Cyanidioschyzon merolae Genome Project
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CMS034C (583 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)
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structure-specific recognition protein 1 [Dictyostelium discoideum] |
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Unknown (protein for IMAGE:4405213) [Xenopus laevis] |
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Ssrp1 protein [Xenopus tropicalis] |
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DUF87 [Xenopus laevis] |
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hypothetical protein [Gallus gallus] |
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structure-specific recognition protein 1 [Gallus gallus] |
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Structure specific recognition protein 1 [Danio rerio] |
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SSRP1 protein [Homo sapiens] |
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transcription factor [Vicia faba] |
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structure specific recognition protein 1 [Mus musculus] |
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Structure specific recognition protein 1 [Homo sapiens] |
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Structure-specific recognition protein 1 (SSRP1) (Recombination signal sequence recognition protein) (T160) |
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Structure specific recognition protein 1 [Rattus norvegicus] |
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structure-specific recognition protein 1 (HMG1 DNA-binding protein) [Arabidopsis thaliana] |
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early drought induced protein [Oryza sativa (indica cultivar-group)] |
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putative SSRP1 protein [Oryza sativa (japonica cultivar-group)] |
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Unknown (protein for IMAGE:7140964) [Danio rerio] |
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GA18454-PA [Drosophila pseudoobscura] |
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SD06504p [Drosophila melanogaster] |
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CG4817-PA [Drosophila melanogaster] |
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HMG1-related DNA-binding protein [Mus sp.] |
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single-stranded recognition protein |
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PREDICTED: similar to structure specific recognition protein 1; recombination signal sequence recognition protein; chromatin-specific transcription elongation factor 80 kDa subunit; high mobility group box; facilitates chromatin remodeling 80 kDa subunit; cis... [Pan troglodytes] |
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HMG protein [Catharanthus roseus] |
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putative HMG-box with DNAbinding protein [Oryza sativa (japonica cultivar-group)] |
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unnamed protein product [Tetraodon nigroviridis] |
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SPBC609.05 [Schizosaccharomyces pombe] |
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ENSANGP00000009009 [Anopheles gambiae str. PEST] |
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SSRP1 protein [Zea mays] |
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high mobility group protein [Arabidopsis thaliana] |
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high mobility group protein - Arabidopsis thaliana |
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PREDICTED: similar to structure specific recognition protein 1, partial [Bos taurus] |
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hypothetical protein FG02518.1 [Gibberella zeae PH-1] |
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unnamed protein product [Debaryomyces hansenii CBS767] |
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AER138Cp [Ashbya gossypii ATCC 10895] |
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hypothetical protein UM04416.1 [Ustilago maydis 521] |
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Hypothetical protein CBG04066 [Caenorhabditis briggsae] |
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unnamed protein product [Candida glabrata CBS138] |
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unnamed protein product [Saccharomyces cerevisiae] |
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hypothetical protein [Neurospora crassa] |
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structure-specific recognition protein 1 (SSRP1) (recombination signal sequence recognition protein) [Cryptosporidium parvum] |
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structure specific recognition protein [Cryptosporidium hominis] |
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Hypothetical protein CBG09136 [Caenorhabditis briggsae] |
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Hmg protein 4 [Caenorhabditis elegans] |
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hypothetical protein AN6687.2 [Aspergillus nidulans FGSC A4] |
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unnamed protein product [Kluyveromyces lactis NRRL Y-1140] |
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Hmg protein 3 [Caenorhabditis elegans] |
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unnamed protein product [Yarrowia lipolytica CLIB99] |
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Structure-specific recognition protein 1 (SSRP1) (Recombination signal sequence recognition protein) (T160) |
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structure specific recognition protein, putative [Plasmodium falciparum 3D7] |
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hypothetical protein CNBL3050 [Cryptococcus neoformans var. neoformans B-3501A] |
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putative structure specific recognition protein [Plasmodium yoelii yoelii] |
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structure specific recognition protein, putative [Plasmodium berghei] |
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hypothetical protein PB300791.00.0 [Plasmodium berghei] |
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structure-specific recognition protein 1 [Bos taurus] |
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structure specific recognition protein, putative [Plasmodium chabaudi] |
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structure specific recognition protein, putative [Entamoeba histolytica HM-1:IMSS] |
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STRUCTURE-SPECIFIC RECOGNITION PROTEIN [Encephalitozoon cuniculi GB-M1] |
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SSRP1-like protein [Zygosaccharomyces rouxii] |
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hypothetical protein PC300891.00.0 [Plasmodium chabaudi] |
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hypothetical protein MG10128.4 [Magnaporthe grisea 70-15] |
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structure-specific recognition protein 1 [Plasmodium yoelii yoelii] |
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RNA polymerase beta' subunit-2 [Huperzia lucidula] |
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hypothetical protein PF10_0319 [Plasmodium falciparum 3D7] |
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Hypothetical protein F55F10.1 [Caenorhabditis elegans] |
gb|EAL62292.1| structure-specific recognition protein 1 [Dictyostelium discoideum] (527 aa) Score: 284 bits (727), Expect: 5.2367e-75 Length: 466, Idn/Pos/Gap = 159/258/57 (34%/55%/12%) Query: 20 GSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFR-GARGDQLRCTRKDGSTVNFEGFR 78 G L+ + + W N + T+S + D+ W R R QL + K G+TV F+GF+ Sbjct: 25 GILKFTTNNITWKSENGKIETVSSS--DIKRANWARVTPRIFQLILSIKGGATVKFDGFK 82 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSG-SETAFELPISD 137 D + +Y+ + + + E G N+G+V++ G + F + + FE PIS+ Sbjct: 83 EQDYEVVRKYLSDQYN-VSPLEIIELSSKGCNWGEVKVNGPMIQFTTDHGKVGFEFPISE 141 Query: 138 ISQVV--RSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEEDA---------------- 179 +SQ V + +NEL LEFH D DE +VEMRF P Sbjct: 142 VSQSVIGANNKNELTLEFHHDKAMDDDDETMVEMRFFTPIRPSKEGEEGGKEKKVGEDGE 201 Query: 180 --------------IALHAELSARVGSASFM----GESLVFFEELPFIVPRGRYDLELFP 221 I+ + + + S M G+SLV F + F+ PRGR D+E++P Sbjct: 202 EDEEDEEDAEKEEEISALEQFQQTIMNKSDMVSNVGKSLVVFSAIQFLTPRGRIDIEMYP 261 Query: 222 TYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRD 281 T+L +HGK+ DYK+ Y+++ R+F +PD+ H+ +ISLDPPIRQG T Y HLV+Q + + Sbjct: 262 TFLKLHGKTHDYKVPYESISRLFQFFRPDQKHIFFIISLDPPIRQGQTKYAHLVIQFQAE 321 Query: 282 DDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAH 341 ++ I + LN+ +ELQ+++ D+L P ++G ++ K+L+ L K + P NF + GA+ Sbjct: 322 EN-IHLELNLT-DELQQKFKDQLSPIMNGNANALICKILKALTGKKITIPGNFQSDSGAN 379 Query: 342 ALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEM-------DRRFDLQV 394 +++ +L AN+GYLYPLE CFFFV+KPPTY+++ED+ +EF R +R FDL + Sbjct: 380 SIKCSLKANEGYLYPLERCFFFVHKPPTYIKFEDISNIEFARYGAPSVRGGSNRTFDLSI 439 Query: 395 VMLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGIPPALLRGATTG 440 + N +++ F N++R E+ +L+ FL+ K++ ++L TTG Sbjct: 440 NLKNSTSIQFVNIQREEYPSLFNFLKEKKL-------SILNPVTTG 478
gb|AAH82613.1| Unknown (protein for IMAGE:4405213) [Xenopus laevis] (458 aa) Score: 280 bits (717), Expect: 6.78448e-74 Length: 420, Idn/Pos/Gap = 156/250/20 (37%/59%/4%) Query: 16 SLGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNF 74 S+ G LRLS+AGL++ G + IS A D+A + W R A G ++ G + Sbjct: 17 SMNDGRLRLSRAGLMYKNNKTGKVENISAA--DIAEVVWRRVALGHGIKLLTNGGHVYKY 74 Query: 75 EGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELP 134 +GFR + L +Y K ++ + + V GWN+G VR G+ + F G + AFELP Sbjct: 75 DGFRETEYDKLFDYFKSHFSVE--LVEKDLCVKGWNWGSVRFGGQLLSFDIGDQPAFELP 132 Query: 135 ISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEED-------AIALHAELS 187 +S++SQ +G+NE+ LEFH +D ++ L+E+RF P +D A A + Sbjct: 133 LSNVSQCT-TGKNEVTLEFHQND---DSEVSLMEIRFYVPPTQDDGGDSVEAFAQNVLSK 188 Query: 188 ARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLP 247 A V A+ G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP Sbjct: 189 ADVIQAT--GDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLP 246 Query: 248 KPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPK 307 D+ + VISLDPPI+QG T Y L+L +D+D + + LNM EE+++R+ KL Sbjct: 247 HKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-MTLTLNMSEEEVERRFEGKLKKS 305 Query: 308 ISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKP 367 +SG L+++V++V++ LV++ + P NF+ G+ + + A+ G LYPLE F +V+KP Sbjct: 306 MSGCLYEMVSRVMKALVNRKITVPGNFLGHSGSQCITCSYKASSGLLYPLERGFIYVHKP 365 Query: 368 PTYLRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 P ++R++++ V F R R FD ++ GS F+++ER E+ L+ F+ +K++ + Sbjct: 366 PVHIRFDEITCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVNAKKLSI 425
gb|AAH74541.1| Ssrp1 protein [Xenopus tropicalis] (629 aa) Score: 278 bits (710), Expect: 3.97859e-73 Length: 495, Idn/Pos/Gap = 175/276/42 (35%/55%/8%) Query: 16 SLGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNF 74 S+ G LRLS+AGL++ G + IS A D+A + W R A G ++ G + Sbjct: 17 SMNDGRLRLSRAGLMYKNNKTGKVENISAA--DIAEVVWRRVALGHGIKLLTNGGHVYKY 74 Query: 75 EGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELP 134 +GFR + L +Y K + + + V GWN+G VR G+ + F G + AFELP Sbjct: 75 DGFRDTEYDKLFDYFKSHFRVE--LVEKDLCVKGWNWGSVRFGGQLLSFDIGDQPAFELP 132 Query: 135 ISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEED-------AIALHAELS 187 +S++SQ +G+NE+ LEFH +D ++ L+E+RF P +D A A + Sbjct: 133 LSNVSQCT-TGKNEVTLEFHQND---DSEVSLMEIRFYVPPTQDDGGDPVEAFAQNVLSK 188 Query: 188 ARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLP 247 A V A+ G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP Sbjct: 189 ADVIQAT--GDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLP 246 Query: 248 KPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPK 307 D+ + VISLDPPI+QG T Y L+L +D+D + + LNM EE+++R+ KL Sbjct: 247 HKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-MTLTLNMSEEEVERRFEGKLKKN 305 Query: 308 ISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKP 367 +SG L+++V++V++ LV++ + P NF G+ + + A+ G LYPLE F +V+KP Sbjct: 306 MSGCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKASSGLLYPLERGFIYVHKP 365 Query: 368 PTYLRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 P ++R+++V+ V F R R FD ++ GS F+++ER E+ L+ F+ +K Sbjct: 366 PVHIRFDEVNCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVNAK---- 421 Query: 427 VGIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK-RD 485 K S++ ++ M A ++ A + ED +A + K +GK R+ Sbjct: 422 --------------KLSIKNRGLKEGMKPAYDDYADSD---EDQHDAYLERMKEEGKIRE 464 Query: 486 PQTFDDEDDEEDEDF 500 D+ DE DE F Sbjct: 465 NADSDESGDETDESF 479
dbj|BAA76333.1| DUF87 [Xenopus laevis] (693 aa) Score: 275 bits (704), Expect: 2.07592e-72 Length: 495, Idn/Pos/Gap = 174/277/42 (35%/55%/8%) Query: 16 SLGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNF 74 S+ G LRLS+AGL++ G + IS A D+A + W R A G ++ G + Sbjct: 17 SMNDGRLRLSRAGLMYKNNKTGKVENISAA--DIAEVVWRRVALGHGIKLLTNGGHVYKY 74 Query: 75 EGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELP 134 +GFR + L +Y K ++ + + V GWN+G VR G+ + F G + AFELP Sbjct: 75 DGFRETEYDKLFDYFKSHFSVE--LVEKDLCVKGWNWGSVRFGGQLLSFDIGDQPAFELP 132 Query: 135 ISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEED-------AIALHAELS 187 +S++SQ +G+NE+ LEFH +D ++ L+E+RF P +D A A + Sbjct: 133 LSNVSQCT-TGKNEVTLEFHQND---DSEVSLMEIRFYVPPTQDDGGDSVEAFAQNVLSK 188 Query: 188 ARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLP 247 A V A+ G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP Sbjct: 189 ADVIQAT--GDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLP 246 Query: 248 KPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPK 307 D+ + VISLDPPI+QG T Y L+L +D+D + + LNM EE+++R+ KL Sbjct: 247 HKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-MTLTLNMSEEEVERRFEGKLKKS 305 Query: 308 ISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKP 367 +SG L+++V++V++ LV++ + P NF+ G+ + + A+ G LYPLE F +V+KP Sbjct: 306 MSGCLYEMVSRVMKALVNRKITVPGNFLGHSGSQCITCSYKASSGLLYPLERGFIYVHKP 365 Query: 368 PTYLRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 P ++R++++ V F R R FD ++ GS F+++ER E+ L+ F+ +K Sbjct: 366 PVHIRFDEITCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVNAK---- 421 Query: 427 VGIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK-RD 485 K S++ ++ M A ++ A + ED +A + K +GK R+ Sbjct: 422 --------------KLSIKNRGLKEGMKPAYDDYADSD---EDQHDAYLERMKEEGKIRE 464 Query: 486 PQTFDDEDDEEDEDF 500 D+ DE DE F Sbjct: 465 NADSDESGDETDESF 479
emb|CAG31300.1| hypothetical protein [Gallus gallus] (706 aa) Score: 273 bits (698), Expect: 9.88171e-72 Length: 493, Idn/Pos/Gap = 165/275/22 (33%/55%/4%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S+ G LRLS+ G+++ G ++ +LA W R A G L+ K+G ++ Sbjct: 17 SMNDGRLRLSRQGVIFKNSKTGKVD-NIQASELAEGVWRRVALGHGLKLLTKNGHVYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L ++ K + + + V GWN+G VR G+ + F G + FE+P+ Sbjct: 76 GFRESEFDKLSDFFKAHYRLE--LAEKDLCVKGWNWGTVRFGGQLLSFDIGEQPVFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSARV 190 S++SQ +G+NE+ LEFH +D A + L+E+RF P T+ED + A + ++ Sbjct: 134 SNVSQCT-TGKNEVTLEFHQNDDA---EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP D Sbjct: 190 DVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + + VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +SG Sbjct: 250 QRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP + Sbjct: 309 SLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVH 368 Query: 371 LRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGI 429 +R++++ FV F R R FD ++ G+ F+++ER E+ L+ F+ +K++ + Sbjct: 369 IRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKN- 427 Query: 430 PPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGKRDPQTF 489 RG G ++ R + +G+ EE + + G+ ++F Sbjct: 428 -----RGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDESF 482 Query: 490 D--DEDDEEDEDF 500 + +EDD+ E+F Sbjct: 483 NPGEEDDDVAEEF 495
ref|NP_001005796.1| structure-specific recognition protein 1 [Gallus gallus] (706 aa) Score: 273 bits (698), Expect: 9.88171e-72 Length: 493, Idn/Pos/Gap = 165/275/22 (33%/55%/4%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S+ G LRLS+ G+++ G ++ +LA W R A G L+ K+G ++ Sbjct: 17 SMNDGRLRLSRQGVIFKNSKTGKVD-NIQASELAEGVWRRVALGHGLKLLTKNGHVYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L ++ K + + + V GWN+G VR G+ + F G + FE+P+ Sbjct: 76 GFRESEFDKLSDFFKAHYRLE--LAEKDLCVKGWNWGTVRFGGQLLSFDIGEQPVFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSARV 190 S++SQ +G+NE+ LEFH +D A + L+E+RF P T+ED + A + ++ Sbjct: 134 SNVSQCT-TGKNEVTLEFHQNDDA---EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP D Sbjct: 190 DVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + + VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +SG Sbjct: 250 QRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP + Sbjct: 309 SLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVH 368 Query: 371 LRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGI 429 +R++++ FV F R R FD ++ G+ F+++ER E+ L+ F+ +K++ + Sbjct: 369 IRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKN- 427 Query: 430 PPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGKRDPQTF 489 RG G ++ R + +G+ EE + + G+ ++F Sbjct: 428 -----RGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDESF 482 Query: 490 D--DEDDEEDEDF 500 + +EDD+ E+F Sbjct: 483 NPGEEDDDVAEEF 495
gb|AAH56311.1| Structure specific recognition protein 1 [Danio rerio] ref|NP_997967.1| structure specific recognition protein 1 [Danio rerio] (518 aa) Score: 273 bits (698), Expect: 1.14831e-71 Length: 521, Idn/Pos/Gap = 174/271/34 (33%/52%/6%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S G LR SK +++ G S+ DL+ +W R G L+ G ++ Sbjct: 17 SWNDGRLRFSKQTVVYKSHKTGKVD-SIPAPDLSEAQWRRVCLGHGLKLATSTGHIYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GF+ D + + K + + + V GWN+G + G + F FE+P+ Sbjct: 76 GFKETDYEKISAFFKANYKVE--LEEKDMCVKGWNWGTAKFAGSLLSFDVSDSPVFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP--TEEDAI----ALHAELSAR 189 S +SQ +G+NE+ +EFH +D A + L+E+RF P T +D A + ++ Sbjct: 134 SSVSQCA-TGKNEVTVEFHQNDDA---EVSLMEVRFYVPPNTGDDGSDPVEAFAQNILSK 189 Query: 190 VGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKP 249 G+++ F+EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP Sbjct: 190 ADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHK 249 Query: 250 DEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKIS 309 D+ + VISLDPPI+QG T Y L+L +D+D I +ALNM +E++KRY KL +S Sbjct: 250 DQRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLALNMSEDEVEKRYEGKLSKNMS 308 Query: 310 GELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPT 369 G L+++V++V++ LV++ + P NF G+ + A A+ G LYPLE F +V+KPP Sbjct: 309 GPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERVFIYVHKPPV 368 Query: 370 YLRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQ--VRM 426 +LR+E++ V F R R FD ++ + F+N+ER E+ L+ F+ +K+ ++ Sbjct: 369 HLRFEEISCVNFARGTTTTRSFDFEIETKQNNQFTFSNIEREEYGKLFDFVNAKKLTIKN 428 Query: 427 VGIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGKRDP 486 G ++GA S + E R E DG DD E D ++ G Sbjct: 429 RGFKEG-MKGAEDYSDSDEDQHDAYLERMKEEGKIREEGDGSDDSEGDSDESFNPG---- 483 Query: 487 QTFDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDDDDDDD 527 +EDD DV +E D S SD+ DD D +D+ Sbjct: 484 ----EEDD--------DVPEEYDSNASVSDSEGDDGDSEDE 512
gb|AAH91486.1| SSRP1 protein [Homo sapiens] (633 aa) Score: 270 bits (691), Expect: 6.51292e-71 Length: 495, Idn/Pos/Gap = 167/273/39 (33%/55%/7%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S+ G LRLS+ G+++ G ++ +L W R A G L+ K+G ++ Sbjct: 17 SMNDGRLRLSRQGIIFKNSKTGKVD-NIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L ++ K + + + V GWN+G V+ G+ + F G + FE+P+ Sbjct: 76 GFRESEFEKLSDFFKTHYRLE--LMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSARV 190 S++SQ +G+NE+ LEFH +D A + L+E+RF P T+ED + A + ++ Sbjct: 134 SNVSQCT-TGKNEVTLEFHQNDDA---EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP D Sbjct: 190 DVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + + VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +SG Sbjct: 250 QRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP + Sbjct: 309 SLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVH 368 Query: 371 LRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGI 429 +R++++ FV F R R FD ++ G+ F+++ER E+ L+ F+ +K Sbjct: 369 IRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAK------- 421 Query: 430 PPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK-RDPQT 488 K +++ ++ M + +E A + ED +A + K +GK R+ Sbjct: 422 -----------KLNIKNRGLKEGMNPSYDEYADSD---EDQHDAYLERMKEEGKIREENA 467 Query: 489 FDDEDD---EEDEDF 500 D DD E DE F Sbjct: 468 NDSSDDSGEETDESF 482
emb|CAA66480.1| transcription factor [Vicia faba] pir||T12113 transcription factor - fava bean (642 aa) Score: 270 bits (689), Expect: 1.15826e-70 Length: 519, Idn/Pos/Gap = 173/274/47 (33%/52%/9%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFR 78 PG +++ G+LW R G TI V + D+ + W + + +QL KDG F GFR Sbjct: 20 PGQIKIYSGGILWK-RQGGGKTIDVDKTDIMGVTWMKVPKTNQLGVQIKDGLLYKFTGFR 78 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPISDI 138 D +L + + + T V + V G N+G+V + G + F+ GS+ AFE+ ++D+ Sbjct: 79 DQDVVSLTNFFQNTFGIT--VEEKQLSVTGRNWGEVDLNGNMLAFMVGSKQAFEVSLADV 136 Query: 139 SQVVRSGRNELALEFHLDDTAGKTD-ECLVEMRFQAPTEEDA-IALHAELSARVGSASFM 196 SQ G+N++ LEFH+DDT G + + L+EM F P+ + SA+V M Sbjct: 137 SQTNLQGKNDVILEFHVDDTTGANEKDSLMEMSFHIPSSNTQFVGDENRPSAQVFRDKIM 196 Query: 197 G---------ESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLP 247 +++V F+ + + PRGRY +EL ++L + G++ D+KI Y +V R+FLLP Sbjct: 197 SMADVGVGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLP 256 Query: 248 KPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPK 307 K ++ H ++ISLDPPIR+G T YPH+V+Q D ++ L + + +Y DKL Sbjct: 257 KSNQPHTFVIISLDPPIRKGQTLYPHIVMQF-ETDTVVDSELAISEDLYNSKYKDKLELS 315 Query: 308 ISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKP 367 G + +V T VLR L + P NF + Q +A++++L A DG LYPLE FFF+ KP Sbjct: 316 YKGLIHEVFTTVLRGLSGGKVTKPGNFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKP 375 Query: 368 PTYLRYEDVDFVEFKRLEMD----RRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQ 423 PT + +E++D+VEF+R FDL + + + LF N++R+E+ LY F+ SK Sbjct: 376 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKG 435 Query: 424 VRMVGIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK 483 ++++ I A A +A +A + + +DD+ D + Sbjct: 436 LKIMNI----------------ADAQQAVGGVA------KVLENDDDDAVDPHLERIRN- 472 Query: 484 RDPQTFDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDD 522 + DE DEED DF D +D G+P+D A D Sbjct: 473 ---EAGGDESDEEDSDFVIDKDD--GGSPTDDSGADVSD 506
ref|NP_892035.1| structure specific recognition protein 1 [Mus musculus] gb|AAH42502.1| Structure specific recognition protein 1 [Mus musculus] (711 aa) Score: 268 bits (684), Expect: 4.8649e-70 Length: 483, Idn/Pos/Gap = 164/268/27 (33%/55%/5%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S+ G LRLS+ G+++ G ++ +L W R A G L+ K+G ++ Sbjct: 17 SMNDGRLRLSRQGIIFKNSKTGKVD-NIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L ++ K + + + V GWN+G V+ G+ + F G + FE+P+ Sbjct: 76 GFRESEFEKLSDFFKTHYRLE--LMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSARV 190 S++SQ +G+NE+ LEFH +D A + L+E+RF P T+ED + A + ++ Sbjct: 134 SNVSQCT-TGKNEVTLEFHQNDDA---EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP D Sbjct: 190 DVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + + VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +SG Sbjct: 250 QRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP + Sbjct: 309 SLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVH 368 Query: 371 LRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMV-- 427 +R++++ FV F R R FD ++ G+ F+++ER E+ L+ F+ +K++ + Sbjct: 369 IRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNR 428 Query: 428 ----GIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK 483 GI P A + + A R + EE RE + D +DD + D Sbjct: 429 GLKEGINPGYDDYADSDEDQHDAYLERMK-----EEGKIREENAND--SSDDSGEETDES 481 Query: 484 RDP 486 +P Sbjct: 482 FNP 484
gb|AAH05116.1| Structure specific recognition protein 1 [Homo sapiens] sp|Q08945|SSRP_HUMAN Structure-specific recognition protein 1 (SSRP1) (Recombination signal sequence recognition protein) (T160) (Chromatin-specific transcription elongation factor 80 kDa subunit) (FACT 80 kDa subunit) gb|AAA58660.1| high mobility group box ref|NP_003137.1| structure specific recognition protein 1 [Homo sapiens] (709 aa) Score: 267 bits (683), Expect: 5.33254e-70 Length: 495, Idn/Pos/Gap = 167/273/39 (33%/55%/7%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S+ G LRLS+ G+++ G ++ +L W R A G L+ K+G ++ Sbjct: 17 SMNDGRLRLSRQGIIFKNSKTGKVD-NIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L ++ K + + + V GWN+G V+ G+ + F G + FE+P+ Sbjct: 76 GFRESEFEKLSDFFKTHYRLE--LMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSARV 190 S++SQ +G+NE+ LEFH +D A + L+E+RF P T+ED + A + ++ Sbjct: 134 SNVSQCT-TGKNEVTLEFHQNDDA---EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP D Sbjct: 190 DVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + + VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +SG Sbjct: 250 QRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP + Sbjct: 309 SLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVH 368 Query: 371 LRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGI 429 +R++++ FV F R R FD ++ G+ F+++ER E+ L+ F+ +K Sbjct: 369 IRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAK------- 421 Query: 430 PPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK-RDPQT 488 K +++ ++ M + +E A + ED +A + K +GK R+ Sbjct: 422 -----------KLNIKNRGLKEGMNPSYDEYADSD---EDQHDAYLERMKEEGKIREENA 467 Query: 489 FDDEDD---EEDEDF 500 D DD E DE F Sbjct: 468 NDSSDDSGEETDESF 482
sp|Q04678|SSRP_CHICK Structure-specific recognition protein 1 (SSRP1) (Recombination signal sequence recognition protein) (T160) gb|AAA48685.1| HMG box (bp. 1499..1757) (669 aa) Score: 265 bits (678), Expect: 1.99283e-69 Length: 486, Idn/Pos/Gap = 164/267/38 (33%/54%/7%) Query: 42 SVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPR 101 ++ +LA W R A G L+ K+G ++GFR ++ L ++ K + + Sbjct: 4 NIQASELAEGVWRRVALGHGLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLE--LAE 61 Query: 102 GEQGVVGWNFGQVRIEGESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGK 161 + V GWN+G VR G+ + F G + FE+P+S++SQ +G+NE+ LEFH +D A Sbjct: 62 KDLCVKGWNWGTVRFGGQLLSFDIGEQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDA-- 118 Query: 162 TDECLVEMRFQAP-TEEDAI----ALHAELSARVGSASFMGESLVFFEELPFIVPRGRYD 216 + L+E+RF P T+ED + A + ++ G+++ F EL + PRGRYD Sbjct: 119 -EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYD 177 Query: 217 LELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVL 276 + ++PT+L +HGK+FDYKI Y TV R+FLLP D+ + VISLDPPI+QG T Y L+L Sbjct: 178 IRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLIL 237 Query: 277 QLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVT 336 +D+D I + LNM EE++KR+ +L +SG L+++V++V++ LV++ + P NF Sbjct: 238 LFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQG 296 Query: 337 SQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR-LEMDRRFDLQVV 395 GA + + A+ G LYPLE F +V+KPP ++R++++ FV F R R FD ++ Sbjct: 297 HSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIE 356 Query: 396 MLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGIPPALLRGATTGKTSMRAAAVRAEMAI 455 G+ F+++ER E+ L+ F+ +K K +++ ++ M Sbjct: 357 TKQGTQYTFSSIEREEYGKLFDFVNAK------------------KLNIKNRGLKEGMKQ 398 Query: 456 AAEEAARREADGEDDEEADDQDTKYDGKRDPQTFDDEDD----EEDEDFAGDVEDESDGA 511 + +E A + ED +A + K +GK + +D D E DE F ED+ Sbjct: 399 SYDEYADSD---EDQHDAYLERMKEEGKIREENANDSSDGSGEETDESFNPGEEDDDVAE 455 Query: 512 PSDSDA 517 DS+A Sbjct: 456 EFDSNA 461
ref|NP_112383.1| Structure specific recognition protein 1 [Rattus norvegicus] gb|AAH83588.1| Structure specific recognition protein 1 [Rattus norvegicus] (709 aa) Score: 265 bits (676), Expect: 4.36609e-69 Length: 483, Idn/Pos/Gap = 164/268/27 (33%/55%/5%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S+ G LRLS+ G+++ G ++ +L W R A G L+ K+G ++ Sbjct: 17 SMNDGRLRLSRQGIIFKNSKTGKVD-NIQAGELTEGIWRRVALGHGLKLLTKNGHVYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L ++ K + + + V GWN+G V+ G+ + F G + FE+P+ Sbjct: 76 GFRESEFEKLSDFFKTHYRLE--LMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSARV 190 S++SQ +G+NE+ LEFH +D A + L+E+RF P T+ED + A + ++ Sbjct: 134 SNVSQCT-TGKNEVTLEFHQNDDA---EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP D Sbjct: 190 DVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + + VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +SG Sbjct: 250 QRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP + Sbjct: 309 SLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVH 368 Query: 371 LRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMV-- 427 +R++++ FV F R R FD ++ G+ F+++ER E+ L+ F+ +K++ + Sbjct: 369 IRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNR 428 Query: 428 ----GIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK 483 GI P A + + A R + EE RE + D +DD + D Sbjct: 429 GLKEGINPGYDDYADSDEDQHDAYLERMK-----EEGKIREENAND--SSDDSGEETDES 481 Query: 484 RDP 486 +P Sbjct: 482 FNP 484
dbj|BAB03170.1| structure-specific recognition protein 1 (HMG1 DNA-binding protein) [Arabidopsis thaliana] gb|AAO00867.1| recombination signal sequence recognition protein, putative [Arabidopsis thaliana] sp|Q05153|SSRP_ARATH Structure-specific recognition protein 1 homolog (HMG protein) ref|NP_189515.1| structure-specific recognition protein 1 / high mobility group protein / HMG protein [Arabidopsis thaliana] (646 aa) Score: 264 bits (675), Expect: 4.59023e-69 Length: 433, Idn/Pos/Gap = 154/245/33 (35%/56%/7%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFR 78 PG L+++ G+ W + G + V R D+ S+ W + + +QL KDG F GFR Sbjct: 20 PGLLKINSGGIQWKKQGGG-KAVEVDRSDIVSVSWTKVTKSNQLGVKTKDGLYYKFVGFR 78 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQ-GVVGWNFGQVRIEGESVLFVSGSETAFELPISD 137 D +L + + ++ T P +Q V G N+G+V + G ++ F+ GS+ AFE+ ++D Sbjct: 79 DQDVPSLSSFFQSSYGKT---PDEKQLSVSGRNWGEVDLHGNTLTFLVGSKQAFEVSLAD 135 Query: 138 ISQVVRSGRNELALEFHLDDTAGKTD-ECLVEMRFQAPTEE----------------DAI 180 +SQ G+N++ LEFH+DDTAG + + L+E+ F P D I Sbjct: 136 VSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFVGDENRPPSQVFNDTI 195 Query: 181 ALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTV 240 A++S V A +V FE + + PRGRY++EL ++L + G++ D+KI Y +V Sbjct: 196 VAMADVSPGVEDA------VVTFESIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSV 249 Query: 241 RRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRY 300 R+FLLPK ++ H +VISLDPPIR+G T YPH+V+Q D +E L++ E + ++ Sbjct: 250 VRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQF-ETDTVVESELSISDELMNTKF 308 Query: 301 GDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENC 360 DKL G + +V T VLR L + P F +SQ A++++L A DG LYPLE Sbjct: 309 KDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDGVLYPLEKG 368 Query: 361 FFFVNKPPTYLRYEDVDFVEFKRLEMD----RRFDLQVVMLNGSTLLFTNLERSEFSTLY 416 FFF+ KPPT + ++++D+VEF+R FDL + + LF N++R+E+ LY Sbjct: 369 FFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQRNEYHNLY 428 Query: 417 QFLESKQVRMVGI 429 F+ SK ++++ + Sbjct: 429 TFISSKGLKIMNL 441
gb|AAM46895.1| early drought induced protein [Oryza sativa (indica cultivar-group)] (641 aa) Score: 262 bits (669), Expect: 2.78318e-68 Length: 443, Idn/Pos/Gap = 157/251/24 (35%/56%/5%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFR 78 PG ++ GL W R G TI + + DL S+ W + R QL KDG F GFR Sbjct: 20 PGQFKVYSGGLAWK-RQGGGKTIEIEKSDLTSVTWMKVPRAYQLGVRTKDGLFYKFIGFR 78 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQ-GVVGWNFGQVRIEGESVLFVSGSETAFELPISD 137 D ++L ++++ + P +Q V G N+G + I G + F+ GS+ AFE+ ++D Sbjct: 79 EQDVSSLTNFMQKNMGLS---PDEKQLSVSGQNWGGIDINGNMLTFMVGSKQAFEVSLAD 135 Query: 138 ISQVVRSGRNELALEFHLDDTAGKTD-ECLVEMRFQAPTEEDA-IALHAELSARVGSASF 195 +SQ G+ ++ LEFH+DDT G + + L+++ F PT + +A+V + Sbjct: 136 VSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFLGDENRTAAQVLWETI 195 Query: 196 MG--------ESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLP 247 MG E++V FE + + PRGRY +EL ++L + G++ D+KI Y ++ R+FLLP Sbjct: 196 MGVADVDSSEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSIVRLFLLP 255 Query: 248 KPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPK 307 K + H +V++LDPPIR+G T YPH+V+Q + +E L + E L ++Y D+L Sbjct: 256 KSNNPHTFVVVTLDPPIRKGQTLYPHIVIQF-ETEAVVERNLALTKEVLAEKYKDRLEES 314 Query: 308 ISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKP 367 G + +V TKVLR L + P +F + Q +A++++L A DG LYPLE FFF+ KP Sbjct: 315 YKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGLLYPLEKGFFFLPKP 374 Query: 368 PTYLRYEDVDFVEFKRLEM------DRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLES 421 PT + +E+++FVEF+R FDL V + N LF N++RSE+ L+ F+ Sbjct: 375 PTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNIQRSEYHNLFNFING 434 Query: 422 KQVRMVGIPPALLRGATTGKTSM 444 K ++++ + +GAT G T++ Sbjct: 435 KHLKIMNLGDG--QGATGGVTAV 455
ref|NP_914495.1| putative SSRP1 protein [Oryza sativa (japonica cultivar-group)] dbj|BAB03358.1| putative SSRP1 protein [Oryza sativa (japonica cultivar-group)] (641 aa) Score: 261 bits (668), Expect: 3.42873e-68 Length: 443, Idn/Pos/Gap = 157/251/24 (35%/56%/5%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFR 78 PG ++ GL W R G TI + + DL S+ W + R QL KDG F GFR Sbjct: 20 PGQFKVYSGGLAWK-RQGGGKTIEIEKSDLTSVTWMKVPRAYQLGVRTKDGLFYKFIGFR 78 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQ-GVVGWNFGQVRIEGESVLFVSGSETAFELPISD 137 D ++L ++++ + P +Q V G N+G + I G + F+ GS+ AFE+ ++D Sbjct: 79 EQDVSSLTNFMQKNMGLS---PDEKQLSVSGQNWGGIDINGNMLTFMVGSKQAFEVSLAD 135 Query: 138 ISQVVRSGRNELALEFHLDDTAGKTD-ECLVEMRFQAPTEEDA-IALHAELSARVGSASF 195 +SQ G+ ++ LEFH+DDT G + + L+++ F PT + +A+V + Sbjct: 136 VSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFLGDENRTAAQVLWETI 195 Query: 196 MG--------ESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLP 247 MG E++V FE + + PRGRY +EL ++L + G++ D+KI Y ++ R+FLLP Sbjct: 196 MGVADVDSSEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSIVRLFLLP 255 Query: 248 KPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPK 307 K + H +V++LDPPIR+G T YPH+V+Q + +E L + E L ++Y D+L Sbjct: 256 KSNNPHTFVVVTLDPPIRKGQTLYPHIVIQF-ETEAVVERNLALTKEVLAEKYKDRLEES 314 Query: 308 ISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKP 367 G + +V TKVLR L + P +F + Q +A++++L A DG LYPLE FFF+ KP Sbjct: 315 YKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGLLYPLEKGFFFLPKP 374 Query: 368 PTYLRYEDVDFVEFKRLEM------DRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLES 421 PT + +E+++FVEF+R FDL V + N LF N++RSE+ L+ F+ Sbjct: 375 PTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNIQRSEYHNLFNFING 434 Query: 422 KQVRMVGIPPALLRGATTGKTSM 444 K ++++ + +GAT G T++ Sbjct: 435 KHLKIMNLGDG--QGATGGVTAV 455
gb|AAH77083.1| Unknown (protein for IMAGE:7140964) [Danio rerio] (543 aa) Score: 259 bits (662), Expect: 1.50148e-67 Length: 529, Idn/Pos/Gap = 170/275/42 (32%/51%/7%) Query: 16 SLGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNF 74 S G LR SK +++ G + TI V +L +W R G ++ G + Sbjct: 17 SWNDGRLRFSKQTVVYKNSKTGKVDTIPVP--ELTQAQWRRVCLGHGIKLWTSTGHIYKY 74 Query: 75 EGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELP 134 +GF+ AD + EY K+ + + + V GWN+G + G + F FE+P Sbjct: 75 DGFKDADLEKISEYFKDNYKVE--LTEKDMCVKGWNWGTAKFNGPLLSFDVNDSPTFEIP 132 Query: 135 ISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEE--------DAIALHAEL 186 +S +SQ +G+NE+ +EFH +D T+ L+E+RF P +A A + Sbjct: 133 LSSVSQCT-TGKNEVTVEFHQND---DTEVSLMEVRFYVPPTTGDEGSDPVEAFAQNVLS 188 Query: 187 SARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLL 246 A V A+ G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLL Sbjct: 189 KADVIQAT--GDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLL 246 Query: 247 PKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPP 306 P D+ + VISLDPPI+QG T Y H ++ L ++ I + LNM +E+++R+ KL Sbjct: 247 PHKDQRQMFFVISLDPPIKQGQTRY-HFLILLFSKEETISLTLNMNEDEVERRFEGKLNK 305 Query: 307 KISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNK 366 +SG L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+K Sbjct: 306 NMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHK 365 Query: 367 PPTYLRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVR 425 PP +LR+E++ V F R R FD ++ G+ F+++ER E+ L+ F+ +K Sbjct: 366 PPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVNAK--- 422 Query: 426 MVGIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK-- 483 K S++ + + + + ++D ED +A + K +GK Sbjct: 423 ---------------KLSIKNRGFKEKKGMKGNDDMYSDSD-EDQHDAYLERMKEEGKIR 466 Query: 484 RDPQTFDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDDDDDDDDDDDD 532 + DD + E DE F EDE DS A+ + ++ D D+D Sbjct: 467 EEGNDSDDSEGESDESFNPGEEDEDIAEEYDSKASASESSAEEGDSDED 515
gb|EAL24655.1| GA18454-PA [Drosophila pseudoobscura] (722 aa) Score: 257 bits (657), Expect: 6.91266e-67 Length: 417, Idn/Pos/Gap = 151/242/16 (36%/58%/3%) Query: 17 LGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 L G L+L+ +++ G + ISV DL + + F G G LR K G+ F Sbjct: 18 LSSGRLKLTDQNIIFKNNKTGKVEQISVDDIDLINSQKFVGTWG--LRVFTKSGALHRFT 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L +++K+A+ ++ + E V GWN+G R G + F S+T FE+P+ Sbjct: 76 GFRDSEHEKLGKFIKDAY--SQEMVEKEMCVKGWNWGTARFMGSVLSFDKDSKTIFEVPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEEDAI-----ALHAELSARV 190 S +SQ V +G+NE+ LE+H +D A L+EMRF P E A H + ++ Sbjct: 134 SHVSQCV-TGKNEVTLEYHQNDDAPVG---LLEMRFHIPAVESADDDPVEKFHQNVMSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 S GES+ F E+ + PRGRYD+++F T+ +HGK+FDYKI +V R+F+LP D Sbjct: 190 SVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + V+SLDPPI+QG T Y +LVL L D+E + L EL+ +Y KL ++SG Sbjct: 250 SRQMFFVLSLDPPIKQGQTRYHYLVL-LFAPDEETTIELPFSEAELRDKYEGKLEKELSG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 +++V+ KV++VL+ + + P NF+ G A+ + A GYLYPLE F +++KPP + Sbjct: 309 PVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLH 368 Query: 371 LRYEDVDFVEFKRL-EMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 +R+E++ V F R R FD +V + NG+ +F+++E+ E++ L+ F+ K++ + Sbjct: 369 IRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDFITQKKLHV 425
gb|AAO45187.1| SD06504p [Drosophila melanogaster] (723 aa) Score: 257 bits (656), Expect: 8.30549e-67 Length: 417, Idn/Pos/Gap = 151/242/16 (36%/58%/3%) Query: 17 LGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 L G L++++ +++ G + IS DL + + F G G LR K G F Sbjct: 18 LCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWG--LRVFTKGGVLHRFT 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L +++K A+ ++ + E V GWN+G R G + F S+T FE+P+ Sbjct: 76 GFRDSEHEKLGKFIKAAY--SQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPT----EEDAI-ALHAELSARV 190 S +SQ V +G+NE+ LEFH +D A L+EMRF P EED + H + ++ Sbjct: 134 SHVSQCV-TGKNEVTLEFHQNDDAPVG---LLEMRFHIPAVESAEEDPVDKFHQNVMSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 S GES+ F E+ + PRGRYD+++F T+ +HGK+FDYKI +V R+F+LP D Sbjct: 190 SVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + V+SLDPPI+QG T Y +LVL L D+E + L EL+ +Y KL +ISG Sbjct: 250 SRQMFFVLSLDPPIKQGQTRYHYLVL-LFAPDEETTIELPFSEAELRDKYEGKLEKEISG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 +++V+ KV++VL+ + + P NF+ G A+ + A GYLYPLE F +++KPP + Sbjct: 309 PVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLH 368 Query: 371 LRYEDVDFVEFKRL-EMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 +R+E++ V F R R FD +V + NG+ +F+++E+ E++ L+ ++ K++ + Sbjct: 369 IRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHV 425
ref|NP_523830.2| CG4817-PA [Drosophila melanogaster] emb|CAA48471.1| SSRP1 [Drosophila melanogaster] gb|AAF47064.1| CG4817-PA [Drosophila melanogaster] sp|Q05344|SSRP_DROME Single-strand recognition protein (SSRP) (Chorion-factor 5) (723 aa) Score: 257 bits (656), Expect: 8.30549e-67 Length: 417, Idn/Pos/Gap = 151/242/16 (36%/58%/3%) Query: 17 LGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 L G L++++ +++ G + IS DL + + F G G LR K G F Sbjct: 18 LCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWG--LRVFTKGGVLHRFT 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L +++K A+ ++ + E V GWN+G R G + F S+T FE+P+ Sbjct: 76 GFRDSEHEKLGKFIKAAY--SQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPT----EEDAI-ALHAELSARV 190 S +SQ V +G+NE+ LEFH +D A L+EMRF P EED + H + ++ Sbjct: 134 SHVSQCV-TGKNEVTLEFHQNDDAPVG---LLEMRFHIPAVESAEEDPVDKFHQNVMSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 S GES+ F E+ + PRGRYD+++F T+ +HGK+FDYKI +V R+F+LP D Sbjct: 190 SVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + V+SLDPPI+QG T Y +LVL L D+E + L EL+ +Y KL +ISG Sbjct: 250 SRQMFFVLSLDPPIKQGQTRYHYLVL-LFAPDEETTIELPFSEAELRDKYEGKLEKEISG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 +++V+ KV++VL+ + + P NF+ G A+ + A GYLYPLE F +++KPP + Sbjct: 309 PVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLH 368 Query: 371 LRYEDVDFVEFKRL-EMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 +R+E++ V F R R FD +V + NG+ +F+++E+ E++ L+ ++ K++ + Sbjct: 369 IRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHV 425
gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.] sp|Q08943|SSRP_MOUSE Structure-specific recognition protein 1 (SSRP1) (Recombination signal sequence recognition protein) (T160) (708 aa) Score: 256 bits (654), Expect: 1.29246e-66 Length: 483, Idn/Pos/Gap = 162/266/27 (33%/55%/5%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S+ G LRLS +G+++ G ++ +L W R A G L+ K+G ++ Sbjct: 17 SMNDGRLRLSPSGIIFKNSKTGKVD-NIQAGELTEGIWPRVALGHGLKLLTKNGHVYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L ++ K + + + V GWN+G V+ G+ + F G + FE+P+ Sbjct: 76 GFRESEFEKLSDFFKTHYRLE--LMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSARV 190 S++S V ++ R E+ LEFH +D + L+E+RF P T+ED + A + ++ Sbjct: 134 SNVSSVPQA-RIEVTLEFHQND---DPEVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP D Sbjct: 190 DVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + + VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +SG Sbjct: 250 QRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP + Sbjct: 309 SLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVH 368 Query: 371 LRYEDVDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMV-- 427 +R++++ FV F R R FD ++ G+ F+++ER E+ L+ F+ +K++ + Sbjct: 369 IRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNR 428 Query: 428 ----GIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK 483 GI P A + + A R + EE RE + D +DD + D Sbjct: 429 GLKEGINPGYDDYADSDEDQHDAYLERMK-----EEGKIREENAND--SSDDSGEETDES 481 Query: 484 RDP 486 +P Sbjct: 482 FNP 484
gb|AAA28914.1| single-stranded recognition protein (723 aa) Score: 254 bits (648), Expect: 6.9726e-66 Length: 417, Idn/Pos/Gap = 150/241/16 (35%/57%/3%) Query: 17 LGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 L G L++++ +++ G + IS DL + + F G G LR K G F Sbjct: 18 LCSGRLKMTEQNIIFENTKTGKVEQISAEDIDLINSQKFVGTWG--LRVFTKGGVLHRFT 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR ++ L +++K A+ ++ + E V GWN+G R G + F S+T FE+P+ Sbjct: 76 GFRDSEHEKLGKFIKAAY--SQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPT----EEDAI-ALHAELSARV 190 S +SQ V +G+NE+ LEFH +D A L+EMRF P EED + H + ++ Sbjct: 134 SHVSQCV-TGKNEVTLEFHQNDDAPVG---LLEMRFHIPAVESAEEDPVDKFHQNVMSKA 189 Query: 191 GSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPD 250 S GES+ F E+ + PR RYD+++F T+ +HGK+FDYKI +V R+F+LP D Sbjct: 190 SVISASGESIAIFREIQILTPRRRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKD 249 Query: 251 EIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISG 310 + V+SLDPPI+QG T Y +LVL L D+E + L EL+ +Y KL +ISG Sbjct: 250 SRQMFFVLSLDPPIKQGQTRYHYLVL-LFAPDEETTIELPFSEAELRDKYEGKLEKEISG 308 Query: 311 ELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTY 370 +++V+ KV++VL+ + + P NF+ G A+ + A GYLYPLE F +++KPP + Sbjct: 309 PVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLH 368 Query: 371 LRYEDVDFVEFKRL-EMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 +R+E++ V F R R FD +V + NG+ +F+++E+ E++ L+ ++ K++ + Sbjct: 369 IRFEEISSVNFARSGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHV 425
ref|XP_508428.1| PREDICTED: similar to structure specific recognition protein 1; recombination signal sequence recognition protein; chromatin-specific transcription elongation factor 80 kDa subunit; high mobility group box; facilitates chromatin remodeling 80 kDa subunit; cis... [Pan troglodytes] (977 aa) Score: 253 bits (647), Expect: 9.89892e-66 Length: 386, Idn/Pos/Gap = 142/228/14 (36%/59%/3%) Query: 15 QSLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNF 74 +SL G LRLS+ G+++ G ++ +L W R A G L+ K+G + Sbjct: 16 ESLNDGRLRLSRQGIIFKNSKTGKVD-NIQAGELTEGIWRRVALGHGLKLLTKNGHVYKY 74 Query: 75 EGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELP 134 +GFR ++ L ++ K + + + V GWN+G V+ G+ + F G + FE+P Sbjct: 75 DGFRESEFEKLSDFFKTHYRLE--LMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIP 132 Query: 135 ISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSAR 189 +S++SQ +G+NE+ LEFH +D A + L+E+RF P T+ED + A + ++ Sbjct: 133 LSNVSQCT-TGKNEVTLEFHQNDDA---EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSK 188 Query: 190 VGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKP 249 G+++ F EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP Sbjct: 189 ADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHK 248 Query: 250 DEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKIS 309 D+ + VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +S Sbjct: 249 DQRQMFFVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMS 307 Query: 310 GELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPT 369 G L+++V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP Sbjct: 308 GSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPV 367 Query: 370 YLRYEDVDFVEFKR-LEMDRRFDLQV 394 ++R++++ FV F R FDL++ Sbjct: 368 HIRFDEISFVNFAPGTTTTRSFDLEI 393
emb|CAA82251.1| HMG protein [Catharanthus roseus] sp|Q39601|SSRP_CATRO Structure-specific recognition protein 1 homolog (HMG protein) (639 aa) Score: 249 bits (637), Expect: 1.4294e-64 Length: 545, Idn/Pos/Gap = 177/285/60 (32%/52%/11%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFR 78 PG LR+ G+LW + G + V + D+ L W + R +QL KDG F GFR Sbjct: 20 PGQLRVHSGGILWK-KQGGAKAVEVDKSDMVGLTWMKVPRSNQLGVRIKDGLFYKFTGFR 78 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQ-GVVGWNFGQVRIEGESVLFVSGSETAFELPISD 137 D A+L Y++ T P +Q V G N+G+V + G + F+ GS+ AFE+ ++D Sbjct: 79 DQDVASLTSYLQSTCGIT---PEEKQLSVSGKNWGEVDLNGNMLTFLVGSKQAFEVSLAD 135 Query: 138 ISQVVRSGRNELALEFH---LDDTAGKTDECLVEMRFQAPTEED----------AIALHA 184 ++Q G+N++ LEF L + K L+E+ F P A Sbjct: 136 VAQTQLQGKNDVMLEFMWMILLEQMRKNS--LMEISFHVPNSNTQFVGDENRPPAQVFRD 193 Query: 185 ELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMF 244 ++ + + +++V FE + + PRGRY++EL ++L + G++ D+KI Y +V R+F Sbjct: 194 KIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVVRLF 253 Query: 245 LLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKL 304 LLPK ++ H +V++LDPPIR+G T YPH+VLQ D ++ +L++ + L +Y DKL Sbjct: 254 LLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQF-ETDYVVDSSLSISEDLLSTKYKDKL 312 Query: 305 PPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFV 364 P G + +V T +LR L + P F + Q +A++++L A DG LYPLE FFF+ Sbjct: 313 EPTYKGLIHEVFTMILRGLSGAKVTRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFL 372 Query: 365 NKPPTYLRYEDVDFVEFKRLEMD----RRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLE 420 KPPT + +E++D+VEF+R FDL + + LF N++R+E+ L+ F+ Sbjct: 373 PKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS 432 Query: 421 SKQVRMVGIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKY 480 SK +++ M A +A AI A EDD++A D + Sbjct: 433 SKGLKI-----------------MNLGADKAADAITA-------VLQEDDDDAVDPHLE- 467 Query: 481 DGKRDPQTFDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDDDDDDDDDDDDDDEALEAE 540 + + DE DEEDEDF D++DE G+P+ DD + + D D +E + + Sbjct: 468 --RIKNEAGGDESDEEDEDFVADIDDE--GSPT------DDSGEGESDGSDSGNEEIPTK 517 Query: 541 LEPEE 545 +P++ Sbjct: 518 KKPKK 522
gb|AAU44310.1| putative HMG-box with DNAbinding protein [Oryza sativa (japonica cultivar-group)] gb|AAW57821.1| putative HMG-box with DNAbinding protein [Oryza sativa (japonica cultivar-group)] (640 aa) Score: 248 bits (632), Expect: 5.16649e-64 Length: 446, Idn/Pos/Gap = 153/249/30 (34%/55%/6%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFR 78 PG +L GL W R G TI V + D+ S+ W R QL + K+G F GFR Sbjct: 20 PGQFKLYSGGLAWK-RQGGGKTIEVEKSDITSVTWMAIPRSYQLGVSTKEGLFYRFFGFR 78 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQ-GVVGWNFGQVRIEGESVLFVSGSETAFELPISD 137 D ++L ++++ T P +Q V G N+G + I G + F GS+ AFE+ ++D Sbjct: 79 EQDISSLTNFMEKNMRIT---PEEKQLSVGGHNWGGIEINGNMLSFNVGSKEAFEVSLAD 135 Query: 138 ISQVVRSGRNELALEFHLDDTAGKTD-ECLVEMRFQAPTEED-----------AIALHAE 185 ++Q G+ ++ LEFH+DDT G + + L+++ F PT + A Sbjct: 136 VAQTQMQGKTDVVLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFPGDENRPSAQVLWQAI 195 Query: 186 LS-ARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMF 244 L+ A VGS+ E++V F+ + + PRGRY +EL ++L + G++ D+KI Y ++ R+F Sbjct: 196 LNKADVGSSE---EAVVTFDGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSILRLF 252 Query: 245 LLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKL 304 +LPK + H +VI+LDPPIR+G T YPH+V+Q + ++ L + E L ++Y D+L Sbjct: 253 VLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQF-ETEAVVQRDLTLSDEVLAEKYKDRL 311 Query: 305 PPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFV 364 G + +V +KVLR L + P F + Q +A++++L A DG LYPLE FFF+ Sbjct: 312 ENSYQGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDGLLYPLEKGFFFL 371 Query: 365 NKPPTYLRYEDVDFVEFKRLEM------DRRFDLQVVMLNGSTLLFTNLERSEFSTLYQF 418 KPPT + +E++++VEF+R FDL V + N LF N++R+E+ L+ F Sbjct: 372 PKPPTLILHEEIEYVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNIQRNEYHNLFNF 431 Query: 419 LESKQVRMVGIPPALLRGATTGKTSM 444 + K ++++ + A +G G T++ Sbjct: 432 ISGKHLKILNLGEA--QGRAGGVTAV 455
emb|CAG04782.1| unnamed protein product [Tetraodon nigroviridis] (669 aa) Score: 248 bits (632), Expect: 5.20977e-64 Length: 462, Idn/Pos/Gap = 145/238/59 (31%/51%/12%) Query: 16 SLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFE 75 S G LR SK +++ G S+ +L +W R G ++ G ++ Sbjct: 17 SWNDGRLRFSKQNVVYKSSKTGKVD-SIPAGELNLAQWRRVCLGHGIKLGTSTGHIYKYD 75 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GFR D + E+ K + + + V GWN+G + G + F TAFE+P+ Sbjct: 76 GFRDTDFEKISEFFKANYKVE--LTEKDMSVKGWNWGTAKFSGPLLQFDINENTAFEIPL 133 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRF----------QAPTEEDAIALHAE 185 S++SQ +G+NE+ LEFH +D T+ L+E+RF Q P E+ A Sbjct: 134 SNVSQCA-TGKNEVTLEFHQND---DTEISLMEVRFYVPPNQTDERQDPVEDSPQAFAQN 189 Query: 186 LSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFL 245 + ++ G+++ F+EL + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FL Sbjct: 190 VLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFL 249 Query: 246 LPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLP 305 LP D+ + VISLDPPI+QG T Y L+L ++++ I +ALNM E++++R+ KL Sbjct: 250 LPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEN-INLALNMSEEDVERRFEGKLS 308 Query: 306 PKISGELWQVVTKVLRVLVDKPLHAPKNFV------------------------------ 335 +SG L+++V++V++ LV++ + P NF Sbjct: 309 KHMSGSLYEMVSRVMKALVNRKITVPGNFQGYVSNPANKTLVWLGGVCVCVCVCVGGYLQ 368 Query: 336 ----------TSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR-L 384 + GA + + A+ G LYPLE F +V+KPP +LR+E++ V F R Sbjct: 369 AVFKCCSFFRSHSGAQCITCSFKASSGLLYPLERGFIYVHKPPVHLRFEEISCVNFARGT 428 Query: 385 EMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 R FD ++ G+ F+++ER E+ L+ F+ +K++ + Sbjct: 429 TTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVNAKKLNI 470
emb|CAA22834.1| SPBC609.05 [Schizosaccharomyces pombe] ref|NP_596315.1| similar to yeast POB3 protein that binds to DNA polymerase I; putative structure specific recognition protein [Schizosaccharomyces pombe] pir||T40576 probable structure recognition/chromatin-associated HMG protein - fission yeast (Schizosaccharomyces pombe) (512 aa) Score: 247 bits (631), Expect: 7.09404e-64 Length: 442, Idn/Pos/Gap = 154/245/30 (34%/55%/6%) Query: 8 DPVYVTDQSLGPGSLRLSKAGLLW-SPRNEGLYTISVAREDLASLRWFRGARGDQLRCTR 66 D +Y+ + S PG LR++ +GL W SP +T+ ++ ++ W R ARG +L+ Sbjct: 9 DNIYL-NLSEKPGKLRIAPSGLGWKSPSLAEPFTLPIS--EIRRFCWSRFARGYELKIIL 65 Query: 67 KDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSG 126 K V+ +GF D L +K+ + G+ + E + GWN+G+ G ++F Sbjct: 66 KSKDPVSLDGFSQEDLDDLINVIKQNF--DMGIEQKEFSIKGWNWGEANFLGSELVFDVN 123 Query: 127 SETAFELPISDISQVVRSGRNELALEFHLDDT----AGKTDECLVEMRFQAP-------- 174 S AFE+PIS ++ SG+NE+ALEF D + + DE LVEMR P Sbjct: 124 SRPAFEIPISAVTNTNLSGKNEVALEFSTTDDKQIPSAQVDE-LVEMRLYVPGTTAKEDA 182 Query: 175 -----TEEDAIALHAE-LSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHG 228 E++A L E L R G+++V F E+ + PRGRYD++++ T + + G Sbjct: 183 ADGEEVEQNAANLFYESLKERADIGQAAGDAIVSFSEILLLTPRGRYDIDMYETCMRLRG 242 Query: 229 KSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVA 288 K++DYK+ Y ++ +FLLPKPDE H+ VI L+PP+RQG T YP LV Q RD+D +EV Sbjct: 243 KTYDYKVEYSSINSLFLLPKPDEQHVVFVIGLEPPLRQGQTRYPFLVTQFVRDED-MEVD 301 Query: 289 LNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALG 348 LN++ L+++Y DK+ ++VV+++ R L + + P F++ +G A++ + Sbjct: 302 LNIEETVLKEKYADKVKASYDQPAFEVVSQIFRGLTGRKVTTPAEFLSHEGHAAVKCSYK 361 Query: 349 ANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEMD----RRFDLQVVMLNGSTLLF 404 AN+G LY L+ F F+ KP + D+ V R+ M R FDL + +G++ F Sbjct: 362 ANEGQLYCLDKSFLFIPKPTLLMNTSDITRVTLSRVGMSVSAARTFDLTFTLRSGTSYQF 421 Query: 405 TNLERSEFSTLYQFLESKQVRM 426 +N+ R E S L FLESKQ+++ Sbjct: 422 SNINRVEQSALVAFLESKQIKI 443
gb|EAA00360.2| ENSANGP00000009009 [Anopheles gambiae str. PEST] ref|XP_320213.2| ENSANGP00000009009 [Anopheles gambiae str. PEST] (634 aa) Score: 246 bits (629), Expect: 1.13193e-63 Length: 516, Idn/Pos/Gap = 161/278/40 (31%/53%/7%) Query: 16 SLGPGSLRLSKAGLLWSPRNEG-LYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNF 74 ++ PG L+++ +++ G + I+ + +L + + F G+ G LR K+GS F Sbjct: 17 AMCPGKLKMTDTAMVFKSDKTGKVEQINSSDIELLNYQRFVGSFG--LRVFLKNGSLHRF 74 Query: 75 EGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELP 134 GF D A + E+VK+ + + E + GWN+G V+ +G + F ++T+FE+P Sbjct: 75 LGF-TGDEAKIAEFVKKNYKLD--MLEKELSMRGWNWGSVQFKGAVLSFDVENKTSFEIP 131 Query: 135 ISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEEDA------IALHAELSA 188 ++ +SQ G+NE+ +EFH +D A + L+EMRF PT E A A + Sbjct: 132 LNHVSQC-NVGKNEVTVEFHRNDDAPVS---LMEMRFHIPTSESAGDVDPVEAFQENVMK 187 Query: 189 RVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPK 248 + S G+++ F E+ + PRGRYD+++F ++ +HGK++D+KI +V R+FLLP Sbjct: 188 QASVISVSGDAIAIFREIHCLTPRGRYDIKVFQSFFQLHGKTYDFKIPTSSVLRLFLLPH 247 Query: 249 PDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKI 308 D + VISLDPPI+QG T Y H ++ L + D+E + L EEL+++Y DKL ++ Sbjct: 248 KDNRQMFFVISLDPPIKQGQTRY-HFLVTLFQMDEETNIELPFTEEELKEKYEDKLTKEL 306 Query: 309 SGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPP 368 SG +++V+ K+++V++++ L P F+ G A+ + A GYLYPLE F +V+KPP Sbjct: 307 SGPVYEVLGKIMKVIINRKLTGPGTFIGHSGTPAIGCSFKAAAGYLYPLERGFIYVHKPP 366 Query: 369 TYLRYEDVDFVEFKRL-EMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMV 427 ++R+E++ V F R R FD ++ + G+ F+++E+ E+S L+ F+ SK++ + Sbjct: 367 VHIRFEEISTVNFARSGGSTRSFDFEIELKTGTVHTFSSIEKEEYSKLFDFIVSKKLNVK 426 Query: 428 GIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGKRDPQ 487 T GK S + ++ A + +GE D + + + Sbjct: 427 N---------TGGKASYK------------DDFADSDNEGEPDAYLARVKAEAKERDEDD 465 Query: 488 TFDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDDD 523 D ++ DEDF + + ESD A A+ D Sbjct: 466 DGSDSEESTDEDFNPN-QQESDVAEEKKSTAKKSSD 500
emb|CAB96421.1| SSRP1 protein [Zea mays] (639 aa) Score: 246 bits (628), Expect: 1.50322e-63 Length: 431, Idn/Pos/Gap = 150/239/28 (34%/55%/6%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFR 78 PG ++ GL W R G TI + + D+ ++ W + R QL K G F GFR Sbjct: 20 PGQFKVHSGGLAWK-RQGGGKTIEIDKADVTAVTWMKVPRAYQLGVRIKAGLFYRFIGFR 78 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQ-GVVGWNFGQVRIEGESVLFVSGSETAFELPISD 137 D + L ++++ T P +Q V G N+G + I+G + F+ GS+ AFE+ + D Sbjct: 79 EQDVSNLTNFIQKNMGVT---PDEKQLSVSGQNWGGIDIDGNMLTFMVGSKQAFEVSLPD 135 Query: 138 ISQVVRSGRNELALEFHLDDTAGKTD-ECLVEMRFQAPT-------EEDAIALHAELS-- 187 ++Q G+ ++ LE H+DDT G + + L+++ F PT +E H Sbjct: 136 VAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFVGDESRPPAHILWETI 195 Query: 188 ---ARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMF 244 A VGS+ E +V FE + + PRGRY +EL ++L + G++ D+KI Y ++ R+F Sbjct: 196 LKFADVGSSE---EPVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSIVRLF 252 Query: 245 LLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKL 304 LLPK + H +VI+LDPPIR+G T YPH+V+Q + +E L + E L ++Y D+L Sbjct: 253 LLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQF-ETEAVVERDLALSKELLVEKYKDRL 311 Query: 305 PPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFV 364 G + +V TKVLR L + P +F + Q +A++++L A DG LYPLE FFF+ Sbjct: 312 EESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGLLYPLEKGFFFL 371 Query: 365 NKPPTYLRYEDVDFVEFKRLEM------DRRFDLQVVMLNGSTLLFTNLERSEFSTLYQF 418 KPPT + +E+++FVEF+R FDL V + N LF N++R+E+ L+ F Sbjct: 372 PKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNIQRNEYHNLFNF 431 Query: 419 LESKQVRMVGI 429 + K ++++ + Sbjct: 432 INGKNIKIMNL 442
dbj|BAA02719.1| high mobility group protein [Arabidopsis thaliana] (644 aa) Score: 245 bits (626), Expect: 2.47994e-63 Length: 433, Idn/Pos/Gap = 148/236/33 (34%/54%/7%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFR 78 PG L+++ G W + G + V R D+ S+ W + + +QL KDG F GFR Sbjct: 20 PGLLKINSGGXQWKKQGGG-KAVEVDRSDIVSVSWTKVTKSNQLGVKTKDGLYYKFVGFR 78 Query: 79 PADRATLEEYVKEAWAWTKGVPRGEQ-GVVGWNFGQVRIEGESVLFVSGSETAFELPISD 137 D +L + + ++ T P +Q V G N+G+V + G ++ F+ GS+ AFE+ ++D Sbjct: 79 DQDVPSLSSFFQSSYGKT---PDEKQLSVSGRNWGEVDLHGNTLTFLVGSKQAFEVSLAD 135 Query: 138 ISQVVRSGRNELALEFHLDDTAGKTDEC-LVEMRFQAPTEE----------------DAI 180 +SQ G+N++ LEF L + L+E+ F P D I Sbjct: 136 VSQTQLQGKNDVTLEFMLMILLVLMRKTPLMEISFHIPNSNTQFVGDENRPPSQVFNDTI 195 Query: 181 ALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTV 240 A++S V A +V FE + + PRGRY++EL ++L + ++ D+KI Y +V Sbjct: 196 VAMADVSPGVEDA------VVTFESIAILTPRGRYNVELHLSFLRLQEQANDFKIQYSSV 249 Query: 241 RRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRY 300 R+FLLPK ++ H +VISLDPPIR+G T YPH+V+Q D +E L++ E + ++ Sbjct: 250 VRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQF-ETDTVVESELSISDELMNTKF 308 Query: 301 GDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENC 360 DKL G + +V T VLR L + P F +SQ A++++L A DG LYPLE Sbjct: 309 KDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDGVLYPLEKG 368 Query: 361 FFFVNKPPTYLRYEDVDFVEFKRLEMD----RRFDLQVVMLNGSTLLFTNLERSEFSTLY 416 FFF+ KPPT + ++++D+VEF+R FDL + + LF N++R+E+ LY Sbjct: 369 FFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQRNEYHNLY 428 Query: 417 QFLESKQVRMVGI 429 F+ SK ++++ + Sbjct: 429 TFISSKGLKIMNL 441
pir||S35511 high mobility group protein - Arabidopsis thaliana (643 aa) Score: 236 bits (603), Expect: 1.17136e-60 Length: 411, Idn/Pos/Gap = 142/226/32 (34%/54%/7%) Query: 41 ISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVP 100 + V R D+ S+ W + + +QL KDG F GFR D +L + + ++ T P Sbjct: 40 VEVDRSDIVSVSWTKVTKSNQLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKT---P 96 Query: 101 RGEQ-GVVGWNFGQVRIEGESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTA 159 +Q V G N+G+V + G ++ F+ GS+ AFE+ ++D+SQ G+N++ LEF L Sbjct: 97 DEKQLSVSGRNWGEVDLHGNTLTFLVGSKQAFEVSLADVSQTQLQGKNDVTLEFMLMILL 156 Query: 160 GKTDEC-LVEMRFQAPTEE----------------DAIALHAELSARVGSASFMGESLVF 202 + L+E+ F P D I A++S V A +V Sbjct: 157 VLMRKTPLMEISFHIPNSNTQFVGDENRPPSQVFNDTIVAMADVSPGVEDA------VVT 210 Query: 203 FEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDP 262 FE + + PRGRY++EL ++L + ++ D+KI Y +V R+FLLPK ++ H +VISLDP Sbjct: 211 FESIAILTPRGRYNVELHLSFLRLQEQANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDP 270 Query: 263 PIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRV 322 PIR+G T YPH+V+Q D +E L++ E + ++ DKL G + +V T VLR Sbjct: 271 PIRKGQTMYPHIVMQF-ETDTVVESELSISDELMNTKFKDKLERSYKGLIHEVFTTVLRW 329 Query: 323 LVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFK 382 L + P F +SQ A++++L A DG LYPLE FFF+ KPPT + ++++D+VEF+ Sbjct: 330 LSGAKITKPGKFRSSQDGFAVKSSLKAEDGVLYPLEKGFFFLPKPPTLILHDEIDYVEFE 389 Query: 383 RLEMD----RRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGI 429 R FDL + + LF N++R+E+ LY F+ SK ++++ + Sbjct: 390 RHAAGGANMHYFDLLIRLKTDHEHLFRNIQRNEYHNLYTFISSKGLKIMNL 440
ref|XP_584174.1| PREDICTED: similar to structure specific recognition protein 1, partial [Bos taurus] (670 aa) Score: 235 bits (599), Expect: 3.61312e-60 Length: 405, Idn/Pos/Gap = 142/228/36 (35%/56%/8%) Query: 106 VVGWNFGQVRIEGESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDEC 165 V GWN+G V+ G+ + F G + FE+P+S++SQ +G+NE+ LEFH +D A + Sbjct: 24 VKGWNWGTVKFGGQLLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDA---EVS 79 Query: 166 LVEMRFQAP-TEEDAI----ALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELF 220 L+E+RF P T+ED + A + ++ G+++ F EL + PRGRYD+ ++ Sbjct: 80 LMEVRFYVPPTQEDGVDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIY 139 Query: 221 PTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRR 280 PT+L + K+FDYKI Y TV R+FLLP D+ + VISL PI+QG T Y L+L + Sbjct: 140 PTFLHLPPKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLFSPIKQGQTRYHFLILLFSK 199 Query: 281 DDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGA 340 D+D I + LNM EE++KR+ +L +SG L+ +V++V++ LV++ + P NF GA Sbjct: 200 DED-ISLTLNMNEEEVEKRFEGRLTKNMSGSLYPMVSRVMKALVNRKITVPGNFQGHSGA 258 Query: 341 HALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR-LEMDRRFDLQVVMLNG 399 + + A+ G LYPLE F +V+KPP ++R++++ FV F R R FD ++ G Sbjct: 259 QCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQG 318 Query: 400 STLLFTNLERSEFSTLYQFLESKQVRMVGIPPALLRGATTGKTSMRAAAVRAEMAIAAEE 459 + F+++ER E+ L+ F+ +K K +++ ++ M + +E Sbjct: 319 TQYTFSSIEREEYGKLFDFVNAK------------------KLNIKNRGLKEGMNPSYDE 360 Query: 460 AARREADGEDDEEADDQDTKYDGK-RDPQTFDDEDD---EEDEDF 500 A + ED +A + K +GK R+ D DD E DE F Sbjct: 361 YADSD---EDQHDAYLERMKEEGKIREENANDSSDDSGEETDESF 402
gb|EAA68250.1| hypothetical protein FG02518.1 [Gibberella zeae PH-1] ref|XP_382694.1| hypothetical protein FG02518.1 [Gibberella zeae PH-1] (569 aa) Score: 234 bits (598), Expect: 4.30506e-60 Length: 560, Idn/Pos/Gap = 169/285/71 (30%/50%/12%) Query: 1 MSAAQVIDPVYVTDQSLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGD 60 M+A + D +Y+ D S G R ++ G W P G T ++ ++AS +W R A+G Sbjct: 1 MTAIESFDNIYL-DLSKESGKCRFAETGFGWKPVGGG-DTFTLDHNNIASAQWSRAAKGY 58 Query: 61 QLRCTRKDGS-TVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGE 119 +++ ++ S + +GF+ D L + K W ++ + E + GWN+G+ Sbjct: 59 EIKIVQRSKSGIIQLDGFQQEDYDRLAKVFKN-W-YSTVLESKEHALRGWNWGKAEFSKS 116 Query: 120 SVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDT---------------AGKTDE 164 + F + AFELP S+I +GRNE+A+E L ++ A + Sbjct: 117 ELTFSVQNRPAFELPYSEIGNTNLAGRNEVAVEMALPESGANAQLGGARSKGSKAAAGRD 176 Query: 165 CLVEMRFQAP---------------------TEEDAIALHAEL---SARVGSASFMGESL 200 LVEMRF P E++A L E A +G + G+++ Sbjct: 177 QLVEMRFYIPGVTTRKEAEGEDAGSDAGNDEQEKNAATLFYETLIDKAEIGETA--GDTI 234 Query: 201 VFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISL 260 F ++ + PRGR+D++++ + GK++DYKI Y+ +++ +LPKPDE+H LV+ L Sbjct: 235 ATFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYEAIKKFMVLPKPDEVHYMLVMGL 294 Query: 261 DPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVL 320 DPP+RQG T YP +V+Q ++ D+E+ + LN+ EEL+ +Y DKL P L QVV K+ Sbjct: 295 DPPLRQGQTRYPFVVMQFKK-DEEVTIDLNLNEEELKSKYQDKLEPHYEEPLHQVVAKIF 353 Query: 321 RVLVDKPLHAP-KNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFV 379 R L ++ + +P K+F+T + + ++ ++ A++G+LY LE F FV KP TY+ YE V Sbjct: 354 RGLGNRKISSPAKDFITHRNQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSV 413 Query: 380 EFKRLEMD----RRFDLQVVMLNGS-TLLFTNLERSEFSTLYQFLESKQVRMVGIPPALL 434 F R+ FD+ V++ NG+ + F+N+ R + L F + K +R + Sbjct: 414 TFSRVSGAVSALSTFDITVLLKNGAGSSQFSNISREDLKALESFFKLKGLR--------V 465 Query: 435 RGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGKRDPQTFDDEDD 494 + ++ AAA+ +M + +E A + G DE+ + D + +T + D Sbjct: 466 KNEIDEDANLLAAAMNQQMDDSEDEVAAKADRGSADEDEESVDEDF------RTDSESDV 519 Query: 495 EEDEDFAGDVEDESDGAPSD 514 E+ D A ESDG+ SD Sbjct: 520 AEEYDSA----HESDGSGSD 535
emb|CAG87121.1| unnamed protein product [Debaryomyces hansenii CBS767] ref|XP_458960.1| unnamed protein product [Debaryomyces hansenii] (540 aa) Score: 234 bits (596), Expect: 7.46688e-60 Length: 453, Idn/Pos/Gap = 144/237/46 (31%/52%/10%) Query: 14 DQSLGPGSLRLSKAGLLW--------SPRNEGLYTISVAREDLASLRWFRGARGDQLRCT 65 +QS G +R++ +GL W S N + + E++ + +W RG+RG +LR Sbjct: 12 NQSKNYGRMRIADSGLGWKASVTNNASASNNAPFLLP--SEEILASQWSRGSRGYELRVQ 69 Query: 66 RKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVS 125 K+ V +GF D A L++ ++ + + E + GWN+G+ + ++F Sbjct: 70 TKNKGVVMLDGFDVEDFANLKQELQRNF--QVNLEHKEHSLRGWNWGKTDLARNELVFQV 127 Query: 126 GSETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP-TEED------ 178 ++ FE+P S+IS +G+NE+A+EF+LD K + +VEMRF P T E+ Sbjct: 128 NNKPDFEIPYSEISNSNLTGKNEVAVEFNLDGANSKAGDEMVEMRFYIPGTLENETTPAV 187 Query: 179 ------------------AIALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELF 220 A + +L + GE++V F ++ F+ PRGRYD++++ Sbjct: 188 KNEENGEVKEEETEEISAATVFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGRYDIDMY 247 Query: 221 PTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRR 280 PT L + GK++DYKI Y + R+F LPKPDE H LVI +DPP+RQG T YP LV+Q + Sbjct: 248 PTSLRLRGKTYDYKIQYNQIERIFSLPKPDEAHHLLVIQIDPPLRQGQTKYPFLVMQFAK 307 Query: 281 DDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGA 340 ++EIE+ LN+ EE +Y D+L + V++ + L ++ L P +F + Sbjct: 308 -EEEIELDLNVSEEEYNDKYKDRLKKSYDSQTHLVMSHCFKGLTERRLVVPGSFQSRFLQ 366 Query: 341 HALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR-----LEMDRRFDLQVV 395 + +L A++GYLYPL+ CF FV KP Y+ + ++ + R + R FD+ + Sbjct: 367 PGISCSLKASEGYLYPLDRCFLFVTKPTVYIPFSEISSITMSRTGAGGVSTSRTFDMDIT 426 Query: 396 MLNGSTLL--FTNLERSEFSTLYQFLESKQVRM 426 L GS F ++ER E T+ + K +R+ Sbjct: 427 -LRGSNQSHNFGSIEREEQETIENYCLQKGLRI 458
gb|AAS52821.1| AER138Cp [Ashbya gossypii ATCC 10895] ref|NP_984997.1| AER138Cp [Eremothecium gossypii] (542 aa) Score: 234 bits (596), Expect: 7.72029e-60 Length: 560, Idn/Pos/Gap = 167/274/76 (29%/48%/13%) Query: 14 DQSLGPGSLRLSKAGLLWSPRNEGLYT-------ISVAREDLASLRWFRGARGDQLRCTR 66 +QS G RL + GL W G I + ++LAS++W RG RG +L+ Sbjct: 11 NQSKVSGRFRLGEGGLGWKASATGGSAAMQNNEPILLTADELASVQWSRGCRGYELKINT 70 Query: 67 KDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSG 126 K+ V +GF D L+ ++ + + + + GWN+G + ++F Sbjct: 71 KNKGVVQLDGFSQEDFTLLKNDLQRRF--NVQLEHKDHSLRGWNWGTTDLTRNELIFSLN 128 Query: 127 SETAFELPISDISQVVRSGRNELALEFHLD-DTAGKTDECLVEMRFQAP---TEED---- 178 + FE+P S IS + +NE+ALEF L D + LVEMR P T+ED Sbjct: 129 GKPTFEIPYSHISNTNLTSKNEVALEFDLQKDGYNPAGDELVEMRLYVPGVVTQEDRHSS 188 Query: 179 -------------------AIALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLEL 219 A A + EL A+ G++++ F+++ F PRGRYD+++ Sbjct: 189 PAEDADVDMEKDNKEEKSIAEAFYEELRAKAEIGEVSGDAIISFQDVFFTTPRGRYDIDI 248 Query: 220 FPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLR 279 + + + GK+++YK+ ++ ++R+F LPK D+IH +V+S++PP+RQG TTYP+LVLQ + Sbjct: 249 YKNSIRLRGKTYEYKLQHRQIQRIFSLPKADDIHHLMVLSIEPPLRQGQTTYPYLVLQFQ 308 Query: 280 RDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQG 339 + D+E EV LN++ +E ++ Y DKL + + V++ VL+ L D + P + + Sbjct: 309 K-DEETEVQLNVEDDEFERLYKDKLKKQYDAKTHVVLSHVLKGLTDTRVVVPGEYKSKHE 367 Query: 340 AHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR----LEMDRRFDLQVV 395 A+ + AN+G+LYPL+N F F+ KP Y+ ++DV V R R FDL+VV Sbjct: 368 QCAVSCSFKANEGHLYPLDNAFMFLTKPTLYIPFQDVSSVNISRAGQATTSSRTFDLEVV 427 Query: 396 ML-NGSTLLFTNLERSEFSTLYQFLESKQVRMVGIPPALLRGATTGKTSMRAAAVRAEMA 454 + N + F N+ + E L FL+SK VR+ K + R + A Sbjct: 428 LRSNRGSTTFANISKEEQQILESFLKSKNVRV--------------KNEEKETQQRLQTA 473 Query: 455 IAAEEAARREADGEDDEEADDQDTKYDGKRDPQTFDDEDDEEDEDFAGDVEDESDGAPSD 514 + G D E+ D + + ++D+ DEDF + ED+ D Sbjct: 474 L-----------GSDSEDED---------VNMGSAAEDDESVDEDFQAESEDDDVAEEFD 513 Query: 515 SDAARDDDDDDDDDDDDDDD 534 SDA + + + D D +D Sbjct: 514 SDAGVSESETEAADGADTED 533
gb|EAK85684.1| hypothetical protein UM04416.1 [Ustilago maydis 521] ref|XP_402031.1| hypothetical protein UM04416.1 [Ustilago maydis 521] (558 aa) Score: 231 bits (590), Expect: 3.89602e-59 Length: 461, Idn/Pos/Gap = 147/236/57 (31%/51%/12%) Query: 19 PGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQL-----------RCTRK 67 PG LR+S+ GL W P TI++ + +AS +W R AR QL + Sbjct: 18 PGKLRMSQGGLGWKPSVGEGSTITIPADQMASFQWIRVARNYQLAIYLNKDRDAPSSAQT 77 Query: 68 DGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGS 127 + NF+GF D L ++++ + K + E GWN+GQ +I V F+ Sbjct: 78 NPRRTNFDGFVRDDFDRLSSHIRQ--YFNKPLEAKEVSTRGWNWGQAKISNHDVQFLVRD 135 Query: 128 ETAFELPISDISQVVRSGRNELALEF------HLDDTAGKTD-----------ECLVEMR 170 + AFELP+S ++ + E+++EF G +D + LVEMR Sbjct: 136 KLAFELPLSHLAN-SNIAKTEVSMEFLNPEQQQPGANTGTSDVNGTKSRRSKGDQLVEMR 194 Query: 171 FQAP---------------------TEEDAIALHAELSARVGSASFMGESLVFFEELPFI 209 P E A A H L ++ G+S+V F+E+ + Sbjct: 195 LYVPGQAIKDDGSDAASAQDDDVNNEETAAEAFHEALKSKADIGQVAGDSIVVFKEVLVL 254 Query: 210 VPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNT 269 PRGRYD+++F T++ + GK++DYKILY ++ ++FLLPK DEIH+ LVI LDPPIRQG T Sbjct: 255 TPRGRYDIDVFSTFIRLRGKTYDYKILYSSMNKLFLLPKADEIHVMLVIGLDPPIRQGQT 314 Query: 270 TYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLH 329 YP+LVLQ R ++E++ LN+ + +Q++Y KL + +++VT + +VL + + Sbjct: 315 RYPYLVLQFPR-EEEMDAELNLDEQTIQEKYDGKLKKRYEEPTFRIVTNIFKVLSGQKVA 373 Query: 330 APKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR----LE 385 P +F +S G +++ + A DG LYPLE +V+K P Y+ Y ++ R + Sbjct: 374 TPTDFESSSGQTSIKCNVKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILSRVGGAVA 433 Query: 386 MDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 + FDL+V +G+ F ++ R E L +L ++VR+ Sbjct: 434 SSKTFDLRVATKSGTEHTFQSISREELDRLKAWLADRKVRI 474
emb|CAE60458.1| Hypothetical protein CBG04066 [Caenorhabditis briggsae] (689 aa) Score: 231 bits (589), Expect: 4.83989e-59 Length: 421, Idn/Pos/Gap = 135/238/21 (32%/56%/4%) Query: 17 LGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGSTVNFEG 76 L PG+L++ ++ G TI ++ D+ +RW + +R KDG + F G Sbjct: 17 LTPGTLKVEDTSAIFKSDKAG-KTIKLSPGDIKDIRWQKLGNRPGIRFGLKDGGSHRFGG 75 Query: 77 FRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPIS 136 F+ AD + + +W G+ + + GWN+G V+++G++V F + FE+P + Sbjct: 76 FKEADFGKILVVTESSWGL--GIEKTNLVIKGWNYGNVQVKGKNVEFSWENNPIFEIPCT 133 Query: 137 DISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTE---EDAIALHAELS----AR 189 ++SQ V + +NE LEFH + + L+EMRF P + ED I E A Sbjct: 134 NVSQCV-ANKNEAVLEFHQHENNPIS---LMEMRFHMPVDPENEDDIDRVEEFKQAVLAY 189 Query: 190 VGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKP 249 G + + + ++ PRGRYD++++PT +++HGK++DYKI KT+ R+FL+P Sbjct: 190 AGLEAETEQPITLLSDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKTITRLFLVPHK 249 Query: 250 DEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDD-EIEVALNMKPEELQKRYGDKLPPKI 308 D H+ V++L+PPIRQG T Y +LV + +DDD E+E+AL ++L+++YG +L ++ Sbjct: 250 DGRHVYFVLALNPPIRQGQTRYTYLVFEFVKDDDQEMEIALT---DDLKEKYGGQLKSEM 306 Query: 309 SGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPP 368 G L++ V+ + +V+ + + P F+ S G A++ + N G LYPLE F F++KP Sbjct: 307 DGPLYENVSILFKVVCNLKVTVPGRFIGSSGTPAIQCSHKQNPGLLYPLEKGFLFIHKPV 366 Query: 369 TYLRYEDVDFVEFKRLE---MDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVR 425 Y+R E++ F R + + R FD ++ M +G +++F +E+ E L+ +L K+++ Sbjct: 367 MYIRLEEISSCHFARSDAGTVTRTFDFEIDMKSGQSVMFNAMEKEENHKLFDYLNKKEIK 426 Query: 426 M 426 + Sbjct: 427 I 427
emb|CAG62236.1| unnamed protein product [Candida glabrata CBS138] ref|XP_449262.1| unnamed protein product [Candida glabrata] (543 aa) Score: 229 bits (584), Expect: 1.90157e-58 Length: 538, Idn/Pos/Gap = 158/271/73 (29%/50%/13%) Query: 8 DPVYVTDQSLGPGSLRLSKAGLLW---------SPRNEGLYTISVAREDLASLRWFRGAR 58 D +++ G G R++ +GL W S +N+ + + +L++++W RG R Sbjct: 6 DRIFMNQSKFG-GRFRIADSGLGWKVSTSGGSASAQNKAPFLLPAT--ELSTVQWSRGCR 62 Query: 59 GDQLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEG 118 G +L+ K+ + EGF D ++ ++ V E + GWN+GQ + Sbjct: 63 GFELKINTKNQGVIQLEGFSEDDFNIIKGDFHRRFSIQ--VEHKEHSLRGWNWGQTDLAR 120 Query: 119 ESVLFVSGSETAFELPISDISQVVRSGRNELALEFHL-DDTAGKTDECLVEMRFQAP--- 174 ++F + FE+P + I+ + +NE+A+EF++ DDT + +VEMRF P Sbjct: 121 NEMVFALNGKPVFEIPYARINNTNLTAKNEVAVEFNIQDDTYQPAGDEMVEMRFYLPGSV 180 Query: 175 -TEED-----------------------AIALHAELSARVGSASFMGESLVFFEELPFIV 210 +ED A A + EL + G+++V F+++ F Sbjct: 181 VVDEDQPAPKKEGEEEGEEAAETETKSLAEAFYEELKNKADIGEIAGDAIVSFQDVFFTT 240 Query: 211 PRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTT 270 PRGRYD++++ + + GK+++YK+ + ++R+ LPK D+I+ +V+++DPP+RQG TT Sbjct: 241 PRGRYDIDIYENSIRLRGKTYEYKLQHNQIQRIVSLPKADDINHLVVLAMDPPLRQGQTT 300 Query: 271 YPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHA 330 YP LVLQ ++ D+E EV LN+ +E +++Y DKL + + V++ VL+ L + + Sbjct: 301 YPFLVLQFQK-DEETEVQLNLSDQEYEEKYKDKLKKQYDSKTHIVISHVLKGLTGRRVVV 359 Query: 331 PKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRL----EM 386 P + + A+ + AN+GYLYPL+N FFF+ KP Y+ + DV V R Sbjct: 360 PGEYKSKYEQCAVSCSYKANEGYLYPLDNAFFFLTKPTLYIPFNDVSSVVISRAGQTSTS 419 Query: 387 DRRFDLQVVML-NGSTLLFTNLERSEFSTLYQFLESKQVRMVGIPPALLRGATTGKTSMR 445 R FDL+V++ N + +F N+ + E L FL+SK +R+ K + Sbjct: 420 SRTFDLEVILRSNRGSTIFGNISKEEQQLLENFLKSKNLRV--------------KNEEK 465 Query: 446 AAAVRAEMAIAA---EEAARREADGEDDEEADDQDTKYDGKRDPQTFDDEDDEEDEDF 500 A VR + A+ + +E + GEDDE D+ G D+DDE E+F Sbjct: 466 DAQVRLQSALGSDSDDEDVNMGSAGEDDESVDEDFHVSSG--------DDDDEVAEEF 515
emb|CAA86251.1| unnamed protein product [Saccharomyces cerevisiae] ref|NP_013642.1| Pob3p [Saccharomyces cerevisiae] pir||S48328 hypothetical protein YML069w - yeast (Saccharomyces cerevisiae) sp|Q04636|YMG9_YEAST Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic region (552 aa) Score: 228 bits (580), Expect: 5.57909e-58 Length: 571, Idn/Pos/Gap = 168/280/89 (29%/49%/15%) Query: 8 DPVYVTDQSLGPGSLRLSKAGLLWSPRNEGLYTISVARE-------DLASLRWFRGARGD 60 D +Y+ +QS G R++ +GL W G + AR+ +L++++W RG RG Sbjct: 6 DRIYL-NQSKFSGRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRGCRGY 64 Query: 61 QLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGES 120 L+ K+ + +GF D ++ + V + E + GWN+G+ + Sbjct: 65 DLKINTKNQGVIQLDGFSQDDYNLIKNDFHRRF--NIQVEQREHSLRGWNWGKTDLARNE 122 Query: 121 VLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGK-TDECLVEMRFQ------- 172 ++F + FE+P + I+ + +NE+ +EF++ D + + LVEMRF Sbjct: 123 MVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQT 182 Query: 173 ----------------APTEED----------------AIALHAELSARVGSASFMGESL 200 P +ED A A + EL + G+++ Sbjct: 183 NVDENMTKKEESSNEVVPKKEDGAEGEDVQMAVEEKSMAEAFYEELKEKADIGEVAGDAI 242 Query: 201 VFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISL 260 V F+++ F PRGRYD++++ + + GK+++YK+ ++ ++R+ LPK D+IH LV+++ Sbjct: 243 VSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAI 302 Query: 261 DPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVL 320 +PP+RQG TTYP LVLQ ++ D+E EV LN++ E+ ++ Y DKL + + V++ VL Sbjct: 303 EPPLRQGQTTYPFLVLQFQK-DEETEVQLNLEDEDYEENYKDKLKKQYDAKTHIVLSHVL 361 Query: 321 RVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVE 380 + L D+ + P + + A+ + AN+GYLYPL+N FFF+ KP Y+ + DV V Sbjct: 362 KGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVN 421 Query: 381 FKRL----EMDRRFDLQVVML-NGSTLLFTNLERSEFSTLYQFLESKQVRMVGIPPALLR 435 R R FDL+VV+ N + F N+ + E L QFL+SK +R+ Sbjct: 422 ISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRV--------- 472 Query: 436 GATTGKTSMRAAAVRAEMAIAA---EEAARREADGEDDEEADDQDTKYDGKRDPQTFDDE 492 K R R + A+ + EE + GEDDE D+ D Q D Sbjct: 473 -----KNEDREVQERLQTALGSDSDEEDINMGSAGEDDESVDE---------DFQVSSDN 518 Query: 493 D-DEEDEDFAGDVEDESDGAPSDSDAARDDD 522 D DE E+F +SD A SD++ D++ Sbjct: 519 DADEVAEEF------DSDAALSDAEGGSDEE 543
ref|XP_322219.1| hypothetical protein [Neurospora crassa] gb|EAA26950.1| hypothetical protein [Neurospora crassa] (565 aa) Score: 227 bits (579), Expect: 6.75939e-58 Length: 554, Idn/Pos/Gap = 165/277/60 (29%/50%/10%) Query: 1 MSAAQVIDPVYVTDQSLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGD 60 M+A + D +Y+ D S G R ++ GL W P G ++ ++ +W R ARG Sbjct: 1 MAAIESFDNIYL-DLSKESGKSRFAENGLGWKPAGGG-EAFTLDSSNIGGAQWSRAARGY 58 Query: 61 QLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGES 120 +++ + V +GF D L + K W ++ + E + GWN+G+ Sbjct: 59 EVKILLRSSGVVQLDGFHQEDYERLSKIFKN-W-YSVNLENKEHSLRGWNWGKAEFSKAE 116 Query: 121 VLFVSGSETAFELPISDISQVVRSGRNELALEFHLDD---------TAGKTDEC------ 165 + F + AFE+P S+IS +GRNE+A+EF +D T GK + Sbjct: 117 LTFNVQNRPAFEIPYSEISNTNLAGRNEIAVEFAGNDGGKSNGHSGTGGKGKKASAGKDQ 176 Query: 166 LVEMRFQAP-------------------TEEDAIALHAEL---SARVGSASFMGESLVFF 203 LVE+RF P E++A+ L + A +G + G+++ F Sbjct: 177 LVEVRFYIPGTTTRKEAEGGEAGSDADEEEKNAVTLFYDTLIEKAEIGETA--GDTIATF 234 Query: 204 EELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPP 263 ++ + PRGR+D++++ + GK++DYKI Y +++ +LPKPD++H L I LDPP Sbjct: 235 LDVLHLTPRGRFDIDMYDASFRLRGKTYDYKIQYDAIKKFMVLPKPDDLHFLLCIGLDPP 294 Query: 264 IRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVL 323 +RQG T YP +V+Q + D+E+ + LN+ EEL +Y DKL L QVV + + L Sbjct: 295 LRQGQTRYPFVVMQFKA-DEEVTLDLNITEEELNGKYKDKLQSHYEQPLHQVVAYIFKGL 353 Query: 324 VDKPLHAP-KNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFK 382 +K + P K+F T + + ++ ++ A++G+LY LE F FV KP TY+ YE + F Sbjct: 354 ANKKVTTPAKDFTTHRQQYGIKCSIKASEGFLYCLEKAFMFVPKPATYISYEQTQSITFS 413 Query: 383 R----LEMDRRFDLQVVMLNGS-TLLFTNLERSEFSTLYQFLESKQVRMVGIPPALLRGA 437 R + FD+ V M NG+ + F+N+ R + L +F + K +R ++ Sbjct: 414 RVGGAVSALSTFDITVHMKNGAGSSQFSNINREDLKALEEFFKLKGLR--------VKNE 465 Query: 438 TTGKTSMRAAAV-RAEMAIAAEEAARREAD-GEDDEEADDQDTKYDGKRDPQTFDDEDDE 495 T++ AAA+ +MA + EEA +AD G DE+ + D + + + ++ D Sbjct: 466 IDDDTNLIAAALGDDDMASSDEEAVGPKADRGSADEDEESVDEDFQAESESDVAEEYDSN 525 Query: 496 EDEDFAGDVEDESD 509 + D +G E + D Sbjct: 526 HESDGSGSEESDVD 539
gb|EAK90481.1| structure-specific recognition protein 1 (SSRP1) (recombination signal sequence recognition protein) [Cryptosporidium parvum] (523 aa) Score: 224 bits (570), Expect: 6.76135e-57 Length: 432, Idn/Pos/Gap = 128/235/24 (29%/54%/5%) Query: 20 GSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGD---QLRC-TRKDGSTVNFE 75 G + SK W R T E++ + W + + D QLR R+ ++F Sbjct: 22 GIFKASKELFGWKNRRTNA-TYHYKPEEVMGVEWIQTSCEDSSCQLRVFIREKKDCIHFT 80 Query: 76 GFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPI 135 GF+ D + ++ + + + + E G N+G + I +++ + + +P Sbjct: 81 GFKTEDYSVIKSHFETYYGIN--LETKELNTKGINWGDLTIHNDTICIGNEGKVMMYVPS 138 Query: 136 SDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPTEEDAIALHAELSAR------ 189 +I+Q+ ++EL LEF+ AG+ + L+E+R P +E+++ ++ SA Sbjct: 139 ININQIAMPSKSELVLEFNEGVNAGEDCDELMEIRLFVPNQENSLDGNSLSSAEKLRSDL 198 Query: 190 -----VGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMF 244 +GS+ M + + + ++ +VPRGRY++E+ L +HGKSFDY IL++++ R+F Sbjct: 199 LKLTGIGSSGSM-DKVCRWNDIHLLVPRGRYEIEVLVNCLKLHGKSFDYTILFQSISRLF 257 Query: 245 LLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDE-IEVALNMKPEELQKRYGDK 303 LLP+P + LV++L+ P+RQGNT YP +V+Q DE IE+ LN+ +E+Q+ G Sbjct: 258 LLPRPGTSLVNLVVALETPMRQGNTKYPFVVMQFDTQQDENIEMPLNLSEKEIQRFTG-- 315 Query: 304 LPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFF 363 L P ++G+ W +VT++L+ L + P +F ++ H +R + A DG LYPL F F Sbjct: 316 LSPIMTGKFWDIVTRILKSLTGHSIIVPGDFRSASMYHCIRCSYKAQDGLLYPLNRSFIF 375 Query: 364 VNKPPTYLRYEDVDFVEFKRL--EMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLES 421 + KP +R++D+ +EF R+ R F+L + + G FT+++++E++ L +FL+ Sbjct: 376 ITKPVILIRFDDILNIEFSRMGGNQTRFFELTITIRGGGDYSFTSIDKAEYNPLIKFLQE 435 Query: 422 KQVRMVGIPPAL 433 K +R+ + +L Sbjct: 436 KNIRIKNLQESL 447
gb|EAL36346.1| structure specific recognition protein [Cryptosporidium hominis] (514 aa) Score: 223 bits (568), Expect: 1.25367e-56 Length: 406, Idn/Pos/Gap = 123/228/23 (30%/56%/5%) Query: 46 EDLASLRWFRGARGD---QLRC-TRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPR 101 E++ + W + + D QLR R+ ++F GF+ D + ++ + + + + Sbjct: 38 EEVMGVEWIQTSCEDSSCQLRVFIREKFVCIHFTGFKTEDYSVIKSHFETYYGIN--LET 95 Query: 102 GEQGVVGWNFGQVRIEGESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGK 161 E G N+G + I +++ + + +P +I+Q+ ++EL LEF+ AG+ Sbjct: 96 KELNTKGINWGDLTIHNDTICIGNEGKVMMYVPSVNINQIAMPSKSELVLEFNEGVNAGE 155 Query: 162 TDECLVEMRFQAPTEEDAIALHAELSAR-----------VGSASFMGESLVFFEELPFIV 210 + L+E+R P +E+++ ++ SA +GS+ M + + + ++ +V Sbjct: 156 DCDELMEIRLFVPNQENSLDGNSLSSAEKLRSDLLKLTGIGSSGSM-DKVCRWNDIHLLV 214 Query: 211 PRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTT 270 PRGRY++E+ L +HGKSFDY IL++++ R+FLLP+P + LVI+L+ P+RQGNT Sbjct: 215 PRGRYEIEVLVNCLKLHGKSFDYTILFQSISRLFLLPRPGTSLVNLVIALETPMRQGNTK 274 Query: 271 YPHLVLQLRRDDDE-IEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLH 329 YP +V+Q DE IE+ LN+ +E+Q+ G L P ++G+ W +VT++L+ L + Sbjct: 275 YPFVVMQFDTQQDENIEMPLNLSEKEIQRFTG--LSPIMTGKFWDIVTRILKSLTGHSII 332 Query: 330 APKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRL--EMD 387 P +F ++ H +R + A DG LYPL F F+ KP +R++D+ +EF R+ Sbjct: 333 VPGDFRSASMYHCIRCSYKAQDGLLYPLNRSFIFITKPVILIRFDDILNIEFSRMGGNQT 392 Query: 388 RRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGIPPAL 433 R F+L + + G FT+++++E++ L +FL+ K +R+ + +L Sbjct: 393 RFFELTITIRGGGDYSFTSIDKAEYNPLIKFLQEKNIRIKNLQESL 438
emb|CAE64433.1| Hypothetical protein CBG09136 [Caenorhabditis briggsae] (696 aa) Score: 220 bits (560), Expect: 1.20279e-55 Length: 520, Idn/Pos/Gap = 150/264/29 (28%/50%/5%) Query: 10 VYVTDQSL-GPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKD 68 VY+ D L G+L+L+ L + G +++VA +D+ L+W + LR D Sbjct: 9 VYLEDMGLLALGTLKLTDKSLSFKSEKGG-RSVTVAGDDIDGLKWQKLGNKPGLRVGVND 67 Query: 69 GSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSE 128 G+ F G + AD L+++ W ++ + + + GW++GQ ++G ++ F + Sbjct: 68 GNVHRFGGLQDADLERLQKFTDAHW--SRPIEQSNLFIKGWSYGQAEVKGRNIEFSWEDK 125 Query: 129 TAFELPISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP----TEEDAIALHA 184 FE+P +++S V + +NE LEFH +D A L+EMRF P TEED + Sbjct: 126 PIFEIPCTNVSNVT-ANKNEAVLEFHQNDNA---QIALMEMRFHMPVDAETEEDVDKVEE 181 Query: 185 ELSARVGSASFMGES---LVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVR 241 A + A E+ +V ++ PRGRYD++++PT +++HGK++DYKI K++ Sbjct: 182 FKKAVLAYAGLEAETEQPIVLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPIKSIN 241 Query: 242 RMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYG 301 R+FL+P D + V+SL+PPIRQG T Y +L++ +D+++ E+ L++ E+L++ G Sbjct: 242 RLFLVPHKDGRSVFFVLSLNPPIRQGQTRYSYLIMDFPKDEEQ-ELELSLTDEQLEESNG 300 Query: 302 DKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCF 361 L + G +++ V+ V + + + + P F+ G A++ N G LYPLE F Sbjct: 301 -ALKRTMDGPIYKTVSVVFKAICNLKITEPGRFIGHSGTPAIQCTHRQNPGLLYPLEKGF 359 Query: 362 FFVNKPPTYLRYEDVDFVEFKRLE---MDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQF 418 F++KP YLRYEDV R + + R D +V M +G ++F +E+ E + L+ + Sbjct: 360 LFIHKPAMYLRYEDVSSCHLARSDGGTVTRTVDFEVDMKSGGPIIFNTMEKEENNKLFDY 419 Query: 419 LESKQVRMVGIPPALLRGATTGKTSMR--AAAVRAE-------MAIAAEEAARREADGED 469 L K +++ R A + + AAV+AE + + Sbjct: 420 LSKKNIKIRNPTRVDARAAESSDDEIDPYKAAVKAEGRKRDESDDDESTDEDYDLDKDLK 479 Query: 470 DEEADDQDTKYDGKRDPQTFDDEDDEEDEDFAGDVEDESD 509 D + ++D+ +P D E+D G+ E +S+ Sbjct: 480 DRKTKEKDSSEGSASEPDDEYDSGSEQDSSGTGESEPDSE 519
gb|AAA19061.1| Hmg protein 4 [Caenorhabditis elegans] sp|P41848|SSRP_CAEEL Probable structure-specific recognition protein 1 (SSRP1) (Recombination signal sequence recognition protein) ref|NP_498633.1| high Mobility Group protein (78.6 kD) (hmg-4) [Caenorhabditis elegans] (697 aa) Score: 219 bits (557), Expect: 2.19327e-55 Length: 428, Idn/Pos/Gap = 128/236/20 (29%/55%/4%) Query: 10 VYVTDQS-LGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKD 68 VYV D L G+L+L++ L + ++G +++V D+ L+W + LR D Sbjct: 9 VYVEDVGHLAFGTLKLTEKSLNFKG-DKGGKSVNVTGSDIDKLKWQKLGNKPGLRVGLND 67 Query: 69 GSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSE 128 G F GF+ D ++ + W ++ + + + GWN+GQ ++G++V F + Sbjct: 68 GGAHRFGGFKDTDLEKIQSFTSSNW--SQSIDQSNLFIKGWNYGQAEVKGKTVEFSWEDK 125 Query: 129 TAFELPISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP----TEEDAIALHA 184 FE+P +++S V+ + +NE LEFH +D + L+EMRF P EEDA + Sbjct: 126 PIFEIPCTNVSNVI-ANKNEAVLEFHQNDDSKVQ---LMEMRFHMPIDLENEEDADKVEE 181 Query: 185 ELSARVGSASFMGES---LVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVR 241 A + A E+ + ++ PRGRYD++++PT +++HGK++DYKI K++ Sbjct: 182 FKKAVLAYAGLEAETEQPICLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPIKSIN 241 Query: 242 RMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYG 301 R+FL+P D H+ V+SL+PPIRQG T Y +L+ + +D+++ ++ L + E+L+ G Sbjct: 242 RLFLVPHKDGRHVYFVLSLNPPIRQGQTRYSYLIFEFGKDEEQ-DLELALTDEQLESSNG 300 Query: 302 DKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCF 361 + L ++G +++ ++ + + + + + P F+ S G A++ N G LYP+E F Sbjct: 301 N-LRRDMTGPIYETISILFKSICNLKITVPGRFLGSSGTPAIQCTHRQNPGLLYPMEKGF 359 Query: 362 FFVNKPPTYLRYEDVDFVEFKRLE---MDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQF 418 F++KP Y+R+E++ F R + + R FD ++ + G L F +E+ E + L+ + Sbjct: 360 LFIHKPAMYIRFEEISSCHFARSDSGTVTRTFDFEIDLKYGGPLTFNAMEKEENNKLFDY 419 Query: 419 LESKQVRM 426 L K +++ Sbjct: 420 LNKKNIKI 427
gb|EAA57630.1| hypothetical protein AN6687.2 [Aspergillus nidulans FGSC A4] ref|XP_410824.1| hypothetical protein AN6687.2 [Aspergillus nidulans FGSC A4] (589 aa) Score: 219 bits (557), Expect: 2.24887e-55 Length: 576, Idn/Pos/Gap = 174/278/83 (30%/48%/14%) Query: 4 AQVIDPVYVTDQSLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLR 63 ++ D +Y+ D S PG +L++ GL W P G T ++ ++ + +W R A+G +L+ Sbjct: 7 SESFDNIYL-DLSNQPGKCKLAETGLGWRPSGGG-DTFTLDSSNIGAAQWSRAAKGYELK 64 Query: 64 CTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLF 123 + + +GF D L + K W + V E + GWN+G+ + F Sbjct: 65 ILSRSSGVIQLDGFDQEDFERLSKAFK-IW-YGINVESREHALRGWNWGKAEFTKAELAF 122 Query: 124 VSGSETAFELPISDISQVVRSGRNELALEFHLD------DTAGKT-----------DECL 166 + AFE+P S+IS +G+NE+A+E L AG T DE L Sbjct: 123 NVQNRPAFEVPYSEISNTNLAGKNEVAVELSLSVDPNGSKPAGSTKNRGRKAAAGPDE-L 181 Query: 167 VEMRFQAP-----TE----------------------EDAIALHAEL---SARVGSASFM 196 VEMRF P TE ++A L EL A +G + Sbjct: 182 VEMRFYIPGTAVKTENGIKGENADEKNGGEGEENGEEQNAANLFYELLMEKAEIGDVA-- 239 Query: 197 GESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLAL 256 G++ F ++ + PRGR+D++++ + + GK++DYKI Y ++++ FLLPK D+ H + Sbjct: 240 GDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLI 299 Query: 257 VISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVV 316 V+ L+PP+RQG T YP LV+QL+ D+EI + LNM E L+ RY DKL P+ + QV+ Sbjct: 300 VLGLEPPLRQGQTRYPFLVMQLKL-DEEISLELNMTEELLETRYKDKLEPRYEEPIHQVI 358 Query: 317 TKVLRVLVDKPLHAP-KNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYED 375 TK+ R L K + P K+FV+ G ++ ++ AN+G LY L+ FV KP TY++ E+ Sbjct: 359 TKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQMEN 418 Query: 376 VDFVEFKR----LEMDRRFDLQVVMLNG-STLLFTNLERSEFSTLYQFLESKQVRMVGIP 430 V V R + R FD+ V + G F+N+ R E L +F ++K +R Sbjct: 419 VAVVTMSRVGGAISASRTFDITVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIR----- 473 Query: 431 PALLRGATTGKTSMRAAAV--RAEMAIAAEEAARREADGEDDEEADDQDTKYDGKRDPQT 488 ++ + T+ AA +M + E+ R G DE+ + D + Sbjct: 474 ---IKNEMSDDTNALIAAALDNDDMMSSDEDGGGRPDRGSADEDEESVDEDFQA------ 524 Query: 489 FDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDDDD 524 + D D A + + + + S SDA DD D Sbjct: 525 ------DSDSDVAEEYDSAHESSGSGSDAEMDDASD 554
emb|CAH02145.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140] ref|XP_451752.1| unnamed protein product [Kluyveromyces lactis] (555 aa) Score: 216 bits (551), Expect: 1.16365e-54 Length: 573, Idn/Pos/Gap = 157/274/91 (27%/47%/15%) Query: 8 DPVYVTDQSLGPGSLRLSKAGLLW-------SPRNEGLYTISVAREDLASLRWFRGARGD 60 D +Y LG G RL++ GL W S + + +A ++++S++W RG RG Sbjct: 6 DRIYYNQSKLG-GRFRLAEGGLGWKASATGGSASTQNNEPLLLAADEVSSVQWSRGCRGY 64 Query: 61 QLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGES 120 +L+ + K+ + +GF+ D L+ + + + E + GWN+G++ + Sbjct: 65 ELKISTKNKGLIQMDGFQQEDFNLLKNDFQRRF--NMQLEHREHSLRGWNWGKLDLARNE 122 Query: 121 VLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTA-GKTDECLVEMRFQAP----- 174 ++F + FE+P + I+ + +NE+ALEF + A + LVEMR P Sbjct: 123 MVFSLNGKPTFEIPYTHINNTNLTAKNEIALEFDTQNEAYNPAGDELVEMRLYVPGTVEE 182 Query: 175 ----------------------------------TEEDAIA--LHAELSARVGSASFMGE 198 EE +A + EL ++ G+ Sbjct: 183 NEDQDQIMVKDEAEAEDGVKSEVKTEEGSEEPDVQEEKTLAEYFYEELRSKADIGEISGD 242 Query: 199 SLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVI 258 +++ F++L F PRGRYD++++ + + GK+++YK+ ++ + R+F LPK D+IH +V+ Sbjct: 243 AIISFQDLFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIHYLMVL 302 Query: 259 SLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTK 318 S+DPPIRQG T+YP LVLQ ++ D+E EV LN++ +E +K Y DKL + + V++ Sbjct: 303 SIDPPIRQGQTSYPFLVLQFQK-DEETEVQLNVEDDEFEKLYKDKLKKQYDAKTHIVLSH 361 Query: 319 VLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDF 378 VL+ L + + P + + A+ + N+G+LYPL+N F F+ KP Y+ ++D+ Sbjct: 362 VLKGLTGRRVIVPGEYKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDIAA 421 Query: 379 VEFKRLEMD----RRFDLQVVM-LNGSTLLFTNLERSEFSTLYQFLESKQVRMVGIPPAL 433 V R R FDL+VVM N T F N+ + E L FL SK +R+ Sbjct: 422 VNISRAGQTSTSARTFDLEVVMRANRGTTTFANISKEEQQLLETFLRSKNLRV------- 474 Query: 434 LRGATTGKTSMRAAAVRAEMAIAAEEAARRE-----ADGEDDEEADDQDTKYDGKRDPQT 488 K + A R + A ++ + GED+E D+ Sbjct: 475 -------KNEDKEAEQRLQTAFGSDSDDDDVDINMGSAGEDEESVDE------------- 514 Query: 489 FDDEDDEEDEDFAGDVEDESDGAPSDSDAARDD 521 D +ED+D A + + E+ + S+ + ++ + Sbjct: 515 -DFHASDEDDDVAEEFDSEASASDSEGETSKSE 546
gb|AAC24268.1| Hmg protein 3 [Caenorhabditis elegans] ref|NP_491688.1| high Mobility Group protein (hmg-3) [Caenorhabditis elegans] pir||T34025 hypothetical protein C32F10.5 - Caenorhabditis elegans (689 aa) Score: 212 bits (540), Expect: 2.36569e-53 Length: 547, Idn/Pos/Gap = 151/278/46 (27%/50%/8%) Query: 10 VYVTD-QSLGPGSLRLSKAGLLWSPRNEGLYTISVAREDLASLRWFRGARGDQLRCTRKD 68 VYV D L G+L L++ + + ++G ++ + D+ L+W + LR D Sbjct: 9 VYVEDIGHLTCGTLTLTENSINFIG-DKGGKSVYITGTDVDKLKWQKLGNKPGLRVGLSD 67 Query: 69 GSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSE 128 G F GF D ++ + W +K + + + GWN+GQ ++G+++ F +E Sbjct: 68 GGAHRFGGFLDDDLQKIQSFTSSNW--SKSINQSNLFINGWNYGQADVKGKNIEFSWENE 125 Query: 129 TAFELPISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAPT----EEDAIALHA 184 FE+P +++S V+ + +NE LEFH ++ ++ L+EMRF P EED + Sbjct: 126 PIFEIPCTNVSNVI-ANKNEAILEFHQNE---QSKVQLMEMRFHMPVDLENEEDTDKVEE 181 Query: 185 ELSARVGSASFMGES---LVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVR 241 A + A E+ + ++ PRGRYD++++PT +++HGK++DYKI KT+ Sbjct: 182 FKKAVLAYAGLEAETEQPICLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKTIN 241 Query: 242 RMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYG 301 R+FL+P D + V+SL+PPIRQG T Y +L+ + +D++E ++ L++ E+L G Sbjct: 242 RLFLVPHKDGRQVYFVLSLNPPIRQGQTHYSYLIFEFGKDEEE-DLELSLTDEQLDYFNG 300 Query: 302 DKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCF 361 + L +++G +++ ++ + + + + + P F+ S G A++ N G LYP+E F Sbjct: 301 N-LQREMTGPIYETISILFKSICNLKVTVPGRFLGSSGTPAIQCTHRQNLGLLYPMEKGF 359 Query: 362 FFVNKPPTYLRYEDVDFVEFKRLE---MDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQF 418 F+ KP Y+R+E++ F R + + R FD ++ + GS+L F+ +++ E + L+ + Sbjct: 360 LFIQKPVMYIRFEEISSCHFARSDSGTVTRTFDFEIDLKTGSSLTFSAMDKEENNKLFDY 419 Query: 419 LESKQVRMVGIPPALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDT 478 L K+++ +R I + A +D EDD + Sbjct: 420 LNKKEIK-----------------------IRNSHRIDNKSAGYGSSD-EDDIDPYKSTV 455 Query: 479 KYDGKRDPQTFDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDDDDDDDDDDDDDDEALE 538 K +G+ DDE +ED D D++ + + DS + DD+ D + D + Sbjct: 456 KAEGREQDDDSDDESTDEDYDLDKDMKKQKND--KDSSEGSGSEPDDEYDSGSEKDASGT 513 Query: 539 AELEPEE 545 E +P+E Sbjct: 514 GESDPDE 520
emb|CAG81462.1| unnamed protein product [Yarrowia lipolytica CLIB99] ref|XP_503258.1| hypothetical protein [Yarrowia lipolytica] (544 aa) Score: 205 bits (521), Expect: 3.27742e-51 Length: 584, Idn/Pos/Gap = 162/274/102 (27%/46%/17%) Query: 8 DPVYVTDQSLGPGSLRLSKAGLLW----------SPRNEGLYTISVAREDLASLRWFRGA 57 D +Y+ +QS G LR+ + GL W S + + +E+L + W RG+ Sbjct: 7 DGIYL-NQSKAHGRLRMVETGLGWKAVQKTSMGGSKETKKDEPFLLGKEELLAAFWSRGS 65 Query: 58 RGDQLRCTRKDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIE 117 RG +++ K+ NF+GF + L+ +K + + V + E V GWN+G+ E Sbjct: 66 RGFEMKIQTKNRGAANFDGFEQDNLEELKNVMKRNYGIS--VEQREHSVKGWNWGKTDFE 123 Query: 118 GESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRFQAP--- 174 ++F ++ AFE+P ++++ G+NE+ALEF G+ + LVEMRF P Sbjct: 124 RSELVFSVANKPAFEIPYAEVANSNLVGKNEVALEFQ-QPADGRAGDELVEMRFYVPGVT 182 Query: 175 -------------------------------------TEEDAIALHAELSARVGSASFMG 197 + A + L + + G Sbjct: 183 SVEGDENPKKKQKTEKEGEEGKEGDDDADADDESEEEVQSTAQIFYDTLKEKADIGAVAG 242 Query: 198 ESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALV 257 ++V E+ ++PRGRYD++++ ++ + GK++DY + YK V+R+ +LPKPD++H LV Sbjct: 243 TAVVSLSEIYLVIPRGRYDIDMYANFMRLRGKTYDYMVQYKHVQRLIVLPKPDDLHNILV 302 Query: 258 ISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDK-LPPKISGELWQVV 316 + LDPP+RQG T YP LV+Q R+ EI+V LN+ E ++Y DK L QVV Sbjct: 303 VQLDPPLRQGQTRYPFLVMQFLREA-EIKVELNVDDAEFAEKYADKGLKQSYDESAHQVV 361 Query: 317 TKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDV 376 + R L + L P +F T G + +L A++G+LYPLE F F++KP ++ + ++ Sbjct: 362 GSIFRGLTGRKLTVPGSFKTVHGHAGVSCSLKASEGHLYPLERNFLFLSKP-VFIPFAEI 420 Query: 377 DFVEFKRL----EMDRRFDLQVVMLNGS-TLLFTNLERSEFSTLYQFLESKQVRMVGIPP 431 + R+ R FD+ + + N F+N+ + E L F++SK +R+ Sbjct: 421 QDITLSRVGSSVTTSRTFDMTLKLRNAQGEYQFSNISKEEQEGLEAFIKSKGIRL----- 475 Query: 432 ALLRGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGKRDPQTFDD 491 + +A E+A E D+++DD G + D+ Sbjct: 476 --------------------KNDLAEEKALLAATLAEVDDDSDD------GGEFRGSADE 509 Query: 492 EDDEEDEDFAGDVEDESDGAPSDSDAARDDDDDDDDDDDDDDDE 535 +D+ DEDF A SDS+ A + D + + ++DDE Sbjct: 510 DDESPDEDFH---------AESDSEVAEEFDSNAESSSGEEDDE 544
sp|Q04931|SSRP_RAT Structure-specific recognition protein 1 (SSRP1) (Recombination signal sequence recognition protein) (T160) gb|AAA40927.1| HMG box (bp. 1168..1428) (561 aa) Score: 202 bits (515), Expect: 1.87445e-50 Length: 339, Idn/Pos/Gap = 121/194/21 (35%/57%/6%) Query: 152 EFHLDDTAGKTDECLVEMRFQAP-TEEDAI----ALHAELSARVGSASFMGESLVFFEEL 206 EFH +D A + L+E+RF P T+ED + A + ++ G+++ F EL Sbjct: 1 EFHQNDDA---EVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKADVIQATGDAICIFREL 57 Query: 207 PFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQ 266 + PRGRYD+ ++PT+L +HGK+FDYKI Y TV R+FLLP D+ + VISLDPPI+Q Sbjct: 58 QCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQ 117 Query: 267 GNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDK 326 G T Y L+L +D+D I + LNM EE++KR+ +L +SG L+++V++V++ LV++ Sbjct: 118 GQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNR 176 Query: 327 PLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR-LE 385 + P NF GA + + A+ G LYPLE F +V+KPP ++R++++ FV F R Sbjct: 177 KITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARATT 236 Query: 386 MDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMV------GIPPALLRGATT 439 R FD ++ G+ F+++ER E+ L+ F+ +K++ + GI P A + Sbjct: 237 TTRSFDSEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGINPGYDDYADS 296 Query: 440 GKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDT 478 + A R + EE RE + D + ++T Sbjct: 297 DEDQHDAYLERMK-----EEGKIREENANDSSDDSGEET 330
ref|NP_702282.1| structure specific recognition protein, putative [Plasmodium falciparum 3D7] gb|AAN37006.1| structure specific recognition protein, putative [Plasmodium falciparum 3D7] (506 aa) Score: 199 bits (507), Expect: 1.69635e-49 Length: 328, Idn/Pos/Gap = 108/185/14 (32%/56%/4%) Query: 108 GWNFGQVRIEGESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDE-CL 166 GWN+G+ ++E ++ F ++ AF LP ++I+Q+ + ++A+EF D+ K +E L Sbjct: 117 GWNWGEFKLENSNLCFDIDNKYAFNLPTNNINQLNVQIKTDIAMEFKNDENNNKGNEDFL 176 Query: 167 VEMRFQAPTEEDAIA----LHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPT 222 E+RF P E D L +L +V ES+ +P +VPRGRYD+E++ + Sbjct: 177 AEIRFYYPHENDENQNFQNLKNDLLEKVNIGDTKSESIASLSNIPLLVPRGRYDIEMYSS 236 Query: 223 YLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDD 282 +HGKS+D+ I Y + +M L+PK + L+ SL ++QG T YP +++QL DD Sbjct: 237 TFKLHGKSYDFNIQYTNINKMILVPKSNSNQYVLIFSLSNKMKQGQTEYPFILIQLNNDD 296 Query: 283 D-EIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAH 341 D E++++ + +E+ +Y KL ISG+ VVTK+ LV+K + P ++ TS+ H Sbjct: 297 DMELDISAS---DEVMTKY--KLEKTISGKAHDVVTKLFTALVNKNVIVPGDYRTSKNQH 351 Query: 342 ALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR---LEMDRRFDLQVVMLN 398 + + A G LYPL F F+ KP + ++D+ + F+R + R F L + Sbjct: 352 GITCSYRAASGQLYPLNKYFLFIVKPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHKR 411 Query: 399 GSTLLFTNLERSEFSTLYQFLESKQVRM 426 G + +TN+++SE++ L FL+SK + + Sbjct: 412 GMSYEYTNIDKSEYNPLLTFLKSKNINI 439
gb|EAL17792.1| hypothetical protein CNBL3050 [Cryptococcus neoformans var. neoformans B-3501A] gb|AAW45161.1| chromatin binding protein, putative [Cryptococcus neoformans var. neoformans JEC21] ref|XP_572468.1| chromatin binding protein, putative [Cryptococcus neoformans var. neoformans JEC21] (588 aa) Score: 192 bits (489), Expect: 1.65537e-47 Length: 448, Idn/Pos/Gap = 134/231/46 (29%/51%/10%) Query: 20 GSLRLSKAGLLWSP-RNEGLYTISVAREDLASLRWFRGARGDQLRCTRKDGST--VNFEG 76 G LR + G W ++E + D+ WFR AR QLR ++ ++F+G Sbjct: 18 GKLRFNPVGFGWKAYQSEDNNPTTYNGSDIRHATWFRVARHFQLRLGMRNSEKPRISFDG 77 Query: 77 FRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELPIS 136 F+ D ++ ++E + T + + + GWN+G+ +++G ++F +TAF++P+S Sbjct: 78 FKRDDLDKIKRTLQEYFNIT--LETRDTSLKGWNWGEAQVKGSDLVFQVQGKTAFDVPLS 135 Query: 137 DISQVVRSGRNELALEFHL--------DDTAGKTDECLVEMRFQAP-------------- 174 ++ +G+ E+ALEF+ D + + +VEMRF P Sbjct: 136 QVANSNIAGKYEVALEFNPPSNYKFDPKDLNKRPPDEMVEMRFYIPGKSMKKAGSDAGSG 195 Query: 175 ---TEED--------AIALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTY 223 TE D A A H+ + + + +G+S+V FE+ + PRGR+ +E++ Sbjct: 196 GEETELDEEGNEVSAADAFHSLIKEKADIGAVVGDSIVVFEDCLILTPRGRFSIEVYADS 255 Query: 224 LSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDD 283 + + GKS D+++ + ++ R+FLLPK D++H+ LV+ LDPPIRQG T YP LV Q + D+ Sbjct: 256 IRLVGKSTDHRVPFTSIHRIFLLPKLDDLHVQLVLGLDPPIRQGATRYPFLVAQWPK-DE 314 Query: 284 EIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHAL 343 + LN+ EEL + Y D L +QVV++VL+ L K + P + +QG + + Sbjct: 315 VVNAELNLTDEELAQ-YPD-LEKTYEATTFQVVSRVLKALTGKKVTPPGSLRNAQGLNGI 372 Query: 344 RTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR----LEMDRRFDLQVV-MLN 398 R + A G LY LE F++K P + + D + F R + R FD++VV Sbjct: 373 RANVKAVQGELYFLEKGLIFISKQPILIDFSKTDSISFSRVGGGVASARTFDMRVVSKTG 432 Query: 399 GSTLLFTNLERSEFSTLYQFLESKQVRM 426 G+ +F+ + + E + FL+SK +R+ Sbjct: 433 GADHVFSAINKQEVGPISSFLQSKNIRL 460
gb|EAA18148.1| putative structure specific recognition protein [Plasmodium yoelii yoelii] (493 aa) Score: 189 bits (481), Expect: 1.4131e-46 Length: 420, Idn/Pos/Gap = 117/214/21 (27%/50%/5%) Query: 20 GSLRLSKAGLLW-SPRNEGLYTISVAREDLASLRWFRGARGD---QLRCTR-KDGSTVNF 74 GS R+S L W + + +Y D++ W + + + L+ KD V F Sbjct: 30 GSFRMSNEFLGWKNKKTNSVYQYKC--NDISEGEWIKLSYNNNRLHLKFNESKDNLIVFF 87 Query: 75 EGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSGSETAFELP 134 +GF + A + ++ ++ + G + GWN+G+ ++E ++ F + AF + Sbjct: 88 DGFPDRNIAEITQHFQKYFNIKLGTRK--LATKGWNWGEFKLENSNLFFDIDKKYAFNIN 145 Query: 135 ISDISQVVRSGRNELALEFHLDDTAGKTDE-CLVEMRFQAPTEEDAIA----LHAELSAR 189 ++I+Q+ + ++A+E D+ T+E L E+RF P E D L L + Sbjct: 146 TNNINQLNVQIKTDIAIELKNDENKQNTNEDVLSEIRFYYPHENDENQNFQDLKNNLLEK 205 Query: 190 VGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVRRMFLLPKP 249 V E + +P +VPRGRY++E++ +HGKS+D+ + Y + +M L+PK Sbjct: 206 VNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGKSYDFTVQYSNINKMLLVPKT 265 Query: 250 DEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKIS 309 + L+ SL+ I+QG T YP +++QL DDD +++ +N E++Q KL ++ Sbjct: 266 NSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDD-MDLDINASEEDIQNY---KLEKTLT 321 Query: 310 GELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPT 369 G+ + VVT++ L K P ++ T++ H + + A G LYPL F FV KP Sbjct: 322 GKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYFLFVVKPVI 381 Query: 370 YLRYEDVDFVEFKR---LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 + ++D+ + F+R + R F L + G + +TN+++SE++ L +FL+SK + + Sbjct: 382 LISFDDIVTLSFQRTGNINQHRFFSLIIKHKRGISYEYTNIDKSEYAPLLEFLKSKNLNI 441
emb|CAI04722.1| structure specific recognition protein, putative [Plasmodium berghei] (493 aa) Score: 187 bits (476), Expect: 5.28091e-46 Length: 368, Idn/Pos/Gap = 106/195/14 (28%/52%/3%) Query: 67 KDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSG 126 KD V F+GF + + + ++ ++ + G + GWN+G+ ++E +++F Sbjct: 80 KDNLIVFFDGFPDRNLSEITQHFQKYFNIKLGTRK--LATKGWNWGEFKLENSNLIFDID 137 Query: 127 SETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDE-CLVEMRFQAPTEEDAIA---- 181 + AF + ++I+Q+ + ++A+E D+ T+E L E+RF P E D Sbjct: 138 KKYAFNINTNNINQLNVQIKTDIAIELKNDENKQNTNEDVLSEIRFYYPHENDENQNFQD 197 Query: 182 LHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVR 241 L L +V E + +P +VPRGRY++E++ +HGKS+D+ + Y + Sbjct: 198 LKNNLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGKSYDFTVQYSNIN 257 Query: 242 RMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYG 301 +M L+PK + L+ SL+ I+QG T YP +++QL DDD +++ +N E++Q Sbjct: 258 KMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDD-MDLDINASEEDIQNY-- 314 Query: 302 DKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCF 361 KL ++G+ + VVT++ L K P ++ T++ H + + A G LYPL F Sbjct: 315 -KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYF 373 Query: 362 FFVNKPPTYLRYEDVDFVEFKR---LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQF 418 FV KP + ++D+ + F+R + R F L + G + +TN+++SE++ L +F Sbjct: 374 LFVVKPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHKRGISYEYTNIDKSEYAPLLEF 433 Query: 419 LESKQVRM 426 L+SK + + Sbjct: 434 LKSKNLNI 441
emb|CAI02497.1| hypothetical protein PB300791.00.0 [Plasmodium berghei] (415 aa) Score: 169 bits (428), Expect: 2.20283e-40 Length: 322, Idn/Pos/Gap = 93/169/11 (28%/52%/3%) Query: 67 KDGSTVNFEGFRPADRATLEEYVKEAWAWTKGVPRGEQGVVGWNFGQVRIEGESVLFVSG 126 KD V F+GF + + + ++ ++ + G + GWN+G+ ++E +++F Sbjct: 80 KDNLIVFFDGFPDRNLSEITQHFQKYFNIKLGTRK--LATKGWNWGEFKLENSNLIFDID 137 Query: 127 SETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDE-CLVEMRFQAPTEEDAIA---- 181 + AF + ++I+Q+ + ++A+E D+ T+E L E+RF P E D Sbjct: 138 KKYAFNINTNNINQLNVQIKTDIAIELKNDENKQNTNEDVLSEIRFYYPHENDENQNFQD 197 Query: 182 LHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYKTVR 241 L L +V E + +P +VPRGRY++E++ +HGKS+D+ + Y + Sbjct: 198 LKNNLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGKSYDFTVQYSNIN 257 Query: 242 RMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYG 301 +M L+PK + L+ SL+ I+QG T YP +++QL DDD +++ +N E++Q Sbjct: 258 KMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDD-MDLDINASEEDIQNY-- 314 Query: 302 DKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCF 361 KL ++G+ + VVT++ L K P ++ T++ H + + A G LYPL F Sbjct: 315 -KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYF 373 Query: 362 FFVNKPPTYLRYEDVDFVEFKR 383 FV KP + ++D+ + F+R Sbjct: 374 LFVVKPVILISFDDIVTLSFQR 395
gb|AAB41544.1| structure-specific recognition protein 1 [Bos taurus] (460 aa) Score: 130 bits (326), Expect: 1.30678e-28 Length: 250, Idn/Pos/Gap = 83/136/27 (33%/54%/10%) Query: 256 LVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQV 315 VISLDPPI+QG T Y L+L +D+D I + LNM EE++KR+ +L +SG L+++ Sbjct: 6 FVISLDPPIKQGQTRYHFLILLFSKDED-ISLTLNMNEEEVEKRFEGRLTKNMSGSLYEM 64 Query: 316 VTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYED 375 V++V++ LV++ + P NF GA + + A+ G LYPLE F +V+KPP ++R+++ Sbjct: 65 VSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDE 124 Query: 376 VDFVEFKR-LEMDRRFDLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRMVGIPPALL 434 + FV F R R FD ++ G+ F+++ER E+ L+ F+ +K Sbjct: 125 ISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAK------------ 172 Query: 435 RGATTGKTSMRAAAVRAEMAIAAEEAARREADGEDDEEADDQDTKYDGK-RDPQTFDDED 493 K +++ ++ M + +E A + ED +A + K +GK R+ D D Sbjct: 173 ------KLNIKNRGLKEGMNPSYDEYADSD---EDQHDAYLERMKEEGKIREENANDSSD 223 Query: 494 D---EEDEDF 500 D E DE F Sbjct: 224 DSGEETDESF 233
emb|CAH76375.1| structure specific recognition protein, putative [Plasmodium chabaudi] (273 aa) Score: 126 bits (317), Expect: 1.79485e-27 Length: 241, Idn/Pos/Gap = 74/132/9 (30%/54%/3%) Query: 108 GWNFGQVRIEGESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDE-CL 166 GWN+G+ ++E +++F + AF + ++I+Q+ + ++A+E D+ T+E L Sbjct: 32 GWNWGEFKLENSNLIFDIDKKYAFNINTNNINQLNVQIKTDIAIELKNDENKQNTNEDVL 91 Query: 167 VEMRFQAPTEEDAIA----LHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPT 222 E+RF P E D L L +V E + +P +VPRGRY++EL+ Sbjct: 92 SEIRFYYPHENDENQNFQDLKNNLLDKVNIGDSKSECIASLSNIPLLVPRGRYEIELYSK 151 Query: 223 YLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDD 282 +HGKS+D+ + Y + +M L+PK + L+ SL+ I+QG T YP +++Q +D Sbjct: 152 TFKLHGKSYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQ-LNND 210 Query: 283 DEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHA 342 D++++ +N PEE K Y KL ++G+ + VVT++ L K P ++ T++ H Sbjct: 211 DDMDLDIN-APEEDIKNY--KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHG 267 Query: 343 L 343 + Sbjct: 268 I 268
gb|EAL46446.1| structure specific recognition protein, putative [Entamoeba histolytica HM-1:IMSS] (376 aa) Score: 120 bits (302), Expect: 9.21271e-26 Length: 337, Idn/Pos/Gap = 90/177/26 (26%/52%/7%) Query: 103 EQGVVGWNFGQVRIEGESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGKT 162 E V G+N+G++ I+ SV F++ D ++ S + E+++EF DD+ K Sbjct: 5 EYCVSGFNWGRIDIDKNSVQLTHDGYLIFKMNPKDFTKSSISNKTEVSIEF--DDS--KD 60 Query: 163 DECLVEMRFQAPTEE------DAIALHAELSARVGSASFMGESLVFFEELPFIVPRGRYD 216 + L E++F AP E +A L+ ++ A V + G+ + FE + F+ P+G YD Sbjct: 61 GDALSEIKFFAPQTEQQNDKDNATELYDKI-AEVTPTNAAGKEVCLFENIGFLSPKGHYD 119 Query: 217 LELFPTYLSMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVL 276 ++++ + + K++D+KI YK + R + L K DE +++L P+++G + Y LV+ Sbjct: 120 VKIYEDSVRVQNKTYDFKINYKDIARYYKLRK-DEDTSFFILNLSNPLKKGKSVYECLVM 178 Query: 277 QLRRDDDEIEVALNMKPEELQKRYGDK--LPPKISGELWQVVTKVLRVLVDKPLHAPKNF 334 +L ++E+ L+ L K + DK L ++ + ++ R L + P+ + + Sbjct: 179 EL-SSNEEVTAELH-----LTKEFEDKTGLEESMTDNELDLFVELFRSLCNVPIISSGHK 232 Query: 335 VTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEM---DRRFD 391 + +H L+ L N+G+L+P+ + F FV K + ++D+ V+ R+ ++ FD Sbjct: 233 FKTNDSHFLKCNLSTNEGFLFPMSDSFIFVFKRIRIIMFKDIKSVDILRMNASNDNKTFD 292 Query: 392 LQVVMLNG--STLLFTNLERSEFSTLYQFLESKQVRM 426 V+ L G +L FT + R+E+ L +L+ Q+++ Sbjct: 293 F-VINLKGRRGSLQFTGMNRNEYENLVGYLKESQLKL 328
emb|CAD25634.1| STRUCTURE-SPECIFIC RECOGNITION PROTEIN [Encephalitozoon cuniculi GB-M1] ref|NP_586030.1| STRUCTURE-SPECIFIC RECOGNITION PROTEIN [Encephalitozoon cuniculi GB-M1] (425 aa) Score: 119 bits (299), Expect: 2.1044e-25 Length: 321, Idn/Pos/Gap = 93/157/43 (28%/48%/13%) Query: 112 GQVRIEGESVLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGKTDECLVEMRF 171 G++ I G+ L ++T FE+P+ DI VV RNEL++ L +M Sbjct: 105 GELGINGQKALEFRNTKTIFEIPVDDIESVVDI-RNELSVS-------------LRDMEI 150 Query: 172 QAPTEEDAIALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSF 231 + ++ I + G +S + + ++ E L PRG+++ F YL + G S+ Sbjct: 151 RFVSDRKTIE-----EIKGGCSSSVDDEILKMEGLSLAYPRGKFNFIFFRDYLRLVGSSY 205 Query: 232 DYKILYKTVRRMFLLPKP--DEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVAL 289 D+KI YK+++ +++L K + +VI DPPIRQG T Y H+V+ D++E L Sbjct: 206 DHKIYYKSIKMLYVLEKGYIRDGERYVVIGADPPIRQGQTRYDHVVVAF----DDVEREL 261 Query: 290 NMKPEELQKRYGDKLPPKISGELWQVVTKVLRVL-VDKPLHAPKNFVTSQGAHALRTALG 348 ++ E L+ Y SG L ++ +V+ L V K + + +F + G LR A+ Sbjct: 262 SVSDERLKGEY--------SGLLSEIFAEVMEALCVIKAVRS--SFESRDGMRCLRCAMK 311 Query: 349 ANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEMD----RRFDLQVVMLNGSTLLF 404 A +G LYPL++C F+ K L ++ VEF R+ + + FD+ + T F Sbjct: 312 AYEGQLYPLDDCMLFLPK-AVRLDLGEISLVEFSRINLSSMQAKTFDMTLFCEGPYT--F 368 Query: 405 TNLERSEFSTLYQFLESKQVR 425 L + EF L Q+ K ++ Sbjct: 369 NGLSKDEFGALEQYFHGKGIK 389
emb|CAC08510.1| SSRP1-like protein [Zygosaccharomyces rouxii] (542 aa) Score: 117 bits (292), Expect: 1.24441e-24 Length: 253, Idn/Pos/Gap = 75/132/9 (29%/52%/3%) Query: 179 AIALHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYLSMHGKSFDYKILYK 238 A A H EL + G+S+V F+++ F PRGRYD++++ + + GK+++YK+ ++ Sbjct: 275 AEAFHEELKEKADIGEVSGDSIVSFQDVFFATPRGRYDIDIYKNSIRLRGKTYEYKLQHR 334 Query: 239 TVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVALNMKPEELQK 298 + + LPK + + +I + TT P + Q DE + ++++ E+ + Sbjct: 335 QIPKDRSLPKAMILPSSGLIHRTTITQGQTTTLPCITFQ----KDERQRCIDLEDEDFEA 390 Query: 299 RYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGANDGYLYPLE 358 Y D+L + + VV+ VL+ L + + P + + A+ + AN+GYLYPL+ Sbjct: 391 NYKDRLKREYDAKTHIVVSHVLKGLTGRRVMVPGEYKSKYDQCAVSCSYKANEGYLYPLD 450 Query: 359 NCFFFVNKPPTYLRYEDVDFVEFKRL----EMDRRFDLQVVML-NGSTLLFTNLERSEFS 413 N FFF+ KP Y+ + DV V R R FDL+V + N + F N+ + E Sbjct: 451 NAFFFLTKPTLYIPFMDVSSVNISRAGQASTSSRTFDLEVTLRGNRGSTTFANISKEEQQ 510 Query: 414 TLYQFLESKQVRM 426 L QFL+S+ +R+ Sbjct: 511 LLEQFLKSRNLRV 523
emb|CAH84175.1| hypothetical protein PC300891.00.0 [Plasmodium chabaudi] (202 aa) Score: 116 bits (291), Expect: 1.52031e-24 Length: 203, Idn/Pos/Gap = 68/108/8 (33%/53%/3%) Query: 169 MRFQAPTEEDAIA----LHAELSARVGSASFMGESLVFFEELPFIVPRGRYDLELFPTYL 224 +RF P E D L L +V E + +P +VPRGRY++EL+ Sbjct: 1 IRFYYPHENDENQNFQDLKNNLLDKVNIGDSKSECIASLSNIPLLVPRGRYEIELYSKTF 60 Query: 225 SMHGKSFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDE 284 +HGKS+D+ + Y + +M L+PK + L+ SL+ I+QG T YP +++Q +DD+ Sbjct: 61 KLHGKSYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQ-LNNDDD 119 Query: 285 IEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALR 344 +++ +N PEE K Y KL ++G+ + VVT++ L K P ++ T++ H + Sbjct: 120 MDLDIN-APEEDIKNY--KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGIT 176 Query: 345 TALGANDGYLYPLENCFFFVNKP 367 + A G LYPL F FV KP Sbjct: 177 CSYRAASGQLYPLNKYFLFVVKP 199
gb|EAA57453.1| hypothetical protein MG10128.4 [Magnaporthe grisea 70-15] ref|XP_365908.1| hypothetical protein MG10128.4 [Magnaporthe grisea 70-15] (261 aa) Score: 95 bits (235), Expect: 4.6199e-18 Length: 156, Idn/Pos/Gap = 57/89/6 (36%/57%/3%) Query: 276 LQLRRDDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAP-KNF 334 +Q +RD+ E+ + LN+ EEL +Y DKL L QVVT + R L +K + AP K+F Sbjct: 1 MQFKRDE-EVTLDLNLAEEELNGKYKDKLQGHYEQPLHQVVTYIFRGLANKKITAPAKSF 59 Query: 335 VTSQGAHALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR----LEMDRRF 390 T +G ++ A+ A++G+LY LE F FV KP TY+ YE V F R + + F Sbjct: 60 QTHRGQLGIKCAIKASEGFLYCLEKAFMFVPKPATYISYEQTQSVTFSRVGGAVSATQTF 119 Query: 391 DLQVVMLNGSTLLFTNLERSEFSTLYQFLESKQVRM 426 D+ + M G + F+N+ R + L F ++K++R+ Sbjct: 120 DITIHMKGGGSSQFSNINREDLKALETFFQAKELRV 155
gb|EAA18768.1| structure-specific recognition protein 1 [Plasmodium yoelii yoelii] (198 aa) Score: 78 bits (192), Expect: 5.69971e-13 Length: 149, Idn/Pos/Gap = 43/82/6 (28%/55%/4%) Query: 281 DDDEIEVALNMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGA 340 +DD++++ +N E++Q KL ++G+ + VVT++ L K P ++ T++ Sbjct: 1 NDDDMDLDINASEEDIQNY---KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNE 57 Query: 341 HALRTALGANDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKR---LEMDRRFDLQVVML 397 H + + A G LYPL F FV KP + ++D+ + F+R + R F L + Sbjct: 58 HGITCSYRAASGQLYPLNKYFLFVVKPVILISFDDIVTLSFQRTGNINQHRFFSLIIKHK 117 Query: 398 NGSTLLFTNLERSEFSTLYQFLESKQVRM 426 G + +TN+++SE++ L +FL+SK + + Sbjct: 118 RGISYEYTNIDKSEYAPLLEFLKSKNLNI 146
ref|YP_209549.1| RNA polymerase beta' subunit-2 [Huperzia lucidula] gb|AAT80745.1| RNA polymerase beta' subunit-2 [Huperzia lucidula] (1788 aa) Score: 52 bits (124), Expect: 3.95749e-05 Length: 130, Idn/Pos/Gap = 37/57/4 (28%/43%/3%) Query: 450 RAEMAIAAEEAARREADGED--DEEADDQDTKYDGKRDPQTFDDE-DDEEDEDFAGDVED 506 R + EE E GE+ DEE D++T + D +T D+E DEE D E+ Sbjct: 1604 RELSSFPTEETIGGETIGEETSDEETSDEETSDEETSDEETSDEETSDEETSDEETSDEE 1663 Query: 507 ESDGAPSDSDAARDDDDDDDDDDDDDDDEALEAELEPEEPLEQVTEEDQSQGDPESTSAA 566 SD SD + + ++ D + D++ DE E E + + T E + E+ A Sbjct: 1664 TSDKETSDEETSDEETSDKETSDEETSDEETIGE-TTREAIREATRETAGEATGETVGGA 1722 Query: 567 AAAETGHATD 576 G AT+ Sbjct: 1723 TEETVGEATE 1732
ref|NP_700792.1| hypothetical protein PF10_0319 [Plasmodium falciparum 3D7] gb|AAN35516.1| hypothetical protein [Plasmodium falciparum 3D7] (553 aa) Score: 50 bits (120), Expect: 0.000104175 Length: 97, Idn/Pos/Gap = 31/55/4 (31%/56%/4%) Query: 461 ARREADGEDDEEADDQDTKYDGKRDPQTFDDE--DDEEDEDFAGDVEDESDGAPSDSDAA 518 A + D ++D+E +D + D K D + +DE DDE+++D D E D +D Sbjct: 210 AEQINDEKNDDEKNDDEKNDDEKNDAEQINDEKNDDEKNDDEKNDDEKNDDEKINDEKND 269 Query: 519 RDDDDDDDDDDDDDDDEALEAELEPEEPL--EQVTEE 553 + +DD+ +DD+ +DDE ++AE +E + EQ+ +E Sbjct: 270 DEKNDDEKNDDEKNDDEKIDAEQINDEQINAEQINDE 306
gb|AAC17540.2| Hypothetical protein F55F10.1 [Caenorhabditis elegans] ref|NP_500551.2| protein conserved (4F151) [Caenorhabditis elegans] (4368 aa) Score: 45 bits (106), Expect: 0.00487823 Length: 96, Idn/Pos/Gap = 27/47/5 (28%/48%/5%) Query: 466 DGEDDEEADDQDTKYDGKRDPQTFDDEDDEEDEDFAGDVEDESDGAPSDSDAARDDDDDD 525 D +D E ++ + +G D Q D E+ E D ++ E D A D +++ D Sbjct: 3629 DAKDVTEEMEETGQIEGLEDEQPVDSEEHEAKNDNEKPIDMEDDFAEDLQDIDKNEKGDQ 3688 Query: 526 DDDDDDDDDEALEAELEPEEPLEQVTEEDQSQGDPE 561 +D +D+ D+E + E+ + V EED+ Q DP+ Sbjct: 3689 NDGEDESDEEP-----DVEDQMGDVEEEDEKQLDPK 3719