVMSGRSGAEISVIVKEAGIFVLRRRGKEITMADF 392

Query: 474 I---DGIAAVQ 481
           +   D +  VQ
Sbjct: 393 MKAYDKVVNVQ 403

gb|EAK98468.1| likely 26S proteasome regulatory particle ATPase Rpt4p [Candida albicans SC5314]
gb|EAK98376.1| likely 26S proteasome regulatory particle ATPase Rpt4p [Candida albicans SC5314]
(428 aa)

Score: 252 bits (643), Expect: 1.94174e-65
Length: 311, Idn/Pos/Gap = 138/190/0 (44%/61%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VKTS+     +     +    L+ G  V ++  +  I+  LP E D  V      E   
Sbjct: 109 IVKTSSGPRYIVGCRNTIKKENLKNGVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPGE 168

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             F  IGGL +QI E+ E + LP+ +  LF RVGIKPPKGVL+YGPPGTGKTLLA+A AA
Sbjct: 169 ISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 228

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
              A F+    +++V  +IG+ ARL+R+ FA AK+  P IIF+DE+DAIG +RF    S 
Sbjct: 229 TIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 288

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELLNQ+DGFD     +++ ATNRPD LD AL+R+GRLDRKIE   P+EA R
Sbjct: 289 DREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGR 348

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +IH+ K+    +  +E   + +D FN A ++ V  EAG  A+R DR  ++  D + 
Sbjct: 349 LEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLMK 408

Query: 476 GIAAVQAKKKM 486
            +  V   KK+
Sbjct: 409 AVRKVADVKKL 419

emb|CAG61571.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_448608.1| unnamed protein product [Candida glabrata]
(436 aa)

Score: 251 bits (641), Expect: 3.36784e-65
Length: 311, Idn/Pos/Gap = 138/192/0 (44%/61%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     + +   VD S+L+ G  V ++  +  I+  LP E D  V      E+  
Sbjct: 117 IVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGE 176

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             F  IGGL  QI E+ E + LP+ +  +F+RVGIKPPKGVL+YGPPGTGKTLLA+A AA
Sbjct: 177 ISFEGIGGLTDQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 236

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
              A F+    + +V  +IG+ AR++R+ FA AK+  P IIF+DE+DAIG +RF    S 
Sbjct: 237 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 296

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELL Q+DGFD     +++ ATNRPD LD AL+R GRLDRKIE P P+EA R
Sbjct: 297 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEAGR 356

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +IH+ K+    +  ++   + +D FN A ++    EAG  A+R DR  +I ED + 
Sbjct: 357 LEIFKIHTSKVKKSGEFDFDAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHIIPEDLMK 416

Query: 476 GIAAVQAKKKM 486
            +  V   KK+
Sbjct: 417 AVRKVAEVKKL 427

gb|AAK39776.1| 26S proteasome SU [Guillardia theta]
ref|NP_113211.1| 26S proteasome SU [Guillardia theta]
pir||C90136 26S proteasome SU [imported] - Guillardia theta nucleomorph
(383 aa)

Score: 249 bits (636), Expect: 1.3343e-64
Length: 298, Idn/Pos/Gap = 120/186/0 (40%/62%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V +S+   +      +++ S+ +    V ++K S  IL  L EE  + +      ++  
Sbjct:  67 IVSSSSGNYIMSRFISVINKSKFKTNTTVILHKFSNSILNTLGEEIGSDLSILNAKQKSK 126

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
            + +DIGGL+ Q +E+ EA+ LP+  K+LF  +GI PPKGVL+YGPPGTGKTL+ +A A 
Sbjct: 127 VNLSDIGGLEFQKQELKEAIELPILKKNLFIEIGIDPPKGVLLYGPPGTGKTLIVKAIAY 186

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
           +    F++ AG+  VQ ++G+G ++VRD F LA     SIIFIDE+DAI TKRFD++   
Sbjct: 187 RNSCAFIRTAGSEFVQKYLGEGPKMVRDLFKLANSYDSSIIFIDEIDAIATKRFDANTGA 246

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QR ++ELL Q+DGFD N + +++  TNR + LD A++R GR+DRKI FP P+ A +
Sbjct: 247 DREVQRILIELLTQMDGFDVNSNTKIIMCTNRVESLDPAILRPGRIDRKIYFPFPNTAEK 306

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
             +  +   KMN+  D++ E      +    A++ A+C EAG+ A+R +R  +  +DF
Sbjct: 307 RYMFSVILSKMNISEDLNIEIFINRKEKLTGAIISAICQEAGIQAIRKNRYRITQQDF 364

dbj|BAD92273.1| proteasome 26S ATPase subunit 5 variant [Homo sapiens]
(345 aa)

Score: 248 bits (634), Expect: 2.02505e-64
Length: 248, Idn/Pos/Gap = 125/172/0 (50%/69%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  81 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 140

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 141 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 200

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 201 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 260

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E A
Sbjct: 261 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 320

Query: 415 RARILRIH 422
           R  +   H
Sbjct: 321 RLDLCLSH 328

emb|CAH01476.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_452625.1| unnamed protein product [Kluyveromyces lactis]
(434 aa)

Score: 248 bits (634), Expect: 2.04202e-64
Length: 311, Idn/Pos/Gap = 138/190/0 (44%/61%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     + +   VD S+L+ G  V ++  +  I+  LP E D  V      E+  
Sbjct: 115 IVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTTFEQGE 174

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             F  IGGL +QI E+ E + LP+ +  +FERVGIKPPKGVL+YGPPGTGKTLLA+A AA
Sbjct: 175 ISFDGIGGLTEQIRELREVIELPLKNPEIFERVGIKPPKGVLLYGPPGTGKTLLAKAVAA 234

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
              A F+    + +V  +IG+ AR++R+ FA AK+  P IIF+DE+DAIG +RF    S 
Sbjct: 235 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEIDAIGGRRFSEGTSA 294

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELL Q+DGFD     +V+ ATNRPD LD AL+R GRLDRKIE   P+EA R
Sbjct: 295 DREIQRTLMELLTQMDGFDNLGQTKVIMATNRPDTLDPALLRPGRLDRKIEISLPNEAGR 354

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +IH+  +    +  +E   + +D FN A ++    EAG  A+R DR  +  ED + 
Sbjct: 355 LEIFKIHTSNVKKAGEFDFEAAVKMSDGFNGADIRNCITEAGFFAIRDDRDYINQEDLMK 414

Query: 476 GIAAVQAKKKM 486
            +  V   KK+
Sbjct: 415 AVRKVAEVKKL 425

ref|XP_509951.1| PREDICTED: similar to Psmc6 protein [Pan troglodytes]
(388 aa)

Score: 248 bits (634), Expect: 2.21971e-64
Length: 294, Idn/Pos/Gap = 133/184/15 (45%/62%/5%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  V     ++     +++IGGL +QI E+ 
Sbjct: 101 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELR 160

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 161 EVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 220

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG               +    LLNQ+DG
Sbjct: 221 YIGESARLIREMFNYARDHQPCIIFMDEIDAIG---------------KNNTLLLNQMDG 265

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 266 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 325

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE + + +D FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 326 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 379

emb|CAA99481.1| CRL13 [Saccharomyces cerevisiae]
sp|P53549|PRS10_YEAST 26S protease subunit RPT4 (26S protease subunit SUG2) (Proteasomal cap subunit)
gb|AAB51594.1| proteasome cap subunit [Saccharomyces cerevisiae]
ref|NP_014902.1| One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for spindle pole body duplication; localized mainly to the nucleus throughout the cell cycle [Saccharomyces cerevisiae]
(437 aa)

Score: 248 bits (633), Expect: 2.87494e-64
Length: 311, Idn/Pos/Gap = 136/192/0 (43%/61%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     + +   VD S+L+ G  V ++  +  I+  LP E D  V      E+  
Sbjct: 118 IVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGE 177

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             F  IGGL +QI E+ E + LP+ +  +F+RVGIKPPKGVL+YGPPGTGKTLLA+A AA
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
              A F+    + +V  +IG+ AR++R+ FA AK+  P IIF+DE+DAIG +RF    S 
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELL Q+DGFD     +++ ATNRPD LD AL+R GRLDRK+E P P+EA R
Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +IH+ K+    +  +E   + +D FN A ++    EAG  A+R DR  +  +D + 
Sbjct: 358 LEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMK 417

Query: 476 GIAAVQAKKKM 486
            +  V   KK+
Sbjct: 418 AVRKVAEVKKL 428

dbj|BAB78493.1| 26S proteasome regulatory particle triple-A ATPase subunit1b [Oryza sativa (japonica cultivar-group)]
(235 aa)

Score: 246 bits (629), Expect: 9.24568e-64
Length: 216, Idn/Pos/Gap = 119/155/0 (55%/71%/0%)

Query: 265 FERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDA 324
           F ++GI PPKGVL YGPPGTGKTLLARA A +T A F+++ G+ LVQ ++G+GAR+VR+ 
Sbjct:   3 FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVREL  62

Query: 325 FALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAA 384
           F +A+ K   I+F DE+DAIG  RFD    GD E QRTMLE++NQLDGFD   +++VL A
Sbjct:  63 FQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMA 122

Query: 385 TNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDF 444
           TNRPD LD AL+R GRLDRK+EF  PD   R +I +IH+R MN   D+ +E LAR   + 
Sbjct: 123 TNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNS 182

Query: 445 NAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
             A +++VC EAGM A+RA RK V  +DF+D +  V
Sbjct: 183 TGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 218

gb|AAA85134.1| Sug2p
(437 aa)

Score: 246 bits (627), Expect: 1.4876e-63
Length: 311, Idn/Pos/Gap = 135/191/0 (43%/61%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     + +    D S+L+ G  V ++  +  I+  LP E D  V      E+  
Sbjct: 118 IVKPSSGPRYIVGVRNSADRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGE 177

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             F  IGGL +QI E+ E + LP+ +  +F+RVGIKPPKGVL+YGPPGTGKTLLA+A AA
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
              A F+    + +V  +IG+ AR++R+ FA AK+  P IIF+DE+DAIG +RF    S 
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELL Q+DGFD     +++ ATNRPD LD AL+R GRLDRK+E P P+EA R
Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +IH+ K+    +  +E   + +D FN A ++    EAG  A+R DR  +  +D + 
Sbjct: 358 LEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMK 417

Query: 476 GIAAVQAKKKM 486
            +  V   KK+
Sbjct: 418 AVRKVAEVKKL 428

emb|CAG89370.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_461002.1| unnamed protein product [Debaryomyces hansenii]
(415 aa)

Score: 245 bits (626), Expect: 1.72867e-63
Length: 346, Idn/Pos/Gap = 144/196/7 (41%/56%/2%)

Query: 148 DHEDDLDDAEEDEGAAQ-------ESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRP 200
           D + D D  E D  A Q       E          +VK S+     +     +    L+ 
Sbjct:  61 DLDSDYDKTENDIKALQSVGQIIGEVLKQLDDERFIVKASSGPRYIVGCRNTIKKESLKN 120

Query: 201 GDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMT 260
           G  V ++  +  I+  LP E D  V      E     F  IGGL  QI E+ E + LP+ 
Sbjct: 121 GVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPGEISFNGIGGLTDQIRELREVIELPLK 180

Query: 261 HKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARL 320
           +  LF RVGIK PKGVL+YGPPGTGKTLLA+A AA   A F+    +++V  +IG+ ARL
Sbjct: 181 NPELFTRVGIKSPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARL 240

Query: 321 VRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVR 380
           +R+ FA AK+  P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DGFD     +
Sbjct: 241 IREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTK 300

Query: 381 VLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARS 440
           V+ ATNRPD LD AL+R+GRLDRKIE   P+EA R  I +IH+ K+    +  +E + + 
Sbjct: 301 VIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTTKVAKQGEFDFEAVVKM 360

Query: 441 TDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           +D FN A ++ V  EAG  A+R +R  ++  D +     V   KK+
Sbjct: 361 SDGFNGADIRNVITEAGFFAIREERDYILQNDLMKAARKVADVKKL 406

emb|CAC27027.1| 26S proteasome AAA-ATPase subunit [Guillardia theta]
ref|NP_113458.1| 26S proteasome AAA-ATPase subunit [Guillardia theta]
pir||G90108 26S proteasome AAA-ATPase subunit [imported] - Guillardia theta nucleomorph
(395 aa)

Score: 245 bits (626), Expect: 2.00881e-63
Length: 314, Idn/Pos/Gap = 118/191/0 (37%/60%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK  T     +     ++   L   D V ++  +  I++ +  + D  ++         
Sbjct:  74 IVKAPTGTNYIVSCENRINCDILNNNDRVALDPSTLTIMKVIKNKVDPIIEEMMKSSNKK 133

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
            +   +GGL+KQI+++ E + LP  +  LF++ GIK P+G+L+YGPPGTGKTLLAR  + 
Sbjct: 134 VELYHVGGLEKQIKQIKELIELPFLNPSLFKQCGIKIPRGLLLYGPPGTGKTLLARYISC 193

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
              + FLK+ G+++V  +IG+ AR++R+ +  AK +   IIFIDE+DAIG KRF    S 
Sbjct: 194 SIDSIFLKIVGSAIVDKYIGESARIIREIYNFAKFQKRCIIFIDEVDAIGGKRFSEGSSA 253

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE  RT++ELLNQLDG+DQ ++++ + ATNRPDILD AL+R GRLDRKI  P P+    
Sbjct: 254 DREIHRTLIELLNQLDGYDQYENIKTIMATNRPDILDPALLRPGRLDRKILIPLPNRDGL 313

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
           + IL+I+ +++N    +   ++ +    +N A ++ +C EAG+ ++R +R  VI +DFI 
Sbjct: 314 SSILKIYFKRLNKKGSIDINKIIKICKYYNGADIRNLCTEAGLFSIRNERDFVIEDDFIK 373

Query: 476 GIAAVQAKKKMSLN 489
            +  +   K   ++
Sbjct: 374 AVQKINKSKDFDIS 387

gb|AAH30840.1| Psmc5 protein [Mus musculus]
(348 aa)

Score: 245 bits (626), Expect: 2.18361e-63
Length: 238, Idn/Pos/Gap = 122/168/0 (51%/70%/0%)

Query: 175 VVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERP 234
           V+VK        + +   +D++++ P   V +  DSY + + LP + D  V    V++ P
Sbjct:  85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144

Query: 235 TEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
              +  IGGLDKQI+E+ E + LP+ H  LFE +GI  PKGVL+YGPPGTGKTLLARA A
Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
             T  TF++++G+ LVQ FIG+GAR+VR+ F +A++ APSIIF+DE+D+IG+ R +    
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG 264

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDE 412
           GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD+AL+R GR+DRKIEFP P+E
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322

gb|AAS50253.1| AAL113Wp [Ashbya gossypii ATCC 10895]
ref|NP_982429.1| AAL113Wp [Eremothecium gossypii]
(432 aa)

Score: 244 bits (623), Expect: 4.90533e-63
Length: 311, Idn/Pos/Gap = 135/188/0 (43%/60%/0%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +VK S+     + +    D S+L+ G  V ++  +  I+  LP E D  V      E+  
Sbjct: 113 IVKASSGPRYIVGVRNSADRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTTFEQGE 172

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             F  IGGL +QI E+ E + LP+ +  +F+RVGI+ PKGVL+YGPPGTGKTLLA+A AA
Sbjct: 173 ISFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIQSPKGVLLYGPPGTGKTLLAKAVAA 232

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
              A F+    + +V  +IG+ AR++R+ FA AK+  P IIF+DE+DAIG +RF    S 
Sbjct: 233 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 292

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAAR 415
           DRE QRT++ELL Q+DGFD     +V+ ATNRPD LD AL+R GRLDRKIE   P+EA  
Sbjct: 293 DREIQRTLMELLTQMDGFDNLGQTKVIMATNRPDTLDPALLRPGRLDRKIEISLPNEAGM 352

Query: 416 ARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFID 475
             I +IH+ K+    +  +E   +  D FN A ++    EAG  A+R DR  +I ED + 
Sbjct: 353 LEIFKIHTAKVKKSGEFDFEAAVKMCDGFNGADIRNCVTEAGFFAIRDDRDYIIQEDLMK 412

Query: 476 GIAAVQAKKKM 486
            +  V   KK+
Sbjct: 413 AVRKVAEVKKL 423

gb|EAA40208.1| GLP_70_13103_11571 [Giardia lamblia ATCC 50803]
(510 aa)

Score: 241 bits (614), Expect: 4.47645e-62
Length: 286, Idn/Pos/Gap = 126/187/1 (44%/65%/0%)

Query: 196 SELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAV 255
           ++L  G  V  ++  Y I   LP   D  V   +VD+RP   + DIGG  KQ++ + E++
Sbjct: 206 ADLEEGMRVACDRSKYAIRFPLPPLIDPLVSLMQVDDRPNLTYRDIGGCAKQLKLIRESL 265

Query: 256 VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIG 315
            LP+ H   F  +GI+P KG+L YG PG+GKTL ARA A +T++TF+++ G+ L+  +  
Sbjct: 266 ELPLLHPQRFTNLGIEPCKGLLFYGSPGSGKTLTARAVANRTESTFIRILGSELISKYSS 325

Query: 316 DGARLVRDAFALAKKKAPSIIFIDELDAIGTKR-FDSDRSGDRETQRTMLELLNQLDGFD 374
           +GARLVR+ F+LA+ K  +I+F DE+D+ G KR  ++  +GD   QRTMLEL+ QLDGF 
Sbjct: 326 EGARLVREIFSLARTKKSAILFFDEVDSWGLKRSVNASETGDTGVQRTMLELITQLDGFK 385

Query: 375 QNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSY 434
           Q  +V+V+ A+NRPDILDAAL R GR+D+KIEF  PD+  R  I  I+ RKM+V  ++  
Sbjct: 386 QRGNVKVIMASNRPDILDAALTRPGRIDKKIEFGLPDQKGREEIYEIYLRKMSVEKNIRV 445

Query: 435 EELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
           + LAR + + + A ++++C EAGM  LR  R+++   DF+  I  V
Sbjct: 446 KLLARLSPNASGAEIRSICTEAGMYCLRDKRRLISEADFLKAINKV 491

gb|AAX69645.1| proteasome regulatory ATPase subunit 1 [Trypanosoma brucei]
gb|AAF91243.1| proteasome regulatory ATPase subunit 1 [Trypanosoma brucei]
(437 aa)

Score: 240 bits (612), Expect: 8.02766e-62
Length: 288, Idn/Pos/Gap = 132/188/5 (45%/65%/1%)

Query: 194 DVSE-LRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           D+ E +R G LVG +  S  I   LP   D  V   +V+E+P   + D+GG  +QI+ + 
Sbjct: 137 DIEESMRVGVLVGYS--SIHIEIPLPPRVDPSVSMMQVEEKPDVTYNDVGGAKEQIDRIR 194

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+T+   + ++GI PPKGVL+YGPPGTGKTLLA+A A +T ATF+++ G+ LVQ 
Sbjct: 195 EVVELPLTNPEKYTQLGIDPPKGVLLYGPPGTGKTLLAKAVANRTDATFIRVIGSELVQR 254

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+GAR++R+ F LA+ K  +IIF DE+             GD E QRTMLE++NQ+DG
Sbjct: 255 YIGEGARMIREIFQLARTKKAAIIFFDEV--DAVGGARGGGDGDDEIQRTMLEMVNQMDG 312

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD   +++V+ ATNRPD LD AL R GR+DRK+E   PD   R +ILRIH++ ++    +
Sbjct: 313 FDSRGNIKVIMATNRPDTLDPALTRPGRMDRKLEVGLPDLEGRTKILRIHAKSLSCEKAI 372

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAV 480
            +E +AR   +   A L++VC EAGM A+RA RK +  +DF+D +  V
Sbjct: 373 RFELIARLCPNATGADLRSVCTEAGMFAIRARRKTINEKDFLDAVNKV 420

gb|AAT52191.1| 26S proteasome ATPase subunit [Pisum sativum]
(211 aa)

Score: 237 bits (605), Expect: 5.70355e-61
Length: 206, Idn/Pos/Gap = 115/149/0 (55%/72%/0%)

Query: 234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC 293
           P   + D+GG  +QIE++ E V LPM H   F ++GI PPKGVL YGPPGTGKTLLARA 
Sbjct:   1 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV  60

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A +T A F+++ G+ LVQ ++G+GAR+VR+ F +A+ K   I+F DE+DAIG  RFD   
Sbjct:  61 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 120

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
            GD E QRTMLE++NQLDGFD   +++VL ATNRPD LD AL+R GRLDRK+EF  PD  
Sbjct: 121 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 180

Query: 414 ARARILRIHSRKMNVHPDVSYEELAR 439
           +R +I +IH+R MN   D+ +E LAR
Sbjct: 181 SRTQIFKIHTRTMNCERDIRFELLAR 206

gb|EAA41176.1| GLP_38_50730_51935 [Giardia lamblia ATCC 50803]
(401 aa)

Score: 232 bits (591), Expect: 2.37637e-59
Length: 296, Idn/Pos/Gap = 122/184/7 (41%/62%/2%)

Query: 198 LRPGDLVGVNKDSYLILEKLPEEYDARVKAFE------VDERPTEDFADIGGLDKQIEEV 251
           ++ G  V V+  +Y I+  LP + D  + +        V       +ADIGGL  +I+ +
Sbjct:  91 IKSGTRVSVSLSTYSIMHILPPQMDESIYSMSDAGTTGVSPEDAVTYADIGGLHDEIKLI 150

Query: 252 IEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQ 311
            E++ LP+ +  +F+RVGIKPPK +L+YG PGTGK+L+ +  A     +++K  G+ L++
Sbjct: 151 KESIELPLRNPDIFKRVGIKPPKSILLYGAPGTGKSLICKCLANSLGISYIKCVGSQLIR 210

Query: 312 MFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLD 371
            +IG+ ARLVRD FA AK K P ++ IDE+DAI TKR D     DRE  R +L+LL ++D
Sbjct: 211 KYIGESARLVRDLFAYAKLKKPCLLMIDEVDAIATKRSDDGTHNDREVDRALLQLLTEID 270

Query: 372 GFDQNDD-VRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHP 430
           GF   D+ ++++  TNRP+ LD ALMR GR D KIE   PD   R  IL+IHS+ +++  
Sbjct: 271 GFTGLDESIKIVFCTNRPEALDPALMRPGRCDVKIEIRLPDPTGRYEILKIHSKGLSLGE 330

Query: 431 DVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
           DV +  + +STD FN A L+ V  EAG+ ALRA+R  +  ED +  +A +++ K +
Sbjct: 331 DVDFAGIVKSTDGFNGADLRNVITEAGLGALRAERGEIHQEDLLAAVAVIRSNKSI 386

ref|XP_519765.1| PREDICTED: similar to conserved ATPase domain protein 44 [Pan troglodytes]
(366 aa)

Score: 231 bits (588), Expect: 5.33836e-59
Length: 294, Idn/Pos/Gap = 126/176/23 (42%/59%/7%)

Query: 193 VDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVI 252
           +D S+L+PG  V ++  +  I+  LP E D  +     ++     +++IGGL +QI E+ 
Sbjct:  87 LDKSKLKPGTRVALDMTTLTIMRYLPREVDPLIYNMSHEDPENVSYSEIGGLSEQIRELR 146

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E + LP+T+  LF+RVGI PPKG L+YGPPGTG                  +  +S+V  
Sbjct: 147 EGIELPLTNPELFQRVGIIPPKGCLLYGPPGTG------------------VVSSSIVDK 188

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ A L+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 189 YIGESAHLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 248

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+  GRLDRKI    P+E AR  IL+I    +  H ++
Sbjct: 249 FDTLHRVKMIMATNRPDTLDPALLCPGRLDRKIHIDMPNEQARLDILKIQRGPITKHGEI 308

Query: 433 SYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQAKKKM 486
            YE      + FN A L+ VC EAGM A+RAD   V+ EDF+  +  V   KK+
Sbjct: 309 DYE-----ANGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 357

gb|EAA42904.1| GLP_574_180933_182105 [Giardia lamblia ATCC 50803]
(390 aa)

Score: 227 bits (579), Expect: 6.00157e-58
Length: 318, Idn/Pos/Gap = 120/187/6 (37%/58%/1%)

Query: 174 AVVVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDER 233
           AVV  ++      + I   VD  +L+P   + + K+S  +L+ LP + +       ++ +
Sbjct:  65 AVVQASTNFGNSLVRISSSVDRLKLKPMSTLALAKNSLALLKVLPSDNEMNSNVISIEAK 124

Query: 234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC 293
           PT  +ADIGG D+   E+ EAV  P+    LF  + I+PP  VL++GPPG  K+LL +AC
Sbjct: 125 PTVTYADIGGYDQAKLELREAVEFPLKSPELFAALNIQPPNAVLLHGPPGCAKSLLVKAC 184

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A     TF+ +  +S V  ++G+G R +RD + LA++ APSIIF DE+DAI  KR DS  
Sbjct: 185 ANSCDCTFISVTSSSCVNKYLGEGPRTIRDIYRLARENAPSIIFFDEIDAIANKRGDSTT 244

Query: 354 SGDRETQRTMLELLNQLDGFDQNDD------VRVLAATNRPDILDAALMRSGRLDRKIEF 407
            GD+ET R ++ELL  LDGFD + +      V+ + ATN+P++LD AL+R+GR DRKI  
Sbjct: 245 EGDKETARILMELLTNLDGFDNDSNLNNGKIVKTIFATNKPEMLDPALLRTGRADRKIFM 304

Query: 408 PHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKV 467
            +P +  +  I +  S+ M +  DV +E      +  + A + ++C EAGM+A+RA+R  
Sbjct: 305 DYPTKRDKRLIFQTCSKDMKLANDVDFEIFVMRGEKISGAEIASICTEAGMSAIRANRYT 364

Query: 468 VIHEDFIDGIAAVQAKKK 485
           V   DF    + V +K++
Sbjct: 365 VNMADFEKAYSIVVSKRQ 382

emb|CAB97492.1| 26S proteasome ATPase subunit S4 [Giardia intestinalis]
(247 aa)

Score: 226 bits (577), Expect: 9.98406e-58
Length: 226, Idn/Pos/Gap = 114/162/0 (50%/71%/0%)

Query: 248 IEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGT 307
           I+E+ E + LP+T+   F  +GI+PP+  +++GP GTGK+LLARACA +T A ++K+AG+
Sbjct:   2 IKELEETIQLPLTNPEYFVDLGIEPPRSCILHGPSGTGKSLLARACANETSACYMKMAGS  61

Query: 308 SLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELL 367
            L+Q + G+G RLVR+ F  AK   P+IIFIDE+DA+G KR+D+D  G RE QRTMLELL
Sbjct:  62 ELIQXYSGEGPRLVRELFKAAKANQPTIIFIDEVDAVGRKRYDADSGGAREIQRTMLELL 121

Query: 368 NQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMN 427
           NQLDGFD+ + V+V+ ATN  + LD+AL+R+GR+DRKI    PD  AR +I +IH+R+M 
Sbjct: 122 NQLDGFDRTEGVKVIMATNLIESLDSALIRAGRIDRKIYVGLPDLTARRQIFKIHTRRMM 181

Query: 428 VHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           +  D+  +E+    DD + A +KA+ +EAG+ ALR  R  V   DF
Sbjct: 182 LDKDIVEDEILNCKDDLSGADIKAITLEAGLLALRDRRIRVCMSDF 227

gb|AAM29324.1| AT28212p [Drosophila melanogaster]
(270 aa)

Score: 219 bits (559), Expect: 1.10419e-55
Length: 226, Idn/Pos/Gap = 105/159/6 (46%/70%/2%)

Query: 176 VVKTSTRQTVFLPIPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPT 235
           +V ++T    ++ +   +D  +L+P   VG++K S  +++ +P E D+ +     DE+P 
Sbjct:  42 IVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPD 101

Query: 236 EDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAA 295
             ++DIGGLD Q +E+ EAV LP+TH  L++++GI PP+GVL++GPPG GKT+LA+A A 
Sbjct: 102 ISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAH 161

Query: 296 QTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSG 355
            T A+F+++ G+  VQ ++G+G R+VRD F LAK+ +PSIIFIDE+DAI TKRFD+    
Sbjct: 162 HTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGA 221

Query: 356 DRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRL 401
           DRE QR +LELLNQ+DGFD+  +++V+ ATNR      A +RSG +
Sbjct: 222 DREVQRILLELLNQMDGFDETTNIKVIMATNR------AYLRSGSV 261

ref|XP_520776.1| PREDICTED: similar to protease (prosome, macropain) 26S subunit, ATPase 1 [Pan troglodytes]
(236 aa)

Score: 218 bits (556), Expect: 2.65171e-55
Length: 212, Idn/Pos/Gap = 114/153/0 (53%/72%/0%)

Query: 274 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAP 333
           KGV++ GPPGTGKTLLA+A A QT ATFL++ G+ L+Q ++GDG +L R+ F +A+++AP
Sbjct:  16 KGVILCGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLGRELFRVAEERAP  75

Query: 334 SIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDA 393
           SI+FIDE+DAIGTKR+DS+  G+RE QRT LELLNQLDGFD   DV+ + ATN+ + LD 
Sbjct:  76 SIVFIDEIDAIGTKRYDSNSGGEREIQRTTLELLNQLDGFDSRGDVKAIMATNQIETLDP 135

Query: 394 ALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVC 453
           AL+R GR+ RKIEFP  DE  +  I +IH+ +M +  DV+  +L  + DD + A +KAVC
Sbjct: 136 ALIRPGRIGRKIEFPLRDEKTKKHIFQIHTSRMTLADDVTLHDLIMAKDDLSGADIKAVC 195

Query: 454 VEAGMAALRADRKVVIHEDFIDGIAAVQAKKK 485
            EAG+ ALR  R  V +EDF      V  KK+
Sbjct: 196 TEAGLMALRERRMKVTNEDFKKSKENVLYKKQ 227

emb|CAI59821.1| YME1 protein [Nyctotherus ovalis]
(236 aa)

Score: 216 bits (551), Expect: 1.03319e-54
Length: 212, Idn/Pos/Gap = 114/149/1 (53%/70%/0%)

Query: 274 KGVLMY-GPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKA 332
           +G L Y   PGTGKTLLARA A  T  TF++++G  LVQ +IG+GAR+VR+ F +A++ A
Sbjct:  13 QGCLYYMDRPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARMVRELFVMAREHA  72

Query: 333 PSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILD 392
           PSIIF+DE+D+IG +R +    GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD
Sbjct:  73 PSIIFMDEIDSIGGQRIEGRMGGDSEVQRTMLELLNQLDGFESTQNIKVIMATNRIDILD 132

Query: 393 AALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAV 452
            AL+R GR+DRKIE P+P+EAAR  +LRIHSRKMN+   +  +++A   +  + A  KA 
Sbjct: 133 DALLRPGRIDRKIELPNPNEAARFDVLRIHSRKMNLMRGIDLKKIASLMESASGADCKAT 192

Query: 453 CVEAGMAALRADRKVVIHEDFIDGIAAVQAKK 484
           C EAGM AL   R  V  EDF   +A V  KK
Sbjct: 193 CTEAGMFALGERRIHVTQEDFEMAVAKVMKKK 224

gb|AAG41119.1| 26S protease regulatory subunit [Amblyomma americanum]
(217 aa)

Score: 213 bits (543), Expect: 7.97944e-54
Length: 209, Idn/Pos/Gap = 115/149/3 (55%/71%/1%)

Query: 283 GTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD 342
           GTGKTLLARA A  T  TF++++G+ LVQ FIG+G+R+VR+ F +A++ APSIIF+DE+D
Sbjct:   1 GTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID  60

Query: 343 AIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLD 402
           +IG+ R D+   GD E QRTMLELLNQLDGF+   +++V+ ATNR DILD AL+R GR+D
Sbjct:  61 SIGSSRIDAGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRID 120

Query: 403 RKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           RKIEFP P+E AR  ILRIHSRKMN+   ++   +A      + A +K VC EAGM ALR
Sbjct: 121 RKIEFPPPNEEARLDILRIHSRKMNLTRGINLRRIAEMMPGASGAEVKGVCTEAGMYALR 180

Query: 463 ADRKVVIHEDFIDGIAAV---QAKKKMSL 488
             R  V  EDF   +A V    A+K MS+
Sbjct: 181 ERRVHVTQEDFEMAVAKVMQKDAEKNMSI 209

gb|AAH94063.1| Unknown (protein for IMAGE:4160213) [Mus musculus]
(215 aa)

Score: 213 bits (541), Expect: 1.52974e-53
Length: 214, Idn/Pos/Gap = 107/144/0 (50%/67%/0%)

Query: 278 MYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIF 337
           MYGPPG GKT+LA+A A  T A F+++ G+  VQ ++G+G R+VRD F LAK+ AP+IIF
Sbjct:   1 MYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIF  60

Query: 338 IDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMR 397
           IDE+DAI TKRFD+    DRE QR +LELLNQ+DGFDQN +V+V+ ATNR D LD AL+R
Sbjct:  61 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLR 120

Query: 398 SGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAG 457
            GRLDRKIEFP PD   +  I    + KMN+  +V  E+     D  + A + ++C E+G
Sbjct: 121 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESG 180

Query: 458 MAALRADRKVVIHEDFIDGIAAVQAKKKMSLNYY 491
           M A+R +R +V+ +DF      V  K +    +Y
Sbjct: 181 MLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 214

ref|YP_154225.1| cell division protein [Anaplasma marginale str. St. Maries]
gb|AAV86970.1| cell division protein [Anaplasma marginale str. St. Maries]
(610 aa)

Score: 209 bits (532), Expect: 1.76337e-52
Length: 243, Idn/Pos/Gap = 108/155/1 (44%/63%/0%)

Query: 231 DERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLA 290
           D R    F D+ G+D+  EE++E V   + H+  F+++G K PKG L+ GPPGTGKTLLA
Sbjct: 150 DNRGKVTFEDVAGIDEAKEELVEIVDF-LKHRQKFQKLGGKIPKGCLLIGPPGTGKTLLA 208

Query: 291 RACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD 350
           RA A +    F  ++G+  V+MF+G GA  VRD F   KK AP IIF+DE+DA+G  R  
Sbjct: 209 RAIAGEASVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGI 268

Query: 351 SDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHP 410
               G+ E ++T+ +LL ++DGF+ ND V ++AATNRPD+LD AL+R GR DR++    P
Sbjct: 269 GLGGGNDEREQTLNQLLVEMDGFESNDGVIIIAATNRPDVLDPALLRPGRFDRQVTISIP 328

Query: 411 DEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIH 470
           D   R +I+ +H++K+ + PDV    +AR T  F+ A L  +  EA + A R ++KVV  
Sbjct: 329 DINGREKIINVHAKKVPMAPDVDVRVVARGTPGFSGADLANLVNEAALIAARLNKKVVTM 388

Query: 471 EDF 473
            DF
Sbjct: 389 SDF 391

ref|ZP_00210507.1| COG0465: ATP-dependent Zn proteases [Ehrlichia canis str. Jake]
(611 aa)

Score: 206 bits (523), Expect: 1.91737e-51
Length: 243, Idn/Pos/Gap = 106/153/1 (43%/62%/0%)

Query: 231 DERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLA 290
           + R    F D+ G+D+  EE+IE V   + H+  F+++G K PKG L+ G PGTGKTLLA
Sbjct: 148 EHRNKVTFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLA 206

Query: 291 RACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD 350
           RA A +    F  ++G+  V+MF+G GA  VRD F   KK AP IIFIDE+DA+G  R  
Sbjct: 207 RAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGI 266

Query: 351 SDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHP 410
               G+ E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD+AL+R GR DR++    P
Sbjct: 267 GLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIP 326

Query: 411 DEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIH 470
           D   R +I+ +H +K+   PDV    +AR T  F+ A L  +  EA + A R ++K+V  
Sbjct: 327 DINGREKIINVHIKKVPTAPDVDIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTM 386

Query: 471 EDF 473
            DF
Sbjct: 387 SDF 389

ref|YP_180706.1| cell division protein FtsH [Ehrlichia ruminantium str. Welgevonden]
emb|CAI27388.1| Cell division protein ftsh homolog [Ehrlichia ruminantium str. Welgevonden]
emb|CAI28337.1| Cell division protein ftsh homolog [Ehrlichia ruminantium str. Gardel]
emb|CAH58578.1| cell division protein FtsH [Ehrlichia ruminantium str. Welgevonden]
ref|YP_196811.1| Cell division protein ftsh homolog [Ehrlichia ruminantium str. Gardel]
ref|YP_197770.1| Cell division protein ftsh homolog [Ehrlichia ruminantium str. Welgevonden]
(611 aa)

Score: 205 bits (522), Expect: 2.13705e-51
Length: 243, Idn/Pos/Gap = 105/154/1 (43%/63%/0%)

Query: 231 DERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLA 290
           + R    F D+ G+D+  EE++E V   + H+  F+++G K PKG L+ G PGTGKTLLA
Sbjct: 148 ENRNKVTFNDVAGIDEAKEELVEIVDF-LKHRQKFQKLGGKIPKGCLLIGSPGTGKTLLA 206

Query: 291 RACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD 350
           RA A +    F  ++G+  V+MF+G GA  VRD F   KK AP IIFIDE+DA+G  R  
Sbjct: 207 RAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGI 266

Query: 351 SDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHP 410
               G+ E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD+AL+R GR DR++    P
Sbjct: 267 GLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTIGIP 326

Query: 411 DEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIH 470
           D   R +I+ +H +K+   PDV+   +AR T  F+ A L  +  EA + A R ++K+V  
Sbjct: 327 DINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTM 386

Query: 471 EDF 473
            DF
Sbjct: 387 NDF 389

ref|XP_599746.1| PREDICTED: similar to conserved ATPase domain protein 44, partial [Bos taurus]
(213 aa)

Score: 205 bits (521), Expect: 2.63272e-51
Length: 180, Idn/Pos/Gap = 99/130/0 (55%/72%/0%)

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           + + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct:  34 DVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK  93

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct:  94 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 153

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 154 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 213

ref|NP_248150.1| cell division control protein 48 (cdc48), AAA family [Methanocaldococcus jannaschii DSM 2661]
gb|AAB99153.1| cell division control protein 48 (cdc48), AAA family [Methanocaldococcus jannaschii DSM 2661]
pir||C64444 cell division control protein CDC48 homolog - Methanococcus jannaschii
sp|Q58556|YB56_METJA Cell division cycle protein 48 homolog MJ1156
(903 aa)

Score: 204 bits (520), Expect: 3.38154e-51
Length: 231, Idn/Pos/Gap = 109/157/2 (47%/67%/0%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL++  +E+ EAV  P+  K +FE++G++PPKGVL++GPPGTGKTLLA+
Sbjct: 445 EVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAK 504

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A ++ A F+ + G  +   ++G+  + +R+ F  A++ AP IIF DE+DAI  KR   
Sbjct: 505 AVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRD 564

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
             S    T + + +LL +LDG ++  DV V+AATNRPDI+D AL+R GRLDR I  P PD
Sbjct: 565 LSSA--VTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPD 622

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           E AR  I +IH+R MN+  DV+ EELA+ T+ +  A ++A+C EA M A+R
Sbjct: 623 EKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVR 673


Score: 184 bits (467), Expect: 5.36007e-45
Length: 247, Idn/Pos/Gap = 110/150/6 (44%/60%/2%)

Query: 216 KLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKG 275
           +L EE  + +K  +V   P   + DIGGL +++++V E + LPM H  LFE++GI+PPKG
Sbjct: 159 ELKEEPVSEIKETKV---PDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKG 215

Query: 276 VLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSI 335
           VL+ GPPGTGKTLLA+A A +  A F  + G  ++  ++G+    +R  F  A++ APSI
Sbjct: 216 VLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSI 275

Query: 336 IFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAAL 395
           IFIDE+DAI  KR   D +     +R + +LL  +DG      V V+ ATNRP+ LD AL
Sbjct: 276 IFIDEIDAIAPKR---DEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPAL 332

Query: 396 MRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVE 455
            R GR DR+I    PD   R  IL+IH+R M +  DV  + LA  T  F  A L A+C E
Sbjct: 333 RRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKE 392

Query: 456 AGMAALR 462
           A M ALR
Sbjct: 393 AAMRALR 399

ref|NP_070126.1| cell division control protein 48, AAA family (cdc48-1) [Archaeoglobus fulgidus DSM 4304]
gb|AAB89948.1| cell division control protein 48, AAA family (cdc48-1) [Archaeoglobus fulgidus DSM 4304]
pir||H69411 cell division control protein 48, AAA family (cdc48-1) homolog - Archaeoglobus fulgidus
sp|O28972|YC97_ARCFU Cell division cycle protein 48 homolog AF1297
(733 aa)

Score: 204 bits (519), Expect: 4.72129e-51
Length: 268, Idn/Pos/Gap = 119/171/10 (44%/63%/3%)

Query: 195 VSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFADIGGLDKQIEEVIEA 254
           ++  RP  +V V +++ + L++ P E   R         P   + DIGGL +++  V E 
Sbjct: 145 ITATRPSGVVVVTRNTAIELKEKPAEEVKRAV-------PDVTYEDIGGLKRELRLVREM 197

Query: 255 VVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFI 314
           + LP+ H  LF+R+GI+PPKGVL+YGPPGTGKTL+A+A A +  A F+ ++G  ++  + 
Sbjct: 198 IELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYY 257

Query: 315 GDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFD 374
           G+  + +R+ F  AK+ APSIIFIDE+D+I  KR   + +G+ E +R + +LL  +DG +
Sbjct: 258 GESEQRLREIFEEAKENAPSIIFIDEIDSIAPKR--EEVTGEVE-RRVVAQLLALMDGLE 314

Query: 375 QNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSY 434
              DV V+AATNRPD +D AL R GR DR+IE   PD+  R  IL IH+RKM +  DV  
Sbjct: 315 ARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDL 374

Query: 435 EELARSTDDFNAAMLKAVCVEAGMAALR 462
           EELA  T+ F  A L+A+C EA M ALR
Sbjct: 375 EELAELTNGFVGADLEALCKEAAMHALR 402


Score: 191 bits (485), Expect: 4.68749e-47
Length: 231, Idn/Pos/Gap = 102/153/2 (44%/66%/0%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL+   +E++EAV  P+ +  +F    IKPP+G+L++GPPGTGKTLLA+
Sbjct: 448 EVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAK 507

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A ++ A F+ + G  L+  ++G+  + VR+ F  A++ AP +IF DE+D++  +R   
Sbjct: 508 AVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGI 567

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
             S    T+R + +LL +LDG ++  DV V+AATNRPD++D AL+R GRL+R I  P PD
Sbjct: 568 GDS--HVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPD 625

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           + AR  I +IH R   +  DV+ EELA  T+ ++ A ++AVC EAGM A+R
Sbjct: 626 KKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIR 676

ref|NP_142636.1| cell division control protein (transitional endoplasmic reticulum ATPase) [Pyrococcus horikoshii OT3]
dbj|BAA29778.1| 840aa long hypothetical cell division control protein (transitional endoplasmic reticulum ATPase) [Pyrococcus horikoshii OT3]
pir||H71114 probable cell division control protein (transitional endoplasmic reticulum ATPase) - Pyrococcus horikoshii
(840 aa)

Score: 204 bits (518), Expect: 6.37546e-51
Length: 231, Idn/Pos/Gap = 109/156/2 (47%/67%/0%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL++  +E+ EAV  P+ +   F+++GI PPKGVL+YGPPGTGKTLLA+
Sbjct: 540 EVPNVHWDDIGGLEEVKQELREAVEWPLKYPKAFKKLGITPPKGVLLYGPPGTGKTLLAK 599

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A +++A F+ + G  ++  ++G+  + +R+ F  A++ AP+IIFIDE+DAI   R  S
Sbjct: 600 AVATESEANFIAVRGPEVLSKWVGESEKRIREIFRKARQAAPAIIFIDEIDAIAPARGTS 659

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
           +  G++ T R + +LL ++DG  +N  V V+AATNRPDILD AL+R GR DR I  P PD
Sbjct: 660 E--GEKVTDRIINQLLTEMDGLVENSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPD 717

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           E AR  I ++H+R M +  DV   ELAR T+ +  A + AVC EA + ALR
Sbjct: 718 EEARFEIFKVHTRSMPLADDVDLRELARRTEGYTGADIAAVCREAALNALR 768


Score: 176 bits (447), Expect: 9.77968e-43
Length: 252, Idn/Pos/Gap = 104/151/14 (41%/59%/5%)

Query: 204 VGVNKDSYLILEKLPE---------EYDARVKAFEVDER--PTEDFADIGGLDKQIEEVI 252
           VG  +  ++++  +P+         E +   +A EV E   P   + DIGGL + I+++ 
Sbjct: 166 VGFGELKFMVVNTIPKGIVQITYNTEVEVLPQAVEVREEKIPEVTYEDIGGLKEAIQKIR 225

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+ H  LFER+GI+PPKGVL+YGPPGTGKTLLA+A A +  A F+ + G  ++  
Sbjct: 226 EMVELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSK 285

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           + G+    +R+ F  A++ AP+IIFIDE+DAI  KR   +  G+ E +R + +LL  +DG
Sbjct: 286 YYGESEERLREIFKEAEENAPAIIFIDEIDAIAPKR--EEVVGEVE-KRVVSQLLTLMDG 342

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
                 V V+ ATNRPD LD AL R GR DR+IE   PD+  R  IL+IH+R M + PD 
Sbjct: 343 LKGRGKVIVIGATNRPDALDPALRRPGRFDREIEVGVPDKQGRKEILQIHTRGMPIEPDF 402

Query: 433 SYEELARSTDDF 444
             + + +   D 
Sbjct: 403 EKDAVIKVLKDL 414

ref|ZP_00298452.1| COG0465: ATP-dependent Zn proteases [Geobacter metallireducens GS-15]
(596 aa)

Score: 203 bits (517), Expect: 8.97596e-51
Length: 239, Idn/Pos/Gap = 107/153/1 (44%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  EE +E ++  +     F ++G + PKGVL+ GPPGTGKTLLARA A + 
Sbjct: 140 FEDVAGVDEAKEE-LEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEA 198

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F   KK AP IIFIDE+DA+G  R      G  
Sbjct: 199 GVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHD 258

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR++  P PD   R  
Sbjct: 259 EREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREM 318

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDG 476
           IL++H++K  + P+V+ + +AR T  F+ A L  V  EA + A R D+ VV  +DF D 
Sbjct: 319 ILKVHTKKTPLGPNVNLDVIARGTPGFSGADLANVVNEAALLAARKDKSVVDMQDFDDA 377

emb|CAB50265.1| ATPase of the AAA+ family [Pyrococcus abyssi GE5]
ref|NP_127035.1| transitional endoplasmic reticulum atpase [Pyrococcus abyssi GE5]
pir||D75046 transitional endoplasmic reticulum atpase PAB1478 - Pyrococcus abyssi (strain Orsay)
(840 aa)

Score: 203 bits (517), Expect: 9.51583e-51
Length: 231, Idn/Pos/Gap = 109/156/2 (47%/67%/0%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL+   +E+ EAV  P+ +   F+R+GI PPKGVL+YGPPGTGKTLLA+
Sbjct: 540 EVPNVHWDDIGGLEDVKQELREAVEWPLKYPKAFKRLGITPPKGVLLYGPPGTGKTLLAK 599

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A +++A F+ + G  ++  ++G+  + +R+ F  A++ +P+IIFIDE+DAI   R  +
Sbjct: 600 AVATESQANFIAIRGPEVLSKWVGESEKRIREIFRKARQASPAIIFIDEIDAIAPARGTA 659

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
           +  G++ T R + +LL ++DG  +N  V V+AATNRPDILD AL+R GR DR I  P PD
Sbjct: 660 E--GEKVTDRIINQLLTEMDGLVENSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPD 717

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           E AR  I ++H+R M +  DV  +ELAR T+ +  A + AVC EA M ALR
Sbjct: 718 EKARFEIFKVHTRGMPLADDVDLKELARRTEGYTGADIAAVCREAAMNALR 768


Score: 180 bits (456), Expect: 1.08064e-43
Length: 252, Idn/Pos/Gap = 106/153/14 (42%/60%/5%)

Query: 204 VGVNKDSYLILEKLPE---------EYDARVKAFEVDER--PTEDFADIGGLDKQIEEVI 252
           VG  +  ++++  +P+         E +   +A EV E   P   + DIGGL + IE++ 
Sbjct: 166 VGFGELKFMVVNTIPKGIVQITYNTEVEVLPQAVEVREEKIPEVTYEDIGGLKEAIEKIR 225

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           E V LP+ H  LFER+GI+PPKGVL+YGPPGTGKTLLA+A A +  A F+ + G  ++  
Sbjct: 226 EMVELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSK 285

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           + G+    +R+ F  A++ AP+IIFIDE+DAI  KR   +  G+ E +R + +LL  +DG
Sbjct: 286 YYGESEERLREIFKEAEENAPAIIFIDEIDAIAPKR--EEVVGEVE-KRVVSQLLTLMDG 342

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
                 V V+AATNRPD LD AL R GR DR+IE   PD+  R  IL+IH+R M + PD 
Sbjct: 343 LKSRGKVIVIAATNRPDALDPALRRPGRFDREIEVGVPDKQGRKEILQIHTRGMPIEPDF 402

Query: 433 SYEELARSTDDF 444
             E + ++  + 
Sbjct: 403 EKETVIKALKEL 414

ref|YP_023234.1| cell division cycle protein 48 [Picrophilus torridus DSM 9790]
gb|AAT43041.1| cell division cycle protein 48 [Picrophilus torridus DSM 9790]
(744 aa)

Score: 203 bits (516), Expect: 1.14332e-50
Length: 252, Idn/Pos/Gap = 111/166/4 (44%/65%/1%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL+    E+ EAV LP+ +  +F+R+GI+ PKG L+YGPPGTGKTLLA+
Sbjct: 459 EVPNVKWDDIGGLENVKSELREAVELPLLNPDVFKRLGIRAPKGFLLYGPPGTGKTLLAK 518

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A ++ A F+ + G  ++  ++G+  + VR+ F  AK+ APSI+F+DE+D+I  +R  S
Sbjct: 519 AVANESNANFISIKGPEVLSKWVGESEKAVREIFKKAKQVAPSIVFLDEIDSIAPRRGAS 578

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
             SG   T+R + +LL  LDG +  + V V+AATNRPDI+D AL+R+GR D+ +  P PD
Sbjct: 579 MDSG--VTERIVNQLLTSLDGIEVLNGVVVIAATNRPDIIDPALLRAGRFDKIMYIPPPD 636

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRA--DRKVVI 469
           E  R +IL++H++ M + PDV   ELA+ TD F  A ++ +C EAGM A R+  D   V 
Sbjct: 637 EEGRYKILQVHTKNMPLAPDVDLRELAKKTDGFVGADIENLCREAGMMAYRSNPDATEVT 696

Query: 470 HEDFIDGIAAVQ 481
             DF++ +  ++
Sbjct: 697 QNDFLNALKTIR 708


Score: 162 bits (410), Expect: 2.25524e-38
Length: 277, Idn/Pos/Gap = 107/154/25 (38%/55%/9%)

Query: 227 AFEVDERPTE-DFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTG 285
           A EV E  T   + DIGGL  Q+  + E + LP+ H  LFER+GI PPKGVL+ GPPGTG
Sbjct: 176 ASEVLEEVTRVSYEDIGGLSDQLGRIREIIELPLKHPELFERLGITPPKGVLLSGPPGTG 235

Query: 286 KTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIG 345
           KTL+A+A A ++ A F  + G  ++  + G   + +R+ F  A++  PSIIFIDE+D+I 
Sbjct: 236 KTLIAKAVANESGANFYAINGPEIMSKYYGQSEQKLREIFQKAEESEPSIIFIDEIDSIA 295

Query: 346 TKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKI 405
            KR   D  G+ E +R + +LL  +DG  +   V V+ ATNR D +D AL R GR DR+I
Sbjct: 296 PKR--EDVQGEVE-RRVVAQLLTLMDGLKERGHVIVIGATNRIDAVDPALRRPGRFDREI 352

Query: 406 EFPHPDEAARARILRIHSRKMNV-----HPDVSYEELARSTDDFNAAMLKAVCVEAGMAA 460
               PD+  R  IL IH+R M +       +   E++A  T  F  A L A+  E+ M A
Sbjct: 353 TIGVPDKKGRKEILAIHTRGMPLGMTDDEKENFLEKIADLTYGFVGADLAALTRESAMNA 412

Query: 461 LRA----------------DRKVVIHEDFIDGIAAVQ 481
           LR                 ++ VV  +DF++ +  ++
Sbjct: 413 LRRYLPEIDLDKPIPTEVLEKMVVTEQDFMEALKTIE 449

ref|NP_578692.1| cell division control protein 48, aaa family [Pyrococcus furiosus DSM 3638]
gb|AAL81087.1| cell division control protein 48, aaa family; (cdc48-2) [Pyrococcus furiosus DSM 3638]
(837 aa)

Score: 202 bits (514), Expect: 1.6643e-50
Length: 231, Idn/Pos/Gap = 106/154/2 (45%/66%/0%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL++  +++ EAV  P+ +   F+R+GI PPKG+L+YGPPGTGKTLLA+
Sbjct: 537 EIPNVHWDDIGGLEEVKQQLREAVEWPLKYPKAFKRLGISPPKGILLYGPPGTGKTLLAK 596

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A +++A F+ + G  ++  ++G+  + +R+ F  A++ AP+IIFIDE+DAI   R   
Sbjct: 597 AVATESQANFIAIRGPEVLSKWVGESEKRIREIFRKARQAAPAIIFIDEIDAIAPAR--G 654

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
              G+R T R + +LL ++DG  +N  V V+ ATNRPDI+D AL+R GR DR I  P PD
Sbjct: 655 GYEGERVTDRLINQLLTEMDGIQENSGVVVIGATNRPDIIDPALLRPGRFDRLILVPAPD 714

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           E AR  I ++H+R M +  DV  +ELAR T+ +  A + AVC EA + ALR
Sbjct: 715 EKARLEIFKVHTRGMPLADDVDLKELARRTEGYTGADIAAVCREAALNALR 765


Score: 179 bits (455), Expect: 1.24533e-43
Length: 223, Idn/Pos/Gap = 102/142/5 (45%/63%/2%)

Query: 220 EYDARVKAFEVDER--PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVL 277
           E +   +A EV E   P   + DIGGL + IE++ E V LP+ H  LFER+GI+PPKGVL
Sbjct: 188 EVEVLPQAVEVREEKVPEVTYEDIGGLKEAIEKIREMVELPLKHPELFERLGIEPPKGVL 247

Query: 278 MYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIF 337
           +YGPPGTGKTLLA+A A +  A F+ + G  ++  + G+    +R+ F  A++ AP+IIF
Sbjct: 248 LYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIF 307

Query: 338 IDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMR 397
           IDE+DAI  KR   +  G+ E +R + +LL  +DG      V V+AATNRPD +D AL R
Sbjct: 308 IDEIDAIAPKR--EEVVGEVE-KRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRR 364

Query: 398 SGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARS 440
            GR DR+IE   PD+  R  IL+IH+R M + PD   E + ++
Sbjct: 365 PGRFDREIEVGVPDKQGRKEILQIHTRGMPIEPDYDKESVIKA 407

emb|CAF29732.1| CDC48 cell division cycle protein family member [Methanococcus maripaludis S2]
ref|NP_987296.1| CDC48 cell division cycle protein family member [Methanococcus maripaludis S2]
(788 aa)

Score: 202 bits (514), Expect: 1.7644e-50
Length: 234, Idn/Pos/Gap = 104/162/3 (44%/69%/1%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   ++D+GGL+   +++ EAV  P+ +K +FER+GI+PPKGVL++GPPGTGKTLLA+
Sbjct: 500 EVPNIKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAK 559

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKR-FD 350
           A A +++A F+ + G  +   ++G+  + +R+ F  A++ AP++IF DE+D++  KR  D
Sbjct: 560 AVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMD 619

Query: 351 SDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHP 410
              SG   T++ + +LL +LDG ++  DV ++AATNRPDILD AL+R GRLDR +  P P
Sbjct: 620 FGSSG--VTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIP 677

Query: 411 DEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRAD 464
           +E AR  I ++H++ M +  DV+ E+LA+ T  +  A ++AVC EA M ALR +
Sbjct: 678 NETARLEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALREN 731


Score: 169 bits (427), Expect: 2.57584e-40
Length: 198, Idn/Pos/Gap = 90/131/3 (45%/66%/1%)

Query: 234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC 293
           P   + DIGGL ++++++ E V LPM +  LF+++GI+PPKGVL+ GPPGTGKTLLA+A 
Sbjct: 172 PNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAV 231

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A +  A F  + G  ++  ++G+    +R  F  A++ +PSIIFIDE+DA+  KR   + 
Sbjct: 232 ANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKR--DEA 289

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
           SG+ E +R + +LL  +DG +    + +LAATNRPD +D AL R GRLDR+I    PD  
Sbjct: 290 SGEVE-RRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRH 348

Query: 414 ARARILRIHSRKMNVHPD 431
            R  IL+IH+R M + PD
Sbjct: 349 GRNEILQIHTRNMPLQPD 366

ref|ZP_00208042.1| COG0465: ATP-dependent Zn proteases [Magnetospirillum magnetotacticum MS-1]
(639 aa)

Score: 202 bits (513), Expect: 2.30437e-50
Length: 236, Idn/Pos/Gap = 106/153/1 (44%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  +E +E +V  +     F+R+G K PKG L+ GPPGTGKTLLARA A + 
Sbjct: 154 FEDVAGIDEAKQE-LEEIVEFLKDPQKFQRLGGKIPKGCLLVGPPGTGKTLLARAIAGEA 212

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F   KK AP IIFIDE+DA+G  R      G+ 
Sbjct: 213 NVPFFTISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGND 272

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR++  P+PD   R +
Sbjct: 273 EREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVTVPNPDILGREK 332

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           I+++H RK+ + PDV    +AR T  F+ A L  +  EA + A RA ++VV   +F
Sbjct: 333 IIKVHMRKVPLSPDVDARIIARGTPGFSGADLANLVNEAALLAARAGKRVVTMAEF 388

ref|XP_615717.1| PREDICTED: similar to Psmc6 protein, partial [Bos taurus]
(313 aa)

Score: 202 bits (513), Expect: 2.32368e-50
Length: 180, Idn/Pos/Gap = 99/130/0 (55%/72%/0%)

Query: 253 EAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQM 312
           + + LP+T+  LF+RVGI PPKG L+YGPPGTGKTLLARA A+Q    FLK+  +S+V  
Sbjct: 134 DVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 193

Query: 313 FIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDG 372
           +IG+ ARL+R+ F  A+   P IIF+DE+DAIG +RF    S DRE QRT++ELLNQ+DG
Sbjct: 194 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG 253

Query: 373 FDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDV 432
           FD    V+++ ATNRPD LD AL+R GRLDRKI    P+E AR  IL+IH+  +  H ++
Sbjct: 254 FDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEI 313

ref|NP_422020.1| cell division protein FtsH [Caulobacter crescentus CB15]
gb|AAK25188.1| cell division protein FtsH [Caulobacter crescentus CB15]
pir||H87648 cell division protein FtsH [imported] - Caulobacter crescentus
(626 aa)

Score: 202 bits (513), Expect: 2.79188e-50
Length: 255, Idn/Pos/Gap = 109/162/4 (42%/63%/1%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  EE+ E V   +     F+R+G K PKG L+ GPPGTGKTL+ARA A + 
Sbjct: 150 FEDVAGVDEAKEELQEVVDF-LKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARAVAGEA 208

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      G+ 
Sbjct: 209 GVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGND 268

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ + ++AATNRPD+LD AL+R GR DR++  P+PD A R +
Sbjct: 269 EREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVAGREK 328

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF---I 474
           I+R+H + + +  DV  + LAR T  F+ A L  +  EA + A R +R++V  +DF    
Sbjct: 329 IIRVHMKNVPLAADVDVKTLARGTPGFSGADLANLVNEAALMAARKNRRMVTMQDFEQAK 388

Query: 475 DGIAAVQAKKKMSLN 489
           D +     ++ M++N
Sbjct: 389 DKVMMGAERRSMAMN 403

ref|NP_376061.1| hypothetical SAV protein [Sulfolobus tokodaii str. 7]
dbj|BAB65170.1| 689aa long hypothetical SAV protein [Sulfolobus tokodaii str. 7]
(689 aa)

Score: 201 bits (512), Expect: 2.9846e-50
Length: 288, Idn/Pos/Gap = 121/174/15 (42%/60%/5%)

Query: 184 TVFLPIPGLV---DVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFAD 240
           TV +P+ G      V ++RP  +V V+ ++ + + + P E  AR         P   + D
Sbjct:  63 TVLIPVLGQAIPFTVVQVRPQGIVIVSDETSITISEKPAE-QARY--------PRVTYED 113

Query: 241 IGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKAT 300
           IGG+   I+++ E V LP+ H  LF+R+GI+PPKG+L+YGPPG GKTLLA+A A +T+A 
Sbjct: 114 IGGMKHIIQKIRELVELPLKHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAVANETEAY 173

Query: 301 FLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQ 360
           F  + G  ++  F G+  + +R+ F  AKK AP+IIFIDE+DAI  KR   D       +
Sbjct: 174 FTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDAIAPKR---DEVIGEVER 230

Query: 361 RTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILR 420
           R + +LL  +DG +   +V V+AATNRP+ +D AL R GR DR+IE P PD+  R  IL+
Sbjct: 231 RVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQGRLEILQ 290

Query: 421 IHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVV 468
           IH+R M +  DV  E+LA  T  +  A L A+  EA M ALR   +V+
Sbjct: 291 IHTRNMPLSKDVDLEKLAEMTHGYTGADLSALVREAAMNALRRYLQVI 338


Score: 195 bits (496), Expect: 2.56988e-48
Length: 262, Idn/Pos/Gap = 107/169/12 (40%/64%/4%)

Query: 213 ILEKLPEEYDARVKAFE----------VDERPTEDFADIGGLDKQIEEVIEAVVLPMTHK 262
           ILEK+    D  +KAF+            E P   ++DIGGL+   EE+ E V  P+ ++
Sbjct: 349 ILEKMEVNMDDFLKAFKEIVPSGLREIYVEVPEVHWSDIGGLEDVKEELREVVEYPLKYR 408

Query: 263 HLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVR 322
             +E VGI+PPKG+L++GPPGTGKT+LA+A A ++ A F+ + G  ++  ++G+  + +R
Sbjct: 409 EAYENVGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIR 468

Query: 323 DAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVL 382
           + F  A++ AP++IF DE+DAI   R  +  SG   T+R + +LL ++DG ++ ++V ++
Sbjct: 469 EIFRKARQAAPTVIFFDEIDAIAPMRGLTTDSG--VTERIVNQLLAEMDGIEKLENVVII 526

Query: 383 AATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTD 442
           AATNRPDILD AL+R GR DR I  P PD+ ARA IL++H+R + +  D++ +ELA  T+
Sbjct: 527 AATNRPDILDPALLRPGRFDRLIYVPPPDKRARAEILKVHTRNVPLAEDITLDELAEKTE 586

Query: 443 DFNAAMLKAVCVEAGMAALRAD 464
            +  A L A+  EA + A+R +
Sbjct: 587 GYTGADLAALVREATLRAIREE 608

ref|NP_341734.1| AAA family ATPase [Sulfolobus solfataricus P2]
gb|AAK40524.1| AAA family ATPase [Sulfolobus solfataricus P2]
pir||E90158 AAA family ATPase [imported] - Sulfolobus solfataricus
(769 aa)

Score: 201 bits (512), Expect: 3.32654e-50
Length: 282, Idn/Pos/Gap = 119/166/15 (42%/58%/5%)

Query: 184 TVFLPIPGLV---DVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFAD 240
           TV +P+ G      V +++P  +V VN D+ + +   P          E    P   + D
Sbjct: 143 TVLIPVLGQAIPFTVVQVKPAGIVLVNDDTIISISDKP---------VEPSRYPRVTYED 193

Query: 241 IGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKAT 300
           IGG+   IE+V E V LP+ H  LF+R+GI+PPKG+L+YGPPG GKTLLA+A A +T A 
Sbjct: 194 IGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAIANETDAY 253

Query: 301 FLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQ 360
           F  + G  ++  F G+  + +R+ F  AKK AP+IIF+DE+DAI  KR   D       +
Sbjct: 254 FTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPKR---DEVIGEVER 310

Query: 361 RTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILR 420
           R + +LL  +DG +   +V V+AATNRP  +D AL R GR DR+IE P PD+  R  IL+
Sbjct: 311 RVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLPDKQGRLEILQ 370

Query: 421 IHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           IH+R M +  DV  E+LA  T  +  A L A+  EA M +LR
Sbjct: 371 IHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLR 412


Score: 181 bits (458), Expect: 6.07647e-44
Length: 238, Idn/Pos/Gap = 100/157/2 (42%/65%/0%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL++  EE+ E V  P+ +  L++  GI+PPKG+L++GPPGTGKT+LA+
Sbjct: 458 EVPEVKWTDIGGLEEIKEELKEVVEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAK 517

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A ++ A F+ + G  ++  ++G+  + VR+ F  A+  AP++IF DE+D+I   R  S
Sbjct: 518 AVATESGANFIAVRGPEILSKWVGESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGIS 577

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
             SG   T+R + +LL ++DG ++ ++V V+AATNRPDILD AL+R GR ++ I  P PD
Sbjct: 578 YDSG--VTERIVNQLLAEMDGIEKLENVVVIAATNRPDILDPALLRPGRFEKLIYVPPPD 635

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVI 469
           + AR  IL++H+R + +  D+S E++A  T+ +  A L A+  EA M A+R   K+ I
Sbjct: 636 KRARTEILKVHTRNIALGEDISLEDVAEKTEGYTGADLAALVREATMRAIRESMKICI 693

gb|AAK89695.1| AGR_L_2253p [Agrobacterium tumefaciens str. C58]
pir||E98271 metalloproteinase ftsH (AJ243808) [imported] - Agrobacterium tumefaciens (strain C58, Cereon)
ref|NP_356910.1| hypothetical protein AGR_L_2253 [Agrobacterium tumefaciens str. C58]
(662 aa)

Score: 201 bits (512), Expect: 3.67686e-50
Length: 242, Idn/Pos/Gap = 107/158/7 (44%/65%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   + +EE++E +  P      F+R+G K P+GVL+ GPPGTGKTLLAR+ A
Sbjct: 171 FDDVAGVDEAKQDLEEIVEFLRDPQK----FQRLGGKIPRGVLLVGPPGTGKTLLARSVA 226

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      
Sbjct: 227 GEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGG 286

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ + ++AATNRPD+LD AL+R GR DR++  P+PD   
Sbjct: 287 GNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDIVG 346

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R RIL++H R + + P+V  + LAR T  F+ A L  +  EA + A R +++VV  ++F 
Sbjct: 347 RERILKVHVRNVPLAPNVDLKILARGTPGFSGADLMNLVNEAALMAARRNKRVVTMQEFE 406

Query: 475 DG 476
           D 
Sbjct: 407 DA 408

ref|NP_534204.1| metalloprotease [Agrobacterium tumefaciens str. C58]
gb|AAL44520.1| metalloprotease [Agrobacterium tumefaciens str. C58]
pir||AB3013 metalloproteinase [imported] - Agrobacterium tumefaciens  (strain C58, Dupont)
(648 aa)

Score: 201 bits (512), Expect: 3.67686e-50
Length: 242, Idn/Pos/Gap = 107/158/7 (44%/65%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   + +EE++E +  P      F+R+G K P+GVL+ GPPGTGKTLLAR+ A
Sbjct: 157 FDDVAGVDEAKQDLEEIVEFLRDPQK----FQRLGGKIPRGVLLVGPPGTGKTLLARSVA 212

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      
Sbjct: 213 GEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGG 272

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ + ++AATNRPD+LD AL+R GR DR++  P+PD   
Sbjct: 273 GNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDIVG 332

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R RIL++H R + + P+V  + LAR T  F+ A L  +  EA + A R +++VV  ++F 
Sbjct: 333 RERILKVHVRNVPLAPNVDLKILARGTPGFSGADLMNLVNEAALMAARRNKRVVTMQEFE 392

Query: 475 DG 476
           D 
Sbjct: 393 DA 394

gb|AAW70741.1| ATP-dependent Zn protease, HflB [Wolbachia endosymbiont strain TRS of Brugia malayi]
ref|YP_197983.1| ATP-dependent Zn protease, HflB [Wolbachia endosymbiont strain TRS of Brugia malayi]
(609 aa)

Score: 201 bits (511), Expect: 4.2727e-50
Length: 236, Idn/Pos/Gap = 105/152/1 (44%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  EE++E V   +  +  F+ +G K PKG L+ G PGTGKTLLARA A + 
Sbjct: 153 FDDVAGIDEAKEELVEIVDF-LKQRQKFQVLGGKIPKGCLLIGSPGTGKTLLARAIAGEA 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F   KK AP IIFIDE+DA+G  R      G+ 
Sbjct: 212 NVPFFSISGSDFVEMFVGVGASRVRDMFDQGKKNAPCIIFIDEIDAVGRHRGIGLGGGND 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR+I    PD   R R
Sbjct: 272 EREQTLNQLLVEMDGFESNEGVIIVAATNRPDVLDPALLRPGRFDRQITISLPDINGRER 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL  H +K+++ PDV+ + +AR T  F+ A L  +  E+ + A R ++K+V  +DF
Sbjct: 332 ILNTHIKKISIAPDVNVKTVARGTPGFSGADLANLVNESALIAARRNKKIVTMDDF 387

ref|ZP_00372641.1| cell division protein FtsH [Wolbachia endosymbiont of Drosophila simulans]
gb|EAL59841.1| cell division protein FtsH [Wolbachia endosymbiont of Drosophila simulans]
(487 aa)

Score: 201 bits (511), Expect: 4.49205e-50
Length: 236, Idn/Pos/Gap = 104/152/1 (44%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  EE++E V   +  +  F+ +G K PKG L+ G PGTGKTLLARA A + 
Sbjct: 153 FDDVAGIDEAKEELVEIVDF-LKQRQKFQILGGKIPKGCLLIGSPGTGKTLLARAIAGEA 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F   KK AP IIFIDE+DA+G  R      G+ 
Sbjct: 212 NVPFFSISGSDFVEMFVGVGASRVRDMFDQGKKNAPCIIFIDEIDAVGRHRGIGLGGGND 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR+I    PD   R +
Sbjct: 272 EREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDPALLRPGRFDRQITISLPDINGREK 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL  H +K+++ PDV+ + +AR T  F+ A L  +  E+ + A R ++K+V  +DF
Sbjct: 332 ILNTHIKKISIAPDVNVKTVARGTPGFSGADLANLVNESALIAARRNKKIVTMDDF 387

emb|CAD15228.1| PROBABLE ATP-DEPENDENT ZINC METALLOPEPTIDASE (CELL DIVISION FTSH) TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
ref|NP_519647.1| PROBABLE ATP-DEPENDENT ZINC METALLOPEPTIDASE (CELL DIVISION FTSH) TRANSMEMBRANE PROTEIN [Ralstonia solanacearum GMI1000]
(628 aa)

Score: 201 bits (510), Expect: 5.09095e-50
Length: 239, Idn/Pos/Gap = 108/154/1 (45%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV+E V   +     F+++G + P+GVL+ GPPGTGKTLLARA A + 
Sbjct: 153 FADVAGCDESKEEVVELVDF-LKDPQKFQKLGGRIPRGVLLVGPPGTGKTLLARAIAGEA 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK+AP I+FIDE+DA+G  R      G+ 
Sbjct: 212 KVPFFSISGSDFVEMFVGVGAARVRDMFENAKKQAPCIVFIDEIDAVGRHRGAGMGGGND 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF+ N  V V+AATNR D+LD AL+R GR DR++    PD   R +
Sbjct: 272 EREQTLNQMLVEMDGFEANSGVIVIAATNRADVLDKALLRPGRFDRQVYVGLPDIRGREQ 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDG 476
           IL++H RK+ +  DV    LAR T  F+ A L  +  EA + A R +++VV  +DF D 
Sbjct: 332 ILKVHMRKVPIGNDVDASVLARGTPGFSGADLANLVNEAALFAARRNKRVVDMQDFEDA 390

ref|YP_181136.1| ATP-dependent metalloprotease FtsH [Dehalococcoides ethenogenes 195]
gb|AAW40316.1| ATP-dependent metalloprotease FtsH [Dehalococcoides ethenogenes 195]
(608 aa)

Score: 201 bits (510), Expect: 5.17662e-50
Length: 260, Idn/Pos/Gap = 114/163/2 (43%/62%/0%)

Query: 223 ARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPP 282
           ++ K F +D +PT  FA++ G+D+  +EV E V   +  +  F+ +G + PKG+L+ GPP
Sbjct: 144 SKAKLFNMD-KPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPP 201

Query: 283 GTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD 342
           GTGKTLLA+A A +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+D
Sbjct: 202 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEID 261

Query: 343 AIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLD 402
           A+G +R      G  E ++T+ ++L ++DGFD +  V V+AATNRPDILD AL+R GR D
Sbjct: 262 AVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFD 321

Query: 403 RKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           R++    PD   R  IL+IH++   +   V+ E LA+ T  F+ A L  +  EA + A R
Sbjct: 322 RRVVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAAR 381

Query: 463 ADRKVVIHEDFIDGIAAVQA 482
            +RKVV  ED  + I  V A
Sbjct: 382 KNRKVVETEDLEESIDRVIA 401

emb|CAH77782.1| tat-binding protein homolog, putative [Plasmodium chabaudi]
(211 aa)

Score: 200 bits (509), Expect: 6.43074e-50
Length: 208, Idn/Pos/Gap = 107/149/5 (51%/71%/2%)

Query: 284 TGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDA 343
           TGKTLLARA  A    TF++++G+ LVQ +IG+G+R+VR+ F +A++ APSIIF+DE+D+
Sbjct:   1 TGKTLLARA-VAHHDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS  59

Query: 344 IGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDR 403
           IG++R + +  GD E QRTM+ELLNQLDGF+   +++V+  TNR DILD AL+R GR+DR
Sbjct:  60 IGSQRIEGEH-GDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDDALLRPGRIDR 118

Query: 404 KIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRA 463
           KIEFP+P+  AR  IL+IHSRKMN+   +   ++A   ++ + A +KAVC EAGM ALR 
Sbjct: 119 KIEFPNPNVEARIEILKIHSRKMNLMRGIDMVKIATDMNNCSGAEVKAVCTEAGMFALRE 178

Query: 464 DRKVVIHEDFIDGIAAV---QAKKKMSL 488
            R  V  EDF   +A V    A+K  +L
Sbjct: 179 RRVHVTQEDFEMAVAKVMKQDAEKNFTL 206

dbj|BAD46074.1| putative 26S protease regulatory subunit 6B [Oryza sativa (japonica cultivar-group)]
dbj|BAD45959.1| putative 26S protease regulatory subunit 6B [Oryza sativa (japonica cultivar-group)]
(448 aa)

Score: 200 bits (508), Expect: 8.46918e-50
Length: 303, Idn/Pos/Gap = 132/180/10 (43%/59%/3%)

Query: 189 IPGLVDVSELRPGDLVGVNKDSYLILEKLPEEYDARVKA-FEVDE--RPTEDFADIGGLD 245
           + G +D   L+P   V +N  S  ++   P +  A   A F V +  +P   + DIGG +
Sbjct: 137 VAGSLDRGLLKPSANVALNGRSLALVGVPPSDVAACSAARFLVADADKPGVAYDDIGGCE 196

Query: 246 KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA 305
            Q  EV EAV LP+TH  LF   G+ PP+GVL++GP GTGKT+LA+A A +T A F ++ 
Sbjct: 197 AQKREVREAVELPLTHPELFAAAGVDPPRGVLLHGPLGTGKTMLAKAVARETSAAFFRVN 256

Query: 306 GTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKR---FDSDRSGDRETQRT 362
              L +    DG R+VRD F LA+  AP+I+FIDE+DAI   R    D D    R  QR 
Sbjct: 257 AAELARH---DGPRVVRDLFRLARDMAPAIVFIDEVDAIAAARQGGDDDDGGARRHVQRV 313

Query: 363 MLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR-ILRI 421
           ++ELL Q+DGFD++ +VRV+ ATNR D LD AL+R GRLDRK+EF  P+     R +L+ 
Sbjct: 314 LIELLTQMDGFDESTNVRVIMATNRADDLDPALLRPGRLDRKVEFTAPESPEEKRLVLQT 373

Query: 422 HSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGIAAVQ 481
            +  M++  DV  + LA   D  +AA + AVC +AGM A+R  R  V  +DF  G  AV 
Sbjct: 374 CTAGMSLDGDVDLDALAARRDKLSAAEIAAVCRKAGMQAVRDRRGAVTADDFDKGYLAVV 433

Query: 482 AKK 484
            KK
Sbjct: 434 GKK 436

ref|NP_623566.1| ATP-dependent Zn proteases [Thermoanaerobacter tengcongensis MB4]
gb|AAM25170.1| ATP-dependent Zn proteases [Thermoanaerobacter tengcongensis MB4]
(510 aa)

Score: 200 bits (508), Expect: 8.6117e-50
Length: 278, Idn/Pos/Gap = 115/171/14 (41%/61%/5%)

Query: 215 EKLPEEYDARVKAFEVDERPTED-----FADIGGLDKQIEEVIEAVVLPMTHKHLFERVG 269
           E +P +Y++     E++E  T+      F D+ GLD+ IEE ++ ++  MT+   + ++G
Sbjct:  58 ELMPVKYNSLS---EINEEVTKKKGNITFKDVAGLDEVIEE-LKVIIDFMTNTEKYNKMG 113

Query: 270 IKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAK 329
            K PKG+L YGPPGTGKTLLA A A +T +TF+  +G+  V+ ++G GA  +R  FA AK
Sbjct: 114 AKIPKGILFYGPPGTGKTLLATALAGETNSTFISASGSEFVEKYVGVGASRIRALFAKAK 173

Query: 330 KKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPD 389
           K APSIIFIDE+DA+GTKR   + S   E  +T+ +LL ++DGF+ N+ + V+ ATNR D
Sbjct: 174 KNAPSIIFIDEIDAVGTKRNTDNNS---EKDQTLNQLLVEMDGFNSNEGIIVIGATNRID 230

Query: 390 ILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAML 449
           +LD AL+R GR DR I    P+   R  IL++H+R   +   VS  +LAR T     A L
Sbjct: 231 MLDEALLRPGRFDRTIHIGPPNLKGRLEILKVHTRNKPLDESVSLVDLARKTHGMTGAHL 290

Query: 450 KAVCVEAGMAALRADRKVVIHEDFIDGIAAVQA--KKK 485
             +C EA + A+  ++  +  E+F + +  V A  KKK
Sbjct: 291 ATMCNEAAILAVMRNKTKIGKEEFEEALERVIAGLKKK 328

ref|ZP_00091237.1| COG0465: ATP-dependent Zn proteases [Azotobacter vinelandii]
(637 aa)

Score: 200 bits (508), Expect: 1.04336e-49
Length: 236, Idn/Pos/Gap = 110/153/1 (46%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +     F+R+G + P+GVLM GPPGTGKTLLA+A A + 
Sbjct: 153 FADVAGCDEAKEEVSELVEF-LRDPGKFQRLGGRIPRGVLMVGPPGTGKTLLAKAIAGEA 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      G  
Sbjct: 212 KVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHD 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ ND + V+AATNRPD+LD AL+R GR DR++    PD   R +
Sbjct: 272 EREQTLNQLLVEMDGFEMNDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDIRGREQ 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H RK+ V  DV+   +AR T  F+ A L  +  EA + A RA++++V   +F
Sbjct: 332 ILKVHMRKVPVSEDVNPAVIARGTPGFSGADLANLVNEASLFAARANKRIVEMREF 387

ref|ZP_00008180.1| COG0465: ATP-dependent Zn proteases [Rhodobacter sphaeroides 2.4.1]
(633 aa)

Score: 199 bits (507), Expect: 1.07877e-49
Length: 236, Idn/Pos/Gap = 107/151/1 (45%/63%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  EE +E +V  + +   F R+G K PKG L+ GPPGTGKTLLARA A + 
Sbjct: 153 FDDVAGIDEAKEE-LEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEA 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F  AKK AP I+FIDE+DA+G  R      G+ 
Sbjct: 212 GVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRARGVGIGGGND 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ V ++AATNR D+LD AL+R GR DR I  P+PD   R +
Sbjct: 272 EREQTLNQLLVEMDGFEANEGVIIVAATNRKDVLDPALLRPGRFDRTIHVPNPDIKGREK 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL +H+RK+ + P+V    +AR T  F+ A L  +  EA + A R  R+ V  +DF
Sbjct: 332 ILSVHARKVPLGPNVDLRLIARGTPGFSGADLMNLVNEAALLAARVGRRFVTMDDF 387

gb|AAV96340.1| ATP-dependent metalloprotease FtsH [Silicibacter pomeroyi DSS-3]
ref|YP_168308.1| ATP-dependent metalloprotease FtsH [Silicibacter pomeroyi DSS-3]
(639 aa)

Score: 199 bits (507), Expect: 1.27468e-49
Length: 236, Idn/Pos/Gap = 108/149/1 (45%/63%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  EE +E +V  + +   F R+G K PKG L+ GPPGTGKTLLARA A + 
Sbjct: 155 FDDVAGIDEAKEE-LEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEA 213

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F  AKK AP I+FIDE+DA+G  R      G+ 
Sbjct: 214 GVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGND 273

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ V +LAATNR D+LD AL+R GR DR +   +PD   R +
Sbjct: 274 EREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREK 333

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL +H+RK  + PDV    +AR T  F+ A L  +  EA + A R  R+ V  EDF
Sbjct: 334 ILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDF 389

ref|NP_952859.1| cell division protein FtsH [Geobacter sulfurreducens PCA]
gb|AAR35186.1| cell division protein FtsH [Geobacter sulfurreducens PCA]
(614 aa)

Score: 199 bits (506), Expect: 1.45673e-49
Length: 239, Idn/Pos/Gap = 106/149/1 (44%/62%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  EE +E ++  +     F ++G + PKGVL+ GPPGTGKTLLARA A + 
Sbjct: 156 FEDVAGVDEAKEE-LEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEA 214

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F   KK AP IIFIDE+DA+G  R      G  
Sbjct: 215 GVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHD 274

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR++  P PD   R  
Sbjct: 275 EREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREM 334

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDG 476
           IL++H++K  +  DV    +AR T  F+ A L  V  EA + A R D+  V  +DF D 
Sbjct: 335 ILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMKDFDDA 393

ref|NP_240199.2| cell division protein FtsH [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
sp|P57462|FTSH_BUCAI Cell division protein ftsH
(611 aa)

Score: 199 bits (505), Expect: 1.87106e-49
Length: 251, Idn/Pos/Gap = 110/158/7 (43%/62%/2%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +     F+++G K PKG+LM GPPGTGKTLLA+A A + 
Sbjct: 151 FADVAGCDEAKEEVSELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEA 209

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  ++K AP IIFIDE+DA+G +R      G  
Sbjct: 210 KVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHD 269

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGFD N+ + ++AATNRPD+LD AL+R GR DR++    PD   R +
Sbjct: 270 EREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQ 329

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGI 477
           IL++H RK+ +  DV    +AR T  F+ A L  +  EA + A R D++VV   +F    
Sbjct: 330 ILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEF---- 385

Query: 478 AAVQAKKKMSL 488
              +AK KM +
Sbjct: 386 --ERAKDKMMM 394

ref|NP_439486.1| cell division protein [Haemophilus influenzae Rd KW20]
gb|AAC22979.1| cell division protein (ftsH) [Haemophilus influenzae Rd KW20]
sp|P71377|FTSH1_HAEIN Cell division protein ftsH homolog 1
(635 aa)

Score: 199 bits (505), Expect: 2.05092e-49
Length: 236, Idn/Pos/Gap = 109/150/1 (46%/63%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +   + F+ +G K PKG+LM GPPGTGKTLLARA A + 
Sbjct: 150 FADVAGCDEAKEEVGEIVDF-LRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAGEA 208

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP +IFIDE+DA+G +R      G  
Sbjct: 209 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHD 268

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF  ND V V+AATNRPD+LD AL R GR DR++    PD   R +
Sbjct: 269 EREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQ 328

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H RK++V  DV    LAR T  ++ A L  +  EA + A R +++ V   +F
Sbjct: 329 ILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEF 384

ref|ZP_00157303.2| COG0465: ATP-dependent Zn proteases [Haemophilus influenzae R2866]
(635 aa)

Score: 199 bits (505), Expect: 2.0681e-49
Length: 236, Idn/Pos/Gap = 109/150/1 (46%/63%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +   + F+ +G K PKG+LM GPPGTGKTLLARA A + 
Sbjct: 150 FADVAGCDEAKEEVGEIVDF-LRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAGEA 208

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP +IFIDE+DA+G +R      G  
Sbjct: 209 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHD 268

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF  ND V V+AATNRPD+LD AL R GR DR++    PD   R +
Sbjct: 269 EREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQ 328

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H RK++V  DV    LAR T  ++ A L  +  EA + A R +++ V   +F
Sbjct: 329 ILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEF 384

ref|NP_143672.1| transitional endoplasmic reticulum ATPase [Pyrococcus horikoshii OT3]
dbj|BAA30961.1| 798aa long hypothetical transitional endoplasmic reticulum ATPase [Pyrococcus horikoshii OT3]
pir||B71196 probable transitional endoplasmic reticulum ATPase - Pyrococcus horikoshii
(798 aa)

Score: 199 bits (505), Expect: 2.1029e-49
Length: 231, Idn/Pos/Gap = 107/151/3 (46%/65%/1%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL++  +E+ EAV  P+ +   F   GI PPKGVL+YGPPGTGKTLLA+
Sbjct: 512 EVPNVHWDDIGGLEEVKQELREAVEWPLKYPEAFRAYGITPPKGVLLYGPPGTGKTLLAK 571

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A +++A F+ + G  ++  ++G+  + +R+ F  A++ AP++IFIDE+DAI  +R   
Sbjct: 572 AVATESEANFIAVRGPEVLSKWVGESEKNIREIFRKARQAAPTVIFIDEIDAIAPRR--- 628

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
               +R T R + +LL ++DG  +N  V V+AATNRPDILD AL+R GR DR I  P PD
Sbjct: 629 GTDVNRVTDRLINQLLTEMDGIQENTGVVVIAATNRPDILDPALLRPGRFDRLILVPAPD 688

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           E AR  I ++H+R M +  DV   ELAR T+ +  A + AVC EA M A+R
Sbjct: 689 EEARFEIFKVHTRSMPLADDVDLRELARRTEGYTGADIAAVCREAAMIAMR 739


Score: 179 bits (453), Expect: 2.40742e-43
Length: 222, Idn/Pos/Gap = 99/142/13 (44%/63%/5%)

Query: 228 FEVDERPTED----------FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVL 277
           F++ E+P ++          + DIGGL   IE++ E + LP+ H  LFE++GI+PPKGVL
Sbjct: 164 FDISEKPVKEVEKRMTTGVTYEDIGGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVL 223

Query: 278 MYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIF 337
           +YGPPGTGKTLLA+A A +  A F+ + G  ++  + G+    +R+ F  A++ APSIIF
Sbjct: 224 LYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPSIIF 283

Query: 338 IDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMR 397
           IDE+DAI  KR  S+ +G+ E +R + +LL  +DG      V V+ ATNRPD LD AL R
Sbjct: 284 IDEIDAIAPKR--SEVTGEVE-KRVVAQLLALMDGLKGRGKVIVIGATNRPDALDPALRR 340

Query: 398 SGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELAR 439
            GR DR+IE   PD+  R  IL+IH+R M + PD   E++ +
Sbjct: 341 PGRFDREIEVGVPDKQGRKEILQIHTRGMPIEPDFRKEDVLK 382

ref|YP_155364.1| Membrane ATP-dependent Zn proteases [Idiomarina loihiensis L2TR]
gb|AAV81815.1| Membrane ATP-dependent Zn proteases [Idiomarina loihiensis L2TR]
(648 aa)

Score: 199 bits (505), Expect: 2.1562e-49
Length: 243, Idn/Pos/Gap = 111/155/1 (45%/63%/0%)

Query: 231 DERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLA 290
           +E+    F D+ G D+  EEV E V   +     F+R+G K PKGVLM GPPGTGKTLLA
Sbjct: 150 EEQSKTTFKDVAGCDEAKEEVSELVDY-LKDPSKFQRLGGKIPKGVLMVGPPGTGKTLLA 208

Query: 291 RACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD 350
           +A + + K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDELDA+G +R  
Sbjct: 209 KAISGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDELDAVGRQRGA 268

Query: 351 SDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHP 410
               G  E ++T+ ++L ++DGF+ N+ + V+AATNRPD+LD AL+R GR DR++    P
Sbjct: 269 GLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVIVGLP 328

Query: 411 DEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIH 470
           D   R +IL++H RK+ +  DV    +AR T  F+ A L  +  EA + A R D++VV  
Sbjct: 329 DVRGREQILKVHMRKVPLGDDVKPSVIARGTPGFSGADLANLVNEAALFAARGDKRVVSM 388

Query: 471 EDF 473
           E+F
Sbjct: 389 EEF 391

gb|AAC65728.1| cell division protein (ftsH) [Treponema pallidum subsp. pallidum str. Nichols]
ref|NP_219202.1| cell division protein (ftsH) [Treponema pallidum subsp. pallidum str. Nichols]
pir||H71285 probable cell division protein (ftsH) - syphilis spirochete
sp|O83746|FTSH_TREPA Cell division protein ftsH homolog
(609 aa)

Score: 199 bits (505), Expect: 2.22938e-49
Length: 255, Idn/Pos/Gap = 112/162/3 (43%/63%/1%)

Query: 223 ARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPP 282
           AR  A E + + T  FAD+ G+D+  EE++E V   +     +  +G K P+GVL+ GPP
Sbjct: 126 ARSAAVE-EGKVTTRFADVAGVDEAKEELMEVVDF-LKFPKKYTEIGGKIPRGVLLVGPP 183

Query: 283 GTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD 342
           GTGKTLLARA A +    F +++G+  ++MF+G GA  VRD F  A++KAP IIFIDELD
Sbjct: 184 GTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELD 243

Query: 343 AIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLD 402
           AIG  R ++  S D E ++T+ +LL ++DGFD    + +LAATNRPD+LD AL+R GR D
Sbjct: 244 AIGKSRLNAIHSND-EREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFD 302

Query: 403 RKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           R++    PD   R  ILRIH++ + + P+V  + +AR T  ++ A L  V  EA + A+R
Sbjct: 303 RQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVR 362

Query: 463 ADRKVVIHEDFIDGI 477
           + R  VI  D  + +
Sbjct: 363 SGRAQVIETDLDEAV 377

ref|ZP_00310200.1| COG0465: ATP-dependent Zn proteases [Cytophaga hutchinsonii]
(692 aa)

Score: 199 bits (505), Expect: 2.34383e-49
Length: 260, Idn/Pos/Gap = 112/154/3 (43%/59%/1%)

Query: 223 ARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPP 282
           ++   F+ D +    FAD+ GLD+  EEV E V   +     F ++G K PKG L+ GPP
Sbjct: 188 SKAALFDQDNKVKITFADVAGLDEAKEEVKEIVDF-LRFPTKFTKLGGKIPKGALLVGPP 246

Query: 283 GTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD 342
           GTGKTLLA+A A +    F  L+G+  V+MF+G GA  VRD F  AK+KAP IIFIDE+D
Sbjct: 247 GTGKTLLAKAVAGEAGVPFFSLSGSDFVEMFVGVGAARVRDLFKQAKEKAPCIIFIDEID 306

Query: 343 AIGTKRFDSDR--SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGR 400
           AIG  R         + E + T+  LL ++DGF  +  V +LAATNRPD+LD+AL+R GR
Sbjct: 307 AIGRMRGKGGNMPGSNDERENTLNSLLVEMDGFGTDSGVIILAATNRPDVLDSALLRPGR 366

Query: 401 LDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAA 460
            DR I    PD   R +I ++H + + + PDV  +++A  T  F  A +  VC EA + A
Sbjct: 367 FDRMISIDKPDIVGREQIFKVHLKPLKLGPDVDPKKIAAQTPGFAGAEIMNVCNEAALIA 426

Query: 461 LRADRKVVIHEDFIDGIAAV 480
            R D+  +  +DF D I  V
Sbjct: 427 ARRDKSEIDMQDFQDAIDRV 446

ref|YP_159756.1| cell division protein [Azoarcus sp. EbN1]
emb|CAI08855.1| Cell division protein [Azoarcus sp. EbN1]
(630 aa)

Score: 199 bits (505), Expect: 2.36347e-49
Length: 252, Idn/Pos/Gap = 115/157/2 (45%/62%/0%)

Query: 223 ARVKAFEVDERPTE-DFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGP 281
            + KA  +DE      FAD+ G D+  EEV E V   +     F+++G   PKGVLM G 
Sbjct: 140 GKSKARMLDESANSLSFADVAGCDEAKEEVSELVDF-LRDPSKFQKLGGHIPKGVLMVGS 198

Query: 282 PGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDEL 341
           PGTGKTLLA+A A + K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+
Sbjct: 199 PGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFEQAKKHAPCIIFIDEI 258

Query: 342 DAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRL 401
           DA+G +R      G+ E ++T+ +LL ++DGF+    V V+AATNRPD+LD AL+R GR 
Sbjct: 259 DAVGRQRGAGMGGGNDEREQTLNQLLVEMDGFEGQTGVIVIAATNRPDVLDPALLRPGRF 318

Query: 402 DRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAAL 461
           DR++  P PD   R +IL++H RK+ + PDV    LAR T  F+ A L  +  EA + A 
Sbjct: 319 DRQVVVPLPDIRGREQILKVHMRKVPIAPDVEPVVLARGTPGFSGADLANLVNEAALFAA 378

Query: 462 RADRKVVIHEDF 473
           R  +++V  EDF
Sbjct: 379 RGGKRLVDMEDF 390

ref|ZP_00155036.2| COG0465: ATP-dependent Zn proteases [Haemophilus influenzae R2846]
(635 aa)

Score: 198 bits (504), Expect: 2.40324e-49
Length: 236, Idn/Pos/Gap = 109/150/1 (46%/63%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +   + F+ +G K PKG+LM GPPGTGKTLLARA A + 
Sbjct: 150 FADVAGCDEAKEEVSEIVDF-LRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAGEA 208

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP +IFIDE+DA+G +R      G  
Sbjct: 209 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHD 268

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF  ND V V+AATNRPD+LD AL R GR DR++    PD   R +
Sbjct: 269 EREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQ 328

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H RK+ V  DV    LAR T  ++ A L  +  EA + A R ++++V   +F
Sbjct: 329 ILKVHMRKVPVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRMVTMLEF 384

ref|XP_420619.1| PREDICTED: similar to SPATA5 protein [Gallus gallus]
(1133 aa)

Score: 198 bits (504), Expect: 2.93606e-49
Length: 262, Idn/Pos/Gap = 107/161/4 (40%/61%/1%)

Query:  234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC  293
            P   ++DIGGL+    ++ +AV  P+ H   F R+GI+PPKGVL+YGPPG  KT++A+A 
Sbjct:  862 PKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKAL  921

Query:  294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR  353
            A ++   FL + G  L+  ++G+  R VR+ F  A+  +PSI+F DE+DA+  +R +S  
Sbjct:  922 AHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAVERGNSSG  981

Query:  354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA  413
            +G+    R + +LL ++DG +Q  DV +LAATNRPD++D AL+R GR+DR I  P PD A
Sbjct:  982 AGN-VADRVLAQLLTEMDGIEQLKDVTILAATNRPDMIDKALLRPGRIDRIIYVPLPDAA 1040

Query:  414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRAD--RKVVIHE  471
             R  I R+H R M V  ++   EL + T  ++ A + AVC EA + AL+ D   K ++  
Sbjct: 1041 TRGEIFRLHFRSMPVSEEICLAELIQRTHKYSGAEITAVCREAALLALQEDINAKCIMGR 1100

Query:  472 DFIDGIAAVQAKKKMSL-NYYA  492
             F D +  V  +   SL  +YA
Sbjct: 1101 HFRDALTVVTPRIPDSLIQFYA 1122


Score: 153 bits (386), Expect: 1.37967e-35
Length: 320, Idn/Pos/Gap = 109/162/17 (34%/50%/5%)

Query: 143 TPGAADHEDDLDDAEEDEGAAQESDANQQSPAVVVKTSTRQTVFLPIPGLVDVSELRPGD 202
           TP +A        A+ DE +++E  A+ + P        R+     +P     S  +PG 
Sbjct: 271 TPSSAVAATGQGSAQGDEASSREDAADLELP--------RKGGSEGLP-----SAAKPGA 317

Query: 203 LVGVNKDSYLILEKLPEEYDARVK-AFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTH 261
               +   Y+         +AR+  A + D  P   +  IGGL  Q++ + E V LP+  
Sbjct: 318 FSSTDTFYYISSRTRINFIEARMNIAEDSDHGPQVTYDMIGGLSSQLKTIRETVELPLKR 377

Query: 262 KHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLV 321
             LF+  GI PP+GVL+YGPPGTGKTL+A+A A +  A    + G  ++  F G+    +
Sbjct: 378 AELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRL 437

Query: 322 RDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRV 381
           R  FA A  + PSIIFIDELDA+  KR  +    ++    ++L L++ +        + V
Sbjct: 438 RQIFAEASLRRPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVV 497

Query: 382 LAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYE--ELAR 439
           L ATNRP  LDAAL R GR D++IE   P+   R  IL+   +K+  H   + E  +LA 
Sbjct: 498 LGATNRPHALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKKVP-HSLTAAEMMQLAD 556

Query: 440 STDDFNAAMLKAVCVEAGMA 459
           S   +  A L A+C EAG +
Sbjct: 557 SAHGYVGADLAALCKEAGAS 576

gb|AAL51524.1| CELL DIVISION PROTEIN FTSH [Brucella melitensis 16M]
ref|NP_539260.1| CELL DIVISION PROTEIN FTSH [Brucella melitensis 16M]
pir||AI3294 cell division protein ftsH (EC 3.4.24.-) [imported] - Brucella melitensis (strain 16M)
(651 aa)

Score: 198 bits (503), Expect: 3.32751e-49
Length: 241, Idn/Pos/Gap = 104/158/7 (43%/65%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   + +EE++E +  P      F+R+G K P+GVL+ GPPGTGKTLLAR+ A
Sbjct: 163 FQDVAGVDEAKQDLEEIVEFLRDPQK----FQRLGGKIPRGVLLVGPPGTGKTLLARSVA 218

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      
Sbjct: 219 GEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGG 278

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ + ++AATNRPD+LD AL+R GR DR++  P+PD   
Sbjct: 279 GNDEREQTLNQLLVEMDGFEANESIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDIVG 338

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL++H R + + P+V  + +AR T  F+ A L  +  EA + A R ++++V  ++F 
Sbjct: 339 REQILKVHVRNVPLAPNVDLKVVARGTPGFSGADLANLVNEAALMAARRNKRLVTMQEFE 398

Query: 475 D 475
           D
Sbjct: 399 D 399

ref|NP_228390.1| cell division protein FtsH [Thermotoga maritima MSB8]
gb|AAD35665.1| cell division protein FtsH [Thermotoga maritima MSB8]
pir||E72358 cell division protein FtsH - Thermotoga maritima (strain MSB8)
(610 aa)

Score: 198 bits (503), Expect: 3.35539e-49
Length: 250, Idn/Pos/Gap = 111/154/4 (44%/61%/1%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+GG ++ IEE+ E V   +     F R+G + PKG+L+ GPPGTGKTLLARA A + 
Sbjct: 160 FKDVGGAEEAIEELKEVVEF-LKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEA 218

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V++F+G GA  VRD FA AK  AP I+FIDE+DA+G  R      G  
Sbjct: 219 NVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRGAGLGGGHD 278

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGFD  + + V+AATNRPDILD AL+R GR D+KI    PD   R +
Sbjct: 279 EREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKK 338

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF---I 474
           IL IH+R   +  DV+ E +A+ T  F  A L+ +  EA + A R  R  +  +DF   I
Sbjct: 339 ILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAI 398

Query: 475 DGIAAVQAKK 484
           D + A  A+K
Sbjct: 399 DRVIAGPARK 408

ref|NP_946477.1| metalloprotease (cell division protein) FtsH [Rhodopseudomonas palustris CGA009]
emb|CAE26569.1| metalloprotease (cell division protein) FtsH [Rhodopseudomonas palustris CGA009]
(638 aa)

Score: 198 bits (503), Expect: 3.52764e-49
Length: 242, Idn/Pos/Gap = 104/159/7 (42%/65%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   + ++E++E +  P      F+R+G + P+GVL+ GPPGTGKTL+ARA A
Sbjct: 155 FEDVAGVDEAKQDLQEIVEFLRDPGK----FQRLGGRIPRGVLLVGPPGTGKTLIARAVA 210

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      
Sbjct: 211 GEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGG 270

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR++  P+PD   
Sbjct: 271 GNDEREQTLNQLLVEMDGFEANEGVILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVVG 330

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL++H RK+ + PD++ + +AR T  F+ A L  +  EA + A R ++++V   +F 
Sbjct: 331 REQILKVHVRKVPLAPDINLKNIARGTPGFSGADLMNLVNEAALMAARRNKRMVTQSEFE 390

Query: 475 DG 476
           D 
Sbjct: 391 DA 392

ref|YP_222356.1| FtsH, cell division protein FtsH [Brucella abortus biovar 1 str. 9-941]
gb|AAX74995.1| FtsH, cell division protein FtsH [Brucella abortus biovar 1 str. 9-941]
(644 aa)

Score: 198 bits (503), Expect: 3.83461e-49
Length: 241, Idn/Pos/Gap = 104/158/7 (43%/65%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   + +EE++E +  P      F+R+G K P+GVL+ GPPGTGKTLLAR+ A
Sbjct: 156 FQDVAGVDEAKQDLEEIVEFLRDPQK----FQRLGGKIPRGVLLVGPPGTGKTLLARSVA 211

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      
Sbjct: 212 GEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGG 271

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ + ++AATNRPD+LD AL+R GR DR++  P+PD   
Sbjct: 272 GNDEREQTLNQLLVEMDGFEANESIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDIVG 331

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL++H R + + P+V  + +AR T  F+ A L  +  EA + A R ++++V  ++F 
Sbjct: 332 REQILKVHVRNVPLAPNVDIKVVARGTPGFSGADLANLVNEAALMAARRNKRLVTMQEFE 391

Query: 475 D 475
           D
Sbjct: 392 D 392

ref|NP_104893.1| metalloprotease (cell division protein) FtsH [Mesorhizobium loti MAFF303099]
dbj|BAB50679.1| metalloprotease (cell division protein); FtsH [Mesorhizobium loti MAFF303099]
(642 aa)

Score: 197 bits (502), Expect: 4.09931e-49
Length: 239, Idn/Pos/Gap = 102/156/1 (42%/65%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  E+ +E +V  +     F+R+G K P+GVL+ GPPGTGKTLLAR+ A + 
Sbjct: 156 FQDVAGVDEAKED-LEEIVEFLRDPQKFQRLGGKIPRGVLLVGPPGTGKTLLARSVAGEA 214

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      G+ 
Sbjct: 215 NVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKNAPCIIFIDEIDAVGRHRGAGLGGGND 274

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ + ++AATNRPD+LD AL+R GR DR++  P+PD   R +
Sbjct: 275 EREQTLNQLLVEMDGFESNESIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDIVGREK 334

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDG 476
           IL++H R + + P+V  + +AR T  F+ A L  +  E+ + A R ++++V   +F D 
Sbjct: 335 ILKVHVRNVPLAPNVDLKVVARGTPGFSGADLMNLVNESALMAARRNKRLVTMAEFEDA 393

gb|AAR37490.1| cell division protein FtsH [uncultured bacterium 106]
(601 aa)

Score: 197 bits (502), Expect: 4.13365e-49
Length: 243, Idn/Pos/Gap = 109/154/5 (44%/63%/2%)

Query: 235 TED----FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLA 290
           TED    F D+ G+D+  EE +E +V  +     FER+G + P+GVL+ G PGTGKTLLA
Sbjct: 145 TEDNPIKFEDVQGIDESREE-LEEIVDFLKDPGKFERLGGEIPRGVLLMGEPGTGKTLLA 203

Query: 291 RACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFD 350
           +A A +    F  ++G+  V+MF+G GA  VRD FA  KK AP IIFIDE+DA+G  R  
Sbjct: 204 KAIAGEAAVPFFSISGSDFVEMFVGVGASRVRDMFAQGKKHAPCIIFIDEIDAVGRSRGA 263

Query: 351 SDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHP 410
               G+ E ++T+ +LL ++DGF+ N+ + V+AATNRPD+LD AL+R GR DR +  P P
Sbjct: 264 GLGGGNDEREQTLNQLLVEMDGFEVNEGIIVVAATNRPDVLDHALLRPGRFDRHVVVPSP 323

Query: 411 DEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIH 470
           D   R  IL+ HS+K+ +   VS  ++AR T  F  A L  +  EA + A R D++ V +
Sbjct: 324 DIKGRENILKTHSKKIELDKKVSLNKIARGTPGFTGADLANLVNEAALWAARQDKETVDN 383

Query: 471 EDF 473
           +DF
Sbjct: 384 DDF 386

gb|AAP13472.1| AAA family ATPase [Sulfolobus acidocaldarius]
(773 aa)

Score: 197 bits (502), Expect: 4.16829e-49
Length: 282, Idn/Pos/Gap = 117/168/15 (41%/59%/5%)

Query: 184 TVFLPIPGLV---DVSELRPGDLVGVNKDSYLILEKLPEEYDARVKAFEVDERPTEDFAD 240
           TV +P+ G      V ++RP  +V V+ ++ + + + P          E    P   + D
Sbjct: 147 TVLIPVLGQAIPFTVVQVRPQGIVIVSDETSITISEKP---------VEQTRYPRVTYED 197

Query: 241 IGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKAT 300
           IGG+ + I+++ E V LP+ H  LF+R+GI+PPKG+L+YGPPG GKTLLA+A A +T A 
Sbjct: 198 IGGMKEIIQKIRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAVANETDAY 257

Query: 301 FLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQ 360
           F  + G  ++  F G+  + +R+ F  AKK AP+IIFIDE+DAI  KR   D       +
Sbjct: 258 FTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDAIAPKR---DEVIGEVER 314

Query: 361 RTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILR 420
           R + +LL  +DG +   +V V+AATNRP+ +D AL R GR DR+IE P PD+  R  IL+
Sbjct: 315 RVVAQLLTLMDGLENRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQGRLEILQ 374

Query: 421 IHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           IH+R M +  DV   +LA  T  +  A L A+  EA M ALR
Sbjct: 375 IHTRNMPLSKDVDLHKLAEMTHGYTGADLSALVREAAMNALR 416


Score: 188 bits (478), Expect: 2.65863e-46
Length: 260, Idn/Pos/Gap = 105/166/12 (40%/63%/4%)

Query: 213 ILEKLPEEYDARVKAFE----------VDERPTEDFADIGGLDKQIEEVIEAVVLPMTHK 262
           ILEK+    D  +KAF+            E P   + DIGGL++  EE+ E V  P+ ++
Sbjct: 433 ILEKMEVRMDDFLKAFKDIVPSGLREIYIEVPEVHWFDIGGLEEVKEELREVVEYPLKYR 492

Query: 263 HLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVR 322
            ++E + I+PPKG+L++GPPGTGKT+LA+A A ++ A F+ + G  ++  ++G+  + +R
Sbjct: 493 EVYENMSIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIR 552

Query: 323 DAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVL 382
           + F  A++ AP++IF DE+D+I   R  S  SG   T+R + +LL ++DG ++ ++V V+
Sbjct: 553 EIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG--VTERIVNQLLAEMDGIEKLENVVVI 610

Query: 383 AATNRPDILDAALMRSGRLDRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTD 442
           AATNRPDILD AL+R GR DR I  P PD+ AR  IL++H++ + +  DVS E++A   +
Sbjct: 611 AATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAE 670

Query: 443 DFNAAMLKAVCVEAGMAALR 462
            +  A L AV  EA + A+R
Sbjct: 671 GYTGADLAAVVREAALRAIR 690

ref|NP_245375.1| FtsH [Pasteurella multocida subsp. multocida str. Pm70]
gb|AAK02522.1| FtsH [Pasteurella multocida subsp. multocida str. Pm70]
(639 aa)

Score: 197 bits (502), Expect: 4.34586e-49
Length: 242, Idn/Pos/Gap = 107/154/1 (44%/63%/0%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E+    FAD+ G D+  EEV E V   +     F+++G K PKG+LM GPPGTGKTLLA+
Sbjct: 143 EQIKTTFADVAGCDEAKEEVGEIVDF-LRDPGKFQKLGGKIPKGILMVGPPGTGKTLLAK 201

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A + K  F  ++G+  V+MF+G GA  VRD F  AKK AP +IFIDE+DA+G +R   
Sbjct: 202 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAG 261

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
              G  E ++T+ ++L ++DGF+ N+ V V+AATNRPD+LD AL R GR DR++    PD
Sbjct: 262 LGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPD 321

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHE 471
              R +IL++H R++ + PDV    LAR T  ++ A L  +  EA + A R ++++V   
Sbjct: 322 VRGREQILKVHMRRVPIAPDVDAMTLARGTPGYSGADLANLVNEAALFAARTNKRLVTML 381

Query: 472 DF 473
           +F
Sbjct: 382 EF 383

emb|CAB49317.1| Cdc48 cell division control protein 48, AAA family [Pyrococcus abyssi GE5]
ref|NP_126086.1| cell division control protein 48, aaa family (cdc48-1) [Pyrococcus abyssi GE5]
pir||F75154 cell division control protein 48, aaa family (cdc48-1) PAB2086 - Pyrococcus abyssi (strain Orsay)
(795 aa)

Score: 197 bits (502), Expect: 4.64585e-49
Length: 231, Idn/Pos/Gap = 106/152/3 (45%/65%/1%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   + DIGGL+   +E+ EAV  P+ +   F+  GI PPKG+L+YGPPGTGKTLLA+
Sbjct: 509 EVPNVHWDDIGGLEDVKQELREAVEWPLKYPEAFKAYGITPPKGILLYGPPGTGKTLLAK 568

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A +++A F+ + G  ++  ++G+  + +R+ F  A++ AP++IFIDE+DAI  +R   
Sbjct: 569 AVATESQANFIAVRGPEILSKWVGESEKNIREIFRKARQAAPTVIFIDEIDAIAPRR--- 625

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
               +R T R + +LL ++DG  +N  V V+AATNRPDILD AL+R GR DR I  P PD
Sbjct: 626 GTDVNRVTDRIINQLLTEMDGIQENAGVVVIAATNRPDILDPALLRPGRFDRLILVPAPD 685

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           E AR  I ++H+R M +  DV  +ELAR T+ +  A + AVC EA M A+R
Sbjct: 686 EKARFEIFKVHTRGMPLADDVDLKELARRTEGYTGADIAAVCREAAMIAMR 736


Score: 178 bits (451), Expect: 3.65372e-43
Length: 218, Idn/Pos/Gap = 99/142/5 (45%/65%/2%)

Query: 229 EVDERPTE--DFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGK 286
           EV++R T    + DIGGL   IE++ E + LP+ H  LFE++GI+PPKGVL+YGPPGTGK
Sbjct: 170 EVEKRMTTGVTYEDIGGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGK 229

Query: 287 TLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGT 346
           TLLA+A A +  A F+ + G  ++  + G+    +R+ F  A++ AP+IIFIDE+DAI  
Sbjct: 230 TLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAP 289

Query: 347 KRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIE 406
           KR  S+ +G+ E +R + +LL  +DG      V V+ ATNRPD +D AL R GR DR+IE
Sbjct: 290 KR--SEVTGEVE-KRVVAQLLALMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDREIE 346

Query: 407 FPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDF 444
              PD   R  IL+IH+R M + PD   +++ +  +DF
Sbjct: 347 VGVPDRQGRKEILQIHTRGMPIEPDFRKDDVLKILEDF 384

dbj|BAB13085.1| cell division protein ftsh [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
pir||E84974 cell division protein ftsh [imported] - Buchnera sp. (strain APS)
(596 aa)

Score: 197 bits (502), Expect: 4.80352e-49
Length: 251, Idn/Pos/Gap = 110/158/7 (43%/62%/2%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +     F+++G K PKG+LM GPPGTGKTLLA+A A + 
Sbjct: 136 FADVAGCDEAKEEVSELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEA 194

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  ++K AP IIFIDE+DA+G +R      G  
Sbjct: 195 KVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHD 254

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGFD N+ + ++AATNRPD+LD AL+R GR DR++    PD   R +
Sbjct: 255 EREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQ 314

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDGI 477
           IL++H RK+ +  DV    +AR T  F+ A L  +  EA + A R D++VV   +F    
Sbjct: 315 ILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEF---- 370

Query: 478 AAVQAKKKMSL 488
              +AK KM +
Sbjct: 371 --ERAKDKMMM 379

ref|ZP_00173137.2| COG0465: ATP-dependent Zn proteases [Methylobacillus flagellatus KT]
(618 aa)

Score: 197 bits (501), Expect: 5.35386e-49
Length: 255, Idn/Pos/Gap = 112/159/2 (43%/62%/0%)

Query: 223 ARVKAFEVDERPTED-FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGP 281
            + KA ++DE      FAD+ G D+  EEV E V   +     F+++G + P+GVLM GP
Sbjct: 124 GKSKARQLDENSNHTTFADVAGCDEAKEEVSELVEF-LRDPTKFQKLGGRIPRGVLMVGP 182

Query: 282 PGTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDEL 341
           PGTGKTLLA+A A + K  F  ++G+  V+MF+G GA  VRD F  AKK AP I+FIDE+
Sbjct: 183 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGAARVRDMFEQAKKNAPCIVFIDEI 242

Query: 342 DAIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRL 401
           DA+G  R      G+ E ++T+ +LL ++DGF+ N  V V+AATNR D+LD AL+R GR 
Sbjct: 243 DAVGRHRGAGTGGGNDEREQTLNQLLVEMDGFEANSGVIVIAATNRADVLDKALLRPGRF 302

Query: 402 DRKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAAL 461
           DR++    PD   R +IL++H RK+ +  DV  + LAR T  F+ A L  +  EA + A 
Sbjct: 303 DRQVMVGLPDIRGREQILKVHMRKVPIAADVKADILARGTPGFSGADLANLVNEAALFAA 362

Query: 462 RADRKVVIHEDFIDG 476
           R +++ V  +DF D 
Sbjct: 363 RRNKRTVDMQDFEDA 377

ref|NP_716822.1| cell division protein FtsH [Shewanella oneidensis MR-1]
gb|AAN54267.1| cell division protein FtsH [Shewanella oneidensis MR-1]
(649 aa)

Score: 197 bits (501), Expect: 5.39872e-49
Length: 236, Idn/Pos/Gap = 108/154/1 (45%/65%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +     F+++G + P GVLM GPPGTGKTLLA+A A ++
Sbjct: 153 FADVAGCDEAKEEVKELVDY-LRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGES 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G +R      G  
Sbjct: 212 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGLGGGHD 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF+ N+ + V+AATNRPD+LD+AL+R GR DR++    PD   R +
Sbjct: 272 EREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQ 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H RK+ +  DV    +AR T  F+ A L  +  EA + A R +R+VV  E+F
Sbjct: 332 ILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNRRVVGMEEF 387

dbj|BAB80304.1| cell division protein [Clostridium perfringens str. 13]
ref|NP_561514.1| cell division protein [Clostridium perfringens str. 13]
(717 aa)

Score: 197 bits (501), Expect: 5.62871e-49
Length: 249, Idn/Pos/Gap = 112/159/4 (44%/63%/1%)

Query: 238 FADIGGLDKQIEEVIEAV-VLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQ 296
           F D+ G D+  E ++E V  L  T K++   +G K PKG L+ GPPGTGKTLLA+A A +
Sbjct: 165 FKDVAGQDEAKESLVEIVDFLHDTRKYV--EIGAKLPKGALLVGPPGTGKTLLAKAVAGE 222

Query: 297 TKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGD 356
            K  F  ++G+  V+MF+G GA  VRD F  A++KAP I+FIDE+DAIG  R D    G+
Sbjct: 223 AKVPFFSMSGSDFVEMFVGMGAARVRDLFKQAEEKAPCIVFIDEIDAIGKSR-DGAIQGN 281

Query: 357 RETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARA 416
            E ++T+ +LL ++DGFD +  V +LAATNRP++LD AL+R GR DR+I    PD   R 
Sbjct: 282 DEREQTLNQLLTEMDGFDSSKGVVILAATNRPEVLDKALLRPGRFDRRIIVDRPDLIGRE 341

Query: 417 RILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDG 476
            IL++HSR + +  DVS EE+A+ST     A L  +  EA + A++  RK VI ED  + 
Sbjct: 342 EILKVHSRDVKLSDDVSLEEIAKSTPGAVGADLANIVNEAALRAVKHGRKFVIQEDLDEA 401

Query: 477 IAAVQAKKK 485
           +  + A ++
Sbjct: 402 VEVIIAGQE 410

ref|NP_660710.1| cell division protein FtsH [Buchnera aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67921.1| cell division [Buchnera aphidicola str. Sg (Schizaphis graminum)]
sp|Q8K9G8|FTSH_BUCAP Cell division protein ftsH
(613 aa)

Score: 197 bits (501), Expect: 5.96725e-49
Length: 231, Idn/Pos/Gap = 106/149/1 (45%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +     F+++G K PKG+LM GPPGTGKTLLA+A A + 
Sbjct: 151 FADVAGCDEAKEEVSELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEA 209

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  A+K AP IIFIDE+DA+G +R      G  
Sbjct: 210 KVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHD 269

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGFD N+ V ++AATNRPD+LD AL+R GR DR++    PD   R +
Sbjct: 270 EREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQ 329

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVV 468
           IL++H RK+ +  DV    +AR T  F+ A L  +  EA + A R + +VV
Sbjct: 330 ILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVV 380

emb|CAD84439.1| hflB; ATP-dependent zinc metallopeptidase (cell division ftsh) transmembrane protein [Nitrosomonas europaea ATCC 19718]
ref|NP_840613.1| hflB; ATP-dependent zinc metallopeptidase (cell division ftsh) transmembrane protein [Nitrosomonas europaea ATCC 19718]
(643 aa)

Score: 197 bits (501), Expect: 6.16977e-49
Length: 236, Idn/Pos/Gap = 111/153/1 (47%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G ++  EEV E V   +     F+++G + P+GVLM G PGTGKTLLARA A + 
Sbjct: 154 FADVAGCEEAKEEVAELVEF-LRDPSRFQKLGGRIPRGVLMCGSPGTGKTLLARAIAGEA 212

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G +R      G+ 
Sbjct: 213 KVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRQRGAGLGGGND 272

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N  V V+AATNRPD+LD AL+R GR DR++  P PD   R +
Sbjct: 273 EREQTLNQLLVEMDGFEGNMGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQ 332

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H RK+ V PDV    LAR T   + A L  +  EA + A RA +++V  +DF
Sbjct: 333 ILQVHMRKVPVSPDVKAGILARGTPGMSGADLANLVNEAALFAARAGKRLVDMDDF 388

ref|ZP_00274000.1| COG0465: ATP-dependent Zn proteases [Ralstonia metallidurans CH34]
(633 aa)

Score: 197 bits (501), Expect: 6.37916e-49
Length: 239, Idn/Pos/Gap = 107/153/1 (44%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV+E V   +     F+++G + P+GVL+ GPPGTGKTLLARA A + 
Sbjct: 153 FADVAGCDESKEEVVELVDF-LKDPQKFQKLGGRIPRGVLLVGPPGTGKTLLARAIAGEA 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK+AP I+FIDE+DA+G  R      G+ 
Sbjct: 212 KVPFFSISGSDFVEMFVGVGAARVRDMFENAKKQAPCIVFIDEIDAVGRHRGAGMGGGND 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF+ N  V V+AATNR D+LD AL+R GR DR++    PD   R +
Sbjct: 272 EREQTLNQMLVEMDGFEANSGVIVIAATNRADVLDKALLRPGRFDRQVYVGLPDIRGREQ 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDG 476
           IL++H RK+ +  DV    +AR T  F+ A L  +  EA + A R  ++VV  +DF D 
Sbjct: 332 ILKVHMRKVPIGNDVDASIIARGTPGFSGADLANLVNEAALFAARRSKRVVDMQDFEDA 390

ref|NP_708977.1| Zn metallo-peptidase, integral membrane cell division protein [Shigella flexneri 2a str. 301]
gb|AAN44684.1| Zn metallo-peptidase, integral membrane cell division protein [Shigella flexneri 2a str. 301]
ref|NP_838687.1| Zn metallo-peptidase, integral membrane cell division protein [Shigella flexneri 2a str. 2457T]
gb|AAP18498.1| Zn metallo-peptidase, integral membrane cell division protein [Shigella flexneri 2a str. 2457T]
ref|NP_417645.1| ATP-dependent zinc-metallo protease [Escherichia coli K12]
gb|AAC76210.1| degrades sigma32, integral membrane peptidase, cell division protein; ATP-dependent zinc-metallo protease [Escherichia coli K12]
gb|AAA57979.1| CG Site No. 735 [Escherichia coli]
sp|P28691|FTSH_ECOLI Cell division protein ftsH
gb|AAA23813.1| ftsH
(644 aa)

Score: 197 bits (501), Expect: 6.54085e-49
Length: 236, Idn/Pos/Gap = 107/153/1 (45%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +     F+++G K PKGVLM GPPGTGKTLLA+A A + 
Sbjct: 151 FADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA 209

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G +R      G  
Sbjct: 210 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHD 269

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF+ N+ + V+AATNRPD+LD AL+R GR DR++    PD   R +
Sbjct: 270 EREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQ 329

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H R++ + PD+    +AR T  F+ A L  +  EA + A R +++VV   +F
Sbjct: 330 ILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF 385

gb|AAA97508.1| ATP-binding protein
(647 aa)

Score: 197 bits (501), Expect: 6.59566e-49
Length: 236, Idn/Pos/Gap = 107/153/1 (45%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +     F+++G K PKGVLM GPPGTGKTLLA+A A + 
Sbjct: 154 FADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA 212

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G +R      G  
Sbjct: 213 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHD 272

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF+ N+ + V+AATNRPD+LD AL+R GR DR++    PD   R +
Sbjct: 273 EREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQ 332

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H R++ + PD+    +AR T  F+ A L  +  EA + A R +++VV   +F
Sbjct: 333 ILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF 388

sp|Q8X9L0|FTSH_ECO57 Cell division protease ftsH
gb|AAG58312.1| degrades sigma32, integral membrane peptidase, cell division protein [Escherichia coli O157:H7 EDL933]
dbj|BAB37480.1| cell division protein HflB/FtsH protease [Escherichia coli O157:H7]
ref|NP_312084.1| FtsH [Escherichia coli O157:H7]
ref|NP_289752.1| degrades sigma32, integral membrane peptidase, cell division protein [Escherichia coli O157:H7 EDL933]
(644 aa)

Score: 197 bits (501), Expect: 6.59566e-49
Length: 236, Idn/Pos/Gap = 107/153/1 (45%/64%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           FAD+ G D+  EEV E V   +     F+++G K PKGVLM GPPGTGKTLLA+A A + 
Sbjct: 151 FADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA 209

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G +R      G  
Sbjct: 210 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHD 269

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF+ N+ + V+AATNRPD+LD AL+R GR DR++    PD   R +
Sbjct: 270 EREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQ 329

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL++H R++ + PD+    +AR T  F+ A L  +  EA + A R +++VV   +F
Sbjct: 330 ILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF 385

ref|ZP_00335710.1| COG0465: ATP-dependent Zn proteases [Thiobacillus denitrificans ATCC 25259]
(632 aa)

Score: 197 bits (500), Expect: 7.41292e-49
Length: 251, Idn/Pos/Gap = 110/158/2 (43%/62%/0%)

Query: 223 ARVKAFEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPP 282
           +R +  + +  P   FAD+ G D+  E+V E V   +     F+++G + P+GVLM GPP
Sbjct: 141 SRARLLDENANPVT-FADVAGCDEAKEDVAELVDF-LKDPSKFQKLGGRIPRGVLMVGPP 198

Query: 283 GTGKTLLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELD 342
           GTGKTLLAR+ A + K  F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+D
Sbjct: 199 GTGKTLLARSIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFEQAKKNAPCIIFIDEID 258

Query: 343 AIGTKRFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLD 402
           A+G +R      G+ E ++T+ +LL ++DGF+    V V+AATNRPD+LD AL+R GR D
Sbjct: 259 AVGRQRGAGLGGGNDEREQTLNQLLVEMDGFEATTGVIVIAATNRPDVLDPALLRPGRFD 318

Query: 403 RKIEFPHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
           R++    PD   R +IL +H RK+ V PDV  + LAR T   + A L  +  EA + A R
Sbjct: 319 RQVVVGLPDIRGREQILLVHMRKVPVAPDVRADILARGTPGMSGADLANLVNEAALFAAR 378

Query: 463 ADRKVVIHEDF 473
            ++++V  +DF
Sbjct: 379 GNKRLVDMDDF 389

ref|ZP_00269644.1| COG0465: ATP-dependent Zn proteases [Rhodospirillum rubrum]
(643 aa)

Score: 197 bits (500), Expect: 7.85877e-49
Length: 239, Idn/Pos/Gap = 107/154/7 (44%/64%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   +++EEV+E +  P      F+R+G K PKGVL+ GPPGTGKTLLARA A
Sbjct: 157 FDDVAGIDEAKQELEEVVEFLRDPQK----FQRLGGKIPKGVLLVGPPGTGKTLLARAIA 212

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F   KK AP +IFIDE+DA+G  R      
Sbjct: 213 GEANVPFFTISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGAGLGG 272

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR++   +PD   
Sbjct: 273 GNDEREQTLNQLLVEMDGFEANEGVILIAATNRPDVLDPALLRPGRFDRQVTVSNPDIMG 332

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           R +IL++H RK  + PDV  + +AR T  F+ A L  +  EA + A R  ++VV   +F
Sbjct: 333 REKILKVHMRKTPLGPDVDAKVIARGTPGFSGADLSNLVNEAALLAARKGKRVVTMAEF 391

ref|ZP_00201073.1| COG0465: ATP-dependent Zn proteases [Crocosphaera watsonii WH 8501]
(503 aa)

Score: 197 bits (500), Expect: 8.19356e-49
Length: 255, Idn/Pos/Gap = 106/155/1 (41%/60%/0%)

Query: 228 FEVDERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKT 287
           F+++ +    F D+ G+D+  EE+ E V   +     F  VG + PKGVL+ GPPGTGKT
Sbjct: 162 FQMEAKTDIMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGARIPKGVLLVGPPGTGKT 220

Query: 288 LLARACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTK 347
           LLA+A A +    F  ++G+  V+MF+G GA  VRD F  AK+ AP +IFIDE+DA+G +
Sbjct: 221 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQ 280

Query: 348 RFDSDRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEF 407
           R      G+ E ++T+ +LL ++DGF+ N  + ++AATNRPD+LD+ALMR GR DR++  
Sbjct: 281 RGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVIV 340

Query: 408 PHPDEAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKV 467
             PD   R  IL +H+R   + PDVS E +AR T  F+ A L  +  EA +   R  ++ 
Sbjct: 341 DAPDFKGRIEILEVHARNKKLAPDVSIETIARRTPGFSGADLANLLNEAAILTARRRKEA 400

Query: 468 VIHEDFIDGIAAVQA 482
           V   +  D +  V A
Sbjct: 401 VTLLEIDDAVDRVVA 415

ref|NP_966965.1| cell division protein FtsH [Wolbachia endosymbiont of Drosophila melanogaster]
gb|AAS14899.1| cell division protein FtsH [Wolbachia endosymbiont of Drosophila melanogaster]
(613 aa)

Score: 197 bits (500), Expect: 8.54262e-49
Length: 236, Idn/Pos/Gap = 103/151/1 (43%/63%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G+D+  EE++E V   +  +  F+ +G K PKG L+ G PGTGKTLLARA A + 
Sbjct: 153 FDDVAGIDEAKEELVEIVDF-LKQRQKFQILGGKIPKGCLLIGSPGTGKTLLARAIAGEA 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
              F  ++G+  V+MF+G GA  VRD F   KK AP IIFIDE+DA+G  R       + 
Sbjct: 212 NVPFFSISGSDFVEMFVGVGASRVRDMFDQGKKNAPCIIFIDEIDAVGRHRGIGLGGSND 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR+I    PD   R +
Sbjct: 272 EREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDPALLRPGRFDRQITISLPDINGREK 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           IL  H +K+++ PDV+ + +AR T  F+ A L  +  E+ + A R ++K+V  +DF
Sbjct: 332 ILNTHIKKISIAPDVNVKTVARGTPGFSGADLANLVNESALIAARRNKKIVTMDDF 387

ref|NP_148637.1| transitional endoplasmic reticulum ATPase [Aeropyrum pernix K1]
dbj|BAA81490.1| 699aa long hypothetical transitional endoplasmic reticulum ATPase [Aeropyrum pernix K1]
pir||B72479 probable transitional endoplasmic reticulum ATPase APE2474 - Aeropyrum pernix (strain K1)
(699 aa)

Score: 196 bits (499), Expect: 9.1323e-49
Length: 233, Idn/Pos/Gap = 105/156/2 (45%/66%/0%)

Query: 232 ERPTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLAR 291
           E P   ++DIGGL+   +E+ E V  P+ H   F R+GI+PP+GVL++GPPGTGKTLLA+
Sbjct: 416 EVPEVRWSDIGGLEDVKQELREVVEWPLKHPEAFTRMGIRPPRGVLLFGPPGTGKTLLAK 475

Query: 292 ACAAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDS 351
           A A ++ A F+ + G  ++  ++G+  R +R+ FA A++ AP+++F DE+DAI   R   
Sbjct: 476 AVATESGANFIAVRGPEILSKWVGESERAIREIFAKARQHAPAVVFFDEIDAIAPVR--G 533

Query: 352 DRSGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPD 411
              G R T+R + +LL ++DG     DV V+AATNRPD++D ALMR GRL++ I  P PD
Sbjct: 534 TDVGTRVTERIVSQLLTEIDGVSDLHDVVVIAATNRPDMVDPALMRPGRLEKMIYVPPPD 593

Query: 412 EAARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRAD 464
            ++R  ILRIH+RK+ +  DV   E+AR T+ +  A ++A+  EA +AALR D
Sbjct: 594 FSSRLEILRIHTRKVPLAEDVDLAEIARRTEGYTGADIEALVREASLAALRED 646


Score: 192 bits (487), Expect: 2.77109e-47
Length: 229, Idn/Pos/Gap = 109/148/3 (47%/64%/1%)

Query: 234 PTEDFADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARAC 293
           P   + DIGGL + IE+V E V LP+ H  +F+R+GI+PPKG+L+YGPPGTGKTLLA+A 
Sbjct: 145 PKVTYEDIGGLKEVIEKVREMVELPLRHPEIFKRLGIEPPKGILLYGPPGTGKTLLAKAV 204

Query: 294 AAQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDR 353
           A +  A F+ + G  ++  + G+  + +R+ F  AKK APSIIFIDE+DAI  KR   D 
Sbjct: 205 ANEADAYFISINGPEIMSKYYGESEQRLREIFEEAKKNAPSIIFIDEIDAIAPKR---DE 261

Query: 354 SGDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEA 413
                 +R + +LL  +DG +   +V V+AATNRP+ +D AL R GR DR+IE P PD+ 
Sbjct: 262 VVGEVERRVVAQLLALMDGLEARGNVIVIAATNRPNAIDPALRRPGRFDREIEVPLPDKH 321

Query: 414 ARARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALR 462
            R  IL+IH+R M +  D+  E+LA  T  F  A L A+  EA M ALR
Sbjct: 322 GRLEILQIHTRHMPLAEDMDLEKLAEMTKGFTGADLAALAREAAMYALR 370

ref|ZP_00196019.2| COG0465: ATP-dependent Zn proteases [Mesorhizobium sp. BNC1]
(645 aa)

Score: 196 bits (499), Expect: 1.00101e-48
Length: 242, Idn/Pos/Gap = 104/157/7 (42%/64%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   + +EE++E +  P      F+R+G K P+GVL+ GPPGTGKTLLAR+ A
Sbjct: 156 FQDVAGVDEAKQDLEEIVEFLRDPQK----FQRLGGKIPRGVLLVGPPGTGKTLLARSVA 211

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      
Sbjct: 212 GEANVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKNAPCIIFIDEIDAVGRHRGAGLGG 271

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ + ++AATNRPD+LD AL+R GR DR++  P+PD   
Sbjct: 272 GNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDIVG 331

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL++H R + + P+V  + +AR T  F+ A L  +  EA + A R ++++V   +F 
Sbjct: 332 REKILKVHVRNVPLAPNVDLKTIARGTPGFSGADLANLVNEAALMAARRNKRLVTMAEFE 391

Query: 475 DG 476
           D 
Sbjct: 392 DA 393

gb|AAN30591.1| cell division protein FtsH [Brucella suis 1330]
ref|NP_698676.1| cell division protein FtsH [Brucella suis 1330]
(644 aa)

Score: 196 bits (499), Expect: 1.00101e-48
Length: 241, Idn/Pos/Gap = 103/157/7 (42%/65%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   + +EE++E +  P      F+R+G K P+GVL+ GPPGTGKTLLAR+ A
Sbjct: 156 FQDVAGVDEAKQDLEEIVEFLRDPQK----FQRLGGKIPRGVLLVGPPGTGKTLLARSVA 211

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      
Sbjct: 212 GEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGG 271

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ + ++AATNRPD+LD AL+R GR DR++  P+PD   
Sbjct: 272 GNDEREQTLNQLLVEMDGFEANESIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDIVG 331

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFI 474
           R +IL++H R + + P+V  + +AR T  F+ A L  +  EA +   R ++++V  ++F 
Sbjct: 332 REQILKVHVRNVPLAPNVDLKVVARGTPGFSGADLANLVNEAALMTARRNKRLVTMQEFE 391

Query: 475 D 475
           D
Sbjct: 392 D 392

ref|NP_773786.1| metalloprotease [Bradyrhizobium japonicum USDA 110]
emb|CAB51029.1| metalloprotease FtsH [Bradyrhizobium japonicum]
dbj|BAC52411.1| metalloprotease [Bradyrhizobium japonicum USDA 110]
(640 aa)

Score: 196 bits (499), Expect: 1.02639e-48
Length: 239, Idn/Pos/Gap = 103/158/7 (43%/66%/2%)

Query: 238 FADIGGLD---KQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACA 294
           F D+ G+D   + ++E++E +  P      F+R+G + P+GVL+ GPPGTGKTL+ARA A
Sbjct: 155 FEDVAGVDEAKQDLQEIVEFLRDPGK----FQRLGGRIPRGVLLVGPPGTGKTLIARAVA 210

Query: 295 AQTKATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRS 354
            +    F  ++G+  V+MF+G GA  VRD F  AKK AP IIFIDE+DA+G  R      
Sbjct: 211 GEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGG 270

Query: 355 GDRETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAA 414
           G+ E ++T+ +LL ++DGF+ N+ V ++AATNRPD+LD AL+R GR DR++  P+PD   
Sbjct: 271 GNDEREQTLNQLLVEMDGFEANEGVILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVVG 330

Query: 415 RARILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDF 473
           R +IL++H RK+ + PD++ + +AR T  F+ A L  +  EA + A R ++++V   +F
Sbjct: 331 REQILKVHVRKVPLAPDINLKTIARGTPGFSGADLMNLVNEAALTAARRNKRMVTQAEF 389

ref|ZP_00168024.2| COG0465: ATP-dependent Zn proteases [Ralstonia eutropha JMP134]
(627 aa)

Score: 196 bits (499), Expect: 1.07011e-48
Length: 239, Idn/Pos/Gap = 106/152/1 (44%/63%/0%)

Query: 238 FADIGGLDKQIEEVIEAVVLPMTHKHLFERVGIKPPKGVLMYGPPGTGKTLLARACAAQT 297
           F D+ G D+  EEV+E V   +     F+++G + P+GVL+ GPPGTGKTLLARA A + 
Sbjct: 153 FQDVAGCDESKEEVVELVDF-LKDPQKFQKLGGRIPRGVLLVGPPGTGKTLLARAIAGEA 211

Query: 298 KATFLKLAGTSLVQMFIGDGARLVRDAFALAKKKAPSIIFIDELDAIGTKRFDSDRSGDR 357
           K  F  ++G+  V+MF+G GA  VRD F  AKK+AP I+FIDE+DA+G  R      G+ 
Sbjct: 212 KVPFFSISGSDFVEMFVGVGAARVRDMFENAKKQAPCIVFIDEIDAVGRHRGAGMGGGND 271

Query: 358 ETQRTMLELLNQLDGFDQNDDVRVLAATNRPDILDAALMRSGRLDRKIEFPHPDEAARAR 417
           E ++T+ ++L ++DGF+ N  V V+AATNR D+LD AL+R GR DR++    PD   R +
Sbjct: 272 EREQTLNQMLVEMDGFEANSGVIVIAATNRSDVLDKALLRPGRFDRQVYVGLPDIRGREQ 331

Query: 418 ILRIHSRKMNVHPDVSYEELARSTDDFNAAMLKAVCVEAGMAALRADRKVVIHEDFIDG 476
           IL++H RK+ +  DV    +AR T  F+ A L  +  EA + A R  ++VV  +DF D 
Sbjct: 332 ILKVHMRKVPIGNDVDASVIARGTPGFSGADLANLVNEAALFAARRSKRVVDMQDFEDA 390

Cyanidioschyzon merolae Genome Project