Cyanidioschyzon merolae Genome Project

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CMS416C (715 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)

		unnamed protein product [Candida glabrata CBS138]
		SPAC1F7.02c [Schizosaccharomyces pombe]
		RNA helicase [Saccharomyces cerevisiae]
		unnamed protein product [Debaryomyces hansenii CBS767]
		hypothetical protein AN1949.2 [Aspergillus nidulans FGSC A4]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		hypothetical protein DDB0204960 [Dictyostelium discoideum]
		AGR333Cp [Ashbya gossypii ATCC 10895]
		hypothetical protein UM04233.1 [Ustilago maydis 521]
		myc-regulated DEAD/H box 18 RNA helicase [Danio rerio]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		PREDICTED: similar to ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb) [Gallus gallus]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
		hypothetical protein LOC549530 [Xenopus tropicalis]
		hypothetical protein FG04350.1 [Gibberella zeae PH-1]
		hypothetical protein [Neurospora crassa]
		unnamed protein product [Mus musculus]
		unknown [Homo sapiens]
		hypothetical protein CaO19.11444 [Candida albicans SC5314]
		unnamed protein product [Mus musculus]
		hypothetical protein CaO19.3962 [Candida albicans SC5314]
		RNA helicase [Homo sapiens]
		DDX18 [Homo sapiens]
		MGC83105 protein [Xenopus laevis]
		similar to RIKEN cDNA 2310005B10 [Rattus norvegicus]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
		ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb)
		DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium hominis]
		unnamed protein product [Homo sapiens]
		hypothetical protein CNBB4650 [Cryptococcus neoformans var. neoformans B-3501A]
		hypothetical protein [Pongo pygmaeus]
		PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
		CG6375-PA, isoform A [Drosophila melanogaster]
		hypothetical protein MG06522.4 [Magnaporthe grisea 70-15]
		helicase pitchoune [Drosophila melanogaster]
		putative RNA helicase [Oryza sativa (japonica cultivar-group)]
		PREDICTED: similar to ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb) [Canis familiaris]
		Hypothetical protein B0511.6 [Caenorhabditis elegans]
		putative DEAD box helicase protein [Arabidopsis thaliana]
		Hypothetical protein CBG12465 [Caenorhabditis briggsae]
		hypothetical protein B0511.6 - Caenorhabditis elegans
		DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
		DEAD box ATP dependent helicase protein [Arabidopsis thaliana]
		putative myc-regulated DEAD/H box 18 RNA helicase [Oryza sativa (japonica cultivar-group)]
		PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Rattus norvegicus]
		helicase pitchoune [Drosophila simulans]
		helicase pitchoune [Drosophila simulans]
		helicase pitchoune [Drosophila simulans]
		helicase pitchoune [Drosophila simulans]
		DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium chabaudi]
		ENSANGP00000013137 [Anopheles gambiae str. PEST]
		DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium falciparum 3D7]
		unnamed protein product [Homo sapiens]
		PREDICTED: similar to ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb), partial [Bos taurus]
		unnamed protein product [Tetraodon nigroviridis]
		probable ATP-dependent RNA helicase has1 [Plasmodium yoelii yoelii]
		similar to CG6375-PB [Apis mellifera]
		putative RNA-dependent helicase [Guillardia theta]
		PREDICTED: similar to ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb) [Pan troglodytes]
		GLP_47_37459_39102 [Giardia lamblia ATCC 50803]
		PREDICTED: similar to Ddx10 protein [Gallus gallus]
		Ddx10 protein [Mus musculus]
		DDX10 protein [Homo sapiens]
		Ddx10 protein [Mus musculus]
		unnamed protein product [Mus musculus]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 variant [Homo sapiens]
		similar to DEAD box RNA helicases
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
		Ddx10 protein [Mus musculus]
		hypothetical protein [Gallus gallus]
		hypothetical protein MG08049.4 [Magnaporthe grisea 70-15]
		hypothetical protein DDB0185795 [Dictyostelium discoideum]
		probable ATP-dependent RNA helicase [Aspergillus fumigatus]
		PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Canis familiaris]
		hypothetical protein FG05687.1 [Gibberella zeae PH-1]
		hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
		Ddx10 protein [Mus musculus]
		probable putative RNA helicase HCA4 [Neurospora crassa]
		RNA helicase-like protein [Arabidopsis thaliana]
		SPAC1093.05 [Schizosaccharomyces pombe]
		PREDICTED: similar to Ddx10 protein [Rattus norvegicus]
		unnamed protein product [Mus musculus]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		hypothetical protein UM04519.1 [Ustilago maydis 521]
		unnamed protein product [Debaryomyces hansenii CBS767]
		hypothetical protein CaO19.2712 [Candida albicans SC5314]
		putative RNA helicase [Saccharomyces cerevisiae]
		PREDICTED: similar to hypothetical protein, partial [Bos taurus]
		HCA4 [Saccharomyces cerevisiae]
		YJL033W [Saccharomyces cerevisiae]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		ACR040Wp [Ashbya gossypii ATCC 10895]
		putative RNA helicase [Oryza sativa (japonica cultivar-group)]
		ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei]
		Hypothetical protein Y23H5B.6 [Caenorhabditis elegans]
		unnamed protein product [Candida glabrata CBS138]
		Hypothetical protein CBG03992 [Caenorhabditis briggsae]
		similar to CG5800-PA [Apis mellifera]
		GA19139-PA [Drosophila pseudoobscura]
		CG5800-PA [Drosophila melanogaster]
		DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
		unnamed protein product [Mus musculus]
		Ddx55 protein [Danio rerio]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapiens]
		unnamed protein product [Mus musculus]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Mus musculus]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapiens]
		unnamed protein product [Mus musculus]
		similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Gallus gallus]
		mKIAA1595 protein [Mus musculus]
		hypothetical protein CNBA7250 [Cryptococcus neoformans var. neoformans B-3501A]
		ATP-dependent RNA helicase [Danio rerio]
		Hypothetical protein FLJ33908 variant [Homo sapiens]
		PREDICTED: similar to mKIAA1595 protein [Rattus norvegicus]
		Ddx55-prov protein [Xenopus laevis]
		Ddx55 protein [Mus musculus]
		hypothetical protein [Homo sapiens]
		Hca4p helicase DBP4 (helicase CA4). EIF4A-1-family RNA SFII helicase [Cryptosporidium parvum]
		ENSANGP00000009871 [Anopheles gambiae str. PEST]
		unnamed protein product [Tetraodon nigroviridis]
		DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
		putative ATP-dependent RNA helicase [Arabidopsis thaliana]
		putative RNA helicase [Oryza sativa (japonica cultivar-group)]
		CG9630-PA [Drosophila melanogaster]
		Ddx31 protein [Mus musculus]
		similar to Ddx31 protein [Mus musculus]
		ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
		ATP-dependent RNA helicase [Arabidopsis thaliana]
		GA21925-PA [Drosophila pseudoobscura]
		Wu:fc62b08 protein [Danio rerio]
		PREDICTED: similar to Ddx31 protein [Rattus norvegicus]
		LOC495225 protein [Xenopus laevis]
		unnamed protein product [Homo sapiens]
		hypothetical protein DDB0183998 [Dictyostelium discoideum]
		PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 [Canis familiaris]
		DDX31 protein [Homo sapiens]
		helicain B [Homo sapiens]
		OTTHUMP00000064614 [Homo sapiens]
		DEAD box protein [Homo sapiens]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
		DDX47 protein [Homo sapiens]
		MGC81303 protein [Xenopus laevis]
		hypothetical protein [Homo sapiens]
		unnamed protein product [Homo sapiens]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo sapiens]
		similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1; E4-DEAD box protein [Gallus gallus]
		hypothetical protein CaO19.7635 [Candida albicans SC5314]
		ATP-DEPENDENT RNA HELICASE (DEAD box family) [Encephalitozoon cuniculi GB-M1]
		DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
		RNA helicase, putative [Plasmodium yoelii yoelii]
		DEAD/DEAH box helicase [Cryptosporidium parvum]
		RNA helicase [Arabidopsis thaliana]
		unnamed protein product [Tetraodon nigroviridis]
		hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
		putative RNA helicase [Arabidopsis thaliana]
		DEAD\/H box polypeptide 31 [Homo sapiens]
		Hypothetical protein T26G10.1 [Caenorhabditis elegans]
		Hypothetical protein CBG10097 [Caenorhabditis briggsae]
		hypothetical protein AN3176.2 [Aspergillus nidulans FGSC A4]
		SPAC30D11.03 [Schizosaccharomyces pombe]
		RNA helicase, putative [Plasmodium falciparum 3D7]
		SPAC823.08c [Schizosaccharomyces pombe]
		ENSANGP00000015831 [Anopheles gambiae str. PEST]
		ENSANGP00000000531 [Anopheles gambiae str. PEST]
		unnamed protein product [Candida glabrata CBS138]
		unnamed protein product [Debaryomyces hansenii CBS767]
		RNA helicase, putative [Plasmodium berghei]
		DRS1 [Saccharomyces cerevisiae]
		GA21647-PA [Drosophila pseudoobscura]
		RNA helicase [Arabidopsis thaliana]
		hypothetical protein MG07718.4 [Magnaporthe grisea 70-15]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		ATP-dependent RNA helicase
		DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
		unnamed protein product [Debaryomyces hansenii CBS767]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		DEAD box RNA helicase (RH26) [Arabidopsis thaliana]
		RNA helicase-like protein [Arabidopsis thaliana]
		SPBC21H7.04 [Schizosaccharomyces pombe]
		hypothetical protein [Neurospora crassa]
		replication protein A1-like [Arabidopsis thaliana]
		hypothetical protein CaO19.7546 [Candida albicans SC5314]
		CG9253-PA [Drosophila melanogaster]
		RE27528p [Drosophila melanogaster]
		putative replication protein A1 [Arabidopsis thaliana]
		ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
		hypothetical protein DDB0206406 [Dictyostelium discoideum]
		hypothetical protein UM05214.1 [Ustilago maydis 521]
		putative RNA helicase [Oryza sativa (japonica cultivar-group)]
		unnamed protein product [Homo sapiens]
		hypothetical protein DDB0204625 [Dictyostelium discoideum]
		unnamed protein product [Candida glabrata CBS138]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		hypothetical protein CNBD3700 [Cryptococcus neoformans var. neoformans B-3501A]
		ATP-DEPENDENT RNA HELICASE (DEAD box family) [Encephalitozoon cuniculi GB-M1]
		unnamed protein product [Homo sapiens]
		hypothetical protein [Neurospora crassa]
		DEAD box protein [Cryptosporidium hominis]
		putative RNA helicase [Oryza sativa (japonica cultivar-group)]
		hypothetical protein CNBH2720 [Cryptococcus neoformans var. neoformans B-3501A]
		ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar eltor str. N16961]
		DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
		ATP-dependent rRNA helicase RRP3
		COG0513: Superfamily II DNA and RNA helicases [Polaromonas sp. JS666]
		Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity [Saccharomyces cerevisiae]
		unnamed protein product [Yarrowia lipolytica CLIB99]
		hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
		Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc) [Cryptosporidium parvum]
		myc-regulated DEAD/H box 18 RNA helicase-like [Oryza sativa (japonica cultivar-group)]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
		RNA helicase, putative [Plasmodium berghei]
		AAL164Cp [Ashbya gossypii ATCC 10895]
		unnamed protein product [Tetraodon nigroviridis]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
		hypothetical protein DDB0191022 [Dictyostelium discoideum]
		DEAD box polypeptide 27 [Danio rerio]
		DEAD/DEAH box RNA helicase, possible [Cryptosporidium parvum]
		Drs1p, eIF4a-1-family RNA SFII helicase [Cryptosporidium parvum]
		probable ATP-dependent RNA helicase [Desulfotalea psychrophila LSv54]
		putative RNA helicase [Oryza sativa (japonica cultivar-group)]
		PREDICTED: hypothetical protein XP_514711 [Pan troglodytes]
		hypothetical protein FG06628.1 [Gibberella zeae PH-1]
		DEAD/DEAH box RNA helicase [Cryptosporidium hominis]
		putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
		PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1; DEAD/DEXH helicase DDX31; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 [Gallus gallus]
		ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
		DDX27 protein [Homo sapiens]
		putative DEAD box protein [Oryza sativa (japonica cultivar-group)]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
		COG0513: Superfamily II DNA and RNA helicases [Methanococcoides burtonii DSM 6242]
		Predicted RNA helicase (Superfamily II) [Thermoplasma volcanium GSS1]
		ATP-dependent RNA helicase [Thermoplasma volcanium GSS1]
		OTTHUMP00000031249 [Homo sapiens]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
		DDX27 protein [Homo sapiens]
		RNA helicase, putative [Plasmodium chabaudi]
		putative RNA helicase [Oryza sativa (japonica cultivar-group)]
		ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus RIMD 2210633]
		hypothetical protein FG04028.1 [Gibberella zeae PH-1]
		AAL041Cp [Ashbya gossypii ATCC 10895]
		hypothetical protein [Gallus gallus]
		similar to Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27) (HSPC259) (PP3241) [Gallus gallus]
		RNA helicase [Arabidopsis thaliana]
		hypothetical protein MG02417.4 [Magnaporthe grisea 70-15]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 variant [Homo sapiens]
		PREDICTED: similar to Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27) (HSPC259) (PP3241) [Canis familiaris]
		unnamed protein product [Saccharomyces cerevisiae]
		RNA helicase-like protein [Homo sapiens]
		unnamed protein product [Homo sapiens]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		ATP-dependent RNA helicase [Vibrio fischeri ES114]
		DEAD/DEAH box helicase, putative [Plasmodium yoelii yoelii]
		putative ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
		COG0513: Superfamily II DNA and RNA helicases [Pseudomonas fluorescens PfO-1]
		KIAA1595 protein [Homo sapiens]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapiens]
		hypothetical protein [Gallus gallus]
		hypothetical protein [Takifugu rubripes]
		hypothetical protein FG10896.1 [Gibberella zeae PH-1]
		putative ATP-dependent helicase pitchoune [Oryza sativa (japonica cultivar-group)]
		DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
		PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Canis familiaris]
		Hypothetical protein ZK512.2 [Caenorhabditis elegans]
		PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Rattus norvegicus]
		ATP-dependent RNA helicase [Vibrio fischeri ES114]
		COG0513: Superfamily II DNA and RNA helicases [Magnetococcus sp. MC-1]
		COG0513: Superfamily II DNA and RNA helicases [Rhodobacter sphaeroides 2.4.1]
		Ddx49-A-prov protein [Xenopus laevis]
		Hypothetical protein CBG06798 [Caenorhabditis briggsae]
		hypothetical protein [Legionella pneumophila str. Paris]
		DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
		ATP-dependent RNA helicase RhlE [Francisella tularensis subsp. tularensis Schu 4]
		hypothetical protein AGR_C_4238 [Agrobacterium tumefaciens str. C58]
		hypothetical protein [Legionella pneumophila str. Lens]
		ATP-dependent RNA helicase RhlE [uncultured proteobacterium]
		ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis ortholog [Clostridium acetobutylicum ATCC 824]
		PREDICTED: similar to Hypothetical protein MGC76291 [Gallus gallus]
		ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
		ATP-dependent RNA helicase, DEAD box family [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
		COG0513: Superfamily II DNA and RNA helicases [Rubrivivax gelatinosus PM1]
		DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
		DEAD/DEAH box helicase, putative [Plasmodium chabaudi]
		putative RNA helicase [Oryza sativa (japonica cultivar-group)]
		hypothetical protein LOC395046 [Xenopus tropicalis]
		Ddx49-A-prov protein [Xenopus laevis]
		COG0513: Superfamily II DNA and RNA helicases [Burkholderia fungorum LB400]
		PUTATIVE ATP-DEPENDENT RNA HELICASE RHLE (rhlE) [Rickettsia prowazekii str. Madrid E]
		probable ATP-dependent RNA helicase RhlE [Rickettsia typhi str. Wilmington]
		ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
		RNA helicase, putative [Plasmodium falciparum 3D7]
		Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
		PROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN [Ralstonia solanacearum]
		COG0513: Superfamily II DNA and RNA helicases [Microbulbifer degradans 2-40]
		Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27)
		DNA and RNA helicase [Vibrio vulnificus YJ016]
		putative ATP-dependent RNA helicase [uncultured marine proteobacterium ANT8C10]
		ATP-dependent RNA helicase [Oceanobacillus iheyensis HTE831]
		ATP-dependent RNA helicase [Clostridium tetani E88]
		ATP-dependent RNA helicase RhlE [uncultured bacterium 581]
		Hypothetical protein H20J04.4 [Caenorhabditis elegans]
		ATP-dependent RNA helicase, DEAD/DEAH box family [Porphyromonas gingivalis W83]
		ATP-dependent RNA helicase DeaD [Listeria monocytogenes str. 4b F2365]
		ATP-dependent RNA helicase DeaD [Listeria monocytogenes str. 1/2a F6854]
		RNA helicase-like protein [Homo sapiens]
		similar to hypothetical protein FLJ10432 [Mus musculus]
		ATP-dependent RNA helicase [Salmonella typhimurium LT2]
		ATP-dependent RNA helicase, stimulated by 23S rRNA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
		putative ATP-dependent RNA helicase rhlE [Rhodopirellula baltica SH 1]
		similar to CG9253-PA [Apis mellifera]
		ATP-dependent RNA helicase, DEAD box family [Pseudomonas putida KT2440]
		hypothetical protein lin0859 [Listeria innocua Clip11262]
		unnamed protein product [Candida glabrata CBS138]
		Ddx27 protein [Mus musculus]
		hypothetical protein lmo0866 [Listeria monocytogenes EGD-e]
		SPBC24C6.02 [Schizosaccharomyces pombe]
		helicain C [Homo sapiens]
		RNA helicase p54 [Xenopus laevis]
		atp-dependent rna helicase, dead/deah box family [Bacillus anthracis str. 'Ames Ancestor']
		probable ATP-dependent RNA helicase [Gloeobacter violaceus PCC 7421]
		ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus ATCC 10987]
		DEAD box protein-like [Oryza sativa (japonica cultivar-group)]
		DEAD/DEAH box helicase [Bacillus cereus ZK]
		potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
		potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
		ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
		Chain A, Crystal Structure Of The Dead Box Protein Dhh1p
		RH27 helicase [Arabidopsis thaliana]
		ATP-DEPENDENT RNA HELICASE [Mycoplasma pulmonis UAB CTIP]
		hypothetical protein [Gallus gallus]
		ATP-dependent RNA helicase [Methanosarcina mazei Go1]
		COG0513: Superfamily II DNA and RNA helicases [Anabaena variabilis ATCC 29413]
		putative ATP-dependent RNA helicase 1 [Burkholderia pseudomallei K96243]
		RCK [Homo sapiens]
		ATP-dependent RNA helicase, stimulated by 23S rRNA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
		Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
		putative ATP-dependent RNA helicase [Photobacterium profundum SS9]
		ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar eltor str. N16961]
		DDX6 protein [Homo sapiens]
		COG0513: Superfamily II DNA and RNA helicases [Rubrivivax gelatinosus PM1]
		COG0513: Superfamily II DNA and RNA helicases [Pseudomonas syringae pv. syringae B728a]
		PREDICTED: similar to RCK [Rattus norvegicus]
		DNA and RNA helicase [Vibrio vulnificus YJ016]
		ATP-dependent RNA helicase [Clostridium perfringens str. 13]
		ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
		Hypothetical protein CBG03667 [Caenorhabditis briggsae]
		DEAD box protein [Cavia porcellus]
		PREDICTED: similar to probable RNA helicase (EC 3.6.1.-) RCK - human [Canis familiaris]
		COG0513: Superfamily II DNA and RNA helicases [Silicibacter sp. TM1040]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		related to RNA helicase SPB4 [Neurospora crassa]
		PREDICTED: similar to probable RNA helicase (EC 3.6.1.-) RCK - human [Gallus gallus]
		COG0513: Superfamily II DNA and RNA helicases [Thiobacillus denitrificans ATCC 25259]
		PREDICTED: similar to RCK [Rattus norvegicus]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Mus musculus]
		probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
		COG0513: Superfamily II DNA and RNA helicases [Burkholderia cepacia R1808]
		BcDNA.GM05306 [Drosophila melanogaster]
		COG0513: Superfamily II DNA and RNA helicases [Pseudomonas aeruginosa UCBPP-PA14]
		PROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN [Ralstonia solanacearum]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Mus musculus]
		Probable ATP-dependent RNA helicase p54 (Oncogene RCK) (DEAD-box protein 6)
		ATP-dependent RNA helicase RhlE [Rickettsia conorii str. Malish 7]
		DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
		ATP-dependent RNA helicase RhlB [Geobacter sulfurreducens PCA]
		COG0513: Superfamily II DNA and RNA helicases [Cytophaga hutchinsonii]
		COG0513: Superfamily II DNA and RNA helicases [Exiguobacterium sp. 255-15]
		ATP-dependent RNA helicase RhlE [Rickettsia sibirica 246]
		putative ATP-dependent RNA helicase RhlE [Photobacterium profundum SS9]
		ATP-dependent RNA helicase [Vibrio fischeri ES114]
		ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia endosymbiont of Drosophila ananassae]
		ATP-dependent RNA helicase rhlE, putative [Pseudomonas syringae pv. tomato str. DC3000]
		putative ATP-dependent RNA helicase [Shigella flexneri 2a str. 301]
		Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
		ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
		ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
		DHH1 [Saccharomyces cerevisiae]
		ATP-dependent RNA helicase [Idiomarina loihiensis L2TR]
		putative RNA helicase RCK [Mus musculus]
		probable DEAD box protein [Thermoplasma acidophilum DSM 1728]
		COG0513: Superfamily II DNA and RNA helicases [Rickettsia akari str. Hartford]
		COG0513: Superfamily II DNA and RNA helicases [Methylobacillus flagellatus KT]
		ATP-dependent RNA helicase [Clostridium tetani E88]
		ATP-dependent RNA helicase, DEAD box family [Vibrio cholerae O1 biovar eltor str. N16961]
		ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
		ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia endosymbiont of Drosophila melanogaster]
		ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis str. 168]
		ENSANGP00000003952 [Anopheles gambiae str. PEST]
		ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
		hypothetical protein [Pongo pygmaeus]
		ATP-dependent RNA helicase [Danio rerio]
		ATP-dependent RNA helicase [Azoarcus sp. EbN1]
		ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter crescentus CB15]
		ATP-dependent RNA helicase [Nostoc sp. PCC 7120]
		ATP-dependent RNA helicase [Idiomarina loihiensis L2TR]
		DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Mus musculus]
		COG0513: Superfamily II DNA and RNA helicases [Microbulbifer degradans 2-40]
		ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
		ACR197Wp [Ashbya gossypii ATCC 10895]
		putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei K96243]
		PREDICTED: similar to probable RNA helicase (EC 3.6.1.-) RCK - human [Pan troglodytes]
		COG0513: Superfamily II DNA and RNA helicases [Dechloromonas aromatica RCB]
		COG0513: Superfamily II DNA and RNA helicases [Rickettsia rickettsii]
		Similar ATP-dependent RNA Helicase [Arabidopsis thaliana]
		putative ATP-dependent RNA helicase [Salmonella typhimurium LT2]
		ENSANGP00000025552 [Anopheles gambiae str. PEST]
		unnamed protein product [Candida glabrata CBS138]
		putative ATP-dependent RNA helicase rhlE [Salmonella enterica subsp. enterica serovar Typhi Ty2]
		putative ATP-dependent RNA helicase rhlE [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
		COG0513: Superfamily II DNA and RNA helicases [Chloroflexus aurantiacus]
		putative ATP-dependent RNA helicase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
		COG0513: Superfamily II DNA and RNA helicases [Enterococcus faecium]
		ATP-dependent RNA helicase RhlE [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough]
		PREDICTED: similar to Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27) [Rattus norvegicus]
		Putative ATP-dependent RNA helicase rhlE [Escherichia coli CFT073]
		conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
		putative ATP-dependent RNA helicase [Escherichia coli O157:H7 EDL933]
		putative ATP-dependent RNA helicase [Escherichia coli K12]
		putative RNA helicase [Arabidopsis thaliana]
		DEAD family RNA helicase~germ cell specific in Bombyx 5th instar larva, a material factor [Bombyx mori]
		unnamed protein product [Tetraodon nigroviridis]
		autoaggregation-mediating protein [Lactobacillus reuteri]
		CG2173-PA [Drosophila melanogaster]
		ATP-independent RNA helicase dbpA [Escherichia coli CFT073]
		COG0513: Superfamily II DNA and RNA helicases [Trichodesmium erythraeum IMS101]
		unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
		hypothetical protein CNBE5150 [Cryptococcus neoformans var. neoformans B-3501A]
		similar to CG2173-PA [Apis mellifera]
		ATP-dependent RNA helicase [Escherichia coli O157:H7 EDL933]
		ATP-dependent RNA helicase [Bacillus halodurans C-125]
		putative ATP-dependent RNA helicase RhlE [Vibrio fischeri ES114]
		ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
		rhlE; ATP-dependent RNA helicase RhlE [Nitrosomonas europaea ATCC 19718]
		COG0513: Superfamily II DNA and RNA helicases [Ralstonia metallidurans CH34]
		OSJNBb0039L24.10 [Oryza sativa (japonica cultivar-group)]
		RNA helicase [Arabidopsis thaliana]
		COG0513: Superfamily II DNA and RNA helicases [Magnetospirillum magnetotacticum MS-1]
		ATP-dependent RNA helicase [Escherichia coli K12]
		ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
		DEAD/DEAH box helicase, putative [Plasmodium yoelii yoelii]
		COG0513: Superfamily II DNA and RNA helicases [Cytophaga hutchinsonii]
		COG0513: Superfamily II DNA and RNA helicases [Rhodospirillum rubrum]
		ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
		COG0513: Superfamily II DNA and RNA helicases [Burkholderia cepacia R18194]
		ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus G9241]
		ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
		ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus faecalis V583]
		putative ATP-dependent RNA helicase [Erwinia carotovora subsp. atroseptica SCRI1043]
		unnamed protein product [Tetraodon nigroviridis]
		COG0513: Superfamily II DNA and RNA helicases [Dechloromonas aromatica RCB]
		ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
		putative RNA helicase [Dictyostelium discoideum]
		putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi GB-M1]
		vasa-like [Schistocerca gregaria]
		unnamed protein product [Candida glabrata CBS138]
		ATP-dependent RNA helicase [Picrophilus torridus DSM 9790]
		ATP-dependent RNA helicase [Bacillus thuringiensis serovar konkukian str. 97-27]
		COG0513: Superfamily II DNA and RNA helicases [Burkholderia cepacia R18194]
		putative ATP-dependent RNA helicase [Oryza sativa (indica cultivar-group)]
		COG0513: Superfamily II DNA and RNA helicases [Thiobacillus denitrificans ATCC 25259]
		ATP dependent RNA helicase DeaD, superfamily II [Clostridium acetobutylicum ATCC 824]
		COG0513: Superfamily II DNA and RNA helicases [Ralstonia eutropha JMP134]
		ydbR [Bacillus subtilis subsp. subtilis str. 168]
		COG0513: Superfamily II DNA and RNA helicases [Lactobacillus casei ATCC 334]
		putative RNA helicase [Arabidopsis thaliana]
		COG0513: Superfamily II DNA and RNA helicases [Desulfitobacterium hafniense DCB-2]
		ATP-dependent RNA helicase (DEAD/DEAH box family) [Listeria ivanovii]
		LOC495097 protein [Xenopus laevis]
		ATP-dependent RNA helicase [Bacillus cereus ATCC 14579]
		Unknown (protein for IMAGE:7010773) [Xenopus laevis]
		COG0513: Superfamily II DNA and RNA helicases [Magnetospirillum magnetotacticum MS-1]
		COG0513: Superfamily II DNA and RNA helicases [Methanococcoides burtonii DSM 6242]
		COG0513: Superfamily II DNA and RNA helicases [Cytophaga hutchinsonii]
		ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
		GA11795-PA [Drosophila pseudoobscura]
		ATP-dependent RNA helicase RhlE [Photorhabdus luminescens subsp. laumondii TTO1]
		ATP-dependent RNA helicase [Bartonella henselae str. Houston-1]
		putative ATP-dependent RNA-helicase [Oryza sativa (japonica cultivar-group)]
		COG0513: Superfamily II DNA and RNA helicases [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
		CG12759-PA [Drosophila melanogaster]
		COG0513: Superfamily II DNA and RNA helicases [Pseudomonas aeruginosa UCBPP-PA14]
		COG0513: Superfamily II DNA and RNA helicases [Ralstonia metallidurans CH34]
		putative ATP-dependent RNA helicase protein [Sinorhizobium meliloti 1021]
		GA15282-PA [Drosophila pseudoobscura]
		ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
		ATP-dependent RNA helicase [Shigella flexneri 2a str. 301]
		COG0513: Superfamily II DNA and RNA helicases [Burkholderia cepacia R1808]
		hypothetical protein DDB0219818 [Dictyostelium discoideum]
		DNA and RNA helicase [Zymomonas mobilis subsp. mobilis ZM4]
		DEAD box RNA helicase, putative [Arabidopsis thaliana]
		hypothetical protein Chro.30274 [Cryptosporidium hominis]
		ATP-dependent RNA helicase [Xylella fastidiosa Temecula1]
		ethylene-responsive DEAD box RNA helicase, putative (RH30) [Arabidopsis thaliana]
		RNA helicase DbpA [Pseudomonas aeruginosa PAO1]
		ATP-dependent RNA helicase [Bacillus cereus ZK]
		hypothetical protein [Legionella pneumophila str. Lens]
		ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter crescentus CB15]
		atp-dependent rna helicase, dead/deah box family [Bacillus anthracis str. 'Ames Ancestor']
		DEAD box RNA helicase homolog [imported] - Anabaena variabilis
		putative ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009]
		hypothetical protein [Legionella pneumophila str. Paris]

emb|CAG62911.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_449931.1| unnamed protein product [Candida glabrata]
(494 aa)

Score: 632 bits (1631), Expect: 8.25838e-180
Length: 448, Idn/Pos/Gap = 290/382/1 (64%/85%/0%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           H F SL LS+PT+R IE+MGF++MT +QAR IP  ++GRD+L +A+TGSGKTLAFL+P +
Sbjct:  29 HSFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTI  88

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           ELL+  K+ PRNGTG III PTRELA+QIFGV+ +L   H QT  IV+GGANRR EAEKL
Sbjct:  89 ELLHSLKFKPRNGTGVIIITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKL 148

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KT 388
           + G N+LVATPGRLLDHLQ+T+GF+F++L+ LVIDEADR LEIGFE+EM +I++ILP + 
Sbjct: 149 MKGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNED 208

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ+MLFSATQTTKVEDL+++S +  PL + + +E   +T +GL+QG+ +  S++RF LLF
Sbjct: 209 RQSMLFSATQTTKVEDLSRISLRPGPLFINVVSEHDSSTADGLEQGYVVCESDKRFLLLF 268

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           +FLKRNQ+KKIIVF+SSCN VK+YAELLNYID+PVL+LHGKQKQ KRT+TFFEF   E  
Sbjct: 269 SFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERG 328

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L+CTDVAARGLDIPAVDWI+Q+DPPD+P++YIHRVGRTARG +G+G++++FL+P+E+GF
Sbjct: 329 ILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTNGKGKSLMFLIPNELGF 388

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           L++L+ AKVPLNEYEFP  K+A++Q+QLEKL++ NYYL ++A+DG+RSYLQAYASHS+K 
Sbjct: 389 LRYLKAAKVPLNEYEFPTNKIANVQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHSLKT 448

Query: 629 VFNVHELDIAAVAKSFGFSAPPRICLDV 656
           V+ + +LD+A VAKS+GF  PP++ + +
Sbjct: 449 VYQIDKLDLAKVAKSYGFPVPPKVNITI 476

emb|CAA91949.1| SPAC1F7.02c [Schizosaccharomyces pombe]
ref|NP_594488.1| probable ATP-dependent RNA helicase [Schizosaccharomyces pombe]
sp|Q09916|YAK2_SCHPO Putative ATP-dependent RNA helicase C1F7.02c
pir||S62574 probable ATP-dependent RNA helicase - fission yeast  (Schizosaccharomyces pombe)
(578 aa)

Score: 627 bits (1617), Expect: 4.23892e-178
Length: 461, Idn/Pos/Gap = 303/382/3 (65%/82%/0%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L LSE   + I+EMGF  MTEIQ R+IP  L+GRD+L +A+TGSGKTLAFLIP +E
Sbjct:  90 KFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIE 149

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           +LY  K+ PRNGTG III+PTRELA+QIFGV  +L  +HHQT  IV+GGANRR EA+KL+
Sbjct: 150 MLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADKLV 209

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTR 389
            G N+LVATPGRLLDHLQ+T+GFVF +LR LVIDEADR LEIGFE+EM +I++ILP + R
Sbjct: 210 KGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENR 269

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QT+LFSATQTTKVEDLA++S +  PL++ +D+ +P +TVEGL+QG+ +V S++RF LLF+
Sbjct: 270 QTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGLEQGYVVVDSDKRFLLLFS 329

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           FLKRN +KK+IVFMSSC  VK+ AELLNYID+PVLDLHGKQKQ +RT+TFFEF   E   
Sbjct: 330 FLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGI 389

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           LLCT+VAARGLDIPAVDWIVQYDPPD+P++YIHRVGRTARG  G G++++FL PSE+GFL
Sbjct: 390 LLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGTKGTGKSLMFLAPSELGFL 449

Query: 570 QHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDV 629
           ++L+ AKV LNE+EFP  K+A++Q+QLEKLV  NYYLQ+SA+DG+RSYLQAYAS+S+K +
Sbjct: 450 RYLKTAKVSLNEFEFPANKVANVQSQLEKLVSKNYYLQQSAKDGYRSYLQAYASYSLKSI 509

Query: 630 FNVHELDIAAVAKSFGFSAPP--RICLDVLERAKKIRRRGG 668
           F++++LD+A VAKSFGF+ PP   I +    R  K  RR G
Sbjct: 510 FDINKLDLAKVAKSFGFAHPPNVNITIGASGRTDKKERRAG 550

emb|CAA56799.1| RNA helicase [Saccharomyces cerevisiae]
sp|Q03532|HAS1_YEAST Probable ATP-dependent RNA helicase HAS1
ref|NP_014017.1| ATP-dependent RNA helicase; localizes to both the nuclear periphery and nucleolus; highly enriched in nuclear pore complex fractions; constituent of 66S pre-ribosomal particles [Saccharomyces cerevisiae]
(505 aa)

Score: 624 bits (1608), Expect: 4.49517e-177
Length: 489, Idn/Pos/Gap = 294/393/3 (60%/80%/0%)

Query: 171 LARPCPEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTP--HRFDSLPLSEPTLRGIEEM 228
           +A P  + ++ S    + +  E ++ ++      G  T    +F+ L LS+PTL+ IE+M
Sbjct:   1 MATPSNKRSRDSESTEEPVVDEKSTSKQNNAAPEGEQTTCVEKFEELKLSQPTLKAIEKM  60

Query: 229 GFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIII 288
           GF  MT +QAR IP  L+GRD+L +A+TGSGKTLAFLIP +ELL+  K+ PRNGTG I+I
Sbjct:  61 GFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVI 120

Query: 289 APTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQ 348
            PTRELA+QIFGV  +L   H QT  IV+GGANRR EAEKL+ G N+L+ATPGRLLDHLQ
Sbjct: 121 TPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQ 180

Query: 349 STRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQTMLFSATQTTKVEDLAK 407
           +T+GFVF++L+ L+IDEADR LEIGFE+EM +I++ILP + RQ+MLFSATQTTKVEDLA+
Sbjct: 181 NTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKVEDLAR 240

Query: 408 VSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCN 467
           +S +  PL + +  E   +T +GL+QG+ +  S++RF LLF+FLKRNQ+KKIIVF+SSCN
Sbjct: 241 ISLRPGPLFINVVPETDNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCN 300

Query: 468 GVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDW 527
            VK+YAELLNYID+PVL+LHGKQKQ KRT+TFFEF   E   L+CTDVAARGLDIPAVDW
Sbjct: 301 SVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDW 360

Query: 528 IVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKE 587
           I+Q+DPPD+P++YIHRVGRTARG  G+G++++FL P+E+GFL++L+ +KVPLNEYEFP+ 
Sbjct: 361 IIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPNELGFLRYLKASKVPLNEYEFPEN 420

Query: 588 KLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFS 647
           K+A++Q+QLEKL++ NYYL ++A+DG+RSYLQAYASHS+K V+ + +LD+A VAKS+GF 
Sbjct: 421 KIANVQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHSLKTVYQIDKLDLAKVAKSYGFP 480

Query: 648 APPRICLDV 656
            PP++ + +
Sbjct: 481 VPPKVNITI 489

emb|CAG90938.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_462428.1| unnamed protein product [Debaryomyces hansenii]
(568 aa)

Score: 622 bits (1604), Expect: 1.12551e-176
Length: 456, Idn/Pos/Gap = 285/380/1 (62%/83%/0%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+   LSEPTL+ I++MGF++MT++QA+ IP  L+GRD+L +A+TGSGKTLAFLIP +E+
Sbjct: 106 FEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 165

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY  ++ PRNGTG ++++PTRELA+QIFGV  +L +HH QT  IV+GGANRR EAEKL+ 
Sbjct: 166 LYSLRFKPRNGTGVVVVSPTRELALQIFGVARELMAHHSQTFGIVIGGANRRQEAEKLMK 225

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQ 390
           G N+L+ATPGRLLDHLQ+T+GFVF++++ LVIDEADR LEIGFEEEM +I++ILP + RQ
Sbjct: 226 GVNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKILPNEDRQ 285

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           +MLFSATQTTKVEDLA++S +  PL++ + +E   +TV GL+QG+ +  S++RF LLF+F
Sbjct: 286 SMLFSATQTTKVEDLARISLRPGPLYINVASESEASTVAGLEQGYVVCESDKRFLLLFSF 345

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LKRN +KKIIVF+SSCN VK++ ELLNYID+PVLDLHGKQKQ KRT+TFFEF       L
Sbjct: 346 LKRNVKKKIIVFLSSCNCVKYFGELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNATQGIL 405

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           +CTDVAARGLDIPAVDWI+Q+DPPD+P++YIHRVGRTARG  G+G++++FL PSE+GFL+
Sbjct: 406 ICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTAGKGKSLMFLTPSELGFLR 465

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF 630
           +L+ A VPLNEYEFP  K+A++Q+QL KL++GNY+L +SA+DG+RSYLQAYASH +K V+
Sbjct: 466 YLKAANVPLNEYEFPTNKIANVQSQLTKLIKGNYWLHQSAKDGYRSYLQAYASHHLKTVY 525

Query: 631 NVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRR 666
            + +LD+  VAKSFGF  PP++ + +    K I ++
Sbjct: 526 QIDKLDLVKVAKSFGFDVPPKVNITIGASGKSIEKK 561

gb|EAA65114.1| hypothetical protein AN1949.2 [Aspergillus nidulans FGSC A4]
ref|XP_406086.1| hypothetical protein AN1949.2 [Aspergillus nidulans FGSC A4]
(609 aa)

Score: 620 bits (1598), Expect: 5.31307e-176
Length: 472, Idn/Pos/Gap = 302/389/7 (63%/82%/1%)

Query: 200 PKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSG 259
           P+P  G   P +F  L LSE TL+GI+EMGF  MTEIQ R IP  L+GRD+L +A+TGSG
Sbjct: 121 PQPDGG---PKKFTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSG 177

Query: 260 KTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGG 319
           KTLAFLIP +E+L   ++ PRNGTG I+++PTRELA+QIFGV  +L + H QT  IV+GG
Sbjct: 178 KTLAFLIPAIEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELLTAHSQTYGIVIGG 237

Query: 320 ANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMH 379
           ANRR EAEKL  G N+L+ATPGRLLDHLQ+T GFVF++L+ LVIDEADR LE+GFE+EM 
Sbjct: 238 ANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMR 297

Query: 380 EILRILP-KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIV 438
           +I++ILP + RQTMLFSATQTTKVEDLA++S +  PL++ +D  +  +TVEGL+QG+ I 
Sbjct: 298 QIIKILPNEDRQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVIC 357

Query: 439 PSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTST 498
            +++RF LLF+FLKRN +KKIIVF SSCN VK++AELLNYID+PVLDLHGKQKQ KRT+T
Sbjct: 358 EADKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYIDLPVLDLHGKQKQQKRTNT 417

Query: 499 FFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAI 558
           FFEF   +   L+CTDVAARGLDIPAVDWI+Q+DPPD+ ++YIHRVGRTARG +GRGR++
Sbjct: 418 FFEFCNAKQGVLICTDVAARGLDIPAVDWIIQFDPPDDTRDYIHRVGRTARGANGRGRSL 477

Query: 559 LFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           +FL PSEVGFL++L++A+VP+ E++FP +K+ ++Q+QLEKL+  NYYL KSA+DG+RSYL
Sbjct: 478 MFLQPSEVGFLKYLKEARVPVVEFDFPAKKIVNVQSQLEKLISQNYYLNKSAKDGYRSYL 537

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV---LERAKKIRRRG 667
           QAYASHS++ VF+VH+LD+  VAKSFGFS PPRI + +   L R KK +++G
Sbjct: 538 QAYASHSLRSVFDVHKLDLVKVAKSFGFSTPPRIDIQLGSSLSRDKKQQQQG 589

emb|CAH03010.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_451422.1| unnamed protein product [Kluyveromyces lactis]
(497 aa)

Score: 617 bits (1592), Expect: 2.84248e-175
Length: 446, Idn/Pos/Gap = 283/373/1 (63%/83%/0%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+ T++ I +MGF +MT +Q R IP  L+G+D+L +A+TGSGKTLAFLIP +E+
Sbjct:  36 FSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM  95

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L+  K+ PRNGTG I+I PTRELA+QIFGV  +L   H QT  IV+GGANRR EA+KL+ 
Sbjct:  96 LHSLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLMK 155

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQ 390
           G NIL+ATPGRLLDHLQ+T+GF+F++L+ LVIDEADR LEIGFE+EM +I++ILP + RQ
Sbjct: 156 GVNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDRQ 215

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           +MLFSATQTTKVEDLA++S +  PL + +D+E+  +T +GL+QG+ +  S++RF LLF+F
Sbjct: 216 SMLFSATQTTKVEDLARISLRPGPLFINVDSEKDTSTADGLEQGYVVCESDKRFLLLFSF 275

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LKRNQ+KK+IVF+SSCN VK+YAELLNYID+PVL+LHGKQKQ KRT+TFFEF   E   L
Sbjct: 276 LKRNQKKKVIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGIL 335

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           +CTDVAARGLDIPAVDWI+Q+DPPD+P++YIHRVGRTARG  G+G++++FL P+E+GFL+
Sbjct: 336 VCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPTELGFLR 395

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF 630
           +L+ AKVPLNEYEFP  K+A++Q QLEKL++ NYYL + A+DG+RSYLQAYASHS+K V+
Sbjct: 396 YLKAAKVPLNEYEFPTNKIANVQAQLEKLIKSNYYLHQIAKDGYRSYLQAYASHSLKTVY 455

Query: 631 NVHELDIAAVAKSFGFSAPPRICLDV 656
            + +LD+A VAKS+GF  PP++ + +
Sbjct: 456 QIDKLDLAKVAKSYGFPVPPKVNITI 481

gb|EAL66230.1| hypothetical protein DDB0204960 [Dictyostelium discoideum]
(602 aa)

Score: 617 bits (1591), Expect: 4.13773e-175
Length: 450, Idn/Pos/Gap = 288/374/0 (64%/83%/0%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +LP+ E T + IEEMGF +MT IQA++I   L G+D+L +ARTGSGKTLAFLIP +E+
Sbjct: 121 FSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEV 180

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L K+ + PRNGTG III+PTRELA+QI+GV  +L  +H QT  IV+GGA+++ E E+L  
Sbjct: 181 LVKSNFKPRNGTGVIIISPTRELALQIYGVARELMKYHTQTHGIVIGGASKKPEEERLEK 240

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G N+LVATPGRLLDHLQ+T+GF+ ++L+ L+IDEADR LE+GFEEEMH+I++ +PKTRQT
Sbjct: 241 GVNLLVATPGRLLDHLQNTKGFITKNLKCLIIDEADRILEVGFEEEMHQIIKKVPKTRQT 300

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           MLFSATQT KV+D+AKVS    P+++G+D E+ ++TVEGL+QG+ + PSE+RF LL+TFL
Sbjct: 301 MLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSERRFLLLYTFL 360

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K+N  KKIIVF+SSCN VK+ AELLNYID+PVL+LHG+QKQ KRT+TF+EF   E   L+
Sbjct: 361 KKNLSKKIIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRTNTFYEFVNAEKGILI 420

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
           CTDVAARGLDIP+VDWI+QYDPPD+PKEYIHRVGRTARGV  +GRA+LFLLP E+GFL++
Sbjct: 421 CTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVGKKGRALLFLLPKELGFLKY 480

Query: 572 LRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFN 631
           L+ AKVPLNEYEFPK K+A++Q QLEK+V  N+YL  SARD +++Y+ AYASHS+KD+F+
Sbjct: 481 LKLAKVPLNEYEFPKSKIANVQDQLEKVVSQNFYLYNSARDAYKAYICAYASHSLKDIFD 540

Query: 632 VHELDIAAVAKSFGFSAPPRICLDVLERAK 661
           V+ LD+  VAK+FGF  PP++ L+V    K
Sbjct: 541 VNALDLQCVAKAFGFLDPPKVNLNVNSSGK 570

gb|AAS54823.1| AGR333Cp [Ashbya gossypii ATCC 10895]
ref|NP_986999.1| AGR333Cp [Eremothecium gossypii]
(504 aa)

Score: 609 bits (1571), Expect: 8.48491e-173
Length: 447, Idn/Pos/Gap = 284/371/1 (63%/82%/0%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +FD L LS  TL+ I +MGF +MT++QAR IP  ++GRD+L +A+TGSGKTLAFL+P +E
Sbjct:  40 KFDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIE  99

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           +L+  K+ PRNGTG I+I PTRELA+QIFGV  +L   H QT  IV+GGANRR EAEKL 
Sbjct: 100 MLHSLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLA 159

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTR 389
            G N+L+ATPGRLLDHLQ+T+GFVF++L+ LVIDEADR LEIGFE+EM +I++ILP + R
Sbjct: 160 KGVNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNEDR 219

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q+MLFSATQTTKVEDLA++S +  PL + +D+E+  +T +GL+QG+ +  S++RF LLFT
Sbjct: 220 QSMLFSATQTTKVEDLARISLRPGPLFINVDSEKETSTADGLEQGYVVCDSDKRFLLLFT 279

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           FLK+ Q KKIIVF+SSCN VK+YAELLNYID+PVL+LHGKQKQ KRT+TFFEF   E   
Sbjct: 280 FLKKFQNKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGI 339

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+CTDVAARGLDIPAVDWI+Q+DPPD+P++YIHRVGRTA+G  G+G++++FL P E+GFL
Sbjct: 340 LVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAKGTKGKGKSLMFLTPHELGFL 399

Query: 570 QHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDV 629
           ++L+ AKVPLNEYEFP  K+A++Q+QLEKL++ NY L K A+DG+RSYLQAYASHS+K V
Sbjct: 400 RYLKAAKVPLNEYEFPANKIANVQSQLEKLLKTNYELNKIAKDGYRSYLQAYASHSLKTV 459

Query: 630 FNVHELDIAAVAKSFGFSAPPRICLDV 656
           + + +LD+  VAKS+GF  PP++ + +
Sbjct: 460 YQIDKLDLVKVAKSYGFPVPPKVNITI 486

gb|EAK85282.1| hypothetical protein UM04233.1 [Ustilago maydis 521]
ref|XP_401848.1| hypothetical protein UM04233.1 [Ustilago maydis 521]
(517 aa)

Score: 608 bits (1569), Expect: 1.48399e-172
Length: 446, Idn/Pos/Gap = 284/372/2 (63%/83%/0%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LSEPT + I+ MGF  MTE+QAR IP  ++G+D+L +A+TGSGKTL+FLIP +E+
Sbjct:  52 FSILDLSEPTRKAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEM 111

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L++ K+ PRNGTGAIII+PTRELA+QIFGV  +L +HHHQT  I+MGGANRR EA+KL  
Sbjct: 112 LHRLKFKPRNGTGAIIISPTRELALQIFGVAKELMAHHHQTFGIIMGGANRRAEADKLQK 171

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK-TRQ 390
           G N++VATPGRLLDHLQ+T+GFVF +L+ L IDEADR LEIGFE+EM +I++ILP   RQ
Sbjct: 172 GVNLIVATPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNRQ 231

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           +MLFSATQTTKV+DLA++S +  PL++ + A+   +TV  L+QG+ +  S++RF LLFTF
Sbjct: 232 SMLFSATQTTKVQDLARISLRPGPLYINVHADLAASTVSRLEQGYVVCESDRRFLLLFTF 291

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LK+N  KKIIVFMSSCN VK++++LLN+IDVPVLDLHGKQKQ KRT+TFFE+      TL
Sbjct: 292 LKKNAGKKIIVFMSSCNSVKYHSDLLNFIDVPVLDLHGKQKQQKRTNTFFEYCNAPCGTL 351

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           LCTDVAARGLDIP+VDWI+Q+DPPD+P++YIHRVGRTAR  +  G+++LFLLP+E+GFL+
Sbjct: 352 LCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARAGNS-GKSLLFLLPTELGFLR 410

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF 630
            L+ AKVPLNEY FP +K+A++Q QLEKL+  NYYL +SARDG+RSYLQAY S+S+K +F
Sbjct: 411 FLKVAKVPLNEYTFPSDKVANVQGQLEKLISKNYYLHQSARDGYRSYLQAYGSYSLKRIF 470

Query: 631 NVHELDIAAVAKSFGFSAPPRICLDV 656
           ++H+LD+A VAK++GFS PP++ + +
Sbjct: 471 DIHKLDLAKVAKAYGFSVPPKVNITI 496

gb|AAT68066.1| myc-regulated DEAD/H box 18 RNA helicase [Danio rerio]
ref|NP_001003411.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Danio rerio]
(653 aa)

Score: 606 bits (1563), Expect: 7.55165e-172
Length: 487, Idn/Pos/Gap = 294/386/9 (60%/79%/1%)

Query: 175 CPEVTQKSSPALQSLSSEHASEQEQPKPSSGL---LTPHRFDSLP--LSEPTLRGIEEMG 229
           CPE            S+E  S+++ P+  SGL        F SL   +SE TL+G++EMG
Sbjct: 125 CPENGNNEKEG----SAEEDSDEDGPQLPSGLTGAFEDRSFASLSEVVSENTLKGVKEMG 180

Query: 230 FARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIA 289
           F  MTEIQ + I   L GRD+LA+A+TGSGKTLAFLIP +EL+YK K+MPRNGTG I+++
Sbjct: 181 FDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNGTGVIVLS 240

Query: 290 PTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQS 349
           PTRELAMQ +GVL +L +HH  T  ++MGG+NR  EA+KL NG NILVATPGRLLDHLQ+
Sbjct: 241 PTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGRLLDHLQN 300

Query: 350 TRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVS 409
           T GF+F++L+ L+IDEADR LE+GFEEE+ +I+++LPK RQ+MLFSATQT KVEDLA++S
Sbjct: 301 TPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQSMLFSATQTRKVEDLARIS 360

Query: 410 FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGV 469
            +++PL++G+D  +  ATVEGL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  V
Sbjct: 361 LKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSV 420

Query: 470 KFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIV 529
           KF+ ELLNYID+PV+ +HGKQKQ+KRT+TFF+F   +   LLCTDVAARGLDIP VDWIV
Sbjct: 421 KFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIV 480

Query: 530 QYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKL 589
           Q+DPPD+PKEYIHRVGRTARG++GRG A+L L P E+GFL+ L+ AKVPL+E+EF   K+
Sbjct: 481 QFDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLKQAKVPLSEFEFSWTKI 540

Query: 590 ADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAP 649
           +DIQ+QL+KL+E NYYL KSA++ ++SY++AY SHS+K ++NV  LD+  VA SFGF  P
Sbjct: 541 SDIQSQLDKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYNVETLDLPKVAMSFGFKVP 600

Query: 650 PRICLDV 656
           P + L+V
Sbjct: 601 PFVDLNV 607

emb|CAG79009.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_503430.1| hypothetical protein [Yarrowia lipolytica]
(605 aa)

Score: 606 bits (1562), Expect: 9.30322e-172
Length: 445, Idn/Pos/Gap = 281/367/1 (63%/82%/0%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F ++PLSE T++ +++MGF  MT +Q + IP  L+GRD+L +A+TGSGKTLAFLIP +E+
Sbjct: 133 FSTIPLSENTMQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 192

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L K K+ PRNGTG I+++PTRELA+QI+GV  DL ++H QT  IV+GG NRR E EKL  
Sbjct: 193 LRKLKFKPRNGTGVIVVSPTRELALQIYGVARDLMANHSQTLGIVIGGNNRRQEEEKLNK 252

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G N+LV TPGRLLDHLQ+++GFVF++L+ L+IDEADR LEIGFE+EM EI++ILPK RQ+
Sbjct: 253 GVNLLVCTPGRLLDHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKERQS 312

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           MLFSATQTTKVEDLA++S ++ PL+L +D     +T EGL+QG+ +  S++RF LLF+FL
Sbjct: 313 MLFSATQTTKVEDLARISLKKGPLYLNVDEHNVSSTAEGLEQGYVVCDSDKRFLLLFSFL 372

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           KRN  KKIIVF+SSCN VKFY ELLNYID+PVLDLHGKQKQ KRT+TFFEF   +   L+
Sbjct: 373 KRNAGKKIIVFLSSCNSVKFYGELLNYIDLPVLDLHGKQKQQKRTNTFFEFINAKQGVLI 432

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
           CTDVAARGLDIP VDWI+Q+DPPD+P++YIHRVGRTARG    G++I+FL PSE+GFL++
Sbjct: 433 CTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARG-SASGKSIMFLTPSELGFLRY 491

Query: 572 LRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFN 631
           L+ AKVPLNEYEFP +K+A++Q+QLEKL+  NY+L  SA+DG+R+YLQAYASH +K V+ 
Sbjct: 492 LKAAKVPLNEYEFPNKKIANVQSQLEKLISSNYWLNTSAKDGYRAYLQAYASHHLKTVYQ 551

Query: 632 VHELDIAAVAKSFGFSAPPRICLDV 656
           + +LD+  VAKSFGF+ PP++ + +
Sbjct: 552 IDKLDLVKVAKSFGFNVPPKVNISI 576

ref|XP_422125.1| PREDICTED: similar to ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb) [Gallus gallus]
(662 aa)

Score: 604 bits (1558), Expect: 2.36854e-171
Length: 470, Idn/Pos/Gap = 289/383/3 (61%/81%/0%)

Query: 200 PKPSSGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTG 257
           P   +G    + F SL   +SE TL+GI +MGF  MTEIQ ++I   L GRDILA+A+TG
Sbjct: 159 PLGLTGAFEDNSFTSLAGLVSENTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAKTG 218

Query: 258 SGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM 317
           SGKTLAFLIP VEL+YK K+MPRNGTG II++PTRELAMQ +GVL +L +HH  T  ++M
Sbjct: 219 SGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRELAMQTYGVLKELMNHHVHTYGLIM 278

Query: 318 GGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEE 377
           GG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR LE+GFEEE
Sbjct: 279 GGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILEVGFEEE 338

Query: 378 MHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTI 437
           M +I+++LPK RQTMLFSATQT KVEDLAK+S +++PL++G+D  +  ATV+GL+QG+ +
Sbjct: 339 MKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVV 398

Query: 438 VPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTS 497
            PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +HGKQKQ+KRT+
Sbjct: 399 CPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTT 458

Query: 498 TFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
           TFF+F   E   LLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG++GRG A
Sbjct: 459 TFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHA 518

Query: 558 ILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSY 617
           +L L P E+GFL++L+ A+VPL+E+EF   K++DIQ+QLEKL+E NY+L KSA++ +++Y
Sbjct: 519 LLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKAY 578

Query: 618 LQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV-LERAKKIRRR 666
           ++AY SHS+K ++NV  LD+  V+ SFGF  PP + L+V   + +++++R
Sbjct: 579 IRAYDSHSLKQIYNVGNLDLNKVSLSFGFKVPPYVDLNVNSNQGRRLQKR 628

ref|NP_080136.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gb|AAH28246.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 (DEAD-box protein 18)
(660 aa)

Score: 601 bits (1549), Expect: 3.25316e-170
Length: 530, Idn/Pos/Gap = 299/405/11 (56%/76%/2%)

Query: 138 APVMETELQN--AAARTPADEEVASSRATVHEMEPLARPCPEV--TQKSSPALQSLSSEH 193
           +P   T L N  AA   P D EV   +    +M   A P  +   T++S+ A +    + 
Sbjct:  86 SPQKLTTLANGEAAPTPPPDSEVKKKKKKKRKMANDAGPDTKKAKTEESAEACEEPEDDV 145

Query: 194 ASEQEQPKPS-----SGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALS 246
               +   PS     +G      F SL   ++E TL+ IEEMGF RMTEIQ ++I   L 
Sbjct: 146 KKADDSEVPSLPLGLTGAFEDTSFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLE 205

Query: 247 GRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA 306
           GRD+LA+A+TGSGKTLAFLIP++EL+ K K+MPRNGTG +I++PTRELAMQ FGVL +L 
Sbjct: 206 GRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELM 265

Query: 307 SHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEA 366
           +HH  T  ++MGG+NR  E +KL+NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEA
Sbjct: 266 THHVHTYGLIMGGSNRSAEVQKLLNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEA 325

Query: 367 DRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA 426
           DR L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++ VA
Sbjct: 326 DRILDVGFEEELKQIIKLLPARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVA 385

Query: 427 TVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDL 486
           TV+GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +
Sbjct: 386 TVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAI 445

Query: 487 HGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGR 546
           HGKQKQ+KRT+TFF+F   +   LLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGR
Sbjct: 446 HGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGR 505

Query: 547 TARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYL 606
           TARG++GRG A+L L P E+GFL++L+ +KVPLN+++F   K++DIQ+QLEKL+E NY+L
Sbjct: 506 TARGLNGRGHALLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFL 565

Query: 607 QKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
            KSA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 566 HKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 615

ref|NP_001016776.1| hypothetical protein LOC549530 [Xenopus tropicalis]
(640 aa)

Score: 600 bits (1548), Expect: 3.68689e-170
Length: 470, Idn/Pos/Gap = 288/378/3 (61%/80%/0%)

Query: 200 PKPSSGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTG 257
           P   +G      F SL   ++E TLR + EMGF  MTEIQ +AI   L GRD+LA+ARTG
Sbjct: 135 PMGLTGAFEDTAFSSLAESVNENTLRAVTEMGFTHMTEIQHKAIRPLLEGRDVLAAARTG 194

Query: 258 SGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM 317
           SGKTLAFLIP +EL+YK K+MPRNGTG +I++PTRELAMQ +GVL +L +HH  T  ++M
Sbjct: 195 SGKTLAFLIPAIELVYKLKFMPRNGTGVLILSPTRELAMQTYGVLKELMAHHVHTFGLIM 254

Query: 318 GGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEE 377
           GG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR LE+GFE+E
Sbjct: 255 GGSNRSAEAQKLANGVNIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILEVGFEQE 314

Query: 378 MHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTI 437
           M +I+ +LPK RQTMLFSATQT KVEDLA++S +++PL++G+D  +  ATV+GL+QG+ +
Sbjct: 315 MKQIINLLPKRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDHKETATVDGLEQGYVV 374

Query: 438 VPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTS 497
            PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PV+ +HGKQKQ+KRT+
Sbjct: 375 CPSEKRFLLLFTFLKKNRKKKMMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQTKRTT 434

Query: 498 TFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
           TFF+F   E   LLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG+ GRG A
Sbjct: 435 TFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGIDGRGHA 494

Query: 558 ILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSY 617
           +L L P E+GFL++L+ AKVPL+E+EF   K++DIQTQLEKL+E NYYL KSA++ +++Y
Sbjct: 495 LLILRPEELGFLRYLKQAKVPLSEFEFSWSKISDIQTQLEKLIEKNYYLHKSAQEAYKAY 554

Query: 618 LQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLER-AKKIRRR 666
           ++AY SHS K +F+V+ L++  VA SFGF  PP + L+V     K++++R
Sbjct: 555 IRAYDSHSHKQIFDVNTLNLPKVAISFGFQVPPFVDLNVNSSGGKRLQKR 604

gb|EAA70960.1| hypothetical protein FG04350.1 [Gibberella zeae PH-1]
ref|XP_384526.1| hypothetical protein FG04350.1 [Gibberella zeae PH-1]
(590 aa)

Score: 600 bits (1548), Expect: 3.68689e-170
Length: 490, Idn/Pos/Gap = 291/388/10 (59%/79%/2%)

Query: 195 SEQEQPKPSSGLLT--------PHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALS 246
           +E     P+ G LT           F+ L LSE T++ I EM F +MTEIQ R IP +L+
Sbjct:  92 AENNTDLPNGGQLTLPPVAGAEAQSFEELKLSEKTMKAINEMKFTKMTEIQRRGIPPSLA 151

Query: 247 GRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA 306
           GRD+L +A+TGSGKTLAFLIP++E+L   ++ PRNGTG I+++PTRELA+QIFGV  +L 
Sbjct: 152 GRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKPRNGTGVIVVSPTRELALQIFGVARELM 211

Query: 307 SHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEA 366
           +HH QT  IV+GGANRR EAEKL  G N+L+ATPGRLLDHLQ+T  FVF++L+ LVIDEA
Sbjct: 212 AHHSQTYGIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNTP-FVFKNLKSLVIDEA 270

Query: 367 DRCLEIGFEEEMHEILRILPKT-RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPV 425
           DR LEIGFE+EM +I+++LPK  RQTMLFSATQTTKVEDLA++S +  PL++ +D E+  
Sbjct: 271 DRILEIGFEDEMRQIIKVLPKEDRQTMLFSATQTTKVEDLARISLRPGPLYINVDEEKQY 330

Query: 426 ATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLD 485
           +TVEGL+QG+ I  ++ RF LLF+FLKRN +KKIIVF SSC  VK++AELLNYID+PVLD
Sbjct: 331 STVEGLEQGYIICETDMRFLLLFSFLKRNLKKKIIVFFSSCACVKYHAELLNYIDLPVLD 390

Query: 486 LHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVG 545
           LHGKQKQ KRT+TFFEF   +  TL+CTDVAARGLDIP+VDWI+Q+DPPD+P++YIHRVG
Sbjct: 391 LHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVG 450

Query: 546 RTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYY 605
           RTARG + +GR+++FL P+E+GFL HL+ A+VP+ E+ FP +K+ ++Q+QLEKL+  NYY
Sbjct: 451 RTARGSNNKGRSLMFLQPNELGFLSHLKAARVPVAEFNFPTKKIINVQSQLEKLISQNYY 510

Query: 606 LQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRR 665
           L KSA+DG+RSY+ AYASHS++ VF++++LD+A VAKSFGF+ PPR+ + +     + ++
Sbjct: 511 LNKSAKDGYRSYMHAYASHSLRSVFDINKLDLAKVAKSFGFTQPPRVDITLGASMSRDKK 570

Query: 666 RGGGGGFGDE 675
           + G   +G +
Sbjct: 571 QQGRRAYGSQ 580

ref|XP_332041.1| hypothetical protein [Neurospora crassa]
gb|EAA29692.1| hypothetical protein [Neurospora crassa]
(578 aa)

Score: 600 bits (1548), Expect: 4.28436e-170
Length: 467, Idn/Pos/Gap = 288/378/2 (61%/80%/0%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+ T++ I EMGF +MTEIQ R IP  L+G+D+L +A+TGSGKTLAFLIP +E+
Sbjct: 109 FSELNLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM 168

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L   ++ PRNGTGAI++ PTRELA+QIFGV  +L  +H QT  +V+GGANRR EAEKL  
Sbjct: 169 LSSLRFKPRNGTGAIVVTPTRELALQIFGVARELMKNHSQTYGVVIGGANRRAEAEKLGK 228

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT-RQ 390
           G N+L+ATPGRLLDHLQ+T  FVF+++R L+IDEADR LEIGFE+EM +I++ILPK  RQ
Sbjct: 229 GVNLLIATPGRLLDHLQNTP-FVFKNMRSLIIDEADRILEIGFEDEMRQIIKILPKEDRQ 287

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           TMLFSATQTTKVEDLA++S +  PL++ +D E+  +TVEGL QG+ +V +++RF LLF+F
Sbjct: 288 TMLFSATQTTKVEDLARISLRPGPLYVNVDEEKQFSTVEGLDQGYVVVDADKRFLLLFSF 347

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LK+ Q+KK+IVF SSCN VK+Y+ELL YID+ VLDLHGKQKQ KRT+TFFEF   +  TL
Sbjct: 348 LKKMQKKKVIVFFSSCNSVKYYSELLQYIDLQVLDLHGKQKQQKRTNTFFEFCNAKQGTL 407

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           +CTDVAARGLDIPAVDWIVQ+DPPD+P++YIHRVGRTARG + +GR++LFL P+E+GFL 
Sbjct: 408 ICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLLFLQPNELGFLA 467

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF 630
           HL+ AKVP+ EY+FPK K+ ++Q+QLEKL+  NYYL +SA+DG+RSYL AYASHS++ VF
Sbjct: 468 HLKAAKVPVVEYDFPKSKILNVQSQLEKLIGQNYYLNQSAKDGYRSYLHAYASHSLRSVF 527

Query: 631 NVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWK 677
           ++H+LD+  VAKSFGFS PPR+ + +     + +++     +G + K
Sbjct: 528 DIHKLDLVKVAKSFGFSTPPRVDITLASSMSRDKKQTSRRAYGSQPK 574

dbj|BAB31877.1| unnamed protein product [Mus musculus]
(660 aa)

Score: 598 bits (1541), Expect: 2.19847e-169
Length: 530, Idn/Pos/Gap = 298/404/11 (56%/76%/2%)

Query: 138 APVMETELQN--AAARTPADEEVASSRATVHEMEPLARPCPEV--TQKSSPALQSLSSEH 193
           +P   T L N  AA   P D EV   +    +M   A P  +   T++S+ A +    + 
Sbjct:  86 SPQKLTTLANGEAAPTPPPDSEVKKKKKKKRKMANDAGPDTKKAKTEESAEACEEPEDDV 145

Query: 194 ASEQEQPKPS-----SGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALS 246
               +   PS     +G      F SL   ++E TL+ IEEMGF RMTEIQ ++I   L 
Sbjct: 146 KKADDSEVPSLPLGLTGAFEDTSFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLE 205

Query: 247 GRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA 306
           GRD+LA+A+TGSGKTLAFLIP++EL+ K K+MPRNGTG +I++PTRELAMQ F VL +L 
Sbjct: 206 GRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFDVLKELM 265

Query: 307 SHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEA 366
           +HH  T  ++MGG+NR  E +KL+NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEA
Sbjct: 266 THHVHTYGLIMGGSNRSAEVQKLLNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEA 325

Query: 367 DRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA 426
           DR L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++ VA
Sbjct: 326 DRILDVGFEEELKQIIKLLPARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVA 385

Query: 427 TVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDL 486
           TV+GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +
Sbjct: 386 TVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAI 445

Query: 487 HGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGR 546
           HGKQKQ+KRT+TFF+F   +   LLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGR
Sbjct: 446 HGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGR 505

Query: 547 TARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYL 606
           TARG++GRG A+L L P E+GFL++L+ +KVPLN+++F   K++DIQ+QLEKL+E NY+L
Sbjct: 506 TARGLNGRGHALLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFL 565

Query: 607 QKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
            KSA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 566 HKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 615

gb|AAX88947.1| unknown [Homo sapiens]
(546 aa)

Score: 598 bits (1541), Expect: 2.31133e-169
Length: 468, Idn/Pos/Gap = 284/379/7 (60%/80%/1%)

Query: 196 EQEQPKPS-----SGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGR 248
           E E   PS     +G      F SL   ++E TL+ I+EMGF  MTEIQ ++I   L GR
Sbjct:  34 EDESEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGR  93

Query: 249 DILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH 308
           D+LA+A+TGSGKTLAFLIP VEL+ K ++MPRNGTG +I++PTRELAMQ FGVL +L +H
Sbjct:  94 DLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTH 153

Query: 309 HHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADR 368
           H  T  ++MGG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR
Sbjct: 154 HVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADR 213

Query: 369 CLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATV 428
            L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++  ATV
Sbjct: 214 ILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATV 273

Query: 429 EGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHG 488
           +GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +HG
Sbjct: 274 DGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHG 333

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTA 548
           KQKQ+KRT+TFF+F   +  TLLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTA
Sbjct: 334 KQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTA 393

Query: 549 RGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQK 608
           RG++GRG A+L L P E+GFL++L+ +KVPL+E++F   K++DIQ+QLEKL+E NY+L K
Sbjct: 394 RGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHK 453

Query: 609 SARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           SA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 454 SAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 501

gb|EAL03256.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
(569 aa)

Score: 597 bits (1539), Expect: 3.75002e-169
Length: 456, Idn/Pos/Gap = 284/369/2 (62%/80%/0%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F++   SEPT++ I+EMGF +MT++QA+ IP  L+GRD+L +A+TGSGKTLAFLIP +EL
Sbjct: 114 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 173

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY  K  PRNGT  III PTRELA+QIFGV  +L   H QT  IV+GGA+RR EA KL  
Sbjct: 174 LYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLAK 233

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQ 390
           G N+LVATPGRLLDHL++T+ FVF +L+ LVIDEADR LEIGFE+EM +I+++LP + RQ
Sbjct: 234 GVNLLVATPGRLLDHLKNTQ-FVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQ 292

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           +MLFSATQTTKVEDLA++S +  PL++ +  E+ V+T +GL+QG+ +  S++RF LLF+F
Sbjct: 293 SMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSF 352

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LKRN +KKIIVF+SSCN VKFY+ELLNYID+PVLDLHGKQKQ KRT+TFFEF   +   L
Sbjct: 353 LKRNVKKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGIL 412

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           +CTDVAARGLDIPAVDWIVQ+DPPD+P++YIHRVGRTARG  G+G++++FL PSE+GFL+
Sbjct: 413 VCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLR 472

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF 630
           +L+ AKVPLNEYEFP  K+A+IQ+QL KL++ NY L +SA+DG+R+YLQAYASH +K V+
Sbjct: 473 YLKAAKVPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGYRAYLQAYASHGLKTVY 532

Query: 631 NVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRR 666
            + +LD+  V+ SFG    PR+ L +     K ++R
Sbjct: 533 QIDKLDLKKVSASFGLDQVPRVNLSIGGTKTKKQKR 568

dbj|BAC36015.1| unnamed protein product [Mus musculus]
(660 aa)

Score: 597 bits (1539), Expect: 3.90978e-169
Length: 530, Idn/Pos/Gap = 298/404/11 (56%/76%/2%)

Query: 138 APVMETELQN--AAARTPADEEVASSRATVHEMEPLARPCPEV--TQKSSPALQSLSSEH 193
           +P   T L N  AA   P D EV   +    +M   A P  +   T++S+ A +    + 
Sbjct:  86 SPQKLTTLANGEAAPTPPPDSEVKKKKKKKRKMANDAGPDTKKAKTEESAEACEEPEDDV 145

Query: 194 ASEQEQPKPS-----SGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALS 246
               +   PS     +G      F SL   ++E TL+ IEEMGF RMTEIQ ++I   L 
Sbjct: 146 KKADDSEVPSLPLGLTGAFEDTSFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLE 205

Query: 247 GRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA 306
           GRD+LA+A+TGSGKTLAFLIP++EL+ K K+MPRNGTG +I++PTRELAMQ FGVL +L 
Sbjct: 206 GRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELM 265

Query: 307 SHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEA 366
           +HH  T  ++MGG+NR  E +KL+NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEA
Sbjct: 266 THHVHTYGLIMGGSNRSAEVQKLLNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEA 325

Query: 367 DRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA 426
           DR L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++ VA
Sbjct: 326 DRILDVGFEEELKQIIKLLPARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVA 385

Query: 427 TVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDL 486
           TV+GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +
Sbjct: 386 TVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAI 445

Query: 487 HGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGR 546
           HGKQKQ+KRT+TFF+F   +   LLCTDVAARGLDIP VDWIVQYDPPD+PKE IHRVGR
Sbjct: 446 HGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKECIHRVGR 505

Query: 547 TARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYL 606
           TARG++GRG A+L L P E+GFL++L+ +KVPLN+++F   K++DIQ+QLEKL+E NY+L
Sbjct: 506 TARGLNGRGHALLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFL 565

Query: 607 QKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
            KSA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 566 HKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 615

gb|EAL03092.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
(565 aa)

Score: 597 bits (1539), Expect: 4.07634e-169
Length: 456, Idn/Pos/Gap = 284/369/2 (62%/80%/0%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F++   SEPT++ I+EMGF +MT++QA+ IP  L+GRD+L +A+TGSGKTLAFLIP +EL
Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 169

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY  K  PRNGT  III PTRELA+QIFGV  +L   H QT  IV+GGA+RR EA KL  
Sbjct: 170 LYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLAK 229

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQ 390
           G N+LVATPGRLLDHL++T+ FVF +L+ LVIDEADR LEIGFE+EM +I+++LP + RQ
Sbjct: 230 GVNLLVATPGRLLDHLKNTQ-FVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQ 288

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           +MLFSATQTTKVEDLA++S +  PL++ +  E+ V+T +GL+QG+ +  S++RF LLF+F
Sbjct: 289 SMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSF 348

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LKRN +KKIIVF+SSCN VKFY+ELLNYID+PVLDLHGKQKQ KRT+TFFEF   +   L
Sbjct: 349 LKRNVKKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGIL 408

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           +CTDVAARGLDIPAVDWIVQ+DPPD+P++YIHRVGRTARG  G+G++++FL PSE+GFL+
Sbjct: 409 VCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLR 468

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF 630
           +L+ AKVPLNEYEFP  K+A+IQ+QL KL++ NY L +SA+DG+R+YLQAYASH +K V+
Sbjct: 469 YLKAAKVPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGYRAYLQAYASHGLKTVY 528

Query: 631 NVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRR 666
            + +LD+  V+ SFG    PR+ L +     K ++R
Sbjct: 529 QIDKLDLKKVSASFGLDQVPRVNLSIGGTKTKKQKR 564

emb|CAA67295.1| RNA helicase [Homo sapiens]
pir||S71758 DEAD box protein MrDb, Myc-regulated - human
(610 aa)

Score: 596 bits (1537), Expect: 7.55822e-169
Length: 468, Idn/Pos/Gap = 284/379/7 (60%/80%/1%)

Query: 196 EQEQPKPS-----SGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGR 248
           E E   PS     +G      F SL   ++E TL+ I+EMGF  MTEIQ ++I   L GR
Sbjct:  98 EDESEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGR 157

Query: 249 DILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH 308
           D+LA+A+TGSGKTLAFLIP VEL+ K ++MPRNGTG +I++PTRELAMQ FGVL +L +H
Sbjct: 158 DLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTH 217

Query: 309 HHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADR 368
           H  T  ++MGG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR
Sbjct: 218 HVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADR 277

Query: 369 CLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATV 428
            L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++  ATV
Sbjct: 278 ILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATV 337

Query: 429 EGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHG 488
           +GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +HG
Sbjct: 338 DGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHG 397

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTA 548
           KQKQ+KRT+TFF+F   +  TLLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTA
Sbjct: 398 KQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTA 457

Query: 549 RGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQK 608
           RG++GRG A+L L P E+GFL++L+ +KVPL+E++F   K++DIQ+QLEKL+E NY+L K
Sbjct: 458 RGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHK 517

Query: 609 SARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           SA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 518 SAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 565

emb|CAG33341.1| DDX18 [Homo sapiens]
(610 aa)

Score: 596 bits (1536), Expect: 9.468e-169
Length: 468, Idn/Pos/Gap = 284/378/7 (60%/80%/1%)

Query: 196 EQEQPKPS-----SGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGR 248
           E E   PS     +G      F SL   ++E TL+ I+EMGF  MTEIQ ++I   L GR
Sbjct:  98 EDESEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGR 157

Query: 249 DILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH 308
           D+LA+A+TGSGKTLAFLIP VEL+ K ++MPRNGTG +I++PTRELAMQ FGVL +L +H
Sbjct: 158 DLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTH 217

Query: 309 HHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADR 368
           H  T  ++MGG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR
Sbjct: 218 HVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADR 277

Query: 369 CLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATV 428
            L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S ++ PL++G+D ++  ATV
Sbjct: 278 ILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKGPLYVGVDDDKANATV 337

Query: 429 EGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHG 488
           +GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +HG
Sbjct: 338 DGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHG 397

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTA 548
           KQKQ+KRT+TFF+F   +  TLLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTA
Sbjct: 398 KQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTA 457

Query: 549 RGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQK 608
           RG++GRG A+L L P E+GFL++L+ +KVPL+E++F   K++DIQ+QLEKL+E NY+L K
Sbjct: 458 RGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHK 517

Query: 609 SARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           SA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 518 SAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 565

gb|AAH68907.1| MGC83105 protein [Xenopus laevis]
(638 aa)

Score: 595 bits (1533), Expect: 2.27374e-168
Length: 497, Idn/Pos/Gap = 292/387/6 (58%/77%/1%)

Query: 176 PEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHR---FDSLP--LSEPTLRGIEEMGF 230
           PE + + S     +  +   E+  P    GL        F SL   ++E TL+ I EMGF
Sbjct: 106 PEASDQESKCENHVEKKEDEEENGPTLPMGLTGAFEDTAFSSLADSVNENTLKAITEMGF 165

Query: 231 ARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAP 290
             MTEIQ +AI   L GRD+LA+ARTGSGKTLAFLIP +EL+YK K+MPRNGTG +I++P
Sbjct: 166 THMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELIYKLKFMPRNGTGVLILSP 225

Query: 291 TRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQST 350
           TRELAMQ +GVL +L +HH  T  ++MGG+NR  EA+KL NG NI+VATPGRLLDH+Q+T
Sbjct: 226 TRELAMQTYGVLKELMAHHVHTFGLIMGGSNRSAEAQKLANGVNIVVATPGRLLDHMQNT 285

Query: 351 RGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSF 410
            GF++++L+ LVIDEADR LE+GFE+EM +I+ +LPK RQTMLFSATQT KVEDLA++S 
Sbjct: 286 PGFMYKNLQCLVIDEADRILEVGFEQEMKQIINLLPKRRQTMLFSATQTRKVEDLARISM 345

Query: 411 QQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVK 470
           +++PL++G+D  +  ATV+GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK
Sbjct: 346 KKEPLYVGVDDHKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKMMVFFSSCMSVK 405

Query: 471 FYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQ 530
           ++ ELLNYID+PV+ +HGKQKQ+KRT+TFF+F   E   LLCTDVAARGLDIP VDWIVQ
Sbjct: 406 YHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQ 465

Query: 531 YDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLA 590
           YDPPD+PKEYIHRVGRTARG+ GRG A+L L P E+GFL++L+ AKVPL+E+EF   K++
Sbjct: 466 YDPPDDPKEYIHRVGRTARGIDGRGHALLILRPEELGFLRYLKQAKVPLSEFEFSWSKIS 525

Query: 591 DIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPP 650
           DIQTQ+EKL+E NYYL KSA++ +++Y++AY SHS K +F+V+ L++  VA SFGF  PP
Sbjct: 526 DIQTQVEKLIEKNYYLHKSAQEAYKAYIRAYDSHSHKQIFDVNTLNLPKVALSFGFQVPP 585

Query: 651 RICLDVLER-AKKIRRR 666
            + L+V     K++++R
Sbjct: 586 FVDLNVNSSGGKRLQKR 602

ref|NP_001006997.1| similar to RIKEN cDNA 2310005B10 [Rattus norvegicus]
gb|AAH83919.1| Similar to RIKEN cDNA 2310005B10 [Rattus norvegicus]
(674 aa)

Score: 594 bits (1531), Expect: 3.65838e-168
Length: 459, Idn/Pos/Gap = 281/377/2 (61%/82%/0%)

Query: 200 PKPSSGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTG 257
           P   +G      F SL   ++E TL+ IEEMGF  MTEIQ ++I   L GRD+LA+A+TG
Sbjct: 171 PLGVTGAFEDTSFASLSNLVNENTLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTG 230

Query: 258 SGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM 317
           SGKTLAFLIP++EL+ K K+MPRNGTG +I++PTRELAMQ FGVL +L +HH  T  ++M
Sbjct: 231 SGKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIM 290

Query: 318 GGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEE 377
           GG+NR  E +KL+NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR L++GFEEE
Sbjct: 291 GGSNRSAEVQKLLNGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEE 350

Query: 378 MHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTI 437
           + +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++ VATV+GL+QG+ +
Sbjct: 351 LKQIIKLLPARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVV 410

Query: 438 VPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTS 497
            PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +HGKQKQ+KRT+
Sbjct: 411 CPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTT 470

Query: 498 TFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
           TFF+F   +   LLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG++GRG A
Sbjct: 471 TFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHA 530

Query: 558 ILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSY 617
           +L L P E+GFL++L+ +KVPLN+++F   K++DIQ+QLEKL+E NY+L KSA++ ++SY
Sbjct: 531 LLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSY 590

Query: 618 LQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           ++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 591 IRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 629

gb|AAH01238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
gb|AAH24739.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
gb|AAH03360.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
(670 aa)

Score: 592 bits (1525), Expect: 1.71263e-167
Length: 440, Idn/Pos/Gap = 276/370/0 (62%/84%/0%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           ++E TL+ I+EMGF  MTEIQ ++I   L GRD+LA+A+TGSGKTLAFLIP VEL+ K +
Sbjct: 186 VNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR 245

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
           +MPRNGTG +I++PTRELAMQ FGVL +L +HH  T  ++MGG+NR  EA+KL NG NI+
Sbjct: 246 FMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINII 305

Query: 337 VATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSA 396
           VATPGRLLDH+Q+T GF++++L+ LVIDEADR L++GFEEE+ +I+++LP  RQTMLFSA
Sbjct: 306 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSA 365

Query: 397 TQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQR 456
           TQT KVEDLA++S +++PL++G+D ++  ATV+GL+QG+ + PSE+RF LLFTFLK+N++
Sbjct: 366 TQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRK 425

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
           KK++VF SSC  VK++ ELLNYID+PVL +HGKQKQ+KRT+TFF+F   +  TLLCTDVA
Sbjct: 426 KKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVA 485

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAK 576
           ARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG++GRG A+L L P E+GFL++L+ +K
Sbjct: 486 ARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSK 545

Query: 577 VPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELD 636
           VPL+E++F   K++DIQ+QLEKL+E NY+L KSA++ ++SY++AY SHS+K +FNV+ L+
Sbjct: 546 VPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLN 605

Query: 637 IAAVAKSFGFSAPPRICLDV 656
           +  VA SFGF  PP + L+V
Sbjct: 606 LPQVALSFGFKVPPFVDLNV 625

sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb)
ref|NP_006764.3| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
(670 aa)

Score: 592 bits (1525), Expect: 1.72698e-167
Length: 440, Idn/Pos/Gap = 276/370/0 (62%/84%/0%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           ++E TL+ I+EMGF  MTEIQ ++I   L GRD+LA+A+TGSGKTLAFLIP VEL+ K +
Sbjct: 186 VNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR 245

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
           +MPRNGTG +I++PTRELAMQ FGVL +L +HH  T  ++MGG+NR  EA+KL NG NI+
Sbjct: 246 FMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINII 305

Query: 337 VATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSA 396
           VATPGRLLDH+Q+T GF++++L+ LVIDEADR L++GFEEE+ +I+++LP  RQTMLFSA
Sbjct: 306 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSA 365

Query: 397 TQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQR 456
           TQT KVEDLA++S +++PL++G+D ++  ATV+GL+QG+ + PSE+RF LLFTFLK+N++
Sbjct: 366 TQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRK 425

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
           KK++VF SSC  VK++ ELLNYID+PVL +HGKQKQ+KRT+TFF+F   +  TLLCTDVA
Sbjct: 426 KKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVA 485

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAK 576
           ARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG++GRG A+L L P E+GFL++L+ +K
Sbjct: 486 ARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSK 545

Query: 577 VPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELD 636
           VPL+E++F   K++DIQ+QLEKL+E NY+L KSA++ ++SY++AY SHS+K +FNV+ L+
Sbjct: 546 VPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLN 605

Query: 637 IAAVAKSFGFSAPPRICLDV 656
           +  VA SFGF  PP + L+V
Sbjct: 606 LPQVALSFGFKVPPFVDLNV 625

gb|EAL36013.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium hominis]
(519 aa)

Score: 589 bits (1519), Expect: 9.39477e-167
Length: 512, Idn/Pos/Gap = 286/375/12 (55%/73%/2%)

Query: 203 SSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTL 262
           SSG  +  +F+S  + +   + ++EMG   MTEIQA+AIP  LSG+D+L +A+TGSGKTL
Sbjct:  19 SSGYFSDVKFESSNICDQLKKALKEMGMETMTEIQAKAIPRILSGKDVLGAAKTGSGKTL  78

Query: 263 AFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR 322
           AFLIP   LLY  +++PRNGTG I+I+PTREL++QI+ V  +L  +  QT  +VMGGANR
Sbjct:  79 AFLIPAANLLYNVEFLPRNGTGVIVISPTRELSLQIYEVCRELCKYLPQTHGLVMGGANR 138

Query: 323 RTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEIL 382
           RTEAEKL  G NILVATPGRLLDHLQ+T+ F+F++L  LVIDEADR LEIGFEEEM++I+
Sbjct: 139 RTEAEKLSKGVNILVATPGRLLDHLQNTKQFLFKNLLNLVIDEADRILEIGFEEEMNQII 198

Query: 383 RILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ 442
           ++LPK RQT LFSATQTTKV DL ++S +  P+ +       +ATV GL+QG+ I  + Q
Sbjct: 199 KLLPKERQTSLFSATQTTKVADLVRLSLKN-PVLVESKNTSSIATVSGLEQGYVIAQANQ 257

Query: 443 RFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEF 502
           RF LL+TFLK+N+ KK++VF SSC   KF+ EL NY+D+    +HGK+KQ+ R  T+++F
Sbjct: 258 RFLLLYTFLKKNRDKKVMVFFSSCMSTKFHEELFNYVDLTCSSIHGKKKQTSRMQTYYDF 317

Query: 503 ARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLL 562
              +   LLCTDVAARGLDIP VDWIVQYDPPD+P+EYIHRVGRTARG  G G+A+LFLL
Sbjct: 318 CSADKGLLLCTDVAARGLDIPNVDWIVQYDPPDDPREYIHRVGRTARGAGGTGKALLFLL 377

Query: 563 PSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYA 622
           P E+ FLQ+LR   +PLNEY F K K+A++Q QLE+L+E NY+L  SARD +R+YL +YA
Sbjct: 378 PEEIAFLQYLRKMNIPLNEYVFGKNKVANVQNQLERLIEKNYHLHCSARDAYRAYLHSYA 437

Query: 623 SHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWKNRDRL 682
           SH++KD FNV+ LD+  +A SFGFS PP++ L++    K  R        G++ KN+   
Sbjct: 438 SHALKDAFNVYSLDLQQIAFSFGFSTPPKVDLNLKSGGKASRNA------GNKSKNKSS- 490

Query: 683 KDLIRKRLASGQRFRASNPHGKRDEQDRRQFV 714
                    SG +F ASNP+G RD+ D RQFV
Sbjct: 491 ----NPYFKSGHKFSASNPYGVRDKNDNRQFV 518

dbj|BAA91709.1| unnamed protein product [Homo sapiens]
(670 aa)

Score: 588 bits (1517), Expect: 1.48657e-166
Length: 440, Idn/Pos/Gap = 275/369/0 (62%/83%/0%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           ++E TL+ I+EMGF  MTEIQ ++I   L GRD+LA+A+TGSGKTLAFLIP VEL+ K +
Sbjct: 186 VNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR 245

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
           +M RNGTG +I++PTRELAMQ FGVL +L +HH  T  ++MGG+NR  EA+KL NG NI+
Sbjct: 246 FMTRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINII 305

Query: 337 VATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSA 396
           VATPGRLLDH+Q+T GF++++L+ LVIDEADR L++GFEEE+ +I+++LP  RQTMLFSA
Sbjct: 306 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSA 365

Query: 397 TQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQR 456
           TQT KVEDLA++S +++PL++G+D ++  ATV+GL+QG+ + PSE+RF LLFTFLK+N++
Sbjct: 366 TQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRK 425

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
           KK++VF SSC  VK++ ELLNYID+PVL +HGKQKQ+KRT+TFF+F   +  TLLCTDVA
Sbjct: 426 KKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVA 485

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAK 576
           ARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG++GRG A+L L P E+GFL++L+ +K
Sbjct: 486 ARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSK 545

Query: 577 VPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELD 636
           VPL+E++F   K++DIQ+QLEKL+E NY+L KSA++ ++SY++AY SHS+K +FNV+ L+
Sbjct: 546 VPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLN 605

Query: 637 IAAVAKSFGFSAPPRICLDV 656
           +  VA SFGF  PP + L+V
Sbjct: 606 LPQVALSFGFKVPPFVDLNV 625

gb|EAL22588.1| hypothetical protein CNBB4650 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW41805.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_569112.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
(607 aa)

Score: 587 bits (1512), Expect: 5.02619e-166
Length: 522, Idn/Pos/Gap = 302/392/22 (57%/75%/4%)

Query: 147 NAAARTPADE--EVASSRATVHEMEPLARPCPEVTQKSSPALQSLSSEHASEQEQPKPSS 204
           NA    PA    E +SS+ T+ + +P           SS A+    S   ++ E+     
Sbjct:  81 NAHDEAPAKRVPEASSSKVTLDDSQP-------APATSSDAVLGARSAPGTDYERVP--- 130

Query: 205 GLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAF 264
                  F +L LS PT   IE MGF  MTE+QAR IP  L+G+D+L +ARTGSGKT+AF
Sbjct: 131 -------FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAF 183

Query: 265 LIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRT 324
           LIP VELL   ++ P NGTG III+PTRELA+QIFGV  +L   H QT  ++MGGANR+ 
Sbjct: 184 LIPSVELLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQGHSQTFGVLMGGANRKA 243

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           EA+KL+ G N++VATPGRLLDHLQ+T+GFVF++L+ LVIDEADR LEIGFEEEM +I+++
Sbjct: 244 EADKLVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKL 303

Query: 385 LP-KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
           LP + RQ+MLFSATQTTKV DLA++S +  PL++ +D  +  +T + L+QG+ +  S+QR
Sbjct: 304 LPSENRQSMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCESDQR 363

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
           F LLFTFLK+N +KK+IVF SSCN VK++AELLNYIDVPVLDLHGKQKQ KRT+TFFEF 
Sbjct: 364 FMLLFTFLKKNLKKKVIVFFSSCNSVKYHAELLNYIDVPVLDLHGKQKQQKRTNTFFEFI 423

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLP 563
                 LLCTDVAARGLDIP VDWI+Q+DPPD+P++YIHRVGRTAR     G+++LFLLP
Sbjct: 424 NAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKS-GKSLLFLLP 482

Query: 564 SEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYAS 623
           SE+GFL+ L+ AKVPLNEY+FP++K+AD+Q QLE L+  N+YL  SARDG+RSYLQAYAS
Sbjct: 483 SELGFLRFLKVAKVPLNEYQFPQKKVADVQKQLESLISKNHYLNTSARDGYRSYLQAYAS 542

Query: 624 HSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLE-RAKKIR 664
           +S+K +F+V++LD+A V K+FGF+ PP++ + V   +AKK R
Sbjct: 543 YSLKKIFDVNKLDLAKVGKAFGFAVPPKVNISVGSVKAKKSR 584

emb|CAH92187.1| hypothetical protein [Pongo pygmaeus]
(670 aa)

Score: 585 bits (1507), Expect: 2.27572e-165
Length: 564, Idn/Pos/Gap = 299/408/32 (53%/72%/5%)

Query: 124 VSICELQRAELRTPA---------PVMETELQN--AAARTPADEEVASSRA---TVHEME 169
           VS+ E Q  ++   A         P   T L N  AA ++P  E     +     V++ E
Sbjct:  63 VSLSETQNGDMPQEAVENIKVKKSPQKSTVLTNGEAAMQSPNSESKKKKKKKRKMVNDAE 122

Query: 170 PLARPCPEVTQKSSPALQSLSSEHASEQEQPKPS---------------SGLLTPHRFDS 214
           P  +   +   K  P  +S  +   +E    KP                +G      F S
Sbjct: 123 PDTKKA-KTENKGQPEEESAETPKETENNVEKPDNDEDESEVPSLPLGLTGAFEDTSFAS 181

Query: 215 LP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL 272
           L   ++E TL+ I+EMGF  MTEIQ ++I   L GRD+LA+A+TGSGKTLAFLIP VEL+
Sbjct: 182 LCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELI 241

Query: 273 YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLING 332
            K ++MPRNGTG +I++PTRELAMQ FGVL +L +HH  T  ++MGG+NR  EA+KL NG
Sbjct: 242 VKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANG 301

Query: 333 TNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTM 392
            NI+VATPGRLLD +Q+T GF++++L+ LVIDEADR L++GFEEE+ +I+++LP  RQTM
Sbjct: 302 INIIVATPGRLLDDMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 361

Query: 393 LFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLK 452
           LFSATQT KVEDLA++S +++PL++G+D ++  ATV+GL+QG+ + PSE+RF LLFTFLK
Sbjct: 362 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 421

Query: 453 RNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLC 512
           +N++KK++VF SSC  VK++ ELLNYID+PVL +HGKQKQ+KRT+TFF+F   +  TLLC
Sbjct: 422 KNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLC 481

Query: 513 TDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHL 572
           T VAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG++GRG A+L L P E+GFL++L
Sbjct: 482 TGVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYL 541

Query: 573 RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNV 632
           + +KVPL+E++F   K++DIQ+QLEKL+E NY+L KSA++ ++SY++AY SHS+K +FNV
Sbjct: 542 KQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNV 601

Query: 633 HELDIAAVAKSFGFSAPPRICLDV 656
           + L++  VA SFGF  PP + L++
Sbjct: 602 NNLNLPQVALSFGFKVPPFVDLNI 625

ref|XP_515753.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
(681 aa)

Score: 584 bits (1506), Expect: 3.12476e-165
Length: 451, Idn/Pos/Gap = 276/370/11 (61%/82%/2%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           ++E TL+ I+EMGF  MTEIQ ++I   L GRD+LA+A+TGSGKTLAFLIP VEL+ K +
Sbjct: 186 VNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR 245

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
           +MPRNGTG +I++PTRELAMQ FGVL +L +HH  T  ++MGG+NR  EA+KL NG NI+
Sbjct: 246 FMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINII 305

Query: 337 VATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSA 396
           VATPGRLLDH+Q+T GF++++L+ LVIDEADR L++GFEEE+ +I+++LP  RQTMLFSA
Sbjct: 306 VATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSA 365

Query: 397 TQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQR 456
           TQT KVEDLA++S +++PL++G+D ++  ATV+GL+QG+ + PSE+RF LLFTFLK+N++
Sbjct: 366 TQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRK 425

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLH-----------GKQKQSKRTSTFFEFARR 505
           KK++VF SSC  VK++ ELLNYID+PVL +H           GKQKQ+KRT+TFF+F   
Sbjct: 426 KKLMVFFSSCMSVKYHYELLNYIDLPVLAIHVSDDDELIENRGKQKQNKRTTTFFQFCNA 485

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
           +  TLLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG++GRG A+L L P E
Sbjct: 486 DSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 545

Query: 566 VGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHS 625
           +GFL++L+ +KVPL+E++F   K++DIQ+QLEKL+E NY+L KSA++ ++SY++AY SHS
Sbjct: 546 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHS 605

Query: 626 MKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           +K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 606 LKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 636

ref|NP_524446.3| CG6375-PA, isoform A [Drosophila melanogaster]
ref|NP_732694.2| CG6375-PB, isoform B [Drosophila melanogaster]
gb|AAM50274.1| LD46167p [Drosophila melanogaster]
gb|AAN13900.2| CG6375-PB, isoform B [Drosophila melanogaster]
gb|AAF55951.2| CG6375-PA, isoform A [Drosophila melanogaster]
gb|AAL49024.1| RE48840p [Drosophila melanogaster]
sp|Q9VD51|PIT_DROME Probable ATP-dependent helicase pitchoune
(680 aa)

Score: 568 bits (1463), Expect: 2.54013e-160
Length: 440, Idn/Pos/Gap = 270/356/0 (61%/80%/0%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           +SE TLR I+EMGF  MTEIQ++++   L GRD++ +A+TGSGKTLAFLIP VEL+ K +
Sbjct: 194 VSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR 253

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
           +MPRNGTG III+PTREL+MQ FGVL +L +HHH T  +VMGG+NR+ E+EKL  G NIL
Sbjct: 254 FMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINIL 313

Query: 337 VATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSA 396
           VATPGRLLDHLQ++  F++++L+ L+IDE DR LEIGFEEE+ +I+ +LPK RQTMLFSA
Sbjct: 314 VATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSA 373

Query: 397 TQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQR 456
           TQT ++E L+K++ + +P+++G+   Q  ATV+GL+QG+ + PSE+R  +LFTFLK+N++
Sbjct: 374 TQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRK 433

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
           KK++VF SSC  VK++ EL NYID+PV  +HGKQKQ+KRT+TFF+F   E   LLCTDVA
Sbjct: 434 KKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVA 493

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAK 576
           ARGLDIP VDWIVQYDPPD+P+EYIHRVGRTARG    G A+L + P E+GFL++L+ AK
Sbjct: 494 ARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAK 553

Query: 577 VPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELD 636
           VPLNE+EF  +K+ADIQ QLEKL+  NY+L +SA++ F+SY++AY SH +K +FNV+ LD
Sbjct: 554 VPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLD 613

Query: 637 IAAVAKSFGFSAPPRICLDV 656
           + AVAKSFGF  PP + L V
Sbjct: 614 LQAVAKSFGFLVPPVVDLKV 633

gb|EAA56551.1| hypothetical protein MG06522.4 [Magnaporthe grisea 70-15]
ref|XP_370007.1| hypothetical protein MG06522.4 [Magnaporthe grisea 70-15]
(578 aa)

Score: 567 bits (1460), Expect: 6.35999e-160
Length: 474, Idn/Pos/Gap = 287/372/10 (60%/78%/2%)

Query: 202 PSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKT 261
           P++       F  L LSE T++ IEEMGF +MTEIQ R IP  L+G+D+L +A+TGSGKT
Sbjct: 104 PTTAESEAQAFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKT 163

Query: 262 LAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGAN 321
           LAFLIP VE+L   K+ PRNGTG I+++PTRELA+QIFGV  DL  HH QT  IV+GGAN
Sbjct: 164 LAFLIPAVEMLRSLKFKPRNGTGVIVVSPTRELALQIFGVARDLMKHHSQTYGIVIGGAN 223

Query: 322 RRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEI 381
           RR EAEKL  G N+L+ATPGRLLDHLQ+T  FVF++LR LVIDEADR LEIGFE+EM +I
Sbjct: 224 RRAEAEKLSKGVNLLIATPGRLLDHLQNTP-FVFKNLRSLVIDEADRILEIGFEDEMRQI 282

Query: 382 LRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSE 441
           ++ILPK RQ+MLFSATQTTKVEDLA+VS +  PL+L +D E+  +TVEGL+QG+ +  ++
Sbjct: 283 IKILPKERQSMLFSATQTTKVEDLARVSLRPGPLYLNVDEEKEYSTVEGLEQGYVVCEAD 342

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFE 501
           +RF LLF+FL++ ++KKIIVF SSCN VK+YAELLNYID  VLDLHGKQKQ KRT+TFFE
Sbjct: 343 KRFILLFSFLQKMKKKKIIVFFSSCNSVKYYAELLNYIDCQVLDLHGKQKQQKRTNTFFE 402

Query: 502 FARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFL 561
           F   +  TL+CTDVAARGL          +DPPD+P++YIHRVGRTARG + +GR+++FL
Sbjct: 403 FCNADRGTLICTDVAARGL---------DFDPPDDPRDYIHRVGRTARGTNKKGRSLMFL 453

Query: 562 LPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAY 621
           LPSEVGFL +L+ A+VP+ E++FP + + ++Q+QLEKL+  NYYL  SA+DGFRSYL AY
Sbjct: 454 LPSEVGFLTYLKQARVPVVEFDFPTKSIKNVQSQLEKLIGKNYYLNSSAKDGFRSYLHAY 513

Query: 622 ASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDE 675
           ASHS++ VF++++LD+A VAKSFGF+ PPR+ + +     K ++ GG   +G +
Sbjct: 514 ASHSLRSVFDINKLDLAKVAKSFGFATPPRVDIQLGASMSKDKKAGGRRAYGSQ 567

gb|AAC27683.1| helicase pitchoune [Drosophila melanogaster]
(663 aa)

Score: 557 bits (1435), Expect: 5.29802e-157
Length: 449, Idn/Pos/Gap = 267/354/0 (59%/78%/0%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           +SE TLR I+EMGF  MTEIQ++++   L GRD++ +A+TGSGKTLAFLIP VEL+ K +
Sbjct: 177 VSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR 236

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
           +MPRNGTG III+PTREL+MQ FGVL +L +HHH T  +VMGG+NR+ E+EKL  G NIL
Sbjct: 237 FMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINIL 296

Query: 337 VATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSA 396
           VATPGRLLDHLQ++  F++++L+ L+IDE DR LEIGFEEE+ +I+ +LPK RQTMLFSA
Sbjct: 297 VATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSA 356

Query: 397 TQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQR 456
           TQT ++E L+K++ + +P+++G+   Q  ATV+GL+QG+ + PSE+R  +LFTFLK+N++
Sbjct: 357 TQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRK 416

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
           KK++VF SSC  VK++ EL NYID+PV  +HGKQKQ+KRT+TFF+F   E   LLCTDVA
Sbjct: 417 KKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVA 476

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAK 576
           ARGLDIP VDWIVQYDPP +    IHRVGRTARG    G A+L + P E+GFL++L+ AK
Sbjct: 477 ARGLDIPQVDWIVQYDPPGDQASIIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAK 536

Query: 577 VPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELD 636
           VPLNE+EF  +K+ADIQ QLEKL+  NY+L +SA++ F+SY++AY SH +K +FNV+ LD
Sbjct: 537 VPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLD 596

Query: 637 IAAVAKSFGFSAPPRICLDVLERAKKIRR 665
           + AVAKSFGF  PP + L V   +   R+
Sbjct: 597 LQAVAKSFGFLVPPVVDLKVARPSGSDRK 625

ref|XP_469984.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
gb|AAO72375.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
(590 aa)

Score: 554 bits (1428), Expect: 2.85818e-156
Length: 518, Idn/Pos/Gap = 269/372/28 (51%/71%/5%)

Query: 204 SGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLA 263
           SG+LT   F  L +SEPT R I EM +  +T+IQAR+IP  L+G+D++ +A+TGSGKTLA
Sbjct:  90 SGILTNMLFSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLA 149

Query: 264 FLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
           FLIP +E+L+ A +MPRNGTG +++ PTRELA+Q   V  +L  +H QT   ++GG  RR
Sbjct: 150 FLIPAIEMLHHAHFMPRNGTGVVVVCPTRELAIQTHNVAKELMKYHSQTLGYIIGGNGRR 209

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
            EA++L  G N+LVATPGRLLDHLQ+T+GF++  L+ L+IDEADR LE  FEE+M +I +
Sbjct: 210 GEADQLAKGVNLLVATPGRLLDHLQNTKGFIYRRLKCLIIDEADRLLEQNFEEDMKQIFK 269

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQ------KPLHLGIDAEQPVATVEGLQQGFTI 437
            LP  RQT+LFSATQT +V++ AK+SF++      KP+++G+D  +  ATVEGLQQG+ +
Sbjct: 270 RLPLNRQTVLFSATQTEQVKEFAKLSFEKNEESTSKPVYVGVDDAETNATVEGLQQGYCV 329

Query: 438 VPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTS 497
           + S +RF +L+ FLK+ Q KK++VF SSCN VKF+AELLN++ +   D+HGKQKQ KRT+
Sbjct: 330 IDSARRFLVLYAFLKKKQNKKVMVFFSSCNSVKFHAELLNFLQIECSDIHGKQKQQKRTT 389

Query: 498 TFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
           TFF F + E   LLCT+VAARGLDIP VD+IVQYDPPDEPK+YIHRVGRTARG  G+G A
Sbjct: 390 TFFNFCKAEKGILLCTNVAARGLDIPDVDFIVQYDPPDEPKDYIHRVGRTARGEKGKGEA 449

Query: 558 ILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSY 617
           +LFLLP E+ FL +L+ AK+ L E  F + K+ ++Q+ LE +V  NY+L +SA++ +RSY
Sbjct: 450 LLFLLPQELKFLIYLKAAKISLTELVFNENKVPNLQSHLENIVGENYFLNQSAKEAYRSY 509

Query: 618 LQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWK 677
           + AY SHSMKD+F+VH L++  VA SF F  PP++ +D+   A K RR+           
Sbjct: 510 ILAYDSHSMKDIFDVHNLNLKDVAASFCFKNPPKVNIDLESSASKHRRK----------- 558

Query: 678 NRDRLKDLIRKRLASGQR--FRASNPHGKRDEQDRRQF 713
                     +++  G+R    A+NP+G++   D+RQF
Sbjct: 559 ---------MRKVDGGRRHGISAANPYGRKGGDDKRQF 587

ref|XP_533327.1| PREDICTED: similar to ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb) [Canis familiaris]
(650 aa)

Score: 546 bits (1406), Expect: 1.08674e-153
Length: 468, Idn/Pos/Gap = 269/362/26 (57%/77%/5%)

Query: 196 EQEQPKPS-----SGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGR 248
           E++   PS     +G      F SL   ++E TL+ I+EMGF  MTEIQ ++I   L GR
Sbjct: 157 EEDSEVPSLPLGLTGAFEDTSFASLSSLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGR 216

Query: 249 DILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH 308
           D+LA+A+TGSGKTLAFLIP VEL+ K K+MPRNGTG +I++PTRELAMQ FGVL +L  +
Sbjct: 217 DLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMMY 276

Query: 309 HHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADR 368
           H  T  ++MGG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR
Sbjct: 277 HVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADR 336

Query: 369 CLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATV 428
            L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++  ATV
Sbjct: 337 ILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATV 396

Query: 429 EGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHG 488
           +GL+Q                   +N++KK++VF SSC  VK++ ELLNYID+PVL +HG
Sbjct: 397 DGLEQ-------------------KNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHG 437

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTA 548
           +QKQ+KRT+TFF+F   +   LLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTA
Sbjct: 438 RQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTA 497

Query: 549 RGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQK 608
           RG++GRG A+L L P E+GFL++L+ +KVPL+E+EF   K++DIQ+QLEKL+E NY+L K
Sbjct: 498 RGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHK 557

Query: 609 SARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           SA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 558 SAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 605

gb|AAC17654.2| Hypothetical protein B0511.6 [Caenorhabditis elegans]
ref|NP_492779.1| RNA helicase (61.3 kD) (1L203) [Caenorhabditis elegans]
(544 aa)

Score: 544 bits (1401), Expect: 4.19909e-153
Length: 484, Idn/Pos/Gap = 271/362/3 (55%/74%/0%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRD 249
           +H +E+      S  LT   F SL   ++   L+ ++ +GF  MTEIQA++I   L G+D
Sbjct:  48 KHQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKD 107

Query: 250 ILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHH 309
           +LASA+TGSGKTLAFL+P +ELL+K  W   NGTG II++PTREL+MQ +GVL +L    
Sbjct: 108 VLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGS 167

Query: 310 HQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRC 369
           + T  +VMGG+NR  E +KL  G +ILVATPGRLLDHLQ+T  F+  +++ L+IDEADR 
Sbjct: 168 NLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRI 227

Query: 370 LEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVE 429
           L+IGFE EM ++LR LPK RQ+MLFSAT + KV++L K++    P+ + +  +   ATVE
Sbjct: 228 LDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEEATVE 287

Query: 430 GLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGK 489
           GLQQG+ + PS++R  LLFTFLK+N+ KK++VF SSCN VKF+ ELLNYID+P + +HGK
Sbjct: 288 GLQQGYIVAPSDKRLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGK 347

Query: 490 QKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR 549
           QKQ KRT+TFF+F + E   LLCTDVAARGLDIPAVDWIVQYDP DEP+EYIHRVGRTAR
Sbjct: 348 QKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTAR 407

Query: 550 GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKS 609
           G +G G+A+L L P E+GFL++L+ AKV LNE+EF   K+A+IQ+QLE L+  NYYL KS
Sbjct: 408 GTNGSGKALLVLRPEELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYLNKS 467

Query: 610 ARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAK-KIRRRGG 668
           A++ ++ YL+AY SHS+KD+F+V  +D+ AV+KSFGFS PP + L +  + K +IR +  
Sbjct: 468 AKEAYKCYLRAYDSHSLKDIFDVTNMDLTAVSKSFGFSVPPFVDLPISNKPKVEIRSKLS 527

Query: 669 GGGF 672
           G G+
Sbjct: 528 GAGY 531

gb|AAM20071.1| putative DEAD box helicase protein [Arabidopsis thaliana]
gb|AAL49809.1| putative DEAD box helicase protein [Arabidopsis thaliana]
dbj|BAB02218.1| DEAD-box ATP-dependent RNA helicase [Arabidopsis thaliana]
ref|NP_188490.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
(568 aa)

Score: 542 bits (1397), Expect: 1.24231e-152
Length: 471, Idn/Pos/Gap = 265/363/4 (56%/77%/0%)

Query: 205 GLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAF 264
           G++T   FDSL LSE T   I+EMGF  MT+IQA +I   L G+D+L +ARTGSGKTLAF
Sbjct:  84 GIMTNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAF 143

Query: 265 LIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRT 324
           LIP VELL+K ++ PRNGTG I+I PTRELA+Q   V  +L  HH QT ++V+GG NRR+
Sbjct: 144 LIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRS 203

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           EA+++ +G+N+++ATPGRLLDHLQ+T+ F+++HL+ LVIDEADR LE  FEE+M++IL+I
Sbjct: 204 EAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKI 263

Query: 385 LPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRF 444
           LPKTRQT LFSATQT+KV+DLA+VS    P+H+ +D  +   T EGL+QG+ +VPS+QR 
Sbjct: 264 LPKTRQTALFSATQTSKVKDLARVSLTS-PVHVDVDDGRRKVTNEGLEQGYCVVPSKQRL 322

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            LL +FLK+N  KKI+VF S+C  V+F+ E++   DV V D+HG   Q++RT TFF+F +
Sbjct: 323 ILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMK 382

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
            +   LLCTDVAARGLDIP+VDWI+QYDPPD+P EYIHRVGRTARG   +G+A+L L+P 
Sbjct: 383 AKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPE 442

Query: 565 EVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH 624
           E+ F+++L+ AKVP+ E EF +++L+++Q+ LEK V  +Y L K A+D +R+YL AY SH
Sbjct: 443 ELQFIRYLKAAKVPVKELEFNEKRLSNVQSALEKCVAKDYNLNKLAKDAYRAYLSAYNSH 502

Query: 625 SMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLE---RAKKIRRRGGGGGF 672
           S+KD+FNVH LD+ AVA+SF FS+PP++ L++     + +K R++ G  GF
Sbjct: 503 SLKDIFNVHRLDLLAVAESFCFSSPPKVNLNIESGAGKVRKARKQQGRNGF 553

emb|CAE67057.1| Hypothetical protein CBG12465 [Caenorhabditis briggsae]
(542 aa)

Score: 540 bits (1391), Expect: 6.5911e-152
Length: 484, Idn/Pos/Gap = 274/360/4 (56%/74%/0%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRD 249
           E  +E+      S  LT   F SL   ++   L+ ++ +GF  +TEIQA+ I   L G+D
Sbjct:  47 EQQAEENTGTKVSEFLTKTTFASLDGKVNSNLLKSVQRLGFTTLTEIQAKTIDPLLEGKD 106

Query: 250 ILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHH 309
           +LASA+TGSGKTLAFL+P +ELL+K  W   NGTG II++PTREL+MQ +GVL +L    
Sbjct: 107 VLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLTELLEGS 166

Query: 310 HQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRC 369
           + T  +VMGG+NR  E +KL  G +ILVATPGRLLDHLQ+   F+  +L+ L+IDEADR 
Sbjct: 167 NLTFGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQND-NFLVRNLKCLIIDEADRI 225

Query: 370 LEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVE 429
           L+IGFE EM ++LR LPK RQ+MLFSAT + KV++L K++    P+ + ++ +   ATVE
Sbjct: 226 LDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVRVSVNEKAEEATVE 285

Query: 430 GLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGK 489
           GLQQG+ + PS++R  LLFTFLK+N+ KK++VF SSCN VKF+ ELLNYIDVP + +HGK
Sbjct: 286 GLQQGYIVAPSDKRLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDVPCMSIHGK 345

Query: 490 QKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR 549
           QKQ KRTSTFF F + E   LLCTDVAARGLDIPAVDWIVQYDPPDEP+EYIHRVGRTAR
Sbjct: 346 QKQQKRTSTFFTFCQAESGILLCTDVAARGLDIPAVDWIVQYDPPDEPREYIHRVGRTAR 405

Query: 550 GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKS 609
           G +G G+A+L L P E+GFL++L+ AKV LNE+EF   K+A+IQTQLE L+  NYYL KS
Sbjct: 406 GTNGSGKALLVLRPEELGFLRYLKAAKVTLNEFEFSWNKVANIQTQLESLISKNYYLNKS 465

Query: 610 ARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAK-KIRRRGG 668
           A++ ++ YL+AY SHS+KD+F+V  +D+ AV+KSFGFS PP + L +  + K +IR +  
Sbjct: 466 AKEAYKCYLRAYDSHSLKDIFDVTTMDLTAVSKSFGFSVPPFVDLPISNKPKVEIRSKLS 525

Query: 669 GGGF 672
           G G+
Sbjct: 526 GAGY 529

pir||T33113 hypothetical protein B0511.6 - Caenorhabditis elegans
(571 aa)

Score: 531 bits (1367), Expect: 3.55784e-149
Length: 511, Idn/Pos/Gap = 271/362/30 (53%/70%/5%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRD 249
           +H +E+      S  LT   F SL   ++   L+ ++ +GF  MTEIQA++I   L G+D
Sbjct:  48 KHQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKD 107

Query: 250 ILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHH 309
           +LASA+TGSGKTLAFL+P +ELL+K  W   NGTG II++PTREL+MQ +GVL +L    
Sbjct: 108 VLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGS 167

Query: 310 HQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRC 369
           + T  +VMGG+NR  E +KL  G +ILVATPGRLLDHLQ+T  F+  +++ L+IDEADR 
Sbjct: 168 NLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRI 227

Query: 370 LEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVE 429
           L+IGFE EM ++LR LPK RQ+MLFSAT + KV++L K++    P+ + +  +   ATVE
Sbjct: 228 LDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEEATVE 287

Query: 430 GLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGK 489
           GLQQG+ + PS++R  LLFTFLK+N+ KK++VF SSCN VKF+ ELLNYID+P + +HGK
Sbjct: 288 GLQQGYIVAPSDKRLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGK 347

Query: 490 QKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR 549
           QKQ KRT+TFF+F + E   LLCTDVAARGLDIPAVDWIVQYDP DEP+EYIHRVGRTAR
Sbjct: 348 QKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTAR 407

Query: 550 GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKS 609
           G +G G+A+L L P E+GFL++L+ AKV LNE+EF   K+A+IQ+QLE L+  NYYL KS
Sbjct: 408 GTNGSGKALLVLRPEELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYLNKS 467

Query: 610 ARDGFRSYLQAYASHS---------------------------MKDVFNVHELDIAAVAK 642
           A++ ++ YL+AY SHS                           +KD+F+V  +D+ AV+K
Sbjct: 468 AKEAYKCYLRAYDSHSLKVIHKVQMMTYETNCHGVSRCPATKYLKDIFDVTNMDLTAVSK 527

Query: 643 SFGFSAPPRICLDVLERAK-KIRRRGGGGGF 672
           SFGFS PP + L +  + K +IR +  G G+
Sbjct: 528 SFGFSVPPFVDLPISNKPKVEIRSKLSGAGY 558

gb|EAL44993.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
(542 aa)

Score: 530 bits (1366), Expect: 4.41978e-149
Length: 489, Idn/Pos/Gap = 262/363/2 (53%/74%/0%)

Query: 177 EVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEI 236
           E T K         S+  +E++    +S  LT   + SL LSE   + +EE G+ +MT I
Sbjct:  48 ERTNKEEINQNKTKSKEENEEKTKGTTSSFLTDIEYKSLNLSEEIQKALEEAGYTKMTTI 107

Query: 237 QARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAM 296
           QAR+IPL L G+DI+A ARTGSGKTLAFLIPIVE+L K  +  RNGTGAIII+PTRELA+
Sbjct: 108 QARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAI 167

Query: 297 QIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFE 356
           Q F VL  + +H  +TR +++GG++++ E E L  G +I+VATPGRLLDH+ +T+ F++ 
Sbjct: 168 QTFDVLEKILAHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGRLLDHIINTKCFIYR 227

Query: 357 HLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLH 416
           +L+ LVIDEADR +E+GFEEEM +IL  LPK RQTMLFSATQ+ KV+D+A +S +Q P+ 
Sbjct: 228 NLKCLVIDEADRIMEVGFEEEMRQILNRLPKNRQTMLFSATQSEKVDDIANISLKQ-PVV 286

Query: 417 LGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELL 476
           + ++++  ++T   L+QG+ ++ ++ RFRLL+TFL++N+ KK IVFMSSC  VKFY++LL
Sbjct: 287 INVESQSTISTSSKLEQGYVLIEAKDRFRLLYTFLRKNKNKKTIVFMSSCKAVKFYSDLL 346

Query: 477 NYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDE 536
           NYID+PV  LHG+  Q KRT  FFEF + + A L+ TD+AARGLDIPAVDWI+Q D PD 
Sbjct: 347 NYIDIPVKALHGQLDQDKRTKVFFEFCKAKEAILITTDIAARGLDIPAVDWIIQVDLPDS 406

Query: 537 PKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQL 596
           PK+YIHRVGRTAR    +GRA+LF+ P E+  L++L+  K+PL +YE P++K+A+IQ +L
Sbjct: 407 PKDYIHRVGRTARA-DTKGRALLFVQPCEIRILEYLKGEKIPLTQYEVPEKKIANIQREL 465

Query: 597 EKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           EKLVE NYYL   A+DG+++Y+ AY S S+KDVFNV++LDI  +A SFG + PP++ L++
Sbjct: 466 EKLVEKNYYLNTEAKDGYKAYIMAYNSRSLKDVFNVNDLDIGGLALSFGLTNPPKVQLNI 525

Query: 657 LERAKKIRR 665
           L+  K   R
Sbjct: 526 LKAPKSSTR 534

emb|CAA16673.1| DEAD box ATP dependent helicase protein [Arabidopsis thaliana]
dbj|BAB11137.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
ref|NP_201391.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
gb|AAL24412.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gb|AAN65075.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
pir||T05883 ATP-dependent helicase F6H11.20 - Arabidopsis thaliana
(633 aa)

Score: 522 bits (1345), Expect: 1.16411e-146
Length: 454, Idn/Pos/Gap = 256/341/2 (56%/75%/0%)

Query: 204 SGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLA 263
           + ++T   F+SL LS+ T + I+EMGFARMT+IQA+AIP  + G D+L +ARTGSGKTLA
Sbjct: 148 TSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLA 207

Query: 264 FLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
           FLIP VELLY+ K+ PRNGTG ++I PTRELA+Q +GV  +L  +H QT   V+GG  R+
Sbjct: 208 FLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRK 267

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
           TEAE L  G N+LVATPGRLLDHL++T GF+F++L+FLV+DEADR LE  FEE++ +IL 
Sbjct: 268 TEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILN 327

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
           +LPKTRQT LFSATQ+ KVEDLA+VS    P+++ +D  +   T EGL+QG+ +VPS  R
Sbjct: 328 LLPKTRQTSLFSATQSAKVEDLARVSLTS-PVYIDVDEGRKEVTNEGLEQGYCVVPSAMR 386

Query: 444 FRLLFTFLKRNQ-RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEF 502
              L TFLKR Q +KKI+VF S+C   KF+AEL  YI    L++ G   Q+KRT TF +F
Sbjct: 387 LLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQF 446

Query: 503 ARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLL 562
            + E   LLCT+VAARGLD P VDWIVQYDPPD P +YIHRVGRTARG   +G+A+L L 
Sbjct: 447 IKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLT 506

Query: 563 PSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYA 622
           P E+ F+Q+L+ AK+P+ E+EF ++KL D++  +E L+  NY L++SA++ +++Y+  Y 
Sbjct: 507 PQELKFIQYLKAAKIPVEEHEFEEKKLLDVKPFVENLISENYALKESAKEAYKTYISGYD 566

Query: 623 SHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           SHSMKDVFNVH+L++  VA SFGFS PP++ L +
Sbjct: 567 SHSMKDVFNVHQLNLTEVATSFGFSDPPKVALKI 600

dbj|BAD54613.1| putative myc-regulated DEAD/H box 18 RNA helicase [Oryza sativa (japonica cultivar-group)]
(590 aa)

Score: 522 bits (1344), Expect: 1.69457e-146
Length: 527, Idn/Pos/Gap = 268/369/40 (50%/70%/7%)

Query: 206 LLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFL 265
           +LT   F  LP+S+ T   I +M +  +TEIQAR+IP  + G D++ASA+TGSGKTLAFL
Sbjct:  82 ILTDKLFSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFL 141

Query: 266 IPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTE 325
           IP +ELL + ++ PRNGTG I++ PTRELA+Q   V  +L  +H QT   V+GG + R E
Sbjct: 142 IPAIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGE 201

Query: 326 AEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
           AE+L  G N+LVATPGRLLDH+Q T+ F +E L+ L+IDEADR LE  FEE+M +I ++L
Sbjct: 202 AEQLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLL 261

Query: 386 PKT-RQTMLFSATQTTKVEDLAKVSF------QQKPLHLGIDAEQPVATVEGLQQGFTIV 438
           P+  RQT+LFSATQT KVED AK++F      Q+  +++G+D  +  ATVEGL+QG+ ++
Sbjct: 262 PRQGRQTVLFSATQTEKVEDFAKLTFGSKEERQRTLVYVGVDDHESKATVEGLKQGYCVI 321

Query: 439 PSEQRFRLLFTFLKR--NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRT 496
           PSE+RF +L+ FLK+  +++ K++VF SSCN VKF+A+LLN+I +   D+HG+ KQ +RT
Sbjct: 322 PSERRFLVLYAFLKKALSEKTKVMVFFSSCNSVKFHAQLLNFIQIECYDIHGQLKQHQRT 381

Query: 497 STFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGR 556
           STFF+F + EH  LLCT+VAARGLDIP VD+IVQYDPPDE K+YIHRVGRTARG +G+G 
Sbjct: 382 STFFKFHKAEHGILLCTNVAARGLDIPDVDYIVQYDPPDETKDYIHRVGRTARGDNGKGS 441

Query: 557 AILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQL--------EKLVEGNYYLQK 608
           AILFLLP E+  L HL+ A + ++EY F +E +  +Q  L        EK+V GNY L +
Sbjct: 442 AILFLLPKELQLLIHLKAANISVSEYVFRQELVPKLQPYLHYDSSFEQEKIVGGNYILNR 501

Query: 609 SARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGG 668
           SA++ ++SYL AY SHSMKD+F +H+LD+ +VA SF FS PP++ LD+   A K R+   
Sbjct: 502 SAKEAYKSYLLAYKSHSMKDIFAIHQLDLTSVAASFCFSEPPKVNLDLESSASKHRK--- 558

Query: 669 GGGFGDEWKNRDRLKDLIRKRLASGQR--FRASNPHGKRDEQDRRQF 713
                             ++ + +G+R     SNP+G++   DRRQF
Sbjct: 559 ------------------KRNVNTGRRHGIGPSNPYGRKGSDDRRQF 587

ref|XP_577779.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Rattus norvegicus]
(548 aa)

Score: 517 bits (1331), Expect: 6.17804e-145
Length: 450, Idn/Pos/Gap = 255/351/20 (56%/78%/4%)

Query: 176 PEVTQK------SSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMG 229
           PE+ +K      + P  +   +E ++E  + +P  G+           +E TL+ IEEMG
Sbjct:  76 PELKKKRKIGNDAEPDTKKAKTEESTEARE-EPEDGV-----------NENTLKAIEEMG 123

Query: 230 FARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIA 289
           F  MTEIQ ++I   L GRD+LA+A+TGSGKTL FLIP++EL+ K K+MPRNGTG +I++
Sbjct: 124 FKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLTFLIPVIELIVKLKFMPRNGTGVLILS 183

Query: 290 PTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQS 349
           PTRELAMQ FGVL +L +HH  T  ++MGG+NR  E +KL+NG NI++ATPGRLLDH+Q+
Sbjct: 184 PTRELAMQTFGVLKELRTHHVHTYGLIMGGSNRSAEVQKLLNGINIVLATPGRLLDHMQN 243

Query: 350 TRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVS 409
           T GF +++L+ LVIDEADR L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S
Sbjct: 244 TPGFTYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTMLFSATQTRKVEDLARIS 303

Query: 410 FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGV 469
            +++PL++G+D  + VATV+GL+QG+ + PSE+RF LLFTFLK N+ KK++VF SSC  V
Sbjct: 304 LKKEPLYMGVDDNKEVATVDGLEQGYVVYPSEKRFLLLFTFLK-NREKKVMVF-SSCMLV 361

Query: 470 KFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIV 529
           K++ ELLNYID+PVL +HG+QKQ+KRT+TFF+F   +   LLCTDVAARGLDIP +DWIV
Sbjct: 362 KYHYELLNYIDLPVLAIHGQQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEMDWIV 421

Query: 530 QYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKL 589
           QYDPPD+PKEYIHRVGRTA+G++GRG ++L L P E+GFL++L+ +K PL++++F   K+
Sbjct: 422 QYDPPDDPKEYIHRVGRTAQGLNGRGHSLLILGPEELGFLRYLKQSKFPLSQFDFSWSKV 481

Query: 590 ADIQTQLEKLVEGNYYLQKSARDGFRSYLQ 619
           +DIQ+ LEKL+E NY+L KSA++   S L+
Sbjct: 482 SDIQSPLEKLIEKNYFLHKSAQEAHSSKLK 511

gb|AAF68546.1| helicase pitchoune [Drosophila simulans]
gb|AAF68544.1| helicase pitchoune [Drosophila simulans]
gb|AAF68543.1| helicase pitchoune [Drosophila simulans]
gb|AAF68541.1| helicase pitchoune [Drosophila simulans]
(375 aa)

Score: 511 bits (1317), Expect: 2.29028e-143
Length: 374, Idn/Pos/Gap = 231/305/0 (61%/81%/0%)

Query: 276 KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNI 335
           ++MPRNGTG III+PTREL+MQ FGVL +L +HHH T  +VMGG+NR+ E+EKL  G NI
Sbjct:   2 RFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINI  61

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           LVATPGRLLDHLQ++  F++++L+ L+IDE DR LEIGFEEE+ +I+ +LPK RQTMLFS
Sbjct:  62 LVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFS 121

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           ATQT ++E L+K++ + +P+++G+   Q  ATV+GL+QG+ + PSE+R  +LFTFLK+N+
Sbjct: 122 ATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNR 181

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
           +KK++VF SSC  VK++ EL NYID+PV  +HGKQKQ+KRT+TFF+F   E   LLCTDV
Sbjct: 182 KKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDV 241

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDA 575
           AARGLDIP VDWIVQYDPPD+P+EYIHRVGRTARG    G A+L + P E+GFL++L+ A
Sbjct: 242 AARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAA 301

Query: 576 KVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHEL 635
           KVPLNE+EF  +K+ADIQ QLEKL+  NY+L +SA++ F+SY++AY SH +K +FNV+ L
Sbjct: 302 KVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTL 361

Query: 636 DIAAVAKSFGFSAP 649
           D+ AVAKSFGF  P
Sbjct: 362 DLQAVAKSFGFLVP 375

gb|AAF68547.1| helicase pitchoune [Drosophila simulans]
(375 aa)

Score: 511 bits (1317), Expect: 2.42803e-143
Length: 374, Idn/Pos/Gap = 231/305/0 (61%/81%/0%)

Query: 276 KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNI 335
           ++MPRNGTG III+PTREL+MQ FGVL +L +HHH T  +VMGG+NR+ E+EKL  G NI
Sbjct:   2 RFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINI  61

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           LVATPGRLLDHLQ++  F++++L+ L+IDE DR LEIGFEEE+ +I+ +LPK RQTMLFS
Sbjct:  62 LVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFS 121

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           ATQT ++E L+K++ + +P+++G+   Q  ATV+GL+QG+ + PSE+R  +LFTFLK+N+
Sbjct: 122 ATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNR 181

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
           +KK++VF SSC  VK++ EL NYID+PV  +HGKQKQ+KRT+TFF+F   E   LLCTDV
Sbjct: 182 KKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDV 241

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDA 575
           AARGLDIP VDWIVQYDPPD+P+EYIHRVGRTARG    G A+L + P E+GFL++L+ A
Sbjct: 242 AARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAA 301

Query: 576 KVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHEL 635
           KVPLNE+EF  +K+ADIQ QLEKL+  NY+L +SA++ F+SY++AY SH +K +FNV+ L
Sbjct: 302 KVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKXIFNVNTL 361

Query: 636 DIAAVAKSFGFSAP 649
           D+ AVAKSFGF  P
Sbjct: 362 DLQAVAKSFGFLVP 375

gb|AAF68545.1| helicase pitchoune [Drosophila simulans]
(375 aa)

Score: 509 bits (1312), Expect: 9.61956e-143
Length: 374, Idn/Pos/Gap = 231/304/0 (61%/81%/0%)

Query: 276 KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNI 335
           ++MPRNGTG III+PTREL+MQ FGVL +L +HHH T  +VMGG+NR+ E+EKL  G NI
Sbjct:   2 RFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINI  61

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           LVATPGRLLDHLQ++  F++++L+ L+IDE DR LEIGFEEE+ +I+ +LPK RQTMLFS
Sbjct:  62 LVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFS 121

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           ATQT ++E L+K++ + +P ++G+   Q  ATV+GL+QG+ + PSE+R  +LFTFLK+N+
Sbjct: 122 ATQTARIEALSKLALKSEPNYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNR 181

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
           +KK++VF SSC  VK++ EL NYID+PV  +HGKQKQ+KRT+TFF+F   E   LLCTDV
Sbjct: 182 KKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDV 241

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDA 575
           AARGLDIP VDWIVQYDPPD+P+EYIHRVGRTARG    G A+L + P E+GFL++L+ A
Sbjct: 242 AARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAA 301

Query: 576 KVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHEL 635
           KVPLNE+EF  +K+ADIQ QLEKL+  NY+L +SA++ F+SY++AY SH +K +FNV+ L
Sbjct: 302 KVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTL 361

Query: 636 DIAAVAKSFGFSAP 649
           D+ AVAKSFGF  P
Sbjct: 362 DLQAVAKSFGFLVP 375

gb|AAF68542.1| helicase pitchoune [Drosophila simulans]
(375 aa)

Score: 507 bits (1305), Expect: 5.93075e-142
Length: 374, Idn/Pos/Gap = 230/304/0 (61%/81%/0%)

Query: 276 KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNI 335
           ++MPRNGTG III+PTREL+MQ FGVL +L +HHH T  +VMGG+NR+ E+EKL  G NI
Sbjct:   2 RFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINI  61

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           LVATPGRLLDHLQ++  F++++L+ L+IDE DR LEIGFEEE+ +I+ +LPK RQTMLFS
Sbjct:  62 LVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFS 121

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           ATQT ++E L+K++ + +P+++G+   Q  ATV+GL+QG+ + PSE+R  +LFTFLK+N+
Sbjct: 122 ATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNR 181

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
           +KK++VF SSC  VK++ EL NYID+PV  +HGKQKQ+KRT+TFF+F   E   LL TDV
Sbjct: 182 KKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLXTDV 241

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDA 575
           AARGLDIP VDWIVQYDPPD+P+EYIHRVGRTARG    G A+L + P E+GFL++L+ A
Sbjct: 242 AARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAA 301

Query: 576 KVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHEL 635
           KVPLNE+EF  +K+ADIQ QLEKL+  NY+L +SA++ F+SY++AY SH +K +FNV+ L
Sbjct: 302 KVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTL 361

Query: 636 DIAAVAKSFGFSAP 649
           D+ AVAKSFGF  P
Sbjct: 362 DLQAVAKSFGFLVP 375

emb|CAH78677.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium chabaudi]
(579 aa)

Score: 506 bits (1302), Expect: 1.42427e-141
Length: 449, Idn/Pos/Gap = 231/338/3 (51%/75%/0%)

Query: 208 TPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIP 267
           +  +F+ L + +   +G++E+ F  +TEIQ++ IP  LSG+DIL +A+TGSGKTLAFL+P
Sbjct: 124 SEQKFEDLDICDALKKGLKELNFITLTEIQSKCIPHFLSGKDILGAAKTGSGKTLAFLVP 183

Query: 268 IVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
            + +LY  K++P+NGTG +II+PTREL +QI+ V  DL  +  QT  I++GG +R  E +
Sbjct: 184 SINILYNIKFLPKNGTGVLIISPTRELCLQIYQVCTDLCKYIPQTNGIIIGGVSRNEEKK 243

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           K I+G NIL+ATPGRLLDH+Q+T+ F +++L  L+IDEADR L+IGFEEE++ I++ LPK
Sbjct: 244 KFIHGINILIATPGRLLDHMQNTKEFNYKNLVCLIIDEADRLLQIGFEEEINLIVKRLPK 303

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQT LFSATQTTKVE L ++S Q KP+   I+    +ATVE LQQG+ +V  ++RF LL
Sbjct: 304 KRQTALFSATQTTKVESLIRLSLQ-KPIF--IEVTTKIATVERLQQGYALVDEDKRFLLL 360

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
           FTFLKRN  KKI+VF ++C  V+FY +LLNYID+P   +HGK+KQ++R  +F EF+  ++
Sbjct: 361 FTFLKRNPSKKIMVFFNNCMSVQFYNDLLNYIDIPTFCIHGKKKQNQRLKSFNEFSAAKN 420

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVG 567
           A LLCT+VAARGLDIP V++I+QYDPPD+ KEYIHRVGRT RG    G AI+FL+  E+ 
Sbjct: 421 AILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIHRVGRTCRGNDSAGSAIIFLMKHELK 480

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
           FL +L+   +P+N++ + ++KL +IQ+Q+E +V  N++L K AR+ F+SYL  Y ++++K
Sbjct: 481 FLNYLKFYNIPVNQFAYDQKKLINIQSQMESIVTKNFHLHKMAREAFKSYLNGYVTYALK 540

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRICLDV 656
           DVF+++ L++   +K+FG   PP++ L++
Sbjct: 541 DVFDINNLNLMLTSKNFGLDTPPKVDLNL 569

gb|EAA10183.2| ENSANGP00000013137 [Anopheles gambiae str. PEST]
ref|XP_314700.2| ENSANGP00000013137 [Anopheles gambiae str. PEST]
(375 aa)

Score: 502 bits (1292), Expect: 1.8299e-140
Length: 374, Idn/Pos/Gap = 229/299/0 (61%/79%/0%)

Query: 276 KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNI 335
           ++ PRNG G I+I+PTRELAMQIFGVL +L ++H QT  ++MGGA+R TE EKL  G NI
Sbjct:   2 RFKPRNGAGVIVISPTRELAMQIFGVLKELMTYHCQTYGLLMGGASRHTENEKLEKGINI  61

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           +VATPGRLLDHL+ST  F+F++L+ L+IDE DR LEIGFEE++ +I+ ILPK RQTMLFS
Sbjct:  62 IVATPGRLLDHLKSTPNFLFKNLQCLIIDECDRILEIGFEEDLKQIISILPKKRQTMLFS 121

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           ATQ++++E+L K++ + +P+++G+D  +  ATV GL+QG+ + PSE+R  +LFTFLK+N+
Sbjct: 122 ATQSSRLEELGKLALKSEPIYVGVDDNKKEATVTGLEQGYIVCPSERRLLVLFTFLKKNR 181

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
           +KK++VF SSC  VKF+ EL NYID+PV+ +HGKQKQSKRTS FF+F   E   LLCTDV
Sbjct: 182 KKKVMVFFSSCLSVKFHHELFNYIDLPVMSIHGKQKQSKRTSVFFQFCNAETGILLCTDV 241

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDA 575
           AARGLDIPAVDWIVQYDPP++ KEYIHRVGRTARG    G A+L L P EVGFL++L+ A
Sbjct: 242 AARGLDIPAVDWIVQYDPPNDTKEYIHRVGRTARGEDLCGHALLMLRPEEVGFLKYLKQA 301

Query: 576 KVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHEL 635
           KVPLNE+EF   K+ADIQ QLE L+  NY+L +S +  F++Y++AY  H MKDVFN+  L
Sbjct: 302 KVPLNEFEFSWSKIADIQLQLENLMAKNYFLNQSGKLAFKTYVRAYEGHHMKDVFNIANL 361

Query: 636 DIAAVAKSFGFSAP 649
           D+  VAK+FGF+ P
Sbjct: 362 DLVQVAKNFGFTQP 375

ref|NP_703966.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium falciparum 3D7]
emb|CAG25121.1| DEAD/DEAH box ATP-dependent RNA helicase, putative; putative DEAD/DEAH box ATP-dependent RNA helicase [Plasmodium falciparum 3D7]
(601 aa)

Score: 501 bits (1291), Expect: 2.19861e-140
Length: 442, Idn/Pos/Gap = 229/331/3 (51%/74%/0%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F+ L + +   +G++E+ F  +TEIQA+ IP  LSG+DIL +A+TGSGKTLAFL+P + 
Sbjct: 149 KFEELNICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVPSIN 208

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           +LY  K++P+NGTG +II+PTREL +QI+ V  DL  +  QT  I++GG +R  E +K I
Sbjct: 209 ILYNIKFLPKNGTGVLIISPTRELCLQIYQVCKDLCKYIPQTNGIIIGGMSRNEEKKKFI 268

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +G NIL+ATPGRLLDH+Q+T+ F++++L  L+IDEADR L+IGFEEE++ I++ LPK RQ
Sbjct: 269 HGINILIATPGRLLDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRLPKKRQ 328

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T LFSATQTTKVE L ++S Q KP+   I+    +ATVE LQQG+ +V  ++RF LLFTF
Sbjct: 329 TALFSATQTTKVESLIRLSLQ-KPIF--IEVTTKIATVERLQQGYALVDEDKRFLLLFTF 385

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LK+N  KKI+VF ++C  V+FY +LLNYID+P   +HGK+KQ+KR  +F +F+  + A L
Sbjct: 386 LKKNMSKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQNKRLKSFHDFSAAKCAIL 445

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           LCT+VAARGLDIP V++I+QYDPPD+ KEYIHRVGRT RG    G AI+FL+  E+ FL 
Sbjct: 446 LCTNVAARGLDIPNVNYIIQYDPPDDSKEYIHRVGRTCRGQDSNGSAIIFLMKHELKFLN 505

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF 630
           +L+   +P+N++ +   KL +IQ+ ++ +V  N++L K AR+ F+SYL  Y ++++KDVF
Sbjct: 506 YLKFYNIPINQFAYDPNKLINIQSHIQSIVTKNFHLHKMAREAFKSYLNGYITYALKDVF 565

Query: 631 NVHELDIAAVAKSFGFSAPPRI 652
           +V+ L++   +K+FG   PP++
Sbjct: 566 DVNNLNLLLTSKNFGLEVPPKV 587

dbj|BAC03616.1| unnamed protein product [Homo sapiens]
(408 aa)

Score: 493 bits (1268), Expect: 1.08272e-137
Length: 363, Idn/Pos/Gap = 222/303/0 (61%/83%/0%)

Query: 294 LAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGF 353
           +  + FGVL +L +HH  T  ++MGG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF
Sbjct:   1 MEQESFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGF  60

Query: 354 VFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQK 413
           ++++L+ LVIDEADR L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S +++
Sbjct:  61 MYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKE 120

Query: 414 PLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYA 473
           PL++G+D ++  ATV+GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK++ 
Sbjct: 121 PLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHY 180

Query: 474 ELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDP 533
           ELLNYID+PVL +HGKQKQ+KRT+TFF+F   +  TLLCTDVAARGLDIP VDWIVQYDP
Sbjct: 181 ELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDP 240

Query: 534 PDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQ 593
           PD+PKEYIHRVGRTARG++GRG A+L L P E+GFL++L+ +KVPL+E++F   K++ IQ
Sbjct: 241 PDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISYIQ 300

Query: 594 TQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRIC 653
           +QLEKL+E NY+L KSA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + 
Sbjct: 301 SQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVD 360

Query: 654 LDV 656
           L+V
Sbjct: 361 LNV 363

ref|XP_597469.1| PREDICTED: similar to ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb), partial [Bos taurus]
(495 aa)

Score: 471 bits (1213), Expect: 2.73839e-131
Length: 415, Idn/Pos/Gap = 231/314/47 (55%/75%/11%)

Query: 249 DILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH 308
           D+LA+A+TGSGKTLAFLIP VEL+ K K+MPRNGTG +I++PTRELAMQ FGVL +L +H
Sbjct:   9 DLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTH  68

Query: 309 HHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADR 368
           H  T  ++MGG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR
Sbjct:  69 HVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADR 128

Query: 369 CLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATV 428
            L++GFEEE+ +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++  ATV
Sbjct: 129 ILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATV 188

Query: 429 EGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHG 488
           +GL+QG+ + PSE+RF LLFTFLK+N++KK++VF SS +G+                   
Sbjct: 189 DGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSYSGI------------------- 229

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEY-IHR---- 543
                                LLCTDVAARGLDIP VDWIVQYDPPD+PK + +H+    
Sbjct: 230 ---------------------LLCTDVAARGLDIPEVDWIVQYDPPDDPKVFSLHQRSTF 268

Query: 544 --VGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVE 601
             VGRTARG++GRG A+L L P E+GFL++L+ +KVPL+E+EF   K++DIQ+QLEKL+E
Sbjct: 269 TVVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIE 328

Query: 602 GNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDV 656
            NY+L KSA++ ++SY++AY SHS+K +FNV+ L++  VA SFGF  PP + L+V
Sbjct: 329 KNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNV 383

emb|CAG11213.1| unnamed protein product [Tetraodon nigroviridis]
(574 aa)

Score: 469 bits (1207), Expect: 1.21935e-130
Length: 464, Idn/Pos/Gap = 239/329/53 (51%/70%/11%)

Query: 196 EQEQPKPSSGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILAS 253
           + E P   +G      F SL   +SE TL+G++E+GF  MTEIQ + I   L GRD+LA+
Sbjct:  45 QPELPSGLTGAFEDTSFASLAELVSENTLKGVKELGFEHMTEIQHKTIRPLLEGRDVLAA 104

Query: 254 ARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTR 313
           A+TGSGKTLAFLIP +EL+YK K+MPRNGTG II++PTRELAMQ +GV+ +L +HH  T 
Sbjct: 105 AKTGSGKTLAFLIPCIELIYKLKFMPRNGTGVIILSPTRELAMQTYGVMKELMTHHVHTY 164

Query: 314 AIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG 373
            ++MGG+NR  EA+KL NG NILVATPGRLLDHLQ+T GF+F++L+ L+IDEADR LE+G
Sbjct: 165 GLIMGGSNRSAEAQKLANGINILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVG 224

Query: 374 FEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQ 433
           FEEE+ +I+++LPK RQTMLFSATQT +VEDLA++S +++PL++G+D ++  ATV+GL+Q
Sbjct: 225 FEEELKQIIKLLPKRRQTMLFSATQTRRVEDLARISLKKEPLYVGVDDDKEKATVDGLEQ 284

Query: 434 GFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQS 493
           G+ + PSE+RF LLFTFLK+N++KK++VF SSC  VK++ ELLNYID+PV+ +H    + 
Sbjct: 285 GYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVMAIHEYIHRV 344

Query: 494 KRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHG 553
            RT                    ARG++                               G
Sbjct: 345 GRT--------------------ARGIE-------------------------------G 353

Query: 554 RGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDG 613
           RG A+L L P E+GFL++L+ AKVPL+E+EF   K++DIQ+QLEKL+E NYYL KSA++ 
Sbjct: 354 RGHALLILRPEELGFLRYLKQAKVPLSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQEA 413

Query: 614 FRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVL 657
           ++SY++AY SHS+K ++NV+ L++  VA SFGF  PP + L +L
Sbjct: 414 YKSYVRAYDSHSLKQIYNVNTLNLLMVALSFGFKVPPYVDLSIL 457

gb|EAA18812.1| probable ATP-dependent RNA helicase has1 [Plasmodium yoelii yoelii]
(649 aa)

Score: 467 bits (1202), Expect: 4.4442e-130
Length: 438, Idn/Pos/Gap = 220/321/3 (50%/73%/0%)

Query: 181 KSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARA 240
           K+    +S++ ++ +   +        +  +F+ L + +   +G++E+ F  +TEIQ++ 
Sbjct: 198 KNGEGEKSINYKNCAISNKKSEKENFYSEQKFEDLDICDALKKGLKELNFITLTEIQSKC 257

Query: 241 IPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFG 300
           IP  L+G+DIL +A+TGSGKTLAFL+P + +LY  K++P+NGTG +II+PTREL +QI+ 
Sbjct: 258 IPHFLNGKDILGAAKTGSGKTLAFLVPSIHILYNIKFLPKNGTGVLIISPTRELCLQIYQ 317

Query: 301 VLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRF 360
           V  DL  +  QT  I++GG +R  E +K I+G NIL+ATPGRLLDH+Q+T+ F +++L  
Sbjct: 318 VCTDLCKYIPQTNGIIIGGVSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFNYKNLVC 377

Query: 361 LVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGID 420
           L+IDEADR L+IGFEEE++ I++ LPK RQT LFSATQTTKVE L ++S Q KP+   I+
Sbjct: 378 LIIDEADRLLQIGFEEEINLIVKRLPKKRQTALFSATQTTKVESLIRLSLQ-KPIF--IE 434

Query: 421 AEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYID 480
               +ATVE LQQG+ +V  ++RF LLFTFLKRN  KKI+VF ++C  V+FY +LLNYID
Sbjct: 435 VTTKIATVERLQQGYALVDEDKRFLLLFTFLKRNTSKKIMVFFNNCMSVQFYNDLLNYID 494

Query: 481 VPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEY 540
           +P   +HGK+KQ++R  +F EF+  ++A LLCT+VAARGLDIP V++I+QYDPPD+ KEY
Sbjct: 495 IPTFCIHGKKKQNQRLKSFNEFSAAKNAILLCTNVAARGLDIPNVNYIIQYDPPDDSKEY 554

Query: 541 IHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLV 600
           IHRVGRT RG    G AI+FL+  E+ FL +L+   +P+N++ + ++KL +IQ+Q+E +V
Sbjct: 555 IHRVGRTCRGNDSAGSAIIFLMKHELKFLNYLKFYNIPVNQFSYDQKKLINIQSQMESIV 614

Query: 601 EGNYYLQKSARDGFRSYL 618
             N++L K AR+ F+SYL
Sbjct: 615 TKNFHLHKMAREAFKSYL 632

ref|XP_397167.1| similar to CG6375-PB [Apis mellifera]
(375 aa)

Score: 437 bits (1125), Expect: 3.83443e-121
Length: 313, Idn/Pos/Gap = 201/258/0 (64%/82%/0%)

Query: 283 TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGR 342
           TG +II+PTREL+MQ FGVL +L  +HH T  ++MGGANR+TEA+KL  G NI+VATPGR
Sbjct:  56 TGCVIISPTRELSMQTFGVLKELMKYHHHTYGLLMGGANRQTEAQKLSKGINIVVATPGR 115

Query: 343 LLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKV 402
           LLDHLQ+T  F++++L+ L+IDEADR L+IGFEEE+ +I+ ILPK RQTMLFSATQT K 
Sbjct: 116 LLDHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKKRQTMLFSATQTKKT 175

Query: 403 EDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVF 462
           E L  ++ +++P+++G+D ++  ATVEGL+QG+ + PSE+RF LLFTFLK+N++KKI+VF
Sbjct: 176 EMLMTLALKKEPVYVGVDDDKEKATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKIMVF 235

Query: 463 MSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDI 522
            SSC  VK++ ELLNYID+PVL +HGKQKQ+KRT+TFF+F       LLCTDVAARGLDI
Sbjct: 236 FSSCMSVKYHHELLNYIDLPVLSIHGKQKQTKRTTTFFQFCNASSGILLCTDVAARGLDI 295

Query: 523 PAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEY 582
           PAVDWIVQYDPPD+PKEYIHRVGRTARG    G A+L L P E+GFL++L+ AKVP+NE+
Sbjct: 296 PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKVPVNEF 355

Query: 583 EFPKEKLADIQTQ 595
           +F   K+ADIQ Q
Sbjct: 356 DFSWNKIADIQLQ 368

emb|CAC26990.1| putative RNA-dependent helicase [Guillardia theta]
pir||E90105 putative RNA-dependent helicase [imported] - Guillardia theta nucleomorph
ref|NP_113422.1| putative RNA-dependent helicase [Guillardia theta]
(469 aa)

Score: 423 bits (1088), Expect: 8.55213e-117
Length: 440, Idn/Pos/Gap = 194/298/1 (44%/67%/0%)

Query: 206 LLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFL 265
           L+T H F+   LS+ T+  I E  F  +T+IQ+ +IP  + G DI+ S+ TGSGKTLAFL
Sbjct:  28 LITFHTFEVFKLSKMTIFKILENSFTHLTKIQSVSIPFQICGFDIIGSSSTGSGKTLAFL  87

Query: 266 IPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTE 325
           IP +E L+  KW    GT  III+PTRELA+Q + +  D ++ H     +++GG+N+++E
Sbjct:  88 IPSIEFLHTTKWKSSLGTAIIIISPTRELAVQTYYIFKDFSTIHQYRYGLMIGGSNKKSE 147

Query: 326 AEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
            EK+  G +I + TPGRLLDHL + + F F +L+ L+IDEADRCLE+GFE+E+  IL ++
Sbjct: 148 TEKVSTGLDIAICTPGRLLDHLNTNKNFKFHNLQILIIDEADRCLEVGFEDEIKNILILI 207

Query: 386 PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR 445
           PK +QT++FSATQT  +++L  ++F  KP+ +G +  +   +     QGF I   + +F 
Sbjct: 208 PKKKQTIMFSATQTKSIKNLTNITFISKPIFIG-EYYKISNSRNQTNQGFVITNQDNKFL 266

Query: 446 LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARR 505
            L TFLK+N  KK IVF SSCN VK+Y  +   +++ V++LHGKQKQ KR + FF+F + 
Sbjct: 267 SLITFLKKNFNKKHIVFFSSCNEVKYYTLVSKILNIEVIELHGKQKQYKRIANFFKFCKA 326

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
           +++ L  TDV+ARGLD P VDWI+Q+ PP + KEYIHR+GRT+RG+  +G +++F+ P E
Sbjct: 327 KNSVLFSTDVSARGLDFPLVDWIIQFSPPFDSKEYIHRIGRTSRGIKNQGSSVIFIYPFE 386

Query: 566 VGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHS 625
           +G+L++L + +V L EY+         Q+++ KL+    +L K A+D F SYL++Y ++ 
Sbjct: 387 IGYLKYLENKQVKLFEYKMDMSNFKVFQSKISKLIIKYPFLNKIAKDAFFSYLKSYKNYP 446

Query: 626 MKDVFNVHELDIAAVAKSFG 645
           +K +FN   L++  ++K+FG
Sbjct: 447 IKSIFNAKNLNLELISKNFG 466

ref|XP_518260.1| PREDICTED: similar to ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) (Myc-regulated DEAD-box protein) (MrDb) [Pan troglodytes]
(387 aa)

Score: 402 bits (1033), Expect: 1.98984e-110
Length: 371, Idn/Pos/Gap = 191/264/19 (51%/71%/5%)

Query: 296 MQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVF 355
           MQ FGVL +L +    T  ++MGG+NR  EA+KL NG NI+VATPG LLDH+Q+T GF++
Sbjct:   1 MQTFGVLTELKTCQVHTYGLIMGGSNRSAEAQKLANGINIIVATPGCLLDHMQNTPGFMY  60

Query: 356 EHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPL 415
           ++L+ LVIDEAD  L++GFEEE+ +++++ P  RQTMLFSATQT KVE LA++S +++PL
Sbjct:  61 KNLQCLVIDEADHILDVGFEEELKQVIKLFPTCRQTMLFSATQTRKVEGLARISLKKEPL 120

Query: 416 HLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAEL 475
           + G+D ++  ATV GL +                         ++ F SSC  VK+  EL
Sbjct: 121 YFGVDDDKANATVNGLDKKKQKKK-------------------LMAFFSSCMSVKYPYEL 161

Query: 476 LNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPD 535
           LNYID+P + +HGKQKQ+K T+TFF+F   +  TLLCTDVA RGLDIP VDWIVQYDPPD
Sbjct: 162 LNYIDLPYVAIHGKQKQNKCTTTFFQFCNPDSGTLLCTDVATRGLDIPEVDWIVQYDPPD 221

Query: 536 EPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQ 595
           +PKEYIH VGRTARG++GRG A+L L P  +GFL++L+ +KVPL+  EF   K++DI++Q
Sbjct: 222 DPKEYIHCVGRTARGLNGRGHALLILCPEXLGFLRYLKQSKVPLSLLEFFWSKISDIKSQ 281

Query: 596 LEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLD 655
           LEKL+E NY+L+KSA+  ++ Y+ AY  HS+K +FNV+ L++  VA SFGF   P + L+
Sbjct: 282 LEKLIEKNYFLRKSAQKPYKLYIXAYDYHSLKQIFNVNNLNLPQVALSFGFKVTPFVDLN 341

Query: 656 VLERAKKIRRR 666
           +     K ++R
Sbjct: 342 INCNEAKQKKR 352

gb|EAA38774.1| GLP_47_37459_39102 [Giardia lamblia ATCC 50803]
(547 aa)

Score: 386 bits (991), Expect: 1.61754e-105
Length: 480, Idn/Pos/Gap = 201/303/12 (41%/63%/2%)

Query: 191 SEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDI 250
           +E+A  QE       ++T   F    LS   L  ++ MG   MT IQ  +IP+ LSGR++
Sbjct:  17 TENAKYQE-------IMTETPFSETSLSPFLLEAVDAMGHKNMTRIQEASIPVILSGRNM  69

Query: 251 LASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHH 310
            A A TGSGK+LAFL+P ++L++KA     +GTG I++ PTRELA+Q++ V   L S  +
Sbjct:  70 TAKAHTGSGKSLAFLLPAIDLIHKANMKLHHGTGVIVLTPTRELALQLYNVATQLISATN 129

Query: 311 QTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCL 370
            T  + +GG +R+ EA  L  G ++++ATPGRL DHL +T GF  + L  L++DEAD  L
Sbjct: 130 ITVGLAIGGTSRQKEANHLCKGASVVIATPGRLCDHLNNTPGFKTDKLFMLILDEADMLL 189

Query: 371 EIGFEEEMHEILRIL--PKTRQTMLFSATQTTKVEDLAKVSFQQKPL-HLGIDAEQPVAT 427
           E GF++E+  ILR+L  PK RQ   FSAT + K  ++  +   ++ L  +  D +   AT
Sbjct: 190 EYGFQQELEAILRMLPGPKLRQVCFFSATMSDKCLEVPHMEVDKETLIRINTDVKSSAAT 249

Query: 428 VEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV-PVLDL 486
               +QG+ I P EQRF LL+TF+KR   KKIIVF+SS + V+FY E L +I +  +L L
Sbjct: 250 RAHFEQGYIICPPEQRFLLLYTFMKRRSDKKIIVFLSSRDSVEFYYEFLRFIGMASILML 309

Query: 487 HGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGR 546
            G  KQ +R  T+ +F   +   LL T+VAARGLD+PA+D+++Q+DPP+  + YIHR GR
Sbjct: 310 DGGMKQKQRMETYNKFCNAQSGVLLATNVAARGLDLPAIDYVIQFDPPESVESYIHRAGR 369

Query: 547 TARGVHG-RGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYY 605
             RG  G +G  +LFL+  E  F+  L+   V L E+EFP +K+ ++Q ++E L+   YY
Sbjct: 370 ACRGDTGKKGVGLLFLMSHETKFISFLKAHNVSLFEFEFPADKIINVQAEMENLIATIYY 429

Query: 606 LQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRR 665
           L++ A++ +RS++ AYASH +K VFNV+++D+  + +SFG +  PR+ +  +   K + R
Sbjct: 430 LRRKAQNAYRSFISAYASHHLKKVFNVNKIDLECLGRSFGLTEVPRVDVPGISLYKNMER 489

ref|XP_417158.1| PREDICTED: similar to Ddx10 protein [Gallus gallus]
(1972 aa)

Score: 370 bits (951), Expect: 5.56749e-101
Length: 513, Idn/Pos/Gap = 200/319/17 (38%/62%/3%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
            RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAF++P +
Sbjct:  73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           ELLY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + E+E+ 
Sbjct: 133 ELLYRLQWTSADGLGVLIISPTRELAFQTFKVLRKVGKNHDFSAGLIIGGKDLKEESER- 191

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
           I+  N+L+ TPGRLL H+  T  F    L+ L++DEADR L++GF + M+ I+  LPK R
Sbjct: 192 IHHINMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR 251

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QT+LFSATQT  V+DLA++S +  P ++ +  +   +T   L Q + +   + +  +L++
Sbjct: 252 QTLLFSATQTKSVKDLARLSLKD-PEYVWVHEKAKFSTPATLDQNYIVCELQHKINVLYS 310

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREH 507
           FL+ + +KK IVF +SC  V++   +   +   +PVL LHGKQ+Q KR   +  F R++ 
Sbjct: 311 FLRSHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCFVRKKA 370

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EV 566
           A L  TD+AARGLD PAV+W++Q+D P++   YIHRVGRTAR   G G A+L LLPS E 
Sbjct: 371 AVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEG-GEALLVLLPSEEK 429

Query: 567 GFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSM 626
           G ++ L   KVP+NE +   EK+ DIQ +++  +  +  L++ A+  F SYL++      
Sbjct: 430 GMVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQDQELKEKAQRCFVSYLRSVYLMKN 489

Query: 627 KDVFNVHELDIAAVAKSFGFSAPPRI-CLDVLERAKKIRRRGGGGGFGDEWKNRDRLKDL 685
           K+VF+V +L +A  A S G +  PR+  L  +++   ++         D  +N++ +  L
Sbjct: 490 KEVFDVFKLPLAEYALSLGLAMAPRVRFLQKVQKQLSVKETSERNPLKDTEQNKNTISSL 549

Query: 686 IRKRLASGQRFRASNPHGK------RDEQDRRQ 712
            ++ +   +     NP GK      ++E++R++
Sbjct: 550 NKEGMEECR----INPSGKLSVNRSKEEENRKE 578

gb|AAH55481.1| Ddx10 protein [Mus musculus]
(623 aa)

Score: 361 bits (927), Expect: 3.61083e-98
Length: 445, Idn/Pos/Gap = 197/287/6 (44%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  12 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE  71

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct:  72 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 130

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F   +L+ LV+DEADR L++GF + M+ I+  LPK RQ
Sbjct: 131 NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQ 190

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + I    Q+  +LF+F
Sbjct: 191 TLLFSATQTKSVKDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSF 249

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   + +L LHG+Q+Q +R   + EF R+  A
Sbjct: 250 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAA 309

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVG 567
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPS E G
Sbjct: 310 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEEQG 368

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
            +Q L   KVP+ E +   EKL D+Q +LE  +  +  L++ A+  F SY+++      K
Sbjct: 369 MVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDK 428

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRI 652
           +VFNV +L I   A S G +  PRI
Sbjct: 429 EVFNVSKLPITEYALSLGLAVAPRI 453

gb|AAH49217.1| DDX10 protein [Homo sapiens]
(745 aa)

Score: 360 bits (923), Expect: 1.05939e-97
Length: 444, Idn/Pos/Gap = 192/287/5 (43%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 130 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 188

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F    L+ LV+DEADR L++GF + M+ ++  LPK RQ
Sbjct: 189 NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQ 248

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + +   +Q+  +L++F
Sbjct: 249 TLLFSATQTKSVKDLARLSLKN-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSF 307

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   V +L LHG+Q+Q +R   + EF R+  A
Sbjct: 308 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAA 367

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPSE   
Sbjct: 368 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEKAM 426

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           +Q L   KVP+ E +   EKL D+Q +LE ++  +  L++ A+  F SY+++      K+
Sbjct: 427 VQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKE 486

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
           VF+V +L I   A S G +  PR+
Sbjct: 487 VFDVSKLPIPEYALSLGLAVAPRV 510

gb|AAH23303.1| Ddx10 protein [Mus musculus]
(681 aa)

Score: 359 bits (921), Expect: 1.88404e-97
Length: 445, Idn/Pos/Gap = 197/287/6 (44%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 130 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 188

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F   +L+ LV+DEADR L++GF + M+ I+  LPK RQ
Sbjct: 189 NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQ 248

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + I    Q+  +LF+F
Sbjct: 249 TLLFSATQTKSVKDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSF 307

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   + +L LHG+Q+Q +R   + EF R+  A
Sbjct: 308 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAA 367

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVG 567
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPS E G
Sbjct: 368 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEEQG 426

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
            +Q L   KVP+ E +   EKL D+Q +LE  +  +  L++ A+  F SY+++      K
Sbjct: 427 MVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDK 486

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRI 652
           +VFNV +L I   A S G +  PRI
Sbjct: 487 EVFNVSKLPITEYALSLGLAVAPRI 511

dbj|BAC35031.1| unnamed protein product [Mus musculus]
(681 aa)

Score: 358 bits (919), Expect: 3.08236e-97
Length: 445, Idn/Pos/Gap = 197/286/6 (44%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 130 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 188

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F   +L+ LV+DEADR L++GF + M+ I+  LPK RQ
Sbjct: 189 NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQ 248

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + I    Q+  +LF+F
Sbjct: 249 TLLFSATQTKSVKDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSF 307

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   +  L LHG+Q+Q +R   + EF R+  A
Sbjct: 308 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISTLALHGRQQQMRRMEVYNEFVRKRAA 367

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVG 567
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPS E G
Sbjct: 368 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEEQG 426

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
            +Q L   KVP+ E +   EKL D+Q +LE  +  +  L++ A+  F SY+++      K
Sbjct: 427 MVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDK 486

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRI 652
           +VFNV +L I   A S G +  PRI
Sbjct: 487 EVFNVSKLPITEYALSLGLAVAPRI 511

dbj|BAD93121.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 variant [Homo sapiens]
(845 aa)

Score: 357 bits (916), Expect: 7.04085e-97
Length: 444, Idn/Pos/Gap = 192/287/5 (43%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  80 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 139

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 140 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 198

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F    L+ LV+DEADR L++GF + M+ ++  LPK RQ
Sbjct: 199 NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQ 258

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + +   +Q+  +L++F
Sbjct: 259 TLLFSATQTKSVKDLARLSLKN-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSF 317

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   V +L LHG+Q+Q +R   + EF R+  A
Sbjct: 318 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAA 377

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPSE   
Sbjct: 378 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEKAM 436

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           +Q L   KVP+ E +   EKL D+Q +LE ++  +  L++ A+  F SY+++      K+
Sbjct: 437 VQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKE 496

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
           VF+V +L I   A S G +  PR+
Sbjct: 497 VFDVSKLPIPEYALSLGLAVAPRV 520

gb|AAC50823.1| similar to DEAD box RNA helicases
sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 (DEAD-box protein 10)
prf||2210303A RNA helicase
(875 aa)

Score: 355 bits (911), Expect: 2.90834e-96
Length: 444, Idn/Pos/Gap = 192/287/5 (43%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 130 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 188

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F    L+ LV+DEADR L++GF + M+ ++  LPK RQ
Sbjct: 189 NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQ 248

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + +   +Q+  +L++F
Sbjct: 249 TLLFSATQTKSVKDLARLSLKN-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSF 307

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   V +L LHG+Q+Q +R   + EF R+  A
Sbjct: 308 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAA 367

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPSE   
Sbjct: 368 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEKAM 426

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           +Q L   KVP+ E +   EKL D+Q +LE ++  +  L++ A+  F SY+++      K+
Sbjct: 427 VQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKE 486

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
           VF+V +L I   A S G +  PR+
Sbjct: 487 VFDVSKLPIPEYALSLGLAVAPRV 510

gb|AAH91521.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gb|AAH93656.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gb|AAH93654.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
dbj|BAB18536.1| RNA helicase [Homo sapiens]
ref|NP_004389.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
(875 aa)

Score: 355 bits (910), Expect: 3.55314e-96
Length: 444, Idn/Pos/Gap = 192/287/5 (43%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 130 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 188

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F    L+ LV+DEADR L++GF + M+ ++  LPK RQ
Sbjct: 189 NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQ 248

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + +   +Q+  +L++F
Sbjct: 249 TLLFSATQTKSVKDLARLSLKN-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSF 307

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   V +L LHG+Q+Q +R   + EF R+  A
Sbjct: 308 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAA 367

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPSE   
Sbjct: 368 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEKAM 426

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           +Q L   KVP+ E +   EKL D+Q +LE ++  +  L++ A+  F SY+++      K+
Sbjct: 427 VQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKE 486

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
           VF+V +L I   A S G +  PR+
Sbjct: 487 VFDVSKLPIPEYALSLGLAVAPRV 510

gb|AAH49261.1| Ddx10 protein [Mus musculus]
(891 aa)

Score: 354 bits (908), Expect: 6.42526e-96
Length: 445, Idn/Pos/Gap = 197/287/6 (44%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  86 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 145

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 146 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 204

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F   +L+ LV+DEADR L++GF + M+ I+  LPK RQ
Sbjct: 205 NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQ 264

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + I    Q+  +LF+F
Sbjct: 265 TLLFSATQTKSVKDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSF 323

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   + +L LHG+Q+Q +R   + EF R+  A
Sbjct: 324 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAA 383

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVG 567
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPS E G
Sbjct: 384 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEEQG 442

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
            +Q L   KVP+ E +   EKL D+Q +LE  +  +  L++ A+  F SY+++      K
Sbjct: 443 MVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDK 502

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRI 652
           +VFNV +L I   A S G +  PRI
Sbjct: 503 EVFNVSKLPITEYALSLGLAVAPRI 527

emb|CAG32137.1| hypothetical protein [Gallus gallus]
(875 aa)

Score: 353 bits (906), Expect: 1.02521e-95
Length: 513, Idn/Pos/Gap = 200/319/17 (38%/62%/3%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
            RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAF++P +
Sbjct:  73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           ELLY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + E+E+ 
Sbjct: 133 ELLYRLQWTSADGLGVLIISPTRELAFQTFKVLRKVGKNHDFSAGLIIGGKDLKEESER- 191

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
           I+  N+L+ TPGRLL H+  T  F    L+ L++DEADR L++GF + M+ I+  LPK R
Sbjct: 192 IHHINMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR 251

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QT+LFSATQT  V+DLA++S +  P ++ +  +   +T   L Q + +   + +  +L++
Sbjct: 252 QTLLFSATQTKSVKDLARLSLKD-PEYVWVHEKAKFSTPATLDQNYIVCELQHKINVLYS 310

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREH 507
           FL+ + +KK IVF +SC  V++   +   +   +PVL LHGKQ+Q KR   +  F R++ 
Sbjct: 311 FLRSHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCFVRKKA 370

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EV 566
           A L  TD+AARGLD PAV+W++Q+D P++   YIHRVGRTAR   G G A+L LLPS E 
Sbjct: 371 AVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEG-GEALLVLLPSEEK 429

Query: 567 GFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSM 626
           G ++ L   KVP+NE +   EK+ DIQ +++  +  +  L++ A+  F SYL++      
Sbjct: 430 GMVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQDQELKEKAQRCFVSYLRSVYLMKN 489

Query: 627 KDVFNVHELDIAAVAKSFGFSAPPRI-CLDVLERAKKIRRRGGGGGFGDEWKNRDRLKDL 685
           K+VF+V +L +A  A S G +  PR+  L  +++   ++         D  +N++ +  L
Sbjct: 490 KEVFDVFKLPLAEYALSLGLAMAPRVRFLQKVQKQLSVKETSERNPLKDTEQNKNTISSL 549

Query: 686 IRKRLASGQRFRASNPHGK------RDEQDRRQ 712
            ++ +   +     NP GK      ++E++R++
Sbjct: 550 NKEGMEECR----INPSGKLSVNRSKEEENRKE 578

gb|EAA57080.1| hypothetical protein MG08049.4 [Magnaporthe grisea 70-15]
ref|XP_362466.1| hypothetical protein MG08049.4 [Magnaporthe grisea 70-15]
(798 aa)

Score: 352 bits (903), Expect: 2.52446e-95
Length: 501, Idn/Pos/Gap = 207/303/23 (41%/60%/4%)

Query: 208 TPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIP 267
           TP  F  LPLSEPT +G+ +  F  +T+IQARAIPLAL GRDIL +A+TGSGKTLAFL+P
Sbjct:  47 TPKAFAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVP 106

Query: 268 IVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           ++E LY+ +W      GA++++PTRELA+Q F VL  +  HH  +  +V+GG + R EAE
Sbjct: 107 LLEKLYREQWTQEAKLGALVLSPTRELAVQTFQVLRKIGRHHLFSAGLVIGGKSVREEAE 166

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
            L +  NIL+ TPGR+L HL  T GF  ++L+ LV+DEADR +++GF+ ++  +++ LP 
Sbjct: 167 AL-SRMNILIGTPGRILQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQHLPT 225

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
           TRQT+LFSATQ+ KV DLA++S +  P ++ + AE   AT   LQQ + + P  ++   L
Sbjct: 226 TRQTLLFSATQSKKVSDLARLSLKD-PEYVSVHAEATTATPSTLQQHYIVTPLPEKLDTL 284

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARR 505
           + F+K N + K++VF+SS   V+F  E    +   +P+L +HG+QKQ  R      F   
Sbjct: 285 WGFIKANLKSKMVVFLSSGKQVRFVYESFRQMQPGIPLLHMHGRQKQLARLDVTKRFDSS 344

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS- 564
           +HA L  TDV ARG+D   VDW+VQ D P++  +YIHRVGRTAR     G+A++FL PS 
Sbjct: 345 KHACLFATDVIARGIDFTGVDWVVQVDAPEDTDDYIHRVGRTAR-YEREGKAVIFLDPSE 403

Query: 565 EVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH 624
           E G L+ L   KVP+ +      K   I+ +L+ +   ++ ++  A+  F SY +A    
Sbjct: 404 EAGMLKRLERKKVPITKVTAKDSKKKSIRDELQSICWKSHDVKYLAQKAFISYARAVHRA 463

Query: 625 SMKD---------VFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRR-------RGG 668
           + +D         VF   +LD+   AKS G +  P+I     E  K+++         G 
Sbjct: 464 TERDEKHNENSDQVFKFDKLDLEGFAKSMGLAGAPQIKFQKGEDVKRMKNAPRAPLSSGS 523

Query: 669 GGGFGDEWKNRDRLKDLIRKR 689
               GD+ K R R KD +R +
Sbjct: 524 EDESGDD-KPRRRKKDEVRTK 543

gb|EAL65432.1| hypothetical protein DDB0185795 [Dictyostelium discoideum]
(878 aa)

Score: 351 bits (900), Expect: 5.71855e-95
Length: 444, Idn/Pos/Gap = 187/279/6 (42%/62%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  LP+S+ TL+ + E  F ++T+IQ  ++P  L GRDIL +A+TGSGKTL+F++PI+E 
Sbjct: 143 FKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFILPILET 202

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L++ +W   +G GAI+++PTRELA+QIF VL  +  +H  +  +++GG N + E +K IN
Sbjct: 203 LWRNRWGRDDGIGAIVLSPTRELAIQIFDVLKAVGKYHTFSAGLIIGGRNVQQEKDK-IN 261

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             NIL+ATPGRLL H+  T GF   +L+ LV+DEADR L++GF + ++ I+  LP+ RQT
Sbjct: 262 AMNILIATPGRLLQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIVENLPRERQT 321

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSATQT  + DLA++S Q+ P ++ +  +    T + L Q   ++P E +  +LF+F+
Sbjct: 322 LLFSATQTKSIRDLARLSLQE-PEYISVYEKDITTTPQNLTQTLCVIPLEMKLNMLFSFI 380

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           K +   KIIVF +SC  V+F  E    ++    +  LHGK KQ  R   F +F +++  T
Sbjct: 381 KTHLTSKIIVFFASCKQVRFAHETFKLLNPGTTLFPLHGKMKQWTRLEVFEDFCKKKAGT 440

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV-GF 568
           L  TD+AARGLD PAV+W++Q D PD+ + YIHRVGRTAR     G++I  LLPSE  G 
Sbjct: 441 LFATDIAARGLDFPAVEWVIQVDCPDDIETYIHRVGRTARN-DAPGQSITILLPSEKDGM 499

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           +  +   K+     E   EKL  I ++L   +     L+  A+  F SYL++    S K+
Sbjct: 500 VNLMEKQKMKFEILEPNPEKLVSIDSKLSSFLSEKTDLKYLAQKSFVSYLRSVYRQSNKE 559

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
           +F + EL+I   +KS G    P I
Sbjct: 560 IFKIQELNINEFSKSLGLLGTPNI 583

emb|CAD37144.1| probable ATP-dependent RNA helicase [Aspergillus fumigatus]
(750 aa)

Score: 350 bits (897), Expect: 1.0963e-94
Length: 444, Idn/Pos/Gap = 196/278/6 (44%/62%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  LPLSEPT  G+    +  +T+IQ+RAI  AL GRDIL +A+TGSGKTLAFL+P++E 
Sbjct:  49 FSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVLEN 108

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY+ +W   +G GA+I++PTRELA+QIF VL  +  +H  +  +V+GG + + E E+L  
Sbjct: 109 LYRKQWAEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERL-G 167

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             NILV TPGR+L HL  T  F   +L+ LV+DEADR L++GF++ +  I+  LPK RQT
Sbjct: 168 RMNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKERQT 227

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSATQT KV DLA++S Q  P ++ +      AT   LQQ + I P  Q+  +L++F+
Sbjct: 228 LLFSATQTKKVSDLARLSLQD-PEYVAVHETASSATPSKLQQHYVITPLPQKLDILWSFI 286

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           + N + K +VF+SS   V+F  E   ++   +P++ LHG+QKQ  R      F++ +H  
Sbjct: 287 RSNLKSKTMVFLSSGKQVRFVYESFRHLQPGIPLMHLHGRQKQGGRLDIVTRFSQSKHCV 346

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVGF 568
           L  TDVAARGLD PAVDW++Q D P++   YIHRVGRTAR     GRA+LFL PS E G 
Sbjct: 347 LFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTAR-YEREGRAVLFLDPSEEEGM 405

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           L+ L   KVP+ +      K   I+ QL+ +   +  L+   +  F SY+++      K+
Sbjct: 406 LKRLEQKKVPIEKINIKANKQQSIKDQLQNMCFKDPELKYLGQKAFISYVKSVYIQKDKE 465

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
           +F + EL +   A S G    PRI
Sbjct: 466 IFKLKELKLDEFAASLGLPGAPRI 489

ref|XP_536583.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Canis familiaris]
(967 aa)

Score: 350 bits (897), Expect: 1.16224e-94
Length: 445, Idn/Pos/Gap = 191/287/6 (42%/64%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 130 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 188

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F   +L+ LV+DEADR L++GF + M+ I+  LPK RQ
Sbjct: 189 NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQ 248

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + +   +Q+  +L++F
Sbjct: 249 TLLFSATQTKSVKDLARLSLKN-PEYIWVHEKAKYSTPATLEQNYIVCELQQKISVLYSF 307

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   + +L LHG+Q+Q +R   + EF R+  A
Sbjct: 308 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRSA 367

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVG 567
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPS E G
Sbjct: 368 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEEKG 426

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
            +Q L   KVP+ E +   EKL D+Q +LE  +  +  L++ A+  F SY+++      K
Sbjct: 427 MVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDKDLKERAQRCFVSYIRSVYLMKNK 486

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRI 652
           ++F+V  L +   A S G +  PR+
Sbjct: 487 EIFDVSTLPVPEYALSLGLAVAPRV 511

gb|EAA73950.1| hypothetical protein FG05687.1 [Gibberella zeae PH-1]
ref|XP_385863.1| hypothetical protein FG05687.1 [Gibberella zeae PH-1]
(793 aa)

Score: 348 bits (892), Expect: 4.76092e-94
Length: 486, Idn/Pos/Gap = 205/295/10 (42%/60%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  LPLS PT  G+E   F  +T++QARA+PLAL G+DIL +A+TGSGKTLAFLIP++E
Sbjct:  52 KFSELPLSVPTAEGLEIAHFQTLTDVQARAVPLALKGKDILGAAKTGSGKTLAFLIPVLE 111

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+A+W   +G GA+II+PTRELA QIF VL  + + H  +  +V+GG + + EAE+L 
Sbjct: 112 KLYRAQWTEFDGLGALIISPTRELAAQIFEVLRKVGTKHSFSAGLVIGGKSLKEEAERL- 170

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +  NILV TPGR+L H   T GF   +L+ LV+DEADR +++GF+  +  ++  LP+ RQ
Sbjct: 171 DRMNILVCTPGRMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRERQ 230

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T++FSATQ+ KV DLA++S +  P ++ +      AT   LQQ + + P  ++   L+ F
Sbjct: 231 TLMFSATQSKKVSDLARLSLKD-PEYVSVHEAAVSATPTNLQQHYIVTPLTEKLDTLYGF 289

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHA 508
           +K N + KIIVF+SS   V+F  E   ++   +P+L LHG+QKQ  R      F   +  
Sbjct: 290 IKANLKSKIIVFLSSGKQVRFVYESFRHLQPGIPLLHLHGRQKQGARMEITSRFTAAKQT 349

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVG 567
            L  TDV ARG+D PAVDW++Q D P++   YIHRVGRTAR     GRA+LFL PS E G
Sbjct: 350 CLFATDVVARGIDFPAVDWVIQADCPEDVDTYIHRVGRTAR-YESNGRAVLFLDPSEEPG 408

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
            L+ L   K+P+ +    ++K   I+ QL+ +   N  L+   +  F SY ++      K
Sbjct: 409 MLKKLELKKIPIQKVNVKEKKKKSIKDQLQSMCFQNPDLKYLGQKAFISYSRSIHLQRDK 468

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIR---RRG-GGGGFGDEWKNRDRLK 683
           DVF  ++LD+   A S G    P++     E  KKI+   R+G   G   DE   +   K
Sbjct: 469 DVFKFNKLDLDGFAASLGLPGTPQVKFRKGEDIKKIKNAPRQGMSSGSESDEDGEKKTKK 528

Query: 684 DLIRKR 689
             +R +
Sbjct: 529 KEVRTK 534

gb|EAA66688.1| hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
ref|XP_404726.1| hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
(812 aa)

Score: 347 bits (889), Expect: 8.68148e-94
Length: 444, Idn/Pos/Gap = 198/276/6 (44%/62%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  LP+SEPTL G+    F  +T+IQ+RAI  AL GRD+L +A+TGSGKTLAFL+PI+E 
Sbjct:  50 FSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILEN 109

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY+ +W   +G GA+II+PTRELA+QIF VL  +  +H  +  +V+GG + + E E+L  
Sbjct: 110 LYRKQWSDHDGLGALIISPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERL-G 168

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             NILV TPGR+L HL  T  F   +L+ LV+DEADR +++GF++ +  I+  LP  RQT
Sbjct: 169 RMNILVCTPGRMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPPERQT 228

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSATQT KV DLA++S Q  P ++ +      AT   LQQ + + P  Q+   L++F+
Sbjct: 229 LLFSATQTKKVSDLARLSLQD-PEYVAVHEAASSATPSKLQQHYVVTPLPQKLDTLWSFI 287

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           + N + K IVFMSS   V+F  E   ++   +P+L LHG+QKQ  R      F++ +HA 
Sbjct: 288 RSNLKSKTIVFMSSGKQVRFVYESFRHMQPGIPLLHLHGRQKQGGRLDITTRFSQAQHAV 347

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVGF 568
           L  TDVAARGLD PAVDW++Q D P++   YIHRVGRTAR     GRA+LFL PS E G 
Sbjct: 348 LFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTAR-YERDGRAVLFLDPSEEKGM 406

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           L+ L   +V +        K   I+ QL+ +   +  L+   +  F SY+++      K+
Sbjct: 407 LRRLEQKRVTVERINVRANKQQSIKNQLQNMCFKDPELKYLGQKAFISYVKSVYIQKDKE 466

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
            FN+ EL +   A S G    PRI
Sbjct: 467 TFNLKELKLDDFAASLGLPGAPRI 490

gb|AAH80729.1| Ddx10 protein [Mus musculus]
(744 aa)

Score: 347 bits (889), Expect: 1.0344e-93
Length: 435, Idn/Pos/Gap = 192/281/6 (44%/64%/1%)

Query: 221 TLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPR 280
           TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E LY+ +W   
Sbjct:  15 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTST  74

Query: 281 NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATP 340
           +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ IN  NILV TP
Sbjct:  75 DGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-INNINILVCTP 133

Query: 341 GRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTT 400
           GRLL H+  T  F   +L+ LV+DEADR L++GF + M+ I+  LPK RQT+LFSATQT 
Sbjct: 134 GRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTK 193

Query: 401 KVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKII 460
            V+DLA++S +  P ++ +  +   +T   L+Q + I    Q+  +LF+FL+ + +KK I
Sbjct: 194 SVKDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFLRSHLKKKSI 252

Query: 461 VFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAAR 518
           VF SSC  V++   +   +   + +L LHG+Q+Q +R   + EF R+  A L  TD+AAR
Sbjct: 253 VFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAAR 312

Query: 519 GLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVGFLQHLRDAKV 577
           GLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPS E G +Q L   KV
Sbjct: 313 GLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEEQGMVQQLLQKKV 371

Query: 578 PLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDI 637
           P+ E +   EKL D+Q +LE  +  +  L++ A+  F SY+++      K+VFNV +L I
Sbjct: 372 PVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFNVSKLPI 431

Query: 638 AAVAKSFGFSAPPRI 652
              A S G +  PRI
Sbjct: 432 TEYALSLGLAVAPRI 446

emb|CAF06007.1| probable putative RNA helicase HCA4 [Neurospora crassa]
ref|XP_323792.1| hypothetical protein [Neurospora crassa]
gb|EAA28280.1| hypothetical protein [Neurospora crassa]
(823 aa)

Score: 345 bits (886), Expect: 2.08486e-93
Length: 458, Idn/Pos/Gap = 198/287/6 (43%/62%/1%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           ++F  LPL EPT  G+    F  +T++Q  AIPLAL G+DIL +ARTGSGKTLAFL+P++
Sbjct:  57 NKFSDLPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVL 116

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           E LY+A+W   +G GA+II+PTRELA+QIF VL  +  +H  +  +V+GG + + EAE+L
Sbjct: 117 EKLYRARWTEYDGLGALIISPTRELAVQIFEVLRKIGRNHSFSAGLVIGGKSLKEEAERL 176

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               NILV TPGR+L HL  T GF  ++L+ LV+DEADR +++GF++ +  ++  LPK+R
Sbjct: 177 -GRMNILVCTPGRMLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSR 235

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QT+LFSATQ+ +V DLA++S +  P ++ +      AT  GLQQ + + P  ++   L+ 
Sbjct: 236 QTLLFSATQSKRVSDLARLSLKD-PEYVSVHEAAASATPVGLQQHYIVTPLPEKLDTLWG 294

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREH 507
           FL+ N + KIIVFMSS   V+F  E    +   +P+L LHG+QKQ  R      F   ++
Sbjct: 295 FLRTNLKSKIIVFMSSGKQVRFVYESFKRMQPGIPLLHLHGRQKQIARLEITNRFTSAKY 354

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EV 566
           + L  TDV ARG+D PAVDW++Q D P++   YIHRVGRTAR    +GRA+LFL PS E 
Sbjct: 355 SCLFATDVVARGVDFPAVDWVIQVDCPEDADTYIHRVGRTAR-YESKGRAVLFLDPSEEE 413

Query: 567 GFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSM 626
           GFL+ L   KV + +    + K   I+ +L+     +  L+   +  F SY+++      
Sbjct: 414 GFLKRLEHKKVTVQKVNVKENKKKSIKNELQSQCFQSPDLKYLGQKAFVSYVRSIYLQKD 473

Query: 627 KDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIR 664
           K+VF   +LD+   A S G    P+I     E  KK++
Sbjct: 474 KEVFKFDKLDLDGFASSLGLPGTPQIRYQKGEDVKKLK 511

dbj|BAB08770.1| RNA helicase-like protein [Arabidopsis thaliana]
ref|NP_200302.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
(739 aa)

Score: 345 bits (885), Expect: 2.72291e-93
Length: 455, Idn/Pos/Gap = 194/285/6 (42%/62%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  LP+S+ T RG+++  +  MT++Q+ AIP AL GRDIL +ARTGSGKTLAF+IPI+E
Sbjct:  72 KFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILE 131

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            L++ +W P +G G III+PTRELA Q FGVL+ +   H  +  +++GG       ++ +
Sbjct: 132 KLHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERV 191

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +  NILV  PGRLL H+  T  F    L+ L++DEADR L+  F+ ++  I+  LPK RQ
Sbjct: 192 HEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQ 251

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT KV+DLA++S +  P ++ + AE   AT   L Q   IVP E++  +L++F
Sbjct: 252 TLLFSATQTKKVKDLARLSLRD-PEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSF 310

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           +K +   +I+VF+S+   VKF  E  N +   +P+  LHGK  Q KR   + +F  R+ +
Sbjct: 311 IKTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQ-S 369

Query: 509 TLLCTDVAARGLDI-PAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVG 567
            L CTDV ARGLD   AVDW+VQ D P++   YIHRVGRTAR  + +G+++LFL PSE  
Sbjct: 370 VLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTAR-FYTQGKSLLFLTPSEEK 428

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
            ++ L++AKVP+   +   +KL ++   L  L+     LQ  A+  F +YL++      K
Sbjct: 429 MIEKLQEAKVPIKLIKANNQKLQEVSRLLAALLVKYPDLQGVAQRAFITYLRSIHKRRDK 488

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKK 662
           ++F+V +L I   + S G    PRI    L+  KK
Sbjct: 489 EIFDVSKLSIENFSASLGLPMTPRIRFTNLKTKKK 523

emb|CAB60250.1| SPAC1093.05 [Schizosaccharomyces pombe]
ref|NP_594652.1| probable ATP-dependent RNA helicase [Schizosaccharomyces pombe]
pir||T50068 probable ATP-dependent RNA helicase [imported] - fission yeast (Schizosaccharomyces pombe)
(735 aa)

Score: 342 bits (878), Expect: 1.85554e-92
Length: 453, Idn/Pos/Gap = 190/268/5 (41%/59%/1%)

Query: 208 TPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIP 267
           T   F  LPL++PT   ++   F  +TEIQ + IP AL GRDIL +A+TGSGKTLAF++P
Sbjct:  37 TVDHFAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVP  96

Query: 268 IVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           ++E LY+ KW   +G GA++I+PTRELA+Q F  L  +   H  +  +++GG N + E E
Sbjct:  97 LIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEKE 156

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           +L +  NILV TPGRLL H+     F    L+ L++DEADR L++GF   +  I+  LP 
Sbjct: 157 RL-SRMNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPV 215

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQTMLFSATQT  V+DLA++S Q  P  + +      +T   L Q +  VP  ++  +L
Sbjct: 216 HRQTMLFSATQTKSVKDLARLSLQN-PDFISVHENDTSSTPSNLNQFYLTVPLTEKLDIL 274

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARR 505
           F F++ + + K IVF+SSC  V+F  E    +   + +L LHGKQKQ+ RT    +F   
Sbjct: 275 FGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSS 334

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
            H  L CTD+ ARGLD PAVDW++Q D P++   YIHRVGRTAR  +  G A+L LLPSE
Sbjct: 335 RHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTAR-YNRSGNALLLLLPSE 393

Query: 566 VGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHS 625
             FL+ L   K+ +        K   I+ QL+ L   +  ++   +  F SYL++     
Sbjct: 394 EAFLKRLESKKIAVERINVKDGKKTSIRNQLQNLCFKDNDIKYIGQKAFISYLRSIYLQK 453

Query: 626 MKDVFNVHELDIAAVAKSFGFSAPPRICLDVLE 658
            KDVF + +L + A A S G    P+I    L+
Sbjct: 454 DKDVFQLDKLPVEAFADSLGLPGTPKITFGKLK 486

ref|XP_236263.3| PREDICTED: similar to Ddx10 protein [Rattus norvegicus]
(1017 aa)

Score: 342 bits (877), Expect: 2.36351e-92
Length: 482, Idn/Pos/Gap = 197/287/43 (40%/59%/8%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct: 152 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 211

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR-------- 322
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG  R        
Sbjct: 212 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKVRPYLPFPLT 271

Query: 323 -----------------------------RTEAEKLINGTNILVATPGRLLDHLQSTRGF 353
                                        + EAE+ IN  NILV TPGRLL H+  T  F
Sbjct: 272 SLCRWLVQLCTGCCEACVCNQRNNYLQDLKHEAER-INNINILVCTPGRLLQHMDETICF 330

Query: 354 VFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQK 413
              +L+ LV+DEADR L++GF + M+ I+  LPK RQT+LFSATQT  V+DLA++S +  
Sbjct: 331 HATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVKDLARLSLKD- 389

Query: 414 PLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYA 473
           P ++ +  +   +T   L+Q + I    Q+  +LF+FL+ +  KK IVF SSC  V++  
Sbjct: 390 PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFLRSHLTKKSIVFFSSCKEVQYLY 449

Query: 474 ELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQY 531
            +   +   + +L LHG+Q+Q +R   + EF R+  A L  TD+AARGLD PAV+W++Q+
Sbjct: 450 RVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQF 509

Query: 532 DPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVGFLQHLRDAKVPLNEYEFPKEKLA 590
           D P++   YIHR GRTAR     G A+L LLPS E G +Q L   KVP+ E +   EKL 
Sbjct: 510 DCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLI 568

Query: 591 DIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPP 650
           D+Q +LE  +  +  L++ A+  F SY+++      K+VF+V++L I   A S G +  P
Sbjct: 569 DVQKRLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFDVNKLPITEYALSLGLAVAP 628

Query: 651 RI 652
           RI
Sbjct: 629 RI 630

dbj|BAC32191.1| unnamed protein product [Mus musculus]
(462 aa)

Score: 339 bits (870), Expect: 1.3745e-91
Length: 393, Idn/Pos/Gap = 179/259/6 (45%/65%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct:  70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 130 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 188

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F   +L+ LV+DEADR L++GF + M+ I+  LPK RQ
Sbjct: 189 NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQ 248

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V+DLA++S +  P ++ +  +   +T   L+Q + I    Q+  +LF+F
Sbjct: 249 TLLFSATQTKSVKDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSF 307

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + +KK IVF SSC  V++   +   +   + +L LHG+Q+Q +R   + EF R+  A
Sbjct: 308 LRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAA 367

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVG 567
            L  TD+AARGLD PAV+W++Q+D P++   YIHR GRTAR     G A+L LLPS E G
Sbjct: 368 VLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR-YKEDGEALLILLPSEEQG 426

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLV 600
            +Q L   KVP+ E +   EKL D+Q +LE  +
Sbjct: 427 MVQQLLQKKVPVKEIKINPEKLIDVQKKLESFL 459

emb|CAH00581.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_453485.1| unnamed protein product [Kluyveromyces lactis]
(770 aa)

Score: 338 bits (866), Expect: 4.92678e-91
Length: 496, Idn/Pos/Gap = 195/303/17 (39%/61%/3%)

Query: 178 VTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQ 237
           + ++ S  ++ L  E   E+  PK +   L    F  LP+SE TL+G++E  F ++TEIQ
Sbjct:  15 IRERDSQKIKDL--ETKVEEYNPKIAKANL----FQDLPISEQTLKGLKEAAFIKLTEIQ  68

Query: 238 ARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQ 297
             +IPL+L G D+L +A+TGSGKTLAFLIP++E LY+ KW   +G GA+II+PTRELAMQ
Sbjct:  69 RESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEKLYREKWTDMDGLGALIISPTRELAMQ 128

Query: 298 IFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEH 357
           I+ VL  +  H   +  +V+GG +   E E+ I+  NIL+ TPGR+L H+    GF   +
Sbjct: 129 IYEVLSKIGKHTTFSAGLVIGGKDVTFEKER-ISRINILIGTPGRILQHMDQAVGFNTSN 187

Query: 358 LRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVS---FQQKP 414
           L+ LV+DEADRCL++GF+  +  I+  LP +RQT+LFSATQ+  ++DLA++S   ++Q  
Sbjct: 188 LQLLVLDEADRCLDMGFKRTLDAIINNLPASRQTLLFSATQSQSLDDLARLSLTDYKQVG 247

Query: 415 LHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAE 474
               ++A    AT E LQQ +  VP   +  +LF+F+K + + K+IVF+SS   V F  E
Sbjct: 248 TMEVLNANSSSATPESLQQSYIEVPLPDKLDILFSFIKSHLKSKLIVFLSSSKQVHFVYE 307

Query: 475 LLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYD 532
               +   + ++ LHG+QKQ+ RT T  +F+R +H  L  TDV ARG+D P+VDW++Q D
Sbjct: 308 TFRKLQPGISLMHLHGRQKQTARTETLDKFSRAQHVCLFSTDVVARGIDFPSVDWVIQVD 367

Query: 533 PPDEPKEYIHRVGRTARGVHGRGRAILFLLP-SEVGFLQHLRDAKVPLNEYEFPKEKLAD 591
            P++   YIHRVGR AR     G++++ L P  E GFL+ L+   +  +     + K   
Sbjct: 368 CPEDVDTYIHRVGRAAR-FGKEGKSLIMLTPEEEEGFLKRLKTKNIEPSRLNIKQSKKKS 426

Query: 592 IQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPR 651
           I+ QL+ L+  +  L+   +  F SY+++      K+VF+  ++ +   A S G    P+
Sbjct: 427 IKPQLQSLLFKDPELKYLGQKAFISYVRSIYIQKDKEVFHFDKIPLEQFANSLGLPGAPK 486

Query: 652 I---CLDVLERAKKIR 664
           I    +  +E+AK+++
Sbjct: 487 IKMRGMKSIEKAKELK 502

gb|EAK85401.1| hypothetical protein UM04519.1 [Ustilago maydis 521]
ref|XP_402134.1| hypothetical protein UM04519.1 [Ustilago maydis 521]
(869 aa)

Score: 336 bits (862), Expect: 1.35215e-90
Length: 382, Idn/Pos/Gap = 178/262/4 (46%/68%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  LPLS+ T RG++  G+  MT+IQA+++ L+L G+D+L +ARTGSGKTLAFLIP++E
Sbjct:  59 QFTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLE 118

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           +LY+ KW P +G GA++I+PTRELA+QIF VL  + S+H  +  +V+GG + + E ++L 
Sbjct: 119 ILYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHTFSAGLVIGGKDVKQEKDRL- 177

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +  NIL+ATPGRLL H+  T GF   +++ LV+DEADR L++GF   ++ I+  LP+ RQ
Sbjct: 178 SRINILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNRQ 237

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           TMLFSATQT +V+DLA++S Q        + E    T  GL+Q + +V  E++  LLF+F
Sbjct: 238 TMLFSATQTKRVKDLARLSLQDPEYVAVREPENEGCTPRGLEQHYMLVELEKKLDLLFSF 297

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           ++ + + K +VFMSSC  V+F  E    +   V ++ LHGKQKQ+KR   F +F + +HA
Sbjct: 298 IRTHTKCKALVFMSSCRQVQFVHETFCKLRPGVSLMALHGKQKQAKRLQIFTQFTKTQHA 357

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L  TD+AARGLD PAVDW++Q D P++   YIHRVGRTAR    +G ++LF+LP++  F
Sbjct: 358 LLFATDIAARGLDFPAVDWVIQLDVPEDVDTYIHRVGRTAR-YTAKGNSLLFVLPTQKAF 416

Query: 569 LQHLRDAKVPLNEYEFPKEKLA 590
           + ++R   +  N+  F    LA
Sbjct: 417 VSYVRSIHLQKNKEIFDVTALA 438

emb|CAG85100.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_457109.1| unnamed protein product [Debaryomyces hansenii]
(766 aa)

Score: 334 bits (857), Expect: 5.18121e-90
Length: 447, Idn/Pos/Gap = 183/284/9 (40%/63%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  LP+SE T RG++E  FA +T+IQ + IP++L G D++ +A+TGSGKTLAFLIP +E
Sbjct:  47 QFSDLPISEETARGLKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPTIE 106

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            L + K    +G  A+II+PTRELA+QIF VL  +  H++ +  +V GG + + E E+ +
Sbjct: 107 SLIRNKITEYDGLAALIISPTRELAVQIFEVLVKIGKHNNFSAGLVTGGKDVKYEKER-V 165

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +  NILV TPGR+  HL  + G    +L+ LV+DEADRCL++GF++++  IL  LP TRQ
Sbjct: 166 SKMNILVGTPGRISQHLNESVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPPTRQ 225

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPV-ATVEGLQQGFTIVPSEQRFRLLFT 449
           T+LFSATQ+  V+DLA++S    P  +GI ++Q + AT E L+Q +  +P +++  +L++
Sbjct: 226 TLLFSATQSDSVKDLARLSLAN-PKRVGISSDQELSATPESLEQYYIKIPLDEKLDVLWS 284

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREH 507
           F+K + + KI+VF SS   V++  E    +   + +L L+G+ KQ+ R  T  +F++ +H
Sbjct: 285 FIKSHLKSKILVFFSSLKQVQYAYETFRTLQPGISLLKLYGRHKQTSRMETTMKFSQAQH 344

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
           A L  TD+ ARGLD PA+DW+VQ D P++   Y+HRVGR AR   GR G++++ LLPSE 
Sbjct: 345 ACLFATDIVARGLDFPAIDWVVQIDCPEDAATYVHRVGRAAR--FGRAGKSLMMLLPSEE 402

Query: 567 -GFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHS 625
            G L+ L + K+ L      ++    I+ QL+ L   +  ++   +  F SY ++     
Sbjct: 403 NGMLKRLNNNKIELKFMNIKQKNKKTIRPQLQSLCFQDPMIKNLGQRAFISYFRSVYVQK 462

Query: 626 MKDVFNVHELDIAAVAKSFGFSAPPRI 652
            KD+F + EL     A+S G    P+I
Sbjct: 463 DKDIFKIDELPSDKFARSLGLPGAPKI 489

gb|EAL01622.1| hypothetical protein CaO19.2712 [Candida albicans SC5314]
gb|EAL01383.1| hypothetical protein CaO19.10227 [Candida albicans SC5314]
(765 aa)

Score: 331 bits (849), Expect: 3.87017e-89
Length: 486, Idn/Pos/Gap = 189/296/14 (38%/60%/2%)

Query: 177 EVTQKSSPALQSLSSEHASEQEQPK-----PSSGLLTPHRFDSLPLSEPTLRGIEEMGFA 231
           +V  KS+  +  L  E    + Q +     P +   +  +F  LP++E TL+G++E  F 
Sbjct:  10 KVFNKSTRKINRLKEEEELAKLQERINNYDPKTDEASVSQFSDLPITENTLKGLKEATFV  69

Query: 232 RMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPT 291
            +T+IQ + IP+AL G D++ +ARTGSGKTLAFLIP++E L + K    +G  A+I++PT
Sbjct:  70 SLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVIESLIRNKITEYDGLAALIVSPT 129

Query: 292 RELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTR 351
           RELA+QIF VL  +  ++  +  +V GG + + E E+ ++  NILV TPGR+  HL    
Sbjct: 130 RELAVQIFEVLTKIGKYNTFSAGLVTGGKDVQFEKER-VSRMNILVGTPGRISQHLNEAV 188

Query: 352 GFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQ 411
           G    +L+ LV+DEADRCL++GF++++  IL  LP TRQT+LFSATQ+  V DLA++S  
Sbjct: 189 GMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTRQTLLFSATQSESVNDLARLSLT 248

Query: 412 QKPLHLGIDAEQPV-ATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVK 470
             P  +G+ ++Q V AT E L+Q +  VP +++  +L++F+K + + KI+VF SS   V+
Sbjct: 249 N-PNKIGVSSDQEVSATPESLEQYYVKVPLDEKLDVLWSFIKSHLKSKILVFFSSSKQVQ 307

Query: 471 FYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWI 528
           +  E    +   + ++ L+G+ KQ+ R  T  +F++ +HA L  TD+ ARGLD PA+DW+
Sbjct: 308 YTYETFRTLQPGISLMKLYGRHKQTSRLETTMKFSQAQHACLFATDIVARGLDFPAIDWV 367

Query: 529 VQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPS-EVGFLQHLRDAKVPLNEYEFPK 586
           VQ D P++   Y+HRVGR+AR   GR G+++L LLPS E G L+ L+  K+        +
Sbjct: 368 VQVDCPEDAATYVHRVGRSAR--FGRKGKSLLMLLPSEEEGMLKRLKIHKIEPKLMNIKQ 425

Query: 587 EKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGF 646
           +    I+ QL+ L   +  ++   +  F +Y ++      KDVF V EL   + A S G 
Sbjct: 426 KSKKSIRPQLQSLCFKDPVMKNLGQRAFIAYFKSVHIQKDKDVFKVEELPAESYAASLGL 485

Query: 647 SAPPRI 652
              P+I
Sbjct: 486 PGAPKI 491

gb|AAB17005.1| putative RNA helicase [Saccharomyces cerevisiae]
(770 aa)

Score: 330 bits (846), Expect: 9.21698e-89
Length: 511, Idn/Pos/Gap = 199/300/22 (38%/58%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  LP+S+PTL+G+ E  F ++TEIQA +IP++L G D+LA+A+TGSGKTLAFL+P++E 
Sbjct:  43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY+ KW   +G GA+II+PTRELAMQI+ VL  + SH   +  +V+GG + + E E+ I+
Sbjct: 103 LYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELER-IS 161

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             NIL+ TPGR+L HL    G    +L+ LV+DEADRCL++GF++ +  I+  L  +RQT
Sbjct: 162 RINILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQT 221

Query: 392 MLFSATQTTKVEDLAKVS---FQQKPLHLGIDAE--QPVATVEGLQQGFTIVPSEQRFRL 446
           +LFSATQ+  V DLA++S   ++    H  +D    +  +T E LQQ +  VP   +  +
Sbjct: 222 LLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQQFYIEVPLADKLDI 281

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFAR 504
           LF+F+K + + K+IVF+SS   V F  E    +   + ++ LHG+QKQ  RT T  +F R
Sbjct: 282 LFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNR 341

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
            +   L  TDV ARG+D PAVDW+VQ D P++   YIHRVGR AR    +G++++ L P 
Sbjct: 342 AQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCAR-YGKKGKSLIMLTPQ 400

Query: 565 EV-GFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYAS 623
           E   FL+ L   K+   +    + K   I+ QL+ L+  +  L+   +  F SY+++   
Sbjct: 401 EQEAFLKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVRSIYV 460

Query: 624 HSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWKNRDRLK 683
              K+VF   EL     A S G    P+I +  ++  ++ + R          KN  R  
Sbjct: 461 QKDKEVFKFDELPTEEFAYSLGLPGAPKIKMKGMKTIEQAKER----------KNAPRQL 510

Query: 684 DLIRKRLASGQRF--RASNPHGKRDEQDRRQ 712
            L+ K    G+    ++  P  K D+   R+
Sbjct: 511 ALLSKANEDGEVIEDKSKQPRTKYDKMFERK 541

ref|XP_594856.1| PREDICTED: similar to hypothetical protein, partial [Bos taurus]
(363 aa)

Score: 330 bits (845), Expect: 1.09821e-88
Length: 268, Idn/Pos/Gap = 161/217/2 (60%/80%/0%)

Query: 200 PKPSSGLLTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTG 257
           P   +G      FDSL   ++E TL+ I+EMGF  MTEIQ ++I   L GRD+LA+A+TG
Sbjct:  96 PLGLTGAFEDTSFDSLTNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTG 155

Query: 258 SGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM 317
           SGKTLAFLIP VEL+ K K+MPRNGTG +I++PTRELAMQ FGVL +L +HH  T  ++M
Sbjct: 156 SGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIM 215

Query: 318 GGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEE 377
           GG+NR  EA+KL NG NI+VATPGRLLDH+Q+T GF++++L+ LVIDEADR L++GFEEE
Sbjct: 216 GGSNRSAEAQKLANGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEE 275

Query: 378 MHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTI 437
           + +I+++LP  RQTMLFSATQT KVEDLA++S +++PL++G+D ++  ATV+GL+QG+ +
Sbjct: 276 LKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVV 335

Query: 438 VPSEQRFRLLFTFLKRNQRKKIIVFMSS 465
            PSE+RF LLFTFLK+N++KK++VF SS
Sbjct: 336 CPSEKRFLLLFTFLKKNRKKKLMVFFSS 363

emb|CAA89324.1| HCA4 [Saccharomyces cerevisiae]
sp|P20448|DBP4_YEAST Probable ATP-dependent RNA helicase DBP4 (Helicase CA4) (Helicase UF1)
ref|NP_012501.1| Hca4p [Saccharomyces cerevisiae]
(770 aa)

Score: 330 bits (845), Expect: 1.13548e-88
Length: 463, Idn/Pos/Gap = 189/283/10 (40%/61%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  LP+S+PTL+G+ E  F ++TEIQA +IP++L G D+LA+A+TGSGKTLAFL+P++E 
Sbjct:  43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY+ KW   +G GA+II+PTRELAMQI+ VL  + SH   +  +V+GG + + E E+ I+
Sbjct: 103 LYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELER-IS 161

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             NIL+ TPGR+L HL    G    +L+ LV+DEADRCL++GF++ +  I+  L  +RQT
Sbjct: 162 RINILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQT 221

Query: 392 MLFSATQTTKVEDLAKVS---FQQKPLHLGIDAE--QPVATVEGLQQGFTIVPSEQRFRL 446
           +LFSATQ+  V DLA++S   ++    H  +D    +  +T E LQQ +  VP   +  +
Sbjct: 222 LLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQQFYIEVPLADKLDI 281

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFAR 504
           LF+F+K + + K+IVF+SS   V F  E    +   + ++ LHG+QKQ  RT T  +F R
Sbjct: 282 LFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNR 341

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
            +   L  TDV ARG+D PAVDW+VQ D P++   YIHRVGR AR    +G++++ L P 
Sbjct: 342 AQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCAR-YGKKGKSLIMLTPQ 400

Query: 565 EV-GFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYAS 623
           E   FL+ L   K+   +    + K   I+ QL+ L+  +  L+   +  F SY+++   
Sbjct: 401 EQEAFLKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVRSIYV 460

Query: 624 HSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRR 666
              K VF   EL     A S G    P+I +  ++  ++ + R
Sbjct: 461 QKDKQVFKFDELPTEEFAYSLGLPGAPKIKMKGMKTIEQAKER 503

gb|AAT93137.1| YJL033W [Saccharomyces cerevisiae]
(770 aa)

Score: 329 bits (844), Expect: 1.55912e-88
Length: 463, Idn/Pos/Gap = 189/283/10 (40%/61%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  LP+S+PTL+G+ E  F ++TEIQA +IP++L G D+LA+A+TGSGKTLAFL+P++E 
Sbjct:  43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY+ KW   +G GA+II+PTRELAMQI+ VL  + SH   +  +V+GG + + E E+ I+
Sbjct: 103 LYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELER-IS 161

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             NIL+ TPGR+L HL    G    +L+ LV+DEADRCL++GF++ +  I+  L  +RQT
Sbjct: 162 RINILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQT 221

Query: 392 MLFSATQTTKVEDLAKVS---FQQKPLHLGIDAE--QPVATVEGLQQGFTIVPSEQRFRL 446
           +LFSATQ+  V DLA++S   ++    H  +D    +  +T E LQQ +  VP   +  +
Sbjct: 222 LLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQQFYIEVPLADKLDI 281

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFAR 504
           LF+F+K + + K+IVF+SS   V F  E    +   + ++ LHG+QKQ  RT T  +F R
Sbjct: 282 LFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNR 341

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
            +   L  TDV ARG+D PAVDW+VQ D P++   YIHRVGR AR    +G++++ L P 
Sbjct: 342 AQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCAR-YGKKGKSLIMLTPQ 400

Query: 565 EV-GFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYAS 623
           E   FL+ L   K+   +    + K   I+ QL+ L+  +  L+   +  F SY+++   
Sbjct: 401 EQEAFLKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVRSIYV 460

Query: 624 HSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRR 666
              K VF   EL     A S G    P+I +  ++  ++ + R
Sbjct: 461 QKDKQVFKFDELPTEEFAYSLGLPGAPKIKMKGMKTIEQAKER 503

emb|CAG84219.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_500281.1| hypothetical protein [Yarrowia lipolytica]
(740 aa)

Score: 327 bits (839), Expect: 6.38667e-88
Length: 447, Idn/Pos/Gap = 181/271/6 (40%/60%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F+ LPLSE T+ G++   +   T++Q RAIP AL G D+L +ARTGSGKTLAFL+P++E
Sbjct:  40 KFEELPLSEATIEGLKNSHYVTCTDVQKRAIPPALQGHDLLGAARTGSGKTLAFLVPVLE  99

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            L++ KW   +G GA++I+PTRELA+QIF VL  +   H  +  +V+GG +   EA++L 
Sbjct: 100 CLFRNKWSDVDGLGALVISPTRELAVQIFQVLRKIGRCHSFSAGLVIGGKDVAMEADRLA 159

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              NIL+ TPGRLL H+  T GF   +++ LV+DEADR L++GF++ M  IL  LP  RQ
Sbjct: 160 K-LNILICTPGRLLQHMDQTSGFDLSNVKMLVLDEADRILDMGFKKTMDAILENLPVDRQ 218

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V DLA++S    P ++  + +   +T + L+Q +  V  + +   L+ F
Sbjct: 219 TLLFSATQTKSVSDLARLSLAD-PKYISANPDTTSSTPKNLEQNYVCVELQDKLDTLWGF 277

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHA 508
           L+ + + KIIVF SS   V++  E    +   +P+L LHGKQKQ  R     +F++   +
Sbjct: 278 LRTHTKFKIIVFFSSSKQVRYVYETFRTLQPGIPLLHLHGKQKQGARMDVVSKFSKASSS 337

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVG 567
            L  TD+ ARG+D PAV W+VQ D P++   YIHRVGR+AR     G+A+LFL P+ E  
Sbjct: 338 CLFATDIVARGIDFPAVHWVVQVDCPEDAATYIHRVGRSAR-FGKSGKALLFLTPTEEPA 396

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
            +Q L    +P+N+      K   I+ QL+ L   +  ++   +  F SY ++      K
Sbjct: 397 MIQRLEAKHIPINKLTIRPNKKKSIKNQLQALCFKSPEIKYLGQKAFISYYKSIFIQKDK 456

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRICL 654
           ++F   ++   A A+S G    P+I L
Sbjct: 457 EIFQFEKIPSEAFAESLGLPGAPQIKL 483

gb|AAS51267.1| ACR040Wp [Ashbya gossypii ATCC 10895]
ref|NP_983443.1| ACR040Wp [Eremothecium gossypii]
(763 aa)

Score: 322 bits (825), Expect: 2.48917e-86
Length: 513, Idn/Pos/Gap = 192/307/23 (37%/59%/4%)

Query: 163 ATVHEMEPLARPCPEVTQKSSPALQSLSSEHASEQEQPKP-SSGLLTPHRFDSLPLSEPT 221
           A  H +  + R   E+ QK S AL+ L       QE+ K   +       F  LP+S  T
Sbjct:   2 AKKHRLTTVKRK--ELRQKESEALKQL-------QERIKDYDAKTCRAVTFQDLPISSGT  52

Query: 222 LRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRN 281
           ++G++E  + +MT+IQ  AIP+AL G D+L +A+TGSGKTLAFL+P++E LY  +W   +
Sbjct:  53 VKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLEKLYHERWTELD 112

Query: 282 GTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPG 341
           G GA++I+PTRELAMQI+ VL  +  +   +  +V+GG + + E E+ ++  NIL+ TPG
Sbjct: 113 GLGALVISPTRELAMQIYEVLVKIGKYMSFSAGLVIGGKDVKFEMER-VSKINILIGTPG 171

Query: 342 RLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTK 401
           RLL H+  + G    +L+ LV+DEADRCL++GF++ +  I+  LP +RQT+LFSATQ+  
Sbjct: 172 RLLQHMDQSVGLNTSNLQILVLDEADRCLDMGFKKALDAIVSNLPPSRQTLLFSATQSQS 231

Query: 402 VEDLAKVS---FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKK 458
           + DLA++S   ++      G  ++   AT E L+Q +  V    +  +LF+F+K + + K
Sbjct: 232 LADLARLSLADYKTVGTMDGPSSKNKPATPENLEQFYIQVALPDKLDILFSFIKSHLKSK 291

Query: 459 IIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
           +IVF+SS   V F  E    +   + ++ LHG+QKQ+ RT T  +F+R +H  L  TDV 
Sbjct: 292 MIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQTARTETLDKFSRAQHVCLFSTDVV 351

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSE-VGFLQHLRD 574
           ARG+D P+VDW++Q D P++   YIHR GR+AR  +G+ G+++L L P E   FL  L+ 
Sbjct: 352 ARGIDFPSVDWVIQTDCPEDVDTYIHRAGRSAR--YGKTGKSLLMLTPQEKYAFLARLKG 409

Query: 575 AKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHE 634
             +  ++    + K   I+ QL+ L+  +  L+  A+  F SY+++       +VF  +E
Sbjct: 410 KLIEPSKLNIKQSKRKSIKPQLQSLLFKDPELKYLAQKAFISYVRSIYIQKDTEVFKFNE 469

Query: 635 LDIAAVAKSFGFSAPPRICL---DVLERAKKIR 664
           L +   A S G    P++ +     +E+AK+++
Sbjct: 470 LPLEEFAASLGLPGAPQVKIKGKKSIEKAKELK 502

ref|XP_478420.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
dbj|BAC83715.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
dbj|BAD31318.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
(773 aa)

Score: 322 bits (825), Expect: 2.89254e-86
Length: 450, Idn/Pos/Gap = 183/276/11 (40%/61%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RFD LPLS  T  G+ + G+  M+EIQ  A+P AL GRD+L +A+TGSGKTLAF+IP++E
Sbjct:  81 RFDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLE 140

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W P +G G I+++P ++LA QIF V   +   H  + A ++G      E + +I
Sbjct: 141 KLYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQKVGKLHGFSAACIVGNRKGLDEEKAVI 200

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHL-RFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
           N  NILV TPGRLL H+  T  F    + + LVIDEAD+ L+  F+E++  ++  LPK R
Sbjct: 201 NNMNILVCTPGRLLQHMGETTNFDCSQIQQILVIDEADQVLDKNFQEQVDNVVSQLPKVR 260

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QT+LFSATQT  V+DLA+VS +  P ++ +  E   AT + L+Q   IVP EQ+  +L++
Sbjct: 261 QTLLFSATQTKSVKDLARVSLKD-PEYISVHEEATTATPDTLEQYAMIVPLEQKLNMLWS 319

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREH 507
           F+KR+ + +I+VF+SS   VKF  E+   +   + +  +HG+ K   + +   EF +  H
Sbjct: 320 FIKRHLKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGRMKYEVQQAIVAEF-KEGH 378

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVG 567
           + L  TD+ ARGLDI  VDW+VQ D P+    YIHRVGRTAR  + RG+A++FL P E  
Sbjct: 379 SVLFSTDIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTAR-YNKRGKALIFLCPEEEK 437

Query: 568 FLQHLR--DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHS 625
            L+ L+  ++K+P++  +   E+L  I   +  ++     LQ+  +  F +YL++    S
Sbjct: 438 MLEKLKAAESKIPIHIKKPNTEQLQQISQNIASVLVQYPNLQQLGKRAFVTYLKSVYLQS 497

Query: 626 MKDVFNVHEL---DIAAVAKSFGFSAPPRI 652
            K+VF++      + AA A S G    P+I
Sbjct: 498 DKEVFDLSRFSMENFAAYAASLGLPVTPKI 527

gb|AAX80577.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei]
(828 aa)

Score: 322 bits (824), Expect: 3.14424e-86
Length: 457, Idn/Pos/Gap = 189/273/10 (41%/59%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RFD LPLS+ T  G+E  G+  +T IQ+ A+ LAL+G D+L +ARTGSGKTL F++P++E
Sbjct:  63 RFDQLPLSQRTQLGLERGGYKLLTPIQSDALHLALAGYDVLGAARTGSGKTLCFIVPLLE 122

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           LLY  +W    G GA++++PTRELA+QIF VL  L  + H   A ++ G     E  K +
Sbjct: 123 LLYVEQWEAEMGIGALVLSPTRELALQIFKVLQ-LVGYKHVMSAALLTGGRDVNEERKRV 181

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +  +I+V TPGR+L HL+     V ++L+ LV+DEADR L++GF E +  IL+ LP  RQ
Sbjct: 182 SAISIIVGTPGRVLHHLEDDDSLVTDNLQMLVMDEADRLLDMGFREVLSGILKQLPTQRQ 241

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T++FSATQTT V+ L ++S + +  ++   AE    T   L Q F +V   ++  +L  F
Sbjct: 242 TLMFSATQTTDVQMLGQMSLRNQR-YVSAHAECAAPTPSTLCQNFVVVELHRKLDVLLLF 300

Query: 451 LKRNQRKKIIVFMSSCNGVKF----YAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           LKR+   K +VF+S+CN V++    +A++L  + +P + L  K KQ +R   F  F R +
Sbjct: 301 LKRHPNDKFVVFVSTCNQVRYMYLAFAKILKKMHLPCMCLTSKMKQFRREEVFLTFCRCK 360

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
           +A L CTDVAARGLD P + W VQ+D PD  + YIHR GRTAR    RG ++LFL P EV
Sbjct: 361 NAVLFCTDVAARGLDFPLIHWSVQFDCPDSAQTYIHRAGRTARA-GARGVSLLFLTPREV 419

Query: 567 GFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSM 626
             L  L    +PL E     + L + +     LV     L+  A+  F +YL++    + 
Sbjct: 420 PMLSFLAHKHIPLREIAVRPQMLRESKEIFVALVVQG--LKYEAQKAFIAYLRSVYFAAN 477

Query: 627 KDVFNVHELDIAAVAKSFGFSAPPRIC-LDVLERAKK 662
           K VF+V  +D+A  A S G    P +  L  L+R  K
Sbjct: 478 KLVFDVKSIDVAPFAHSLGLMKVPDMSELGNLQRGAK 514

gb|AAF60456.1| Hypothetical protein Y23H5B.6 [Caenorhabditis elegans]
ref|NP_490989.1| probable atp-dependent RNA helicase Ddx10 (82.6 kD) (1D65) [Caenorhabditis elegans]
(732 aa)

Score: 322 bits (824), Expect: 3.25095e-86
Length: 459, Idn/Pos/Gap = 178/284/8 (38%/61%/1%)

Query: 197 QEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASART 256
           QE  K SS   T  RF+  PLS  TL G+++  + + TEIQ   I  +L+G D++ +A+T
Sbjct:  65 QEMLKKSS--RTFLRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKT 122

Query: 257 GSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV 316
           GSGKTLA +IP++E L++AKW P  G GA+II+PTRELA+Q F  ++ + +HH  +  +V
Sbjct: 123 GSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLV 182

Query: 317 MGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEE 376
           +GG++   E  + I+G NI+V TPGRLL H+        + L+ LV+DEADR L++GF +
Sbjct: 183 IGGSDVAFERNR-ISGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSK 241

Query: 377 EMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT 436
           +++ I+  LP  RQT+LFSATQT  V+DL +V     P+ + +      AT + L+Q + 
Sbjct: 242 QLNSIINNLPAERQTLLFSATQTRNVKDLCRVC-TNDPVFVSVHENASAATPDNLKQSYV 300

Query: 437 IVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSK 494
           IV  E +   L++F++ +++KK +VF+SSC   +F  E  + +   +PV+ L G   Q K
Sbjct: 301 IVEEEHKINALWSFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKK 360

Query: 495 RTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR 554
           R  TF +F   + A L+ TDVA+RGLD   +DW++Q D P +  +YIHRVGR+AR +   
Sbjct: 361 RIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSAR-MDDS 419

Query: 555 GRAILFLLPS-EVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDG 613
           G ++L + PS E   +  L    +P+ E +   + ++D++ +L  ++  +  L++ A+  
Sbjct: 420 GNSLLMVSPSQEEAMIGKLEKHSIPIEELKIHPDAMSDVRVKLRAILAESQELKEYAQKS 479

Query: 614 FRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
             +YL++  +   K VF+V  +D AA+A SFG  + PR+
Sbjct: 480 IVAYLRSIYTMKDKKVFDVEAIDAAALADSFGLVSVPRV 518

emb|CAG60704.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_447757.1| unnamed protein product [Candida glabrata]
(765 aa)

Score: 320 bits (819), Expect: 1.3769e-85
Length: 459, Idn/Pos/Gap = 185/273/8 (40%/59%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  LP+S+ TL+G+ E  F +MT+IQ  +I  +L G D+  +A+TGSGKTLAFL+P++E 
Sbjct:  43 FKDLPISKSTLKGLNEASFIKMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLEK 102

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY+ +W   +G GA+II+PTRELAMQI+ VL  + SH   +  +V+GG +   E E+ I 
Sbjct: 103 LYRERWTEFDGLGALIISPTRELAMQIYEVLVKIGSHTQFSAGLVIGGKDVNFELER-IA 161

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             NIL+ TPGR+L H+    G    +L+ LV+DEADRCL++GF++ +  I+  LP  RQT
Sbjct: 162 KINILIGTPGRILQHMDQAVGLNTSNLQMLVLDEADRCLDMGFQKTLDAIVGNLPPDRQT 221

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDA-EQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           +LFSATQ+  + DLA++S         ID+ E   AT + LQQ + I     +  +L++F
Sbjct: 222 LLFSATQSQSISDLARLSLTDYKKIGTIDSSEDGPATPKTLQQSYIIADLADKLDVLYSF 281

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYID--VPVLDLHGKQKQSKRTSTFFEFARREHA 508
           +K + + K+IVF SS   V F  E    +   + +L LHG+QKQ  RT T  +F R +  
Sbjct: 282 IKSHLKTKMIVFFSSSKQVHFVYETFRKMQPGISLLHLHGRQKQRARTETLDKFFRAQQV 341

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L  TDV ARG+D PAVDW++Q D P++   YIHRVGR AR    +GR+++ L P E  F
Sbjct: 342 CLFATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRAAR-YGKKGRSLIILTPQEEAF 400

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           L  +   K+   +    + K   I+ QL+ L+  +  L+   +  F SY+++      K+
Sbjct: 401 LTRMAAKKIEPGKLTIKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVKSIYIQKDKE 460

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI---CLDVLERAKKIR 664
           VF   EL     A S G    PRI    +  +E+AKK++
Sbjct: 461 VFKFDELPTEEFANSLGLPGAPRIKIKGMKAIEQAKKLK 499

emb|CAE60391.1| Hypothetical protein CBG03992 [Caenorhabditis briggsae]
(750 aa)

Score: 318 bits (814), Expect: 5.27604e-85
Length: 459, Idn/Pos/Gap = 176/282/8 (38%/61%/1%)

Query: 197 QEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASART 256
           QE  K SS   T  RF+  PLS  TL G++E  + + TEIQ   I  +L+G D++ +A+T
Sbjct:  65 QEMLKKSS--RTFLRFEDFPLSWRTLEGLKENEYVKPTEIQRDTIAHSLTGADVVGAAKT 122

Query: 257 GSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV 316
           GSGKTLA +IPI+E L++ KW P  G GA++I+PTRELA+Q F  ++ +  HH  +  +V
Sbjct: 123 GSGKTLALVIPILEALWRVKWSPEYGLGALVISPTRELALQTFSTINAVGKHHGFSCGLV 182

Query: 317 MGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEE 376
           +GG+    E  + I+G NI+V TPGRLL H+        + L+ LV+DEADR L++GF +
Sbjct: 183 IGGSEVAFERNR-ISGINIIVCTPGRLLQHMDENEQMNCDSLQILVLDEADRMLDMGFSK 241

Query: 377 EMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT 436
           +++ I+  LP  RQT+LFSATQT  V+DL++V     P+ + +      AT + L+Q + 
Sbjct: 242 QLNSIINNLPAERQTLLFSATQTRNVKDLSRVC-TNDPVFVSVHENSAAATPDNLKQSYV 300

Query: 437 IVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSK 494
           +V  E +   L++F++ +++KK +VF+SSC   +F  E+ + +   +PV+ L G   Q K
Sbjct: 301 VVEEEIKINTLWSFIEAHKKKKSLVFVSSCKQARFLTEVFSQLRPGLPVMGLWGTMNQKK 360

Query: 495 RTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR 554
           R  TF ++   + A L+ TDVA+RGLD   +DW++Q D P +  +YIHRVGR+AR +   
Sbjct: 361 RIETFTKYDESKAAVLIATDVASRGLDFERIDWVIQVDCPAQIDDYIHRVGRSAR-MEES 419

Query: 555 GRAILFLLPS-EVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDG 613
           G ++L +  S E   +  L    +P+ E +   + + D++ +L  ++  +  L++ A+  
Sbjct: 420 GNSLLMVTSSQEEAMISKLAKHSIPIEELKIHPDAMTDVRLKLRAILAESQELKEYAQKS 479

Query: 614 FRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
             +YL++  +   K +FNV+ +D AA+A SFG  + PRI
Sbjct: 480 IVAYLRSIYTMKDKKIFNVNTIDAAALADSFGLVSVPRI 518

ref|XP_393877.1| similar to CG5800-PA [Apis mellifera]
(742 aa)

Score: 311 bits (798), Expect: 3.0949e-83
Length: 454, Idn/Pos/Gap = 172/266/43 (37%/58%/9%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  LPLS  TL+G+ E  +  MT+IQ ++I LAL G DIL +A+TGSGKTLAFLIP++E
Sbjct:  40 KFTDLPLSSKTLKGLAENNYFEMTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIPVLE  99

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           +LY  +W   +G GA+II PTRELA QI+  L  +  +H  +  +++GG + + E  ++ 
Sbjct: 100 ILYCKQWTRLDGLGALIITPTRELAYQIYETLRKVGQYHDISAGLIIGGKDLKFEKRRM- 158

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +  NI++ TPGRLL H+     F   +++ L++DEADRCL++GFE+ M+ I+  LP  RQ
Sbjct: 159 DQCNIVICTPGRLLQHMDENPLFDCINMQLLILDEADRCLDMGFEQTMNSIIENLPPKRQ 218

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSATQT  V DLA++S +  PL++ +       T E LQQ + +   E +  +L++F
Sbjct: 219 TLLFSATQTKSVRDLARLSLKD-PLYVSVHEHSKHITPETLQQSYVVCALEDKISMLWSF 277

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           ++ + ++KII+F SSC  VK+  E+                          F R      
Sbjct: 278 IRNHLKQKIIIFFSSCKQVKYINEI--------------------------FCRLRP--- 308

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
                     D PAV+W++Q D P++   YIHR GRTAR     G  +L LLPSE   +Q
Sbjct: 309 ----------DFPAVNWVIQMDCPEDVNAYIHRAGRTAR-FQQNGECLLVLLPSEEKMIQ 357

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF 630
            L++ K+P++  +    KL   Q ++E L+  +  L++SA+  F +Y+++      K++F
Sbjct: 358 KLKECKIPISMIQINPNKLQSPQRKMEALLARDVSLKESAQRAFVAYVRSIFLMKDKEIF 417

Query: 631 NVHELDIAAVAKSFGFSAPPRI-CLDVLERAKKI 663
           NVH L+    ++S G + PPRI  L  LE+ K++
Sbjct: 418 NVHTLNTDLFSRSLGLAIPPRIRFLQRLEQKKQL 451

gb|EAL32358.1| GA19139-PA [Drosophila pseudoobscura]
(838 aa)

Score: 308 bits (788), Expect: 4.81755e-82
Length: 506, Idn/Pos/Gap = 184/288/33 (36%/56%/6%)

Query: 173 RPCPEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFAR 232
           RP PE   KS  A   L      E+ +   +  +    +F   PLS+ T + + E  F  
Sbjct:  31 RPRPEY-NKSKLAANDLEIRELQERYKEIDAQAI---KKFAQFPLSKKTQKALAEAKFVN  86

Query: 233 MTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTR 292
            T++Q  ++  AL G+D+L +A TGSGKTLAFLIP++E L+  KW   +G GAIII+PTR
Sbjct:  87 PTQVQLESLGPALLGKDVLGAAVTGSGKTLAFLIPVLEHLFIHKWSRTDGVGAIIISPTR 146

Query: 293 ELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRG 352
           ELA QIF  L  +  HH  +  +++GG N + E  ++ +  NIL+ TPGRLL H+     
Sbjct: 147 ELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRM-DQCNILICTPGRLLQHMDENPL 205

Query: 353 FVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQ 412
           F    +  LV+DEADRCL++GF++ ++ I+   P  RQT+LFSATQT  V+DLA+++ + 
Sbjct: 206 FNTSSMEVLVLDEADRCLDMGFQKTLNSIIENFPPERQTLLFSATQTNTVQDLARLNLKD 265

Query: 413 KPLHLGIDAEQP----------------------VATVEGLQQGFTIVPSEQRFRLLFTF 450
            P+++G  ++                        +A  E LQQ + ++  E +  +L++F
Sbjct: 266 -PVYVGYGSQSAASTSSSASASTSIKEGSQTTAVLAVPELLQQSYVVLNLEDKITMLWSF 324

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           +K + ++KIIVF+SSC   K+  E+   +    P+L L+G   Q +R + + +F R+ H 
Sbjct: 325 IKNHLKQKIIVFVSSCKQAKYLYEIFCKLRPGCPLLALYGTLHQDRRIAIYEDFLRKSHV 384

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            +  TDVA+RGLD PAV+W+VQ D P++  +YIHR GR+AR    RG  +L L PSE  +
Sbjct: 385 VMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARN-KTRGECLLVLTPSEEDY 443

Query: 569 LQHLRDAKVPLNEY--EFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSM 626
           +      ++ LN +  +   +KL   + ++E  +     L+ +A+  F SYL++      
Sbjct: 444 MIRALKEQLNLNIHCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYLKSVFLMRN 503

Query: 627 KDVFNVHELDIAAVAKSFGFSAPPRI 652
           K +FNV  LD+ A A+S G +  PR+
Sbjct: 504 KRLFNVFSLDLDAYAQSLGLAVTPRV 529

ref|NP_573230.1| CG5800-PA [Drosophila melanogaster]
gb|AAM50282.1| RE19835p [Drosophila melanogaster]
gb|AAF48747.2| CG5800-PA [Drosophila melanogaster]
(826 aa)

Score: 308 bits (788), Expect: 5.50559e-82
Length: 462, Idn/Pos/Gap = 174/274/23 (37%/59%/4%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F   PLS+ T + + E  F   T++Q  +I  AL G+D+L +A TGSGKTLAFLIP++E
Sbjct:  73 KFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLE 132

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            L+  KW   +G GAIII+PTRELA QIF  L  +  HH  +  +++GG N + E  ++ 
Sbjct: 133 HLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRM- 191

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +  NIL+ TPGRLL H+     F    +  LV+DEADRCL++GF++ ++ I+   P  RQ
Sbjct: 192 DQCNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQ 251

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQP----------------VATVEGLQQG 434
           T+LFSATQT  V+DLA+++ +  P+++G     P                +A  E LQQ 
Sbjct: 252 TLLFSATQTNTVQDLARLNLKD-PVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQS 310

Query: 435 FTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQ 492
           + ++  E +  +L++F+K + ++KIIVF++SC   K+  E+   +    P+L L+G   Q
Sbjct: 311 YVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQ 370

Query: 493 SKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            +R + + +F R+ H  +  TDVA+RGLD PAV+W+VQ D P++  +YIHR GR+AR   
Sbjct: 371 DRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARN-K 429

Query: 553 GRGRAILFLLPSEVGFL-QHLRDA-KVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSA 610
            RG  +L L PSE  ++   L++   + +   +   +KL   + ++E  +     L+ +A
Sbjct: 430 TRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATA 489

Query: 611 RDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           +  F SY+++      K +FNV  LD+ A A+S G +  PR+
Sbjct: 490 QRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRV 531

gb|EAL45659.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
(624 aa)

Score: 300 bits (767), Expect: 1.24788e-79
Length: 440, Idn/Pos/Gap = 174/264/19 (39%/60%/4%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RFD  P+S+ T++ + +  F  MT IQ  AIP AL+GRDI+ +ARTGSGKTLAFLIP++E
Sbjct:  90 RFDQFPISKATIQLLNKNRFITMTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLIE 149

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            +Y+++W   +G  AII++PTRELA QIF V   +A     T A++ GG + + EA K+I
Sbjct: 150 FMYRSRWTELDGLCAIILSPTRELAQQIFDVFASIAGERF-TAALITGGKDTKEEA-KVI 207

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              N+L+ TPGRLL HL +T  F    LR L++DEADR L++GF++++  IL  LPK RQ
Sbjct: 208 RLMNVLICTPGRLLYHLDNTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEHLPKQRQ 267

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           TMLFSATQT  V+DL ++S +  P ++ +D +   AT E L Q + ++    +  +LF+F
Sbjct: 268 TMLFSATQTKSVQDLIRLSLRH-PEYISVDEKAQHATPETLNQTYMLLGDGDKINVLFSF 326

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVL--DLHGKQKQSKRTSTFFEFARREHA 508
           ++ +   K+IVF  +   V+F+ E    + V  +   L+G+Q Q+ R      F + +  
Sbjct: 327 IRTHTNSKMIVFFQTTKEVRFFFETFKKLRVGAVLYLLYGRQSQNSRNEQLSTFTKEKR- 385

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
                       DI  VDWIVQYD P++  +YIHRVGRTAR ++  G+A+L L  +E  F
Sbjct: 386 ------------DIQGVDWIVQYDCPEDTAQYIHRVGRTAR-INHNGQALLLLTHNEEAF 432

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
           ++ L  AKVPLN  E    ++ +I   + +L+     ++  A     +Y+ +      K 
Sbjct: 433 IEQLEKAKVPLNRVEPNIARMKNIANDITELMIEVPIIKHYAEKSIDAYIYSLTKMHNKS 492

Query: 629 VFNVHELDIAAVAKSFGFSA 648
           VF+  ++D  A+ +S+G  A
Sbjct: 493 VFDSAKVDEKAMRQSYGLFA 512

dbj|BAB30802.1| unnamed protein product [Mus musculus]
(499 aa)

Score: 296 bits (758), Expect: 1.53777e-78
Length: 454, Idn/Pos/Gap = 179/263/20 (39%/57%/4%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  14 VPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLR  73

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLI-N 331
           + + + +N  GAI+I PTRELA+QI  VL     H  Q   I+ +GG N   + E+   +
Sbjct:  74 REEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133

Query: 332 GTNILVATPGRLLDHLQ-STRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +    G       + L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + I  ++
Sbjct: 194 KQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAATSTQKTPSRLENHYMICKAD 252

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+  Q++K +VF S+C  V++Y + L  +   V +L +HGK K  KR   F
Sbjct: 253 EKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY-KRNKIF 311

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 370

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E    +  + D+  +L  +   +  + +     F S++
Sbjct: 371 FLLPMEEAYINFLAINQKCPLQEMSLQRNTI-DLLPKLRAMALADRAVFEKGMKAFVSFV 429

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           QAYA H    +F + +LD A +A+ F     PR+
Sbjct: 430 QAYAKHECSLIFRLKDLDFAGLARGFALLRMPRM 463

gb|AAH59534.1| Ddx55 protein [Danio rerio]
(493 aa)

Score: 296 bits (757), Expect: 1.97515e-78
Length: 464, Idn/Pos/Gap = 176/274/22 (37%/59%/4%)

Query: 207 LTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAF 264
           +T  ++ SLP  L +  L+ ++E+GF  MT +Q+  IPL +S +D+ A A TGSGKTLAF
Sbjct:   4 ITDGKWGSLPVKLHDNILQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAF  63

Query: 265 LIPIVELLYK-AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANR 322
           +IP +E+L K  + + +   GA+II PTRELAMQI  V+        Q T+ +++GG+N 
Sbjct:  64 VIPALEILLKREEKLKKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNP 123

Query: 323 RTEAEKL-INGTNILVATPGRLLDHLQSTR-----GFVFEHLRFLVIDEADRCLEIGFEE 376
             + EKL   G NI++ATPGRL D  +            + L  LV+DEADR L++GFE 
Sbjct: 124 IEDVEKLKTQGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEA 183

Query: 377 EMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGL 431
            ++ IL  LPK R+T LFSATQT ++E L +   +  P+ +     G+ A     T   L
Sbjct: 184 SLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRN-PVRITVKEKGVAASSVQKTPAKL 242

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGK 489
              +T+  +E++F  L  FL++++ +K +VF S+C  V+++ + L  +  +V +  +HGK
Sbjct: 243 SNYYTMCRAEEKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLVKNVSIHCIHGK 302

Query: 490 QKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR 549
            K  KR   F +F   +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR
Sbjct: 303 MKH-KRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTAR 361

Query: 550 GVHGRGRAILFLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQK 608
            +  +G A++FLLP E  ++  L  + K PL  +   K+ + D+  +L+ +  G+  + +
Sbjct: 362 -IGNQGNALVFLLPMEESYVNFLSINQKCPLQSFSSVKD-VVDVLPKLKSMALGDRAMFE 419

Query: 609 SARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
                F SY+QAYA H    +F + +LD AA+A+ F     P++
Sbjct: 420 KGMRAFVSYVQAYAKHECSLIFRIKDLDFAALARGFALLRLPKM 463

ref|NP_065987.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapiens]
(600 aa)

Score: 295 bits (754), Expect: 4.15053e-78
Length: 507, Idn/Pos/Gap = 187/286/23 (36%/56%/4%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  14 VPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLR  73

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLIN- 331
           + + + ++  GAIII PTRELA+QI  VL     H  +   I+ +GG N   + E+    
Sbjct:  74 REEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQ 133

Query: 332 GTNILVATPGRLLDHLQ-STRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +    G         L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLP 193

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + +  ++
Sbjct: 194 KQRRTGLFSATQTQEVENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYYMVCKAD 252

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+ ++++K +VF S+C  V++Y + L  +   V ++ +HGK K  KR   F
Sbjct: 253 EKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY-KRNKIF 311

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 370

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E + P+   AD+  +L+ +   +  + +     F SY+
Sbjct: 371 FLLPMEESYINFLAINQKCPLQEMK-PQRNTADLLPKLKSMALADRAVFEKGMKAFVSYV 429

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWKN 678
           QAYA H    +F + +LD A++A+ F     P++      R K+           D    
Sbjct: 430 QAYAKHECNLIFRLKDLDFASLARGFALLRMPKM---PELRGKQFPDFVPVDVNTDTIPF 486

Query: 679 RDRLKDLIRKRLASGQRFRASNPHGKR 705
           +D++++  R++L   QR   +   G+R
Sbjct: 487 KDKIREKQRQKLLEQQRREKTENEGRR 513

dbj|BAC28459.1| unnamed protein product [Mus musculus]
(600 aa)

Score: 295 bits (754), Expect: 4.78306e-78
Length: 454, Idn/Pos/Gap = 179/263/20 (39%/57%/4%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  14 VPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLR  73

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLI-N 331
           + + + +N  GAI+I PTRELA+QI  VL     H  Q   I+ +GG N   + E+   +
Sbjct:  74 REEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133

Query: 332 GTNILVATPGRLLDHLQ-STRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +    G       + L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + I  ++
Sbjct: 194 KQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHYMICKAD 252

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+  Q++K +VF S+C  V++Y + L  +   V +L +HGK K  KR   F
Sbjct: 253 EKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY-KRNKIF 311

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 370

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E    +  + D+  +L  +   +  + +     F S++
Sbjct: 371 FLLPMEEAYINFLAINQKCPLQEMSLQRNTI-DLLPKLRAMALADRAVFEKGMKAFVSFV 429

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           QAYA H    +F + +LD A +A+ F     PR+
Sbjct: 430 QAYAKHECSLIFRLKDLDFAGLARGFALLRMPRM 463

ref|NP_080685.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Mus musculus]
dbj|BAC36845.1| unnamed protein product [Mus musculus]
(533 aa)

Score: 294 bits (753), Expect: 5.37572e-78
Length: 454, Idn/Pos/Gap = 178/262/20 (39%/57%/4%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  14 VPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLR  73

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLI-N 331
           + + + +N  GAI+I PTRELA+QI  VL     H  Q   I+ +GG N   + E+   +
Sbjct:  74 REEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133

Query: 332 GTNILVATPGRLLDHLQ-STRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +    G       + L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + I  ++
Sbjct: 194 KQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHYMICKAD 252

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+  Q++K +VF S+C  V++Y + L  +   V +L +HGK K  KR   F
Sbjct: 253 EKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY-KRNKIF 311

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +    +CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 312 MEFRKLQSGIQVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 370

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E    +  + D+  +L  +   +  + +     F S++
Sbjct: 371 FLLPMEEAYINFLAINQKCPLQEMSLQRNTI-DLLPKLRAMALADRAVFEKGMKAFVSFV 429

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           QAYA H    +F + +LD A +A+ F     PR+
Sbjct: 430 QAYAKHECSLIFRLKDLDFAGLARGFALLRMPRM 463

gb|AAH30020.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapiens]
(600 aa)

Score: 294 bits (753), Expect: 5.46618e-78
Length: 507, Idn/Pos/Gap = 187/286/23 (36%/56%/4%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  14 VPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLR  73

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLIN- 331
           + + + ++  GAIII PTRELA+QI  VL     H  +   I+ +GG N   + E+    
Sbjct:  74 REEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQ 133

Query: 332 GTNILVATPGRLLDHLQ-STRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +    G         L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 134 GGNIIVATPGRLEDLFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLP 193

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + +  ++
Sbjct: 194 KQRRTGLFSATQTQEVENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYYMVCKAD 252

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+ ++++K +VF S+C  V++Y + L  +   V ++ +HGK K  KR   F
Sbjct: 253 EKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKTLEVLVKGVKIMCIHGKMKY-KRNKIF 311

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 370

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E + P+   AD+  +L+ +   +  + +     F SY+
Sbjct: 371 FLLPMEESYINFLAINQKCPLQEMK-PQRNTADLLPKLKSMALADRAVFEKGMKAFVSYV 429

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWKN 678
           QAYA H    +F + +LD A++A+ F     P++      R K+           D    
Sbjct: 430 QAYAKHECNLIFRLKDLDFASLARGFALLRMPKM---PELRGKQFPDFVPVDVNTDTIPF 486

Query: 679 RDRLKDLIRKRLASGQRFRASNPHGKR 705
           +D++++  R++L   QR   +   G+R
Sbjct: 487 KDKIREKQRQKLLEQQRREKTENEGRR 513

dbj|BAB28466.1| unnamed protein product [Mus musculus]
(528 aa)

Score: 294 bits (753), Expect: 6.56756e-78
Length: 454, Idn/Pos/Gap = 179/263/20 (39%/57%/4%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  14 VPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLR  73

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLI-N 331
           + + + +N  GAI+I PTRELA+QI  VL     H  Q   I+ +GG N   + E+   +
Sbjct:  74 REEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133

Query: 332 GTNILVATPGRLLDHLQ-STRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +    G       + L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + I  ++
Sbjct: 194 KQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHYMICKAD 252

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+  Q++K +VF S+C  V++Y + L  +   V +L +HGK K  KR   F
Sbjct: 253 EKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY-KRNKIF 311

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 370

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E    +  + D+  +L  +   +  + +     F S++
Sbjct: 371 FLLPMEEAYINFLAINQKCPLQEMSLQRNTI-DLLPKLRAMALADRAVFEKGMKAFVSFV 429

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           QAYA H    +F + +LD A +A+ F     PR+
Sbjct: 430 QAYAKHECSLIFRLKDLDFAGLARGFALLRMPRM 463

ref|NP_001006185.1| similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Gallus gallus]
emb|CAG31355.1| hypothetical protein [Gallus gallus]
(591 aa)

Score: 294 bits (752), Expect: 7.6958e-78
Length: 459, Idn/Pos/Gap = 180/273/22 (39%/59%/4%)

Query: 212 FDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + SLP  LS   LR ++++GF RMT +Q+  IPL +S +D+ A A TGSGKTLAF+IPI+
Sbjct:   9 WSSLPVALSPGVLRALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPIL  68

Query: 270 E-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAE 327
           E LL + + + +   GAIII PTRELA+QI  VL     H  + ++ +++GG N   + E
Sbjct:  69 EILLRREEKLKKMQVGAIIITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVE 128

Query: 328 KLI-NGTNILVATPGRLLDHLQSTR-----GFVFEHLRFLVIDEADRCLEIGFEEEMHEI 381
           K   +G NI+VATPGRL D  +            + L  LV+DEADR L++GFE  ++ I
Sbjct: 129 KFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAI 188

Query: 382 LRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFT 436
           L  LPK R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + 
Sbjct: 189 LAFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAATNTQKTPTRLENYYM 247

Query: 437 IVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSK 494
           I  ++++F  L  FL++++++K +VF S+C  V++Y + L  +   V ++ +HGK K  K
Sbjct: 248 ICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKH-K 306

Query: 495 RTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR 554
           R   F EF R     L+CTDV ARG+DIP V W++QYDPP     ++HR GRTAR +   
Sbjct: 307 RNKIFTEFRRLAGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTAR-IGNA 365

Query: 555 GRAILFLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDG 613
           G A++FLLP E  ++  L  + K P+ E + P+  + D+  +L+ +   +  + +     
Sbjct: 366 GSALVFLLPMEESYINFLSINQKCPMQEMQ-PQRNVLDLLPKLKSMALADRAVFEKGMKA 424

Query: 614 FRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           F SY+QAYA H    +F + +LD A++AK F     P++
Sbjct: 425 FVSYIQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKM 463

dbj|BAC98212.1| mKIAA1595 protein [Mus musculus]
(615 aa)

Score: 292 bits (748), Expect: 2.07715e-77
Length: 454, Idn/Pos/Gap = 178/262/20 (39%/57%/4%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  29 VPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLR  88

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLI-N 331
           + + + +N  GAI+I PTRELA+QI  VL     H  Q   I+ +GG N   + E+   +
Sbjct:  89 REEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 148

Query: 332 GTNILVATPGRLLDHLQSTR-----GFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +            + L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 149 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 208

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + I  ++
Sbjct: 209 KQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHYMICKAD 267

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+  Q++K +VF S+C  V++Y + L  +   V +L +HGK K  KR   F
Sbjct: 268 EKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY-KRNKIF 326

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 327 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 385

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E    +  + D+  +L  +   +  + +     F S++
Sbjct: 386 FLLPMEEAYINFLAINQKCPLQEMSLQRNTI-DLLPKLRAMALADRAVFEKGMKAFVSFV 444

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           QAYA H    +F + +LD A +A+ F     PR+
Sbjct: 445 QAYAKHECSLIFRLKDLDFAGLARGFALLRMPRM 478

gb|EAL22957.1| hypothetical protein CNBA7250 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW41239.1| hypothetical protein CNA07420 [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_567058.1| hypothetical protein CNA07420 [Cryptococcus neoformans var. neoformans JEC21]
(859 aa)

Score: 292 bits (747), Expect: 2.51658e-77
Length: 470, Idn/Pos/Gap = 186/272/22 (39%/57%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  LP+S  T +G++   F   T IQ+ AIP AL  RDIL SA+TGSGKTLAFLIP++E 
Sbjct:  62 FSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLER 121

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LY  KW P +G GA++I+PTRELA+Q F  L D+  +H+ +  +V+GG   + E E+L  
Sbjct: 122 LYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYHNFSAGLVIGGKPLKEEQERL-G 180

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP----- 386
             NIL+ATPGRLL HL ST GF    ++ LV+DEADR L++GF   +  I+         
Sbjct: 181 RMNILIATPGRLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIVSHFSPVQTA 240

Query: 387 ----KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGID--AEQPVATVEGLQQGFTIVPS 440
                +RQT+LFSATQ+  +  LAK+S  + PL++  +   E+ V     L+Q + +VP 
Sbjct: 241 PGSRPSRQTLLFSATQSKDLAALAKLSLYE-PLYISCNKPGEEGVMPAN-LEQYYAVVPL 298

Query: 441 EQRFRLLFTFLKRNQRKKIIVFMSS---CNGVKFYAELLNYID--VPVLDLHGKQKQSKR 495
           E++   L+ F+K + + K IVF++S      V+F  E    +   +P++ LHGKQKQ  R
Sbjct: 299 ERKLDALWGFVKSHLKMKGIVFVTSGKQARRVRFIFETFRRLHPGLPLMHLHGKQKQPTR 358

Query: 496 TSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRG 555
              F  F+  + A L+CTDVAARGLD PAVDW++Q D PD+   YIHRVGRTAR     G
Sbjct: 359 LDIFQRFSSSKSALLICTDVAARGLDFPAVDWVIQLDCPDDVDTYIHRVGRTAR-YQSAG 417

Query: 556 RAILFLLPS-EVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGF 614
            A+  L PS E G      +  + +   +  + K+ +++  ++        ++   +  F
Sbjct: 418 TALTILCPSEEEGMKTRWGEKAIEVKRIKIKEGKMGNLKQSMQNFAFKEPEIKYLGQRAF 477

Query: 615 RSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIR 664
            SY+++      K +F +  L   A A+S G    P+I L   ++A K+R
Sbjct: 478 ISYMKSVHIQKDKSIFKIDALPAEAFAESMGLPGAPQIKLGN-QKAAKVR 526

gb|AAM34647.1| ATP-dependent RNA helicase [Danio rerio]
ref|NP_775336.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Danio rerio]
(593 aa)

Score: 290 bits (742), Expect: 1.12997e-76
Length: 457, Idn/Pos/Gap = 175/270/22 (38%/59%/4%)

Query: 214 SLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           SLP  L +  L+ ++E+GF  MT +Q+  IPL +S +D+ A A TGSGKTLAF+IP +E+
Sbjct:  11 SLPVKLHDNILQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEI  70

Query: 272 LYK-AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKL 329
           L K  + + +   GA+II PTRELAMQI  V+        Q T+ +++GG+N   + EKL
Sbjct:  71 LLKREEKLKKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKL 130

Query: 330 -INGTNILVATPGRLLDHLQSTR-----GFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
              G NI++ATPGRL D  +            + L  LV+DEADR L++GFE  ++ IL 
Sbjct: 131 KTQGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILG 190

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIV 438
            LPK R+T LFSATQT ++E L +   +  P+ +     G+ A     T   L   +T+ 
Sbjct: 191 YLPKQRRTGLFSATQTQELEKLVRAGLRN-PVRITVKEKGVAASSVQKTPAKLSNYYTMC 249

Query: 439 PSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRT 496
            +E++F  L  FL++++ +K +VF S+C  V+++ + L  +  +V +  +HGK K  KR 
Sbjct: 250 RAEEKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLVKNVSIHCIHGKMKH-KRN 308

Query: 497 STFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGR 556
             F +F   +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR +  +G 
Sbjct: 309 KIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTAR-IGNQGN 367

Query: 557 AILFLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFR 615
           A++FLLP E  ++  L  + K PL  +   K+ + D+  +L+ +  G+  + +     F 
Sbjct: 368 ALVFLLPMEESYVNFLSINQKCPLQSFSSVKD-VVDVLPKLKAMALGDRAMFEKGMRAFV 426

Query: 616 SYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           SY+QAYA H    +F + +LD AA+A+ F     P++
Sbjct: 427 SYVQAYAKHECSLIFRIKDLDFAALARGFALLRLPKM 463

dbj|BAD92629.1| Hypothetical protein FLJ33908 variant [Homo sapiens]
(246 aa)

Score: 289 bits (740), Expect: 1.68656e-76
Length: 191, Idn/Pos/Gap = 128/166/0 (67%/86%/0%)

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQTMLFSATQT KVEDLA++S +++PL++G+D ++  ATV+GL+QG+ + PSE+RF LLF
Sbjct:  18 RQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLF  77

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           TFLK+N++KK++VF SSC  VK++ ELLNYID+PVL +HGKQKQ+KRT+TFF+F   +  
Sbjct:  78 TFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 137

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
           TLLCTDVAARGLDIP VDWIVQYDPPD+PKEYIHRVGRTARG++GRG A+L L P E+GF
Sbjct: 138 TLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGF 197

Query: 569 LQHLRDAKVPL 579
           L++L+ +KV +
Sbjct: 198 LRYLKQSKVKI 208

ref|XP_222149.3| PREDICTED: similar to mKIAA1595 protein [Rattus norvegicus]
(665 aa)

Score: 288 bits (736), Expect: 4.98972e-76
Length: 454, Idn/Pos/Gap = 177/262/20 (38%/57%/4%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  79 VPLHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLR 138

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLING 332
           + + + +N  GAI+I PTRELA+QI  VL     H  Q   I+ +GG N   + E+  + 
Sbjct: 139 REEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKHQ 198

Query: 333 T-NILVATPGRLLDHLQSTR-----GFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           + NI+VATPGRL D  +            + L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 199 SGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINTILEFLP 258

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + I  ++
Sbjct: 259 KQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHYMICKAD 317

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+  Q++K +VF S+C  V++Y + L  +   V +L +HGK K  KR   F
Sbjct: 318 EKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALVQRVKILCIHGKMKY-KRNKIF 376

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 377 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 435

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E    +  + D+  +L  +   +  + +     F S++
Sbjct: 436 FLLPMEEAYINFLAINQKCPLQEMSLQRNTV-DLLPKLRAMALADRAVFEKGMKAFVSFV 494

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           QAYA H    +F + +LD A +A+ F     PR+
Sbjct: 495 QAYAKHECSLIFRLKDLDFAGLARGFALLRMPRM 528

gb|AAH77172.1| Ddx55-prov protein [Xenopus laevis]
(594 aa)

Score: 287 bits (735), Expect: 6.90873e-76
Length: 466, Idn/Pos/Gap = 182/273/26 (39%/58%/5%)

Query: 207 LTPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAF 264
           +T   +DSLP  L+    R +EE+ F  MT +Q+  IPL ++ +DI A A TGSGKTLAF
Sbjct:   4 VTEGTWDSLPQKLNGSIRRTLEELKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAF  63

Query: 265 LIPIVELLYK-AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANR 322
           +IP++E+L K  + + +N  GA+II PTRELA+QI  VL     H  Q ++ +++GG+N 
Sbjct:  64 VIPLLEILLKREEKLKKNQVGALIITPTRELAVQIDEVLSCFTKHFPQFSQILLIGGSNP 123

Query: 323 RTEAEKLI-NGTNILVATPGRLLDHLQSTRG-----FVFEHLRFLVIDEADRCLEIGFEE 376
             +  K   +G NI+VATPGRL D  +            + L  L++DEADR L++GFE 
Sbjct: 124 VDDVRKFKEHGGNIIVATPGRLEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEA 183

Query: 377 EMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGL 431
            ++ IL  LPK R+T LFSATQT ++E+L +   +  P+ +     G+ A     T   L
Sbjct: 184 SINTILGFLPKQRRTGLFSATQTQELENLVRAGLRN-PVRIAVKEKGVAATSTQKTPIRL 242

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPV--LDLHGK 489
           Q  + I  ++++F  L  FL++ +++K +VF S+C  V++Y + L  +  PV  + +HGK
Sbjct: 243 QNYYMICKADEKFNKLIAFLQKRKQEKHLVFFSTCACVEYYGKALEMLLKPVKVMCIHGK 302

Query: 490 QKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR 549
            K  KR   F EF +     L+CTDV ARG+DI  V+W+VQYDPP     ++HR GRTAR
Sbjct: 303 MKH-KRNRIFTEFRKINSGILVCTDVMARGIDIHEVNWVVQYDPPSSASAFVHRCGRTAR 361

Query: 550 GVHGRGRAILFLLPSEVGFLQHLR-DAKVPLNEYEFPKEKL--ADIQTQLEKLVEGNYYL 606
             H  G A++FLLP E  ++  L  + K PL E     E +   D+  +L+ + E +  +
Sbjct: 362 IGH-HGSALVFLLPMEESYVSFLSINQKCPLQEM---TELIISVDLLPKLKAMAETDRAV 417

Query: 607 QKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
            +     F SY+QAYA H    +F V +LD +++A+ FG    PR+
Sbjct: 418 FEKGMKAFVSYVQAYAKHECNLIFRVKDLDFSSLARGFGLLRMPRM 463

gb|AAH43052.1| Ddx55 protein [Mus musculus]
(602 aa)

Score: 287 bits (735), Expect: 7.20305e-76
Length: 454, Idn/Pos/Gap = 176/261/24 (38%/57%/5%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  20 VPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLR  79

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLI-N 331
           + + + +N  GAI+I PTRELA+QI  VL     H  Q   I+ +GG N   + E+   +
Sbjct:  80 REEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 139

Query: 332 GTNILVATPGRLLDHLQSTR-----GFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +            + L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 140 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 199

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + I  ++
Sbjct: 200 KQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHYMICKAD 258

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+  Q++K +VF S+C  V++Y + L  +   V +L +HGK K  KR   F
Sbjct: 259 EKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY-KRNKIF 317

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 318 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 376

Query: 560 FLLPSEVGFLQHLRDAKVPLNEYEFPKEK-LADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L      +N+ E   ++   D+  +L  +   +  + +     F S++
Sbjct: 377 FLLPMEEAYINFL-----AINQKEMSLQRNTIDLLPKLRAMALADRAVFEKGMKAFVSFV 431

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           QAYA H    +F + +LD A +A+ F     PR+
Sbjct: 432 QAYAKHECSLIFRLKDLDFAGLARGFALLRMPRM 465

emb|CAH56233.1| hypothetical protein [Homo sapiens]
(532 aa)

Score: 281 bits (720), Expect: 4.15535e-74
Length: 507, Idn/Pos/Gap = 185/281/28 (36%/55%/5%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  14 VPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLR  73

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLIN- 331
           + + + ++  GAIII PTRELA+QI  VL     H  +   I+ +GG N   + E+    
Sbjct:  74 REEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQ 133

Query: 332 GTNILVATPGRLLDHLQ-STRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D  +    G         L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLP 193

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + +  ++
Sbjct: 194 KQRRTGLFSATQTQEVENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYYMVCKAD 252

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+ ++++K +VF S+C  V++Y + L  +   V ++ +HGK K  KR   F
Sbjct: 253 EKFNQLVHFLRSHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY-KRNKIF 311

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            EF + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++
Sbjct: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALV 370

Query: 560 FLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYL 618
           FLLP E  ++  L  + K PL E + P+   AD+  +L+ +   +  + +     F SY+
Sbjct: 371 FLLPMEESYINFLAINQKCPLQEMK-PQRNTADLLPKLKSMALADRAVFEKGMKAFVSYV 429

Query: 619 QAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWKN 678
           QAYA H    +F +  L     A+ F     P++      R K+           D    
Sbjct: 430 QAYAKHECNLIFRLKGL-----ARGFALLRMPKM---PELRGKQFPDFVPVDVNTDTIPF 481

Query: 679 RDRLKDLIRKRLASGQRFRASNPHGKR 705
           +D++++  R++L   QR   +   G+R
Sbjct: 482 KDKIREKQRQKLLEQQRREKTENEGRR 508

gb|EAK89877.1| Hca4p helicase DBP4 (helicase CA4). EIF4A-1-family RNA SFII helicase [Cryptosporidium parvum]
(770 aa)

Score: 281 bits (719), Expect: 4.86919e-74
Length: 495, Idn/Pos/Gap = 172/273/43 (34%/55%/8%)

Query: 206 LLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFL 265
           +++P  F  LP+S  TL G+   G+ +MT IQ   +P +L GRDI+  ARTGSGKTLA++
Sbjct:  67 IMSPDLFSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYV 126

Query: 266 IPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRA-IVMGGANRRT 324
           IPI+E +Y+  +   +G  ++I+ PTRELA Q+F V+ ++   H    A  ++GG + ++
Sbjct: 127 IPILENIYRDNYCSIDGLLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDIKS 186

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           E+ + IN  NILVATPGRL+ H+  +  +   +L+ LVIDE DR L++GF  ++  IL  
Sbjct: 187 ESSR-INMLNILVATPGRLIQHMDESPLWDANNLKILVIDEVDRMLDMGFLNDIKIILDG 245

Query: 385 LPKT---RQTMLFSATQTTKVEDLAKVSFQQKPLHL-GIDAEQPVATVEGLQQGFTIVPS 440
           +P +   RQTMLFSAT  +    + K+    +P  L     +   A  + LQQ +  V  
Sbjct: 246 IPSSSSGRQTMLFSATVYSSELSIKKIENLFRPNQLESFSLDNIGALPKNLQQLYIKVAI 305

Query: 441 EQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV--PVLDLHGKQKQSKRTST 498
            ++   LF FL+ +  KKIIVF+S C  V+F + +   + +   VL+L+GKQ   KR   
Sbjct: 306 HEKIDTLFNFLRTHSNKKIIVFVSCCKQVRFLSTVFTKLKIGCKVLELYGKQSLQKRLEV 365

Query: 499 FFEFARREH-----------------------ATLLCTDVAARGLDIPAVDWIVQYDPPD 535
              F   E                        A L CTD+A+RGLD P +DW++Q D P+
Sbjct: 366 VHNFYTHESLVTSNEKLKLKNIGRNSKSSYDGAVLFCTDIASRGLDFPKIDWVIQLDIPE 425

Query: 536 EPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRD------AKVPLNEYEFPKEKL 589
               Y+HR+GRTAR +  +G+++LF++ +E  FL+ L +       KV  NEYE      
Sbjct: 426 NADTYVHRIGRTARYI-SKGKSLLFVMSNEGYFLKSLYEKGINTIKKVTPNEYEMRYT-- 482

Query: 590 ADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF-NVHELDIAAVAKSFGFSA 648
             I + L+ +   +  +++ A   F +Y+++    +  D    + +LD +A A S G + 
Sbjct: 483 --IHSSLQSICASDQNIKEMAERAFSAYIKSLFILTPNDKREELKKLDFSAFALSLGLAI 540

Query: 649 PPRICLDVLERAKKI 663
           PP+I ++  E  K++
Sbjct: 541 PPKIKINNTESEKRL 555

gb|EAA01795.2| ENSANGP00000009871 [Anopheles gambiae str. PEST]
ref|XP_321934.2| ENSANGP00000009871 [Anopheles gambiae str. PEST]
(501 aa)

Score: 273 bits (699), Expect: 1.04102e-71
Length: 456, Idn/Pos/Gap = 179/263/21 (39%/57%/4%)

Query: 214 SLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLY 273
           S PLS P L  I+ +GF +MT +Q   IPL LS +D+ A A TGSGKTLAFL+P++ELL 
Sbjct:  12 STPLSAPVLEVIKRLGFDKMTPVQGATIPLLLSYKDVAAEAVTGSGKTLAFLVPLLELLL  71

Query: 274 KAK----WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHH----QTRAIVMGGANRRTE 325
           K K    W  ++  GA+I++PTRELA QI  VL +  +H      + + ++ G +     
Sbjct:  72 KRKRSEAW-KKHEIGAVIVSPTRELATQIHDVLSEFLAHDELRCFRQKMLIGGNSVEEDV 130

Query: 326 AEKLINGTNILVATPGRLLDHLQSTRGFVF----EHLRFLVIDEADRCLEIGFEEEMHEI 381
              L  G NILVATPGRL D  +           ++L  LV+DEADR L++GFE  ++ I
Sbjct: 131 MSILKQGANILVATPGRLQDLFERKGDLNLAAKVKNLELLVLDEADRLLDMGFEATINTI 190

Query: 382 LRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSE 441
           L  LP  R+T LFSATQT +V+DL +   +  P+ + +  +   +T + LQ  + IV  E
Sbjct: 191 LAYLPCQRRTGLFSATQTKEVKDLMRAGLRN-PVLVSVREKATTSTPKLLQNYYLIVEPE 249

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           Q+   +  F+   Q KK ++F+ +C  V++++  +  +   + VL LHGK K S+R    
Sbjct: 250 QKMVAMLEFISSQQIKKAMLFLPTCACVEYWSVAMAALVPSMQVLGLHGKMK-SQRFGIL 308

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
             F   + A LLCTDV ARG+DIP VDW++Q+DPP     ++HRVGRTAR     G A++
Sbjct: 309 QTFREADSALLLCTDVLARGVDIPEVDWVLQWDPPSSAAAFVHRVGRTARQ-GSEGNALI 367

Query: 560 FLLPSEVGFLQHL-RDAKVPLNEYEF--PKEKLADIQTQLEKLVEGNYYLQKSARDGFRS 616
            LLP+E  ++  L R+ KV L E E   P+ +LA+    L +L + +      A   F S
Sbjct: 368 MLLPTEDAYVDFLTRNQKVSLKEVELEIPEARLAETLRTLHQLQKTDRATFDQANRAFVS 427

Query: 617 YLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           ++QAY+ H    +  + +LD+  VA S+G    PR+
Sbjct: 428 HVQAYSKHECNLILRLKDLDLGKVATSYGLLQLPRM 463

emb|CAG05302.1| unnamed protein product [Tetraodon nigroviridis]
(599 aa)

Score: 273 bits (699), Expect: 1.1897e-71
Length: 459, Idn/Pos/Gap = 172/267/22 (37%/58%/4%)

Query: 212 FDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           ++SLP  L++  L  + E+ F+ MT +Q+  IPL +S +D+ A A TGSGKTLAF+IPI+
Sbjct:   9 WNSLPVKLNDGILETLGELKFSHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPII  68

Query: 270 ELLYK-AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAE 327
           ELL K  + + +   GA++I PTRELA+QI  V+        Q T+ +++GG+N   + E
Sbjct:  69 ELLLKREEKLKKMQVGALVITPTRELALQISQVMEQFLQRFPQFTQILLIGGSNPIEDVE 128

Query: 328 KLIN-GTNILVATPGRLLDHLQSTRGFV-----FEHLRFLVIDEADRCLEIGFEEEMHEI 381
           K  + G NI++ATPGRL D  +     +      + L  LV+DEADR L++GFE  ++ I
Sbjct: 129 KFKDQGANIVIATPGRLEDMFKRKADGLDLACWVKSLEVLVLDEADRLLDMGFEASLNAI 188

Query: 382 LRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA-----TVEGLQQGFT 436
           L  LPK R+T LFSATQT ++E L +   +  P+ + +  +   A     T   L   +T
Sbjct: 189 LGHLPKQRRTGLFSATQTQELEKLVRAGLRN-PVRITVKEKGAAASAVQKTPSRLSNYYT 247

Query: 437 IVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSK 494
           I  SE +F  L  FL++++ +K +VF S+C  V+++   L  +     V  +HGK K  K
Sbjct: 248 ICRSEDKFNHLVAFLRQHKHEKNLVFFSTCACVEYFGRALETLIKKANVCCIHGKMK-DK 306

Query: 495 RTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR 554
           R   F EF   +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR +  +
Sbjct: 307 RNKIFAEFRSLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRTAR-IGNQ 365

Query: 555 GRAILFLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDG 613
           G A++FLLP E  ++  L  + K PL +   P + + D+  +++ +   +  +   +   
Sbjct: 366 GNALVFLLPMEESYVNFLSINQKCPLQKM-LPIKDVVDVLPRVKAMSLADRAVFDRSMRA 424

Query: 614 FRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           F SY+QAYA H    +F V +LD  ++A+ F     P++
Sbjct: 425 FVSYVQAYAKHECSLIFRVRDLDFGSLARGFALLRLPKM 463

ref|NP_177293.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
gb|AAG51820.1| putative ATP-dependent RNA helicase; 76692-78838 [Arabidopsis thaliana]
(558 aa)

Score: 273 bits (698), Expect: 1.52809e-71
Length: 453, Idn/Pos/Gap = 165/250/15 (36%/55%/3%)

Query: 211 RFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI 268
           RF  L  PLSE  +  ++  GF   T +QA  IP   S +D++  A TGSGKTLAFL+P 
Sbjct:  15 RFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPF  74

Query: 269 VELLYKAKWMPR--NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           +E++ ++   P   +    +II+PTREL+ QI  V     S      ++++ G  R  EA
Sbjct:  75 IEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGG-REVEA 133

Query: 327 EKLI---NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
           +       G N+L+ TPGRL D ++      F +L  L++DEADR L++GF+++++ I+ 
Sbjct: 134 DMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIIS 193

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
            LPK R+T LFSATQT  V DLAK   +   + +   AE    T  GL   +    ++Q+
Sbjct: 194 RLPKQRRTGLFSATQTQAVADLAKAGLRNA-MEVISGAESKSKTSSGLYCEYLKCEADQK 252

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI----DVPVLDLHGKQKQSKRTSTF 499
              L   L  N+ KK++VF  +C  V ++  +L+ I     +     HGK  Q  R +  
Sbjct: 253 SSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTAL 312

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
             F       LLCTDVAARGLDIP +D++VQYDPP +P  +IHRVGRTAR +  +GRAI+
Sbjct: 313 ASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTAR-MERQGRAIV 371

Query: 560 FLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQ 619
           FL+P E  +++ +R  +VPL E +   E  +D+   +  L   +  + +     F S+++
Sbjct: 372 FLMPKETDYVEFMRIRRVPLQERKC-SENASDVIPIIRSLAIKDRAVLEKGLQAFVSFVR 430

Query: 620 AYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           AY  H    +F+   L+I  +A  +G  + P I
Sbjct: 431 AYKEHHCSYIFSWKGLEIGKLAMGYGILSFPYI 463

dbj|BAC42912.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
(558 aa)

Score: 272 bits (695), Expect: 3.15795e-71
Length: 453, Idn/Pos/Gap = 165/250/15 (36%/55%/3%)

Query: 211 RFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI 268
           RF  L  PLSE  +  ++  GF   T +QA  IP   S +D++  A TGSGKTLAFL+P 
Sbjct:  15 RFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPF  74

Query: 269 VELLYKAKWMPR--NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           +E++ ++   P   +    +II+PTREL+ QI  V     S      ++++ G  R  EA
Sbjct:  75 IEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGG-REVEA 133

Query: 327 EKLI---NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
           +       G N+L+ TPGRL D ++      F +L  L++DEADR L++GF+++++ I+ 
Sbjct: 134 DMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIIS 193

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
            LPK R+T LFSATQT  V DLAK   +   + +   AE    T  GL   +    ++Q+
Sbjct: 194 RLPKQRRTGLFSATQTQAVADLAKAGLRNA-MEVISGAESKSKTSSGLYCEYLKCEADQK 252

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI----DVPVLDLHGKQKQSKRTSTF 499
              L   L  N+ KK++VF  +C  V ++  +L+ I     +     HGK  Q  R +  
Sbjct: 253 SSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTAL 312

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
             F       LLCTDVAARGLDIP +D++VQYDPP +P  +IHRVGRTAR +  +GRAI+
Sbjct: 313 ASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTAR-MERQGRAIV 371

Query: 560 FLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQ 619
           FL+P E  +++ +R  +VPL E +   E  +D+   +  L   +  + +     F S+++
Sbjct: 372 FLMPKETDYVEFMRIRRVPLQERKC-SENASDVIPIIRSLAIKDRAVLEKGLQAFVSFVR 430

Query: 620 AYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           AY  H    +F+   L+I  +A  +G  + P I
Sbjct: 431 AYKEHHCSYIFSWKGLEIGKLAMGYGILSFPYI 463

ref|NP_909393.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
dbj|BAB64789.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
dbj|BAC00580.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
(647 aa)

Score: 271 bits (693), Expect: 5.9539e-71
Length: 467, Idn/Pos/Gap = 174/260/25 (37%/55%/5%)

Query: 208 TPHRFDSLP--LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFL 265
           T  RF  L   LS   ++ ++  GF R T +QA AIPL LS +D+   A TGSGKTLAF+
Sbjct:  19 TEQRFSELSPALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFV  78

Query: 266 IPIVELLYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDL-ASHHHQTRAIVMGGANRR 323
           +P+VE+L +    P+ +    III+PTREL+ QI+ V     A+    +  +++GG + +
Sbjct:  79 VPVVEILRRRPSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIK 138

Query: 324 TEAEKLIN-GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEIL 382
            E +KL   G NILV TPG+L D ++      +++L  L++DEADR L++GF++++  I+
Sbjct: 139 AELKKLEEEGANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSII 198

Query: 383 RILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAE-------------QPVATVE 429
             LPK R+T LFSATQT  V++LAK   +  P+ + +  E              P  T  
Sbjct: 199 SKLPKLRRTGLFSATQTEAVKELAKAGLRN-PVRVEVKTEVKPTGKDGAQQELGPSKTPL 257

Query: 430 GLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV----PVLD 485
           GL+  + I  +  +   L  FL +N  KKI+V+ ++C  V ++A +L  +D     P++ 
Sbjct: 258 GLRLEYMICEASNKSSQLVDFLVQNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIP 317

Query: 486 LHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVG 545
            HGK KQ  R      F+      L+CTDVAARGLDIP VD IVQYDPP +P  +IHR G
Sbjct: 318 YHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAG 377

Query: 546 RTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYY 605
           RTAR     G AI+FLLP E  +++ L+   VPL E E     + DI  Q+      +  
Sbjct: 378 RTAR-YDQEGDAIVFLLPKEDTYVEFLKRRGVPLTERECSTNAV-DIVPQIRSAALEDRN 435

Query: 606 LQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           + +     F S+++AY  H    +F+  +L+I  +   +G    P +
Sbjct: 436 VMEKGLTAFVSFVRAYKEHHCSYIFSWKDLEIGRLGMEYGLLQIPSM 482

ref|NP_649777.1| CG9630-PA [Drosophila melanogaster]
gb|AAF54208.1| CG9630-PA [Drosophila melanogaster]
gb|AAK92937.1| GH16590p [Drosophila melanogaster]
(613 aa)

Score: 268 bits (684), Expect: 5.76014e-70
Length: 467, Idn/Pos/Gap = 176/260/30 (37%/55%/6%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
            D  PLS+  L+ ++  GF +MT +Q  AIPL L+ +D+ A A TGSGKTLAFL+P++E+
Sbjct:   9 LDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEI  68

Query: 272 LYK----AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHH---HQTRAIVMGGANRRT 324
           L +      W P+   GA++I+PTRELA QI  VL     H    H  + +++GG +   
Sbjct:  69 LQRRHKETPWGPKE-IGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEE 127

Query: 325 EAEKLINGTN-ILVATPGRLLDHLQS-----TRGFVFEHLRFLVIDEADRCLEIGFEEEM 378
           +   L   T  ILV TPGRL D  Q            + L FLV+DEADR L++GF+  +
Sbjct: 128 DIATLRRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSV 187

Query: 379 HEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIV 438
           + IL  LP+ R+T LFSATQTT+V DL +   +  P+ + +  +  V T   LQ  + IV
Sbjct: 188 NNILGYLPRQRRTGLFSATQTTEVTDLIRAGLRN-PVLVSVKEKASVNTPARLQNFYRIV 246

Query: 439 PSEQRFRLLFTFLKRNQR--KKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSK 494
             E +F  L  FL        K++VF  +C  V+++AE L  +     VL +HGK K +K
Sbjct: 247 EPELKFVALLEFLSSPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTVLGIHGKMK-NK 305

Query: 495 RTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR 554
           R +   +F     A LLCTDV ARGLD+P ++W+VQ+DPP     ++HRVGRTAR     
Sbjct: 306 RANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQ-GNE 364

Query: 555 GRAILFLLPSEVGFLQHLR-DAKVPLN--------EYEFPKEKLADIQTQLEKLVEGNYY 605
           G A++FLLPSE  ++  L+ + KV L         + +  K+KL  +  QL +L   +  
Sbjct: 365 GNALVFLLPSEDAYVHFLKINQKVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKG 424

Query: 606 LQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           +       F S+++AY  H    +  + +LD+  +A ++G    PR+
Sbjct: 425 VYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGKMATAYGLLQLPRM 471

gb|AAH66017.1| Ddx31 protein [Mus musculus]
(714 aa)

Score: 268 bits (684), Expect: 6.00553e-70
Length: 611, Idn/Pos/Gap = 199/306/107 (32%/50%/17%)

Query: 137 PAPVMETELQNAAARTPADEEVASS-RATVHEMEPLAR-------------PCPEVTQ-- 180
           P     +E+ +  A+  +D+E   + + + H+  P  +             PC + +   
Sbjct:  46 PPAKRRSEISSVLAKKASDKETQRTFKGSTHKTFPPKKYLDSIGNGRQEEKPCIKTSSLF 105

Query: 181 KSSPALQSLSS---EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEE-MGFARMTEI 236
           K++P +  L S   + A EQ        + +P  F  L L    +  I   +  + MT +
Sbjct: 106 KNNPEIPELHSTVVKQAREQ--------VFSPEAFQELDLHPHLISTINTVLKMSSMTSV 157

Query: 237 QARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAKWMPRNGTGAIIIAPTREL 294
           Q ++IP+ L GRD L  ++TGSGKTLA+ +P+V+ L    +K    +G  A+++ PTREL
Sbjct: 158 QKQSIPVLLEGRDALVRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYALVLVPTREL 217

Query: 295 AMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGF 353
           A+Q F  +  L          ++MGG  R++E  +L  G NIL++TPGRL+DH++ST+  
Sbjct: 218 ALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNL 277

Query: 354 VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTMLFSATQTTKVEDLAKVSF 410
            F  +R+L++DEADR L++GFE+++  IL  +    + RQ +L SAT T  V  L  +S 
Sbjct: 278 HFNRIRWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLVDISL 337

Query: 411 QQKPLHLGI---DAEQP----VATV--------EGLQQGFTIVPSEQRFRLLFTFL---- 451
              P+ + +   +  QP    VA++        E L Q   +VPS+ R   L  F+    
Sbjct: 338 HN-PVSISVLDKNCNQPNPKEVASIQLNSFAIPESLDQHVVLVPSKLRLVCLAAFILQKC 396

Query: 452 KRNQRKKIIVFMSSCNGVKFYAEL-----LNYIDVPV-------------LDLHGKQKQS 493
           K  + +K+IVF SSC  V+F+  L     L +   P              L LHG  +Q 
Sbjct: 397 KFEKNQKMIVFFSSCELVEFHYSLFLHTLLCHSGTPTSEHLPSASWPLKFLRLHGNMEQE 456

Query: 494 KRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVH 552
           +RTS F EF+  E   LLCTDVA+RGLD+P V WIVQY  P  P EYIHR+GRTAR G H
Sbjct: 457 ERTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYSAPSSPAEYIHRIGRTARIGCH 516

Query: 553 GRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP--------------------------- 585
             G ++L L PSE  ++  L   K+ + E +                             
Sbjct: 517 --GSSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAKDDCFKRRQRGAQKSRASGP 574

Query: 586 ---KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH--SMKDVFNVHELDIAAV 640
              +E+   +QT  E  V  +  +   A+   +S+++AYA++   +K +F+V  L +  V
Sbjct: 575 QEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRALHLGHV 634

Query: 641 AKSFGFSAPPR 651
           AKSFG    PR
Sbjct: 635 AKSFGLRDAPR 645

ref|XP_355323.1| similar to Ddx31 protein [Mus musculus]
(687 aa)

Score: 268 bits (684), Expect: 6.15775e-70
Length: 611, Idn/Pos/Gap = 199/306/107 (32%/50%/17%)

Query: 137 PAPVMETELQNAAARTPADEEVASS-RATVHEMEPLAR-------------PCPEVTQ-- 180
           P     +E+ +  A+  +D+E   + + + H+  P  +             PC + +   
Sbjct:  19 PPAKRRSEISSVLAKKASDKETQRTFKGSTHKTFPPKKYLDSIGNGRQEEKPCIKTSSLF  78

Query: 181 KSSPALQSLSS---EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEE-MGFARMTEI 236
           K++P +  L S   + A EQ        + +P  F  L L    +  I   +  + MT +
Sbjct:  79 KNNPEIPELHSTVVKQAREQ--------VFSPEAFQELDLHPHLISTINTVLKMSSMTSV 130

Query: 237 QARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAKWMPRNGTGAIIIAPTREL 294
           Q ++IP+ L GRD L  ++TGSGKTLA+ +P+V+ L    +K    +G  A+++ PTREL
Sbjct: 131 QKQSIPVLLEGRDALVRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYALVLVPTREL 190

Query: 295 AMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGF 353
           A+Q F  +  L          ++MGG  R++E  +L  G NIL++TPGRL+DH++ST+  
Sbjct: 191 ALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNL 250

Query: 354 VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTMLFSATQTTKVEDLAKVSF 410
            F  +R+L++DEADR L++GFE+++  IL  +    + RQ +L SAT T  V  L  +S 
Sbjct: 251 HFNRIRWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLVDISL 310

Query: 411 QQKPLHLGI---DAEQP----VATV--------EGLQQGFTIVPSEQRFRLLFTFL---- 451
              P+ + +   +  QP    VA++        E L Q   +VPS+ R   L  F+    
Sbjct: 311 HN-PVSISVLDKNCNQPNPKEVASIQLNSFAIPESLDQHVVLVPSKLRLVCLAAFILQKC 369

Query: 452 KRNQRKKIIVFMSSCNGVKFYAEL-----LNYIDVPV-------------LDLHGKQKQS 493
           K  + +K+IVF SSC  V+F+  L     L +   P              L LHG  +Q 
Sbjct: 370 KFEKNQKMIVFFSSCELVEFHYSLFLHTLLCHSGTPTSEHLPSASWPLKFLRLHGNMEQE 429

Query: 494 KRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVH 552
           +RTS F EF+  E   LLCTDVA+RGLD+P V WIVQY  P  P EYIHR+GRTAR G H
Sbjct: 430 ERTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYSAPSSPAEYIHRIGRTARIGCH 489

Query: 553 GRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP--------------------------- 585
             G ++L L PSE  ++  L   K+ + E +                             
Sbjct: 490 --GSSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAKDDCFKRRQRGAQKSRASGP 547

Query: 586 ---KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH--SMKDVFNVHELDIAAV 640
              +E+   +QT  E  V  +  +   A+   +S+++AYA++   +K +F+V  L +  V
Sbjct: 548 QEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRALHLGHV 607

Query: 641 AKSFGFSAPPR 651
           AKSFG    PR
Sbjct: 608 AKSFGLRDAPR 618

dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
ref|NP_196164.1| DEAD/DEAH box helicase, putative (RH18) [Arabidopsis thaliana]
(593 aa)

Score: 267 bits (682), Expect: 1.04163e-69
Length: 465, Idn/Pos/Gap = 164/253/22 (35%/54%/4%)

Query: 207 LTPHRFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAF 264
           LT  RF  L  PLS   +  + +  F   T +QA  IPL  S +D+   A TGSGKTLAF
Sbjct:  11 LTETRFSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAF  70

Query: 265 LIPIVELLYKAKWMPR--NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR 322
           ++P+VE+L ++   P   +    +II+PTREL+ QI+ V     S      ++++ G   
Sbjct:  71 VVPLVEILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGRE 130

Query: 323 RTEAEKLIN--GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHE 380
                K+I   G N+L+ TPGRL D ++      F +L  L++DEADR LE+GF+ +++ 
Sbjct: 131 VKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNY 190

Query: 381 ILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPV---------ATVEGL 431
           I+  LPK R+T LFSATQT  VE+LAK   +  P+ + + A+             T  GL
Sbjct: 191 IISRLPKQRRTGLFSATQTEGVEELAKAGLRN-PVRVEVRAKSKSESSQQLTNSKTPSGL 249

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI----DVPVLDLH 487
              +    ++++   L   L +N  KK+IVF  +C  V ++  +L+ I     + ++ +H
Sbjct: 250 HLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIH 309

Query: 488 GKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRT 547
           G  KQ+ R      F +     LLCTDVAARGLDIP +D++VQYDPP +P  + HR GRT
Sbjct: 310 GDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRT 369

Query: 548 ARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQ 607
           AR +  +GRAI+FLLP E  +++ +R  +VPL E +   E  +D+   +      +  + 
Sbjct: 370 AR-LGRQGRAIVFLLPKEEAYVEFMRIRRVPLEERKC-SEDASDVIPIIRSAAMKDRAVM 427

Query: 608 KSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           +     F S+++AY  H    +F   +L+I  +A  +G    P +
Sbjct: 428 EKGLKAFVSFVRAYKEHHCSFIFRWKDLEIGKLAMGYGLLYLPSM 472

gb|AAD32817.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
pir||G84832 ATP-dependent RNA helicase [imported] - Arabidopsis thaliana
ref|NP_181602.1| DEAD/DEAH box helicase, putative (RH17) [Arabidopsis thaliana]
(609 aa)

Score: 266 bits (680), Expect: 1.63451e-69
Length: 568, Idn/Pos/Gap = 197/280/102 (34%/49%/17%)

Query: 185 ALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEE-MGFARMTEIQARAIPL 243
           A QS        ++  K  SGL     F SL L       ++E MGF   T +QA+AIP+
Sbjct:   4 AQQSARETKQEAKDASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPV  63

Query: 244 ALSGRDILASARTGSGKTLAFLIPIVELL--YKAKWMPRNGTGAIIIAPTRELAMQIFGV 301
            LSGRD+L +A TG+GKT+A+L P++  L  +  K    +GT A++I PTREL +Q++  
Sbjct:  64 ILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYET 123

Query: 302 LHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRF 360
           L  L    H      VMGG  +  E  +L  G +IL+ATPGRLLDHL++T  FV ++LR+
Sbjct: 124 LEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRW 183

Query: 361 LVIDEADRCLEIGFEEEMHEILRIL--------------PK--TRQTMLFSATQTTKVED 404
           ++ DEAD  LE+G+ +E+ +I+++L              PK   +Q +L SAT   KV D
Sbjct: 184 VIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVND 243

Query: 405 LAKVSFQQKPLHLGID---------AEQPVA------------------------TVEGL 431
           LAK+S    P+ +G+D          E P A                            L
Sbjct: 244 LAKLSLDD-PVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQL 302

Query: 432 QQGFTIVPSEQRFRLLFTFLK----RNQRKKIIVFMSSCNGVKFYAELLNYIDVP----- 482
            Q +  VP   R   L + LK    R   +K++VF S+ + V F+  LL+    P     
Sbjct: 303 VQRYLRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSET 362

Query: 483 -------------VLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIV 529
                           LHG  +Q  R S F  F   + A LL TDVAARGLD P V  I+
Sbjct: 363 EEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCII 422

Query: 530 QYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEY------- 582
           QYD P E  EY+HRVGRTAR +  +G A+LFL P E+ +L+ L+     L EY       
Sbjct: 423 QYDCPGEATEYVHRVGRTAR-IGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLD 481

Query: 583 EFP--------KEKLA--------DIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH-- 624
           +FP        K+ L+         +Q  LE L      ++  A++ F S+++ YA+H  
Sbjct: 482 KFPIPGNMPRIKKVLSLESHPWVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKG 541

Query: 625 SMKDVFNVHELDIAAVAKSFGFSAPPRI 652
            +K +F V +L +  VAKSF     P +
Sbjct: 542 ELKSIFVVKKLHLGHVAKSFALREQPSL 569

gb|EAL27903.1| GA21925-PA [Drosophila pseudoobscura]
(606 aa)

Score: 266 bits (679), Expect: 2.33994e-69
Length: 466, Idn/Pos/Gap = 178/263/31 (38%/56%/6%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
            D   LS+  L  I+  GF  MT +Q  AIPL L+ +D+ A A TGSGKTLAFL+P++E+
Sbjct:   9 LDKPRLSDAVLEVIQSFGFRDMTPVQTAAIPLLLALKDVSAEAVTGSGKTLAFLVPLLEI  68

Query: 272 LYKAK----WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHH---HQTRAIVMGGANRRT 324
           L +      W P+   GA+II+PTRELA QI  VL    +H    H  + +++GG +   
Sbjct:  69 LQRRHRERPWGPKE-IGALIISPTRELARQISEVLAQFLAHEDLEHLNQQLIVGGNSIEE 127

Query: 325 EAEKLINGTN-ILVATPGRLLDHLQS-----TRGFVFEHLRFLVIDEADRCLEIGFEEEM 378
           +   L   T  ILV TPGRL D  Q            + L FLV+DEADR L++GF+  +
Sbjct: 128 DIATLRKETPCILVCTPGRLEDLFQRKGDDLNLAARVKSLEFLVLDEADRLLDLGFKTSV 187

Query: 379 HEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIV 438
           + IL  LP+ R+T LFSATQTT+V DL +   +  P+ + +  +  V T   LQ  + IV
Sbjct: 188 NNILGYLPRQRRTGLFSATQTTEVTDLIRAGLRN-PVLVSVKEKASVNTPARLQNFYRIV 246

Query: 439 PSEQRFRLLFTFLKR--NQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSK 494
             EQ+F  L  FL     +  K++VF  +C  V+++AE L  +     VL +HGK K +K
Sbjct: 247 EPEQKFVALLQFLSSPATRTGKVMVFFPTCACVEYWAEALPPLLPKRSVLGIHGKMK-NK 305

Query: 495 RTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR 554
           R     +F     + LLCTDV ARGLD+P ++W+VQ+DPP     ++HRVGRTAR  +  
Sbjct: 306 RAIVVEKFRNEPESVLLCTDVLARGLDVPEIEWVVQWDPPSNASSFVHRVGRTARQGND- 364

Query: 555 GRAILFLLPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARD- 612
           G A++FLLPSE  ++  L+ + +V LN  E P ++      QL  ++E  + LQ++ +  
Sbjct: 365 GNALVFLLPSEDSYIHFLKINQRVELN--ELPNDEAGPSDPQLPSVLEQLHRLQRADKGV 422

Query: 613 ------GFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
                  F S+++AY  H    +  + +LD+  +A ++G    PR+
Sbjct: 423 YDKGMRAFVSHVRAYTKHECSAILRLKDLDLGKMATAYGLLQLPRM 468

gb|AAH56735.1| Wu:fc62b08 protein [Danio rerio]
(673 aa)

Score: 265 bits (678), Expect: 2.65192e-69
Length: 589, Idn/Pos/Gap = 187/299/97 (31%/50%/16%)

Query: 146 QNAAARTPADEEVASSRA-TVHE--------MEPLARPCPEVTQKSSPALQSLSSEHASE 196
           +N+ A++P+  +    +A T HE           L R  PE+    SPA+  +  +    
Sbjct:  28 ENSEAKSPSKVKTFPKKAPTEHEDHGRPFIKTSSLFRNNPEIPDVLSPAVNQVKEK----  83

Query: 197 QEQPKPSSGLLTPHRFDSLPLSEPTLRGIEE-MGFARMTEIQARAIPLALSGRDILASAR 255
                    + T + F+ L L    +  + + +  + MT +Q + IP+ +SG+D +  ++
Sbjct:  84 ---------VFTSNTFEELNLHPHLVATLHKVLNVSSMTSVQKQTIPVLMSGKDAVVRSQ 134

Query: 256 TGSGKTLAFLIPIVELL--YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-T 312
           TGSGKTLA+ IP+V+ L   + K    +G  A++I PTRELA+Q F +   L        
Sbjct: 135 TGSGKTLAYGIPMVQFLQAIQPKVKRSDGPLAVVIVPTRELALQSFQMFQKLLRPFTWIV 194

Query: 313 RAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEI 372
             ++MGG  ++ E  +L  G N+L++TPGRL+DH+++T    F  +R+L++DEADR L++
Sbjct: 195 PGVLMGGEKKKAEKARLRKGINVLISTPGRLVDHIKNTLSIAFSAVRWLILDEADRILDL 254

Query: 373 GFEEEMHEILRILPKT---RQTMLFSATQTTKVEDLAKVSFQQK-PLHLGIDAEQPV--- 425
           GFE+++  IL  L      RQ +L SAT T  +  LA +S +    +H+   +E+ V   
Sbjct: 255 GFEKDLTVILNALNTAGPDRQNVLLSATITEGLSRLASISMKDPVSVHVSEGSEETVEAC 314

Query: 426 ------------ATVEGLQQGFTIVPSEQRFRLLFTFL----KRNQRKKIIVFMSSCNGV 469
                       A  E LQQ   +VPS+     L  F+    K  QR+K+++F+SSC  V
Sbjct: 315 PQAAPQALSDSYAVPERLQQHVVVVPSKLHLVCLAAFILAKCKFEQRQKLVIFISSCEAV 374

Query: 470 KFYAELLNYI--DVP------------VLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
           +F   L   +  ++P               LHG  +Q +RT  F EF++ +   LLCTDV
Sbjct: 375 EFLLNLFTAVLCEIPSNTSSKSTSCLNFYRLHGNMRQEERTEVFQEFSQCKTGILLCTDV 434

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDA 575
           AARGLD+P V WIVQY+PP    EY+HRVGRTAR +  +G ++LFL PSE  F+  L + 
Sbjct: 435 AARGLDLPQVTWIVQYNPPVSAAEYVHRVGRTAR-IGAQGSSLLFLTPSETAFVDVLANH 493

Query: 576 KVPLNEYEF-------------------------------PKEKLADIQTQLEKLVEGNY 604
            + L+E +                                 +E+   +QT  E  V  + 
Sbjct: 494 NISLSEMKMVDILSTLMKDERFKGRGKWDSKRSADAFEQEVRERATLLQTDFENYVHASN 553

Query: 605 YLQKSARDGFRSYLQAYASH--SMKDVFNVHELDIAAVAKSFGFSAPPR 651
              ++A+   + +L+AY ++  S+K +F++  L +   AKSFG    P+
Sbjct: 554 ESLQTAKSALQCFLRAYTTYPSSLKHIFHIRMLHLGHAAKSFGLRDAPQ 602

ref|XP_242296.3| PREDICTED: similar to Ddx31 protein [Rattus norvegicus]
(682 aa)

Score: 265 bits (677), Expect: 3.73362e-69
Length: 558, Idn/Pos/Gap = 193/291/87 (34%/52%/15%)

Query: 173 RPCPEVTQ--KSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEE-MG 229
           +PC + +   K++P +  L   H +  +Q +    + +P  F  L L    +  I   + 
Sbjct:  69 KPCVKTSSLFKNNPEIPEL---HRTVVKQAREQ--VFSPEAFQELDLHPHLISTINTVLK 123

Query: 230 FARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAKWMPRNGTGAII 287
            + MT +Q ++IP+ L GRD L  ++TGSGKTLA+ IP+V+ L    +K    +G  A++
Sbjct: 124 MSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALV 183

Query: 288 IAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDH 346
           + PTRELA+Q F  +  L          ++MGG  R++E  +L  G NIL++TPGRL+DH
Sbjct: 184 LVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDH 243

Query: 347 LQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTMLFSATQTTKVE 403
           ++ST+   F  +R+LV+DEADR L++GFE+++  IL  +    + RQ +L SAT T  V 
Sbjct: 244 IKSTKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVLLSATLTEGVT 303

Query: 404 DLAKVSFQQKPLHLGI---DAEQP----VATV--------EGLQQGFTIVPSEQRFRLLF 448
            LA +S    P+ + +     +QP    VA++        E L Q   +VPS+ R   L 
Sbjct: 304 RLADISLHN-PVSISVLDKSWDQPNPKEVASIQLDSFAIPESLDQYVVLVPSKLRLVCLA 362

Query: 449 TFL----KRNQRKKIIVFMSSCNGVKFY----------------AELLNYIDVPV--LDL 486
            F+    K  + +K+IVF SSC  V+F+                +E L     P+  L L
Sbjct: 363 AFILKKCKFEKDQKMIVFFSSCELVEFHYNLFLHTLLCHSGTPASETLPSASWPLKFLRL 422

Query: 487 HGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGR 546
           HG  KQ +RTS F EF+      LLCTDVA+RGLD+P V WIVQY  P  P EYIHR+GR
Sbjct: 423 HGNMKQEERTSVFHEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSAPAEYIHRIGR 482

Query: 547 TAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP-------------------- 585
           TAR G H  G ++L L PSE  ++  L   K+ ++E +                      
Sbjct: 483 TARIGCH--GSSLLILAPSEAEYVNSLASHKINVSEIKLEGILAVLAKDDCFKRRQRGAQ 540

Query: 586 ----------KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH--SMKDVFNVH 633
                     +E+   +QT  E  V  +  +   A+   +S+++AYA++   +K +F+V 
Sbjct: 541 RSHATGPQEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVR 600

Query: 634 ELDIAAVAKSFGFSAPPR 651
            L +  VAKSFG    PR
Sbjct: 601 SLHLGHVAKSFGLRDAPR 618

gb|AAH84638.1| LOC495225 protein [Xenopus laevis]
(554 aa)

Score: 264 bits (674), Expect: 8.96628e-69
Length: 539, Idn/Pos/Gap = 185/275/76 (34%/51%/14%)

Query: 228 MGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAKWMPRNGTGA 285
           M    MT +Q   IP  L+GRD+L  ++TGSGKT+A+ +P+V+ L     K    +G  A
Sbjct:   1 MNMPNMTSVQKLTIPALLAGRDVLVRSQTGSGKTMAYGVPLVQALQGVTPKIQRSDGPYA  60

Query: 286 IIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNILVATPGRLL 344
           +++ PTRELA+Q F  +  L          ++MGG  R++E  +L  G NIL++TPGRLL
Sbjct:  61 LVLVPTRELALQSFNTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLL 120

Query: 345 DHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTMLFSATQTTK 401
           DH++ST+   F   R+L++DEADR L++GFE+++  IL  L    + RQ +L SAT +  
Sbjct: 121 DHIKSTKSIHFTRARWLIVDEADRILDMGFEKDVTAILNALNSQCQHRQNVLLSATLSPG 180

Query: 402 VEDLAKVSFQQKPLHLGI-------------------DAEQPV-ATVEGLQQGFTIVPSE 441
           V  LA +S    P ++ I                   D+E    A  E L Q   + PS+
Sbjct: 181 VTRLADISLND-PFNVTIAEDNSREAKHGGKAKEDKKDSESSCFAMPEKLHQHAVVAPSK 239

Query: 442 QRFRLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELLNYI---------DVPVLDLHG 488
            +   L TF+    K  ++ K+IVF  SC  V+FY  LL+ +             L LHG
Sbjct: 240 LKLVTLATFILGKWKCERKAKMIVFFPSCELVEFYHTLLSKVLTVGDSAMGSDDFLRLHG 299

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTA 548
             +Q +RT  F +F   +   LLCTDVAARGLD+P V WIVQY  P    EYIHRVGRTA
Sbjct: 300 NMEQEERTEVFQQFTNCQAGILLCTDVAARGLDLPQVTWIVQYGAPASAAEYIHRVGRTA 359

Query: 549 RGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP----------------------- 585
           R +  +G ++L L+PSE  +LQ L + K+ ++E +                         
Sbjct: 360 R-LGAQGSSLLILIPSEAAYLQTLAEHKISVSEMKMEDILSNLLMEDFLKIKRAGGKKSD 418

Query: 586 -------KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH--SMKDVFNVHELD 636
                  +E+   +QT+ E  V  +      A+   +SY+++YA++  ++K +F++  L 
Sbjct: 419 VADPQTVRERATVLQTKFEDYVHASADTALWAKKALQSYIRSYATYPKNLKHIFHIRSLH 478

Query: 637 IAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWKNRDR--LKDLIRKRLASG 693
           +  VAKSFG    P      L  +   ++  G     D  K R +    DL+R   ASG
Sbjct: 479 LGHVAKSFGLRDAPHNLSRQLSGSLN-KQSKGKQKRADTNKRRPKQSFSDLLRSEYASG 536

dbj|BAB15620.1| unnamed protein product [Homo sapiens]
(674 aa)

Score: 262 bits (669), Expect: 2.90768e-68
Length: 520, Idn/Pos/Gap = 181/266/89 (34%/51%/17%)

Query: 228 MGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAKWMPRNGTGA 285
           +  + MT +Q ++IP+ L GRD L  ++TGSGKTLA+ IP+V+ L   ++K    +G  A
Sbjct:  72 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 131

Query: 286 IIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNILVATPGRLL 344
           +++ PTRELA+Q F  +  L          ++MGG  R++E  +L  G NIL++TPGRL+
Sbjct: 132 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 191

Query: 345 DHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTMLFSATQTTK 401
           DH++ST+   F  LR+LV DEADR L++GFE+++  I   +    + RQ +L SAT T  
Sbjct: 192 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVIPNAVNAECQKRQNVLLSATLTEG 251

Query: 402 VEDLAKVSFQQKPLHLGI------------------------DAEQPVATVEGLQQGFTI 437
           V  LA +S    P+ + +                        D     A  E L+Q  T+
Sbjct: 252 VTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTV 310

Query: 438 VPSEQRFRLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELL----------------- 476
           VPS+ R   L  F+    K  + +K++VF SSC  V+F+  L                  
Sbjct: 311 VPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHCSLFLQTLLSSSGAPASGQLP 370

Query: 477 -NYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPD 535
              + +  L LHG  +Q +RT+ F EF+      LLCTDVAARGLD+P V WIVQY+ P 
Sbjct: 371 SASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPS 430

Query: 536 EPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP--------- 585
            P EYIHR+GRTAR G H  G ++L L PSE  ++  L   K+ ++E +           
Sbjct: 431 SPAEYIHRIGRTARIGCH--GSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRD 488

Query: 586 ---------------------KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH 624
                                +E+   +QT  E  V  +      A+   +S++QAYA++
Sbjct: 489 DCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATY 548

Query: 625 --SMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKK 662
              +K +F+V  L +  VAKSFG    PR  L  L R K+
Sbjct: 549 PRELKHIFHVRSLHLGHVAKSFGLRDAPR-NLSALTRKKR 587

gb|EAL61778.1| hypothetical protein DDB0183998 [Dictyostelium discoideum]
(663 aa)

Score: 261 bits (666), Expect: 6.21295e-68
Length: 500, Idn/Pos/Gap = 174/265/71 (34%/53%/14%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLYKA 275
           LS+ TL  I  +GF  M+ +Q+  IPL +S +D+L  A TGSGKTLAF+IPI+E +L + 
Sbjct:  17 LSDSTLNTINRLGFKSMSPVQSAVIPLFMSNKDVLVEACTGSGKTLAFVIPIIEKILKRE  76

Query: 276 KWMPRNGTGAIIIAPTRELAMQIFGVL----HDLASHHHQ-------------------- 311
             + +    +III+PTRELA+QI  VL    +DL     Q                    
Sbjct:  77 TNLKKTDIASIIISPTRELAIQIQQVLLEFLNDLNRIDDQNDLENIKTLEDELLEEQEEE 136

Query: 312 --------------------TRAIVMGGANRRTEAEKLIN-GTNILVATPGRLLDHL--- 347
                               +  +++GG +   +     N G NIL+ TPGR  + L   
Sbjct: 137 ENEKEEEEIEKKKKKKKIEISSLLLIGGTDIYQDLVNYKNYGGNILIGTPGRTDEFLTRV 196

Query: 348 -QSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLA 406
            ++ + F F+    L++DEADR L++GF   ++ IL  LPK R+T LFSATQT++V++LA
Sbjct: 197 VRNDQQFKFKEFEMLILDEADRLLDMGFHLPINSILLKLPKQRRTGLFSATQTSEVKELA 256

Query: 407 --------KVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRN-QRK 457
                   KVS   K  H+    +Q + T   L   + IVP E+R   L  FL  +  + 
Sbjct: 257 RTGMRNPFKVSVSVK--HIETHEDQSIPTT--LDNRYMIVPVEERLNQLVHFLLNHIDKN 312

Query: 458 KIIVFMSSCNGVKFYAELLNYIDV----PVLDLHGKQKQSKRTSTFFEFARREHATLLCT 513
           KII++  +C+ V ++ ++L  + V    P   LHGK   S+R   F  F++  +  LL T
Sbjct: 313 KIIIYFLTCSTVDYFFKILQSVKVLSGKPFFSLHGKAPHSQRIKVFDSFSQATNGCLLST 372

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL 572
           D+AARGLDIP VDW++QYD P +PK ++HR+GRTAR   GR G A++FL P E  +++ L
Sbjct: 373 DLAARGLDIPNVDWVLQYDSPQDPKAFVHRIGRTAR--MGRDGNALIFLSPEEDSYIEFL 430

Query: 573 RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNV 632
           +  KVPL E     E + ++  +++K+   +  + +       S+++ Y  H    +F  
Sbjct: 431 KIKKVPLVEM-VKAENVTNVLPEIKKISFNDREIMEKGVIAMVSHVRGYKEHLCPYIFVF 489

Query: 633 HELDIAAVAKSFGFSAPPRI 652
           H L+I  +A  FG    PR+
Sbjct: 490 HRLNIGLLATGFGLLYLPRM 509

ref|XP_534885.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 [Canis familiaris]
(470 aa)

Score: 261 bits (666), Expect: 7.10029e-68
Length: 425, Idn/Pos/Gap = 160/245/18 (37%/57%/4%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDIL 251
           EH S  E+P+P+        F  L +++      +++G+ + T+IQ  AIPLAL GRDI+
Sbjct:  20 EHDSPAEEPQPAVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDII  79

Query: 252 ASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ 311
             A TGSGKT AF +PI+  L +    P+    A+++ PTRELA QI      L S    
Sbjct:  80 GLAETGSGKTGAFALPILNALLET---PQR-LFALVLTPTRELAFQISEQFEALGSSIGV 135

Query: 312 TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLE 371
             A+++GG +  +++  L    +I++ATPGRL+DHL++T+GF    L++LV+DEADR L 
Sbjct: 136 QSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 195

Query: 372 IGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGL 431
           + FE E+ +IL+++P+ R+T LFSAT T KV+ L + + +  P+   + ++    TVE L
Sbjct: 196 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKN-PVKCAVSSK--YQTVEKL 252

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQK 491
           QQ +  +PS+ +   L   L        ++F S+CN  +  A LL  +    + LHG+  
Sbjct: 253 QQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMS 312

Query: 492 QSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGV 551
           QSKR  +  +F  +  + LL TDVA+RGLDIP VD +V +D P   K+YIHRVGRTAR  
Sbjct: 313 QSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARA- 371

Query: 552 HGR-GRAILFLLPSEVGFLQ---HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQ 607
            GR G+AI F+   +V   Q   HL   K+P+    FP +   ++    E++ E   + +
Sbjct: 372 -GRSGKAITFVTQYDVELFQRIEHLIGKKLPV----FPTQD-DEVMMLTERVTEAQRFAR 425

Query: 608 KSARD 612
              R+
Sbjct: 426 MELRE 430

gb|AAH12726.2| DDX31 protein [Homo sapiens]
(777 aa)

Score: 259 bits (662), Expect: 2.22698e-67
Length: 589, Idn/Pos/Gap = 193/289/113 (32%/49%/19%)

Query: 183 SPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGF------------ 230
           SP   S+S+   +++E+    +  L  +  D   L  P ++ ++E  F            
Sbjct: 106 SPKKHSVSTSDRNQEERQCIKTSSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHELGLHP 165

Query: 231 ------------ARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAK 276
                       + MT +Q ++IP+ L GRD L  ++TGSGKTLA+ IP+V+ L   ++K
Sbjct: 166 HLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESK 225

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNI 335
               +G  A+++ PTRELA+Q F  +  L          ++MGG  R++E  +L  G NI
Sbjct: 226 IQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINI 285

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTM 392
           L++TPGRL+DH++ST+   F  LR+LV DEADR L++GFE+++  IL  +    + RQ +
Sbjct: 286 LISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNV 345

Query: 393 LFSATQTTKVEDLAKVSFQQKPLHLGI------------------------DAEQPVATV 428
           L SAT T  V  LA +S    P+ + +                        D     A  
Sbjct: 346 LLSATLTEGVTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIP 404

Query: 429 EGLQQGFTIVPSEQRFRLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELL-------- 476
           E L+Q  T+VPS+ R   L  F+    K  + +K++VF SSC  V+F+  L         
Sbjct: 405 ESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLLSSS 464

Query: 477 ----------NYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVD 526
                       + +  L LHG  +Q +RT+ F EF+      LLCTDVAARGLD+P V 
Sbjct: 465 GAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVT 524

Query: 527 WIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP 585
           WIVQY+ P  P EYIHR+GRTAR G H  G ++L L PSE  ++  L   K+ ++E +  
Sbjct: 525 WIVQYNAPSSPAEYIHRIGRTARIGCH--GSSLLILAPSEAEYVNSLASHKINVSEIKME 582

Query: 586 ------------------------------KEKLADIQTQLEKLVEGNYYLQKSARDGFR 615
                                         +E+   +QT  E  V  +      A+   +
Sbjct: 583 DILCVLTRDDCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQ 642

Query: 616 SYLQAYASH--SMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKK 662
           S++QAYA++   +K +F+V  L +  VAKSFG    PR  L  L R K+
Sbjct: 643 SFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPR-NLSALTRKKR 690

gb|AAQ14889.1| helicain B [Homo sapiens]
(851 aa)

Score: 259 bits (661), Expect: 2.69811e-67
Length: 589, Idn/Pos/Gap = 193/289/113 (32%/49%/19%)

Query: 183 SPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGF------------ 230
           SP   S+S+   +++E+    +  L  +  D   L  P ++ ++E  F            
Sbjct: 180 SPKKHSVSTSDRNQEERQCIKTSSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHELGLHP 239

Query: 231 ------------ARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAK 276
                       + MT +Q ++IP+ L GRD L  ++TGSGKTLA+ IP+V+ L   ++K
Sbjct: 240 HLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESK 299

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNI 335
               +G  A+++ PTRELA+Q F  +  L          ++MGG  R++E  +L  G NI
Sbjct: 300 IQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINI 359

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTM 392
           L++TPGRL+DH++ST+   F  LR+LV DEADR L++GFE+++  IL  +    + RQ +
Sbjct: 360 LISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNV 419

Query: 393 LFSATQTTKVEDLAKVSFQQKPLHLGI------------------------DAEQPVATV 428
           L SAT T  V  LA +S    P+ + +                        D     A  
Sbjct: 420 LLSATLTEGVTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIP 478

Query: 429 EGLQQGFTIVPSEQRFRLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELL-------- 476
           E L+Q  T+VPS+ R   L  F+    K  + +K++VF SSC  V+F+  L         
Sbjct: 479 ESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLLSSS 538

Query: 477 ----------NYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVD 526
                       + +  L LHG  +Q +RT+ F EF+      LLCTDVAARGLD+P V 
Sbjct: 539 GAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVT 598

Query: 527 WIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP 585
           WIVQY+ P  P EYIHR+GRTAR G H  G ++L L PSE  ++  L   K+ ++E +  
Sbjct: 599 WIVQYNAPSSPAEYIHRIGRTARIGCH--GSSLLILAPSEAEYVNSLASHKINVSEIKME 656

Query: 586 ------------------------------KEKLADIQTQLEKLVEGNYYLQKSARDGFR 615
                                         +E+   +QT  E  V  +      A+   +
Sbjct: 657 DILCVLTRDDCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQ 716

Query: 616 SYLQAYASH--SMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKK 662
           S++QAYA++   +K +F+V  L +  VAKSFG    PR  L  L R K+
Sbjct: 717 SFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPR-NLSALTRKKR 764

emb|CAI16564.1| OTTHUMP00000064614 [Homo sapiens]
emb|CAH70531.1| OTTHUMP00000064614 [Homo sapiens]
gb|AAL26549.1| DEAD/DEXH helicase DDX31 [Homo sapiens]
ref|NP_073616.6| DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 [Homo sapiens]
(851 aa)

Score: 259 bits (661), Expect: 2.93289e-67
Length: 589, Idn/Pos/Gap = 193/289/113 (32%/49%/19%)

Query: 183 SPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGF------------ 230
           SP   S+S+   +++E+    +  L  +  D   L  P ++ ++E  F            
Sbjct: 180 SPKKHSVSTSDRNQEERQCIKTSSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHELGLHP 239

Query: 231 ------------ARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAK 276
                       + MT +Q ++IP+ L GRD L  ++TGSGKTLA+ IP+V+ L   ++K
Sbjct: 240 HLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESK 299

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNI 335
               +G  A+++ PTRELA+Q F  +  L          ++MGG  R++E  +L  G NI
Sbjct: 300 IQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINI 359

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTM 392
           L++TPGRL+DH++ST+   F  LR+LV DEADR L++GFE+++  IL  +    + RQ +
Sbjct: 360 LISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNV 419

Query: 393 LFSATQTTKVEDLAKVSFQQKPLHLGI------------------------DAEQPVATV 428
           L SAT T  V  LA +S    P+ + +                        D     A  
Sbjct: 420 LLSATLTEGVTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIP 478

Query: 429 EGLQQGFTIVPSEQRFRLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELL-------- 476
           E L+Q  T+VPS+ R   L  F+    K  + +K++VF SSC  V+F+  L         
Sbjct: 479 ESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLLSSS 538

Query: 477 ----------NYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVD 526
                       + +  L LHG  +Q +RT+ F EF+      LLCTDVAARGLD+P V 
Sbjct: 539 GAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVT 598

Query: 527 WIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP 585
           WIVQY+ P  P EYIHR+GRTAR G H  G ++L L PSE  ++  L   K+ ++E +  
Sbjct: 599 WIVQYNAPSSPAEYIHRIGRTARIGCH--GSSLLILAPSEAEYVNSLASHKINVSEIKME 656

Query: 586 ------------------------------KEKLADIQTQLEKLVEGNYYLQKSARDGFR 615
                                         +E+   +QT  E  V  +      A+   +
Sbjct: 657 DILCVLTRDDCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQ 716

Query: 616 SYLQAYASH--SMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKK 662
           S++QAYA++   +K +F+V  L +  VAKSFG    PR  L  L R K+
Sbjct: 717 SFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPR-NLSALTRKKR 764

emb|CAC14786.1| DEAD box protein [Homo sapiens]
(455 aa)

Score: 257 bits (656), Expect: 9.19888e-67
Length: 425, Idn/Pos/Gap = 160/242/18 (37%/56%/4%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDIL 251
           EH S  E  +P         F  L +++      +++G+ + T+IQ  AIPLAL GRDI+
Sbjct:   6 EHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDII  65

Query: 252 ASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ 311
             A TGSGKT AF +PI+  L +    P+    A+++ PTRELA QI      L S    
Sbjct:  66 GLAETGSGKTGAFALPILNALLET---PQR-LFALVLTPTRELAFQISEQFEALGSSIGV 121

Query: 312 TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLE 371
             A+++GG +  +++  L    +I++ATPGRL+DHL++T+GF    L++LV+DEADR L 
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181

Query: 372 IGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGL 431
           + FE E+ +IL+++P+ R+T LFSAT T KV+ L + + +  P+   + ++    TVE L
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKN-PVKCAVSSK--YQTVEKL 238

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQK 491
           QQ +  +PS+ +   L   L        ++F S+CN  +  A LL  +    + LHG+  
Sbjct: 239 QQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMS 298

Query: 492 QSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGV 551
           QSKR  +  +F  +E + LL TDVA+RGLDIP VD +V +D P   K+YIHRVGRTAR  
Sbjct: 299 QSKRLGSLNKFKAKESSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARA- 357

Query: 552 HGR-GRAILFLLPSEVGFLQ---HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQ 607
            GR G+AI F+   +V   Q   HL   K+P     FP +   ++    E++ E   + +
Sbjct: 358 -GRSGKAITFVTQYDVELFQRIEHLIGKKLP----GFPTQD-DEVMMLTERVAEAQRFAR 411

Query: 608 KSARD 612
              R+
Sbjct: 412 MELRE 416

ref|NP_080636.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
sp|Q9CWX9|DDX47_MOUSE DEAD-box protein 47
dbj|BAC36547.1| unnamed protein product [Mus musculus]
dbj|BAB26843.2| unnamed protein product [Mus musculus]
(455 aa)

Score: 255 bits (652), Expect: 2.98311e-66
Length: 429, Idn/Pos/Gap = 161/246/24 (37%/57%/5%)

Query: 194 ASEQEQPKPSSGLLTPHR------FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSG 247
           A+++E   PS  L T         F  L +++      +++G+A+ T+IQ  AIPLAL G
Sbjct:   2 AADEEPDSPSGALQTAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQG  61

Query: 248 RDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLAS 307
           RDI+  A TGSGKT AF +PI+  L +    P+    A+++ PTRELA QI      L S
Sbjct:  62 RDIIGLAETGSGKTGAFALPILNALLET---PQR-LFALVLTPTRELAFQISEQFEALGS 117

Query: 308 HHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEAD 367
                 A+++GG +  +++  L    +I++ATPGRL+DHL++T+GF    L++LV+DEAD
Sbjct: 118 SIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 177

Query: 368 RCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVAT 427
           R L + FE E+ +IL+++P+ R+T LFSAT T KV+ L + + +  P+   + ++    T
Sbjct: 178 RILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKN-PVKCAVSSK--YQT 234

Query: 428 VEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLH 487
           VE LQQ +  +PS+ +   L   L        ++F S+CN  +  A LL  +    + LH
Sbjct: 235 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294

Query: 488 GKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRT 547
           G+  QSKR  +  +F  +  + LL TDVA+RGLDIP VD +V +D P   K+YIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354

Query: 548 ARGVHGR-GRAILFLLPSEVGFLQ---HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGN 603
           AR   GR G+AI F+   +V   Q   HL   K+P+    FP +   ++    E++ E  
Sbjct: 355 ARA--GRSGKAITFVTQYDVELFQRIEHLIGKKLPV----FPTQD-EEVMMLTERVNEAQ 407

Query: 604 YYLQKSARD 612
            + +   R+
Sbjct: 408 RFARMELRE 416

gb|AAH09379.2| DDX47 protein [Homo sapiens]
(450 aa)

Score: 255 bits (652), Expect: 3.08435e-66
Length: 425, Idn/Pos/Gap = 159/241/18 (37%/56%/4%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDIL 251
           EH S  E  +P         F  L +++      +++G+ + T+IQ  AIPLAL GRDI+
Sbjct:   1 EHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDII  60

Query: 252 ASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ 311
             A TGSGKT AF +PI+  L +    P+    A+++ PTRELA QI      L S    
Sbjct:  61 GLAETGSGKTGAFALPILNALLET---PQR-LFALVLTPTRELAFQISEQFEALGSSIGV 116

Query: 312 TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLE 371
             A+++GG +  +++  L    +I++ATPGRL+DHL++T+GF    L++LV+DEADR L 
Sbjct: 117 QSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 176

Query: 372 IGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGL 431
           + FE E+ +IL+++P+ R+T LFSAT T KV+ L + + +  P+   + ++    TVE L
Sbjct: 177 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKN-PVKCAVSSK--YQTVEKL 233

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQK 491
           QQ +  +PS+ +   L   L        ++F S+CN  +  A LL  +    + LHG+  
Sbjct: 234 QQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMS 293

Query: 492 QSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGV 551
           QSKR  +  +F  +  + LL TDVA+RGLDIP VD +V +D P   K+YIHRVGRTAR  
Sbjct: 294 QSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARA- 352

Query: 552 HGR-GRAILFLLPSEVGFLQ---HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQ 607
            GR G+AI F+   +V   Q   HL   K+P     FP +   ++    E++ E   + +
Sbjct: 353 -GRSGKAITFVTQYDVELFQRIEHLIGKKLP----GFPTQD-DEVMMLTERVAEAQRFAR 406

Query: 608 KSARD 612
              R+
Sbjct: 407 MELRE 411

gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
(448 aa)

Score: 255 bits (651), Expect: 4.165e-66
Length: 399, Idn/Pos/Gap = 153/234/17 (38%/58%/4%)

Query: 194 ASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILAS 253
           +SE+E     +G   P  F  L +++      E++G+ + T+IQ  AIP+AL GRDI+  
Sbjct:   3 SSEEEHDVVENGEEEPKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQGRDIIGL  62

Query: 254 ARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTR 313
           A TGSGKT AF +PI++ L ++   P+    A+++ PTRELA QI      L S      
Sbjct:  63 AETGSGKTGAFALPILQTLLES---PQR-LYALVLTPTRELAFQISEQFEALGSSIGVKS 118

Query: 314 AIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG 373
           A+++GG +  +++  L    +I++ATPGRL+DHL++T+GF    +++LV+DEADR L + 
Sbjct: 119 AVIVGGIDMMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRAIKYLVMDEADRILNMD 178

Query: 374 FEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQ 433
           FE E+ +IL+++P+ R+T LFSAT T KV  L + + +  P+   + ++    TVE LQQ
Sbjct: 179 FETEVDKILKVIPRDRKTFLFSATMTKKVHKLQRAALKD-PVKCAVSSK--YQTVEKLQQ 235

Query: 434 GFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQS 493
            +  +PS+ +   L   L        ++F S+CN  +  A LL  +    + LHG+  Q+
Sbjct: 236 FYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMGQN 295

Query: 494 KRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHG 553
           KR     +F  +  + LL TDVA+RGLDIP VD ++ +D P   K+YIHRVGRTAR   G
Sbjct: 296 KRLGALNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARA--G 353

Query: 554 R-GRAILFLLPSEVGFLQ---HLRDAKVPLNEYEFPKEK 588
           R G+AI F+   +V   Q   HL   K+P     FP ++
Sbjct: 354 RSGKAITFVSQYDVELFQRIEHLIGKKLP----AFPTQE 388

emb|CAB66601.1| hypothetical protein [Homo sapiens]
gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform 1 [Homo sapiens]
sp|Q9H0S4|DDX47_HUMAN DEAD-box protein 47
ref|NP_057439.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 [Homo sapiens]
(455 aa)

Score: 254 bits (650), Expect: 4.96262e-66
Length: 425, Idn/Pos/Gap = 159/241/18 (37%/56%/4%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDIL 251
           EH S  E  +P         F  L +++      +++G+ + T+IQ  AIPLAL GRDI+
Sbjct:   6 EHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDII  65

Query: 252 ASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ 311
             A TGSGKT AF +PI+  L +    P+    A+++ PTRELA QI      L S    
Sbjct:  66 GLAETGSGKTGAFALPILNALLET---PQR-LFALVLTPTRELAFQISEQFEALGSSIGV 121

Query: 312 TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLE 371
             A+++GG +  +++  L    +I++ATPGRL+DHL++T+GF    L++LV+DEADR L 
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181

Query: 372 IGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGL 431
           + FE E+ +IL+++P+ R+T LFSAT T KV+ L + + +  P+   + ++    TVE L
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKN-PVKCAVSSK--YQTVEKL 238

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQK 491
           QQ +  +PS+ +   L   L        ++F S+CN  +  A LL  +    + LHG+  
Sbjct: 239 QQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMS 298

Query: 492 QSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGV 551
           QSKR  +  +F  +  + LL TDVA+RGLDIP VD +V +D P   K+YIHRVGRTAR  
Sbjct: 299 QSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARA- 357

Query: 552 HGR-GRAILFLLPSEVGFLQ---HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQ 607
            GR G+AI F+   +V   Q   HL   K+P     FP +   ++    E++ E   + +
Sbjct: 358 -GRSGKAITFVTQYDVELFQRIEHLIGKKLP----GFPTQD-DEVMMLTERVAEAQRFAR 411

Query: 608 KSARD 612
              R+
Sbjct: 412 MELRE 416

dbj|BAB70762.1| unnamed protein product [Homo sapiens]
(455 aa)

Score: 254 bits (649), Expect: 7.40706e-66
Length: 425, Idn/Pos/Gap = 158/241/18 (37%/56%/4%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDIL 251
           EH S  E  +P         F  L +++      +++G+ + T+IQ  A+PLAL GRDI+
Sbjct:   6 EHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAVPLALQGRDII  65

Query: 252 ASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ 311
             A TGSGKT AF +PI+  L +    P+    A+++ PTRELA QI      L S    
Sbjct:  66 GLAETGSGKTGAFALPILNALLET---PQR-LFALVLTPTRELAFQISEQFEALGSSIGV 121

Query: 312 TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLE 371
             A+++GG +  +++  L    +I++ATPGRL+DHL++T+GF    L++LV+DEADR L 
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181

Query: 372 IGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGL 431
           + FE E+ +IL+++P+ R+T LFSAT T KV+ L + + +  P+   + ++    TVE L
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKN-PVKCAVSSK--YQTVEKL 238

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQK 491
           QQ +  +PS+ +   L   L        ++F S+CN  +  A LL  +    + LHG+  
Sbjct: 239 QQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMS 298

Query: 492 QSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGV 551
           QSKR  +  +F  +  + LL TDVA+RGLDIP VD +V +D P   K+YIHRVGRTAR  
Sbjct: 299 QSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARA- 357

Query: 552 HGR-GRAILFLLPSEVGFLQ---HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQ 607
            GR G+AI F+   +V   Q   HL   K+P     FP +   ++    E++ E   + +
Sbjct: 358 -GRSGKAITFVTQYDVELFQRIEHLIGKKLP----GFPTQD-DEVMMLTERVAEAQRFAR 411

Query: 608 KSARD 612
              R+
Sbjct: 412 MELRE 416

dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo sapiens]
(448 aa)

Score: 250 bits (639), Expect: 1.04314e-64
Length: 405, Idn/Pos/Gap = 154/234/18 (38%/57%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L +++      +++G+ + T+IQ  AIPLAL GRDI+  A TGSGKT AF +PI+  
Sbjct:  19 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA  78

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +    P+    A+++ PTRELA QI      L S      A+++GG +  +++  L  
Sbjct:  79 LLET---PQR-LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAK 134

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I++ATPGRL+DHL++T+GF    L++LV+DEADR L + FE E+ +IL++ P+ R+T
Sbjct: 135 KPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVNPRDRKT 194

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT T KV+ L + + +  P+   + ++    TVE LQQ +  +PS+ +   L   L
Sbjct: 195 FLFSATMTKKVQKLQRAALKN-PVKCAVSSK--YQTVEKLQQYYIFIPSKFKDTYLVYIL 251

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                   ++F S+CN  +  A LL  +    + LHG+  QSKR  +  +F  +  + LL
Sbjct: 252 NELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILL 311

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQ 570
            TDVA+RGLDIP VD +V +D P   K+YIHRVGRTAR   GR G+AI F+   +V   Q
Sbjct: 312 ATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARA--GRSGKAITFVTQYDVELFQ 369

Query: 571 ---HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARD 612
              HL   K+P     FP +   ++    E++ E   + +   R+
Sbjct: 370 RIEHLIGKKLP----GFPTQD-DEVMMLTERVAEAQRFARMELRE 409

ref|NP_001007854.1| similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1; E4-DEAD box protein [Gallus gallus]
emb|CAG31483.1| hypothetical protein [Gallus gallus]
(453 aa)

Score: 249 bits (637), Expect: 1.85512e-64
Length: 405, Idn/Pos/Gap = 151/236/18 (37%/58%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L +++      +++G+   T+IQ  AIP+AL GRDI+  A TGSGKT AF +PI++ 
Sbjct:  27 FKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFALPILQA  86

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L  A   P+    A+++ PTRELA QI      L S      A+++GG +  +++  L  
Sbjct:  87 LLDA---PQR-LFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAK 142

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I++ATPGRL+DHL++T+GF    L+FLV+DEADR L + FE E+ +IL+++P+ R+T
Sbjct: 143 KPHIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRKT 202

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT T +V+ L + + +  P+   + ++    TVE LQQ +  +PS+ +   L   L
Sbjct: 203 FLFSATMTKQVQKLQRAALKN-PVKCAVSSK--YQTVEKLQQYYIFIPSKFKDSYLVYIL 259

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                   ++F S+CN  +  A LL  +    + LHG+  Q+KR  +  +F  +  + LL
Sbjct: 260 NELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSILL 319

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQ 570
            TDVA+RGLDIP VD ++ +D P   K+YIHRVGRTAR   GR G++I F+   +V   Q
Sbjct: 320 ATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARA--GRSGKSITFVTQYDVELFQ 377

Query: 571 ---HLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARD 612
              HL   K+P     FP ++  ++    E++ E   + +   R+
Sbjct: 378 RIEHLIGKKLP----AFPMQE-EEVMMLTERVAEAQRFARMELRE 417

gb|EAL00509.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
(613 aa)

Score: 247 bits (631), Expect: 8.26048e-64
Length: 363, Idn/Pos/Gap = 153/226/12 (42%/62%/3%)

Query: 203 SSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTL 262
           SS   T   F +L LS P L+GI E+ F + T IQ+ +IP+AL G+DI+A A+TGSGKT 
Sbjct: 123 SSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTG 182

Query: 263 AFLIPIVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH-HHQTRAIVMGGA 320
           A++IPI+E LLYK    P   T  II+ PTRELA+Q++     L+ H ++    + +GG 
Sbjct: 183 AYMIPIIERLLYK----PSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGL 238

Query: 321 NRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHE 380
           N R + E+L    +I++ATPGRL+DH++++  F  + ++ LVIDEADR LE GF++E+ E
Sbjct: 239 NLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTE 298

Query: 381 ILRILPK-TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVP 439
           IL ++PK  RQT+LFSAT  T+++DL ++S  QKP+ + ID  + VA+ + LQQ   I  
Sbjct: 299 ILSLIPKHKRQTLLFSATMNTRIQDLIQLSL-QKPVRIMIDPPKSVAS-KLLQQFVRIRK 356

Query: 440 SEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTF 499
            +Q    L   L +    +++VF++          +L  + + V +LHG   Q +R    
Sbjct: 357 RDQLKPALLYQLLKGVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNV 416

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAI 558
             F   E   L+CTD+AARGLDIP ++ ++ YD P   + Y+HRVGRTAR   GR G +I
Sbjct: 417 KNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGRTARA--GRDGTSI 474

Query: 559 LFL 561
            F+
Sbjct: 475 TFV 477

emb|CAD25888.1| ATP-DEPENDENT RNA HELICASE (DEAD box family) [Encephalitozoon cuniculi GB-M1]
ref|NP_586284.1| ATP-DEPENDENT RNA HELICASE (DEAD box family) [Encephalitozoon cuniculi GB-M1]
(452 aa)

Score: 247 bits (630), Expect: 9.44025e-64
Length: 455, Idn/Pos/Gap = 155/244/22 (34%/53%/4%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           + P +F+ L + +   +G+ E GF  M E+Q + IP+AL G DI+ S++TG+GKTLAFL+
Sbjct:   1 MRPMKFEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLV  60

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           P ++ L    W   +G G ++I PTRELA+QIF VL  +A +   +  ++MGG     E 
Sbjct:  61 PTLQRLVSLGWGGGDGLGCLVITPTRELALQIFDVLSRIAKYTVLSTGLIMGGLEAEDEL 120

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            K +N  NILV TPGRLL HLQ        +++ L++DEAD+ +E+GF+E + +IL  +P
Sbjct: 121 LK-VNQMNILVCTPGRLLQHLQENPYLSTANVQILILDEADKMIEMGFKEVLEDILEYIP 179

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           + +QT+LFSAT       + K+   + P  + I  E+   +   L+Q F ++ +  +   
Sbjct: 180 QKKQTLLFSATPKASTARILKL---EDPRIISIYKEEGFPS--QLRQYFYMMRTGDKINY 234

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV--PVLDLHGKQKQSKRTSTFFEFAR 504
           L TF+  N   K IVF S+C  VKF+  L   + +   +  L G   Q +R   F  F +
Sbjct: 235 LHTFIGSNPEVKGIVFFSTCKEVKFHCLLFERLKLRNRIFCLSGGMSQKQRIDVFKRFVK 294

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
            ++  L CTD+ +RGLD P VD ++QYD P   + Y+HRVGRTAR    RG + ++L+  
Sbjct: 295 EKNGILFCTDLGSRGLDFPKVDVVIQYDCPCNVETYVHRVGRTARNSE-RGESYVYLVHG 353

Query: 565 EVGFL------------QHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARD 612
           E   L            + + D  +     E P  ++  I   +++LV  +  L +  R 
Sbjct: 354 EEKLLTDIQKKGWIKKQEGMEDKGISEEITEGPGVQIRCINNMVKRLVRSSKELNEYCRK 413

Query: 613 GFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFS 647
              +Y + + + S K         I A+ + FG S
Sbjct: 414 YLVTY-EKFLTFSSKRYSEGVIRKIPALYEHFGVS 447

gb|EAL49018.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
(432 aa)

Score: 244 bits (622), Expect: 9.60189e-63
Length: 393, Idn/Pos/Gap = 151/224/9 (38%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L    L+ +E +G+ + T IQ  +IP+AL  +DI+  A+TGSGKT +FL+P+V+ 
Sbjct:  11 FKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQH  70

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA-SHHHQTRAIVMGGANRRTEAEKLI 330
           L   K   R G   III PTRELA Q+  V+ ++  +    T  +++GG +   ++ +L 
Sbjct:  71 LLNVKEKNR-GFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQSVQLA 129

Query: 331 NGTNILVATPGRLLDHLQSTRGF--VFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
               ++V TPGR++ H+++T+G     E ++FLVIDEAD+ LE+ F  E+  ++  LPK 
Sbjct: 130 KRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDYLIEKLPKQ 189

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           R TMLFSAT +TKVE L + S    P+ +  + EQ   TV+ L+Q +  +P + R   L 
Sbjct: 190 RTTMLFSATMSTKVEKLQRASLTH-PVKIK-EEEQKYQTVDTLRQEYCFIPFKYRDGYLI 247

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           + LK  + K II+F   C+G      +L  +    + LHGK  Q KR     +F   +  
Sbjct: 248 SILKETEGKTIIIFTMKCSGCTKLVMMLRQMGYAAIPLHGKMSQQKRLIALEKFKSGKRG 307

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L+ TDVA+RGLDIP VD ++ YD P EPK+Y+HRVGRTAR     G AI  +    +  
Sbjct: 308 ILVATDVASRGLDIPNVDIVINYDCPLEPKDYVHRVGRTARAGKS-GYAITLVTQYSIEL 366

Query: 569 LQHLRDA-KVPLNEYEF-PKEKLADIQTQLEKL 599
            Q +    +  LNEY+   KE +A  Q   E +
Sbjct: 367 YQRIETMIEKKLNEYKVNEKEAIAYSQKANEAM 399

gb|EAA18877.1| RNA helicase, putative [Plasmodium yoelii yoelii]
(869 aa)

Score: 243 bits (619), Expect: 1.81031e-62
Length: 451, Idn/Pos/Gap = 154/243/15 (34%/53%/3%)

Query: 206 LLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFL 265
           +LT   F +LP+S+ TLR + E  F  MT IQ+ +IP+ L  + I A A+TG+GKTL F 
Sbjct: 122 VLTQQEFKTLPISKKTLRSLNENNFTHMTNIQSVSIPIVLLNKHIYAQAQTGTGKTLCFC 181

Query: 266 IPIVELLYKAKWMPRNGT-GAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRT 324
           IP++E LY+      N   G +II PTREL  QIF VL+ L  +H       +GG +   
Sbjct: 182 IPLIEKLYRENIDNYNKILGGLIITPTRELVFQIFEVLNMLNKYHKLNICCAIGGKDEER 241

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           E + + + +NI+V TPGRLL HL++      ++L  L+IDE D+ ++  F + +  IL  
Sbjct: 242 E-KSIFSYSNIIVCTPGRLLYHLENNYYCNLDYLSTLIIDEIDKLIDKSFYDNLKNILLY 300

Query: 385 LPKTR-QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
            PK   Q  LFSAT    +  + K    +   ++ I+          ++Q +      ++
Sbjct: 301 KPKENCQICLFSATICKFLSIILKTFNIKDYEYVSINNNDKYIESNNIKQIYIECSIYEK 360

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPV---LDLHGKQKQSKRTSTFF 500
              L+TFL   + KKIIVF S+C  V+F  E+   I V V   L LHGK KQ+ R +T+ 
Sbjct: 361 INYLYTFLFSKKNKKIIVFFSTCKQVRFMFEVFKKIKVGVMKFLQLHGKLKQTSRLNTYH 420

Query: 501 EFARREH-ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            F+++ +   L  TD+A RGLD  +VDW++ +D P+  + +IHR GRT R  +  G +++
Sbjct: 421 LFSKKNNFVCLFTTDIACRGLDFASVDWVIHFDFPENLETFIHRSGRTGRFTN-VGNSLI 479

Query: 560 FL---LPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRS 616
           FL   + ++  FL  LR+  + + E    K+KL DI  ++  L      ++  A+     
Sbjct: 480 FLTNEIDNKKYFLNVLRENNIEIVEKFIKKQKLFDINKKIHSLNAAFVEIKHLAKKALII 539

Query: 617 YLQ-AYASHSMKDVFNVHELDIAAVAKSFGF 646
           YL+  Y     +D   + +LD+  +A ++G 
Sbjct: 540 YLRHLYIIMKFRD---IKKLDLNQLAYAYGL 567

emb|CAD98517.1| DEAD/DEAH box helicase [Cryptosporidium parvum]
(738 aa)

Score: 242 bits (618), Expect: 2.72466e-62
Length: 489, Idn/Pos/Gap = 161/248/63 (32%/50%/12%)

Query: 206 LLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFL 265
           +++P  F  LP+S  TL G+   G+ +MT IQ   +P +L GRDI+  ARTGSGKTLA  
Sbjct:  67 IMSPDLFSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLA-- 124

Query: 266 IPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRA-IVMGGANRRT 324
                      +   +G  ++I+ PTRELA Q+F V+ ++   H    A  ++GG + ++
Sbjct: 125 ---------DNYCSIDGLLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDIKS 175

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           E+ + IN  NILVATPGRL+ H+  +  +   +L+ LVIDE DR L++GF  ++  IL  
Sbjct: 176 ESSR-INMLNILVATPGRLIQHMDESPLWDANNLKILVIDEVDRMLDMGFLNDIKIILDG 234

Query: 385 LPKT---RQTMLFSATQTTKVEDLAKVSFQQKPLHL-GIDAEQPVATVEGLQQGFTIVPS 440
           +P +   RQTMLFSAT  +    + K+    +P  L     +   A  + LQQ +  V  
Sbjct: 235 IPSSSSGRQTMLFSATVYSSELSIKKIENLFRPNQLESFSLDNIGALPKNLQQLYIKVAI 294

Query: 441 EQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV--PVLDLHGKQKQSKRTST 498
            ++   LF FL+ +  KKIIVF+S C  V+F + +   + +   VL+L+GKQ   KR   
Sbjct: 295 HEKIDTLFNFLRTHSNKKIIVFVSCCKQVRFLSTVFTKLKIGCKVLELYGKQSLQKRLEV 354

Query: 499 FFEFARREH-----------------------ATLLCTDVAARGLDIPAVDWIVQYDPPD 535
              F   E                        A L CTD+A+RGLD P +DW++Q D P+
Sbjct: 355 VHNFYTHESLVTSNEKLKLKNIGRNSKSSYDGAVLFCTDIASRGLDFPKIDWVIQLDIPE 414

Query: 536 EPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQ 595
               Y+HR+GRTAR +      I                 KV  NEYE        I + 
Sbjct: 415 NADTYVHRIGRTARYISKGINTI----------------KKVTPNEYEMRYT----IHSS 454

Query: 596 LEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVF-NVHELDIAAVAKSFGFSAPPRICL 654
           L+ +   +  +++ A   F +Y+++    +  D    + +LD +A A S G + PP+I +
Sbjct: 455 LQSICASDQNIKEMAERAFSAYIKSLFILTPNDKREELKKLDFSAFALSLGLAIPPKIKI 514

Query: 655 DVLERAKKI 663
           +  E  K++
Sbjct: 515 NNTESEKRL 523

emb|CAA09212.1| RNA helicase [Arabidopsis thaliana]
gb|AAN13096.1| RNA helicase [Arabidopsis thaliana]
dbj|BAB10011.1| RNA helicase [Arabidopsis thaliana]
ref|NP_196479.1| DEAD box RNA helicase (RH25) [Arabidopsis thaliana]
pir||T51348 RNA helicase RH25 [imported] - Arabidopsis thaliana
(563 aa)

Score: 242 bits (617), Expect: 3.58833e-62
Length: 472, Idn/Pos/Gap = 164/257/23 (34%/54%/4%)

Query: 201 KPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGK 260
           K S   L+  RFD  PLS  TL+GIE+ GF  MT +Q   +PL L G+DILA A+TG+GK
Sbjct:  71 KTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGK 130

Query: 261 TLAFLIPIVELLYKAKWMPRNGTG----AIIIAPTRELAMQIFGVLHDLASHHHQTRA-I 315
           T+AFL+P +E + KA    R+        +++ PTRELA Q     + L  +H      +
Sbjct: 131 TVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQV 190

Query: 316 VMGGANRRTEAEKLING-TNILVATPGRLLDHLQSTRGFV--FEHLRFLVIDEADRCLEI 372
           V+GG    TE  +L      ILVATPGRL DH+ +T GF      ++ LV+DEAD  L++
Sbjct: 191 VIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDM 250

Query: 373 GFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQ 432
           GF  E+  I+  +PK RQT LFSAT + +V  +  V+ ++    +    E    T + + 
Sbjct: 251 GFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVS 310

Query: 433 QGFTIVPSEQRFRLLFTFLKR----NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHG 488
           Q + I   ++ F LL+  LK+    N   K+I+F ++    +  A+LL  + + V ++H 
Sbjct: 311 QMYMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHS 370

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTA 548
           ++ QS RT    EF + +   L+ +DV+ARG+D P V  +VQ   P + ++YIHR+GRT 
Sbjct: 371 RKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTG 430

Query: 549 R-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQ 607
           R G  G G  +L L P E  FL  ++D  +P+ +   P      ++   + L++     +
Sbjct: 431 RKGKEGEG--VLLLAPWEEYFLSSVKD--LPITKSSLPPIDHEAVKKVQKGLIQVEMTNK 486

Query: 608 KSARDGFRSYLQAYASHS--MKDVFNVHELDIAAVAKSFGFSAPPRICLDVL 657
           ++A   ++++L  Y S     +D   + EL     ++S G S PP I +++L
Sbjct: 487 EAA---YQAWLGYYKSQKKIARDTTRLVEL-ANEFSRSMGLSIPPAIPVNIL 534

emb|CAG01158.1| unnamed protein product [Tetraodon nigroviridis]
(634 aa)

Score: 241 bits (615), Expect: 6.06991e-62
Length: 357, Idn/Pos/Gap = 144/223/12 (40%/62%/3%)

Query: 299 FGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHL 358
           FG  HD ++       +V+GG + + E+E+ I  TNI++ TPGRLL H+  T  F   +L
Sbjct:  25 FGKNHDFSA------GLVIGGKDLKLESEQ-IQHTNIIICTPGRLLQHMDQTVSFHASNL  77

Query: 359 RFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLG 418
             LV+DEADR L++GF E ++ I+  LPK+RQT+LFSATQT  V+DLA++S ++ P ++ 
Sbjct:  78 HVLVLDEADRILDMGFTETLNAIVENLPKSRQTLLFSATQTKSVKDLARLSLKE-PEYVW 136

Query: 419 IDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNY 478
              +   +T   L+Q + +    Q+  +L++F++ + +KKI+VF + C  V++   +   
Sbjct: 137 AHEKAKFSTPASLEQSYLVCELHQKVDMLYSFIRNHLKKKIMVFFACCKEVQYLFRVFCR 196

Query: 479 I--DVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDE 536
           +   VP+L LHGKQ+Q KR   + +F R+  A L  TD+AARGLD PAV+W++Q+D P++
Sbjct: 197 LRPGVPILALHGKQQQMKRVEVYNDFLRKNTAVLFATDIAARGLDFPAVNWVLQFDCPED 256

Query: 537 PKEYIHRVGRTARGVHGRGRAILFLLPS-EVGFLQHLRDAKVPLNEYEFPKEKLADIQTQ 595
              YIHRVGRTAR   G G A+L LLPS E G L+ L + KVP+ + +   EKL ++Q +
Sbjct: 257 ADTYIHRVGRTARYKEG-GEALLLLLPSEEKGMLRQLLEKKVPVQKIQVNAEKLQNVQQK 315

Query: 596 LEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           LE  +      ++ A+  F SYL++      K+VF+V +L   A A+S G +  PR+
Sbjct: 316 LEGFLAQEQEQKERAQRCFVSYLRSVYLMKNKEVFDVFQLPTEAYAQSLGLAVAPRV 372

gb|EAA59332.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
ref|XP_408370.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
(465 aa)

Score: 241 bits (614), Expect: 6.76534e-62
Length: 434, Idn/Pos/Gap = 160/238/21 (36%/54%/4%)

Query: 159 ASSRATVHEMEPLARPCPEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLS 218
           A  +  + E +P      E    SS    S   E  +  E+P P+        F  L + 
Sbjct:   3 ALKKRKITEKQPETNSDSEAESVSSRG--SAKDETQTSGEEPAPAKS------FKELGII  54

Query: 219 EPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWM 278
           +      E MG+   T IQ++AIPLAL GRD++  A TGSGKT AF +P+++ L +A   
Sbjct:  55 DQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALMEA--- 111

Query: 279 PRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVA 338
           P+   G +++APTRELA QI      L S      A+++GG +   ++  L    +I+VA
Sbjct: 112 PQTLFG-LVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGKKPHIIVA 170

Query: 339 TPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQ 398
           TPGRLLDHL++T+GF   +L++L IDEADR L++ F E + +I+RILP+TR T LFSAT 
Sbjct: 171 TPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTRHTYLFSATM 230

Query: 399 TTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKK 458
           +TKVE L + S    P+ + + ++    TV  LQ  +  +P + +   L   L     + 
Sbjct: 231 STKVESLQRASLSN-PVRVSVSSK--YQTVSTLQSSYICIPHKHKNLYLVYLLNEFAGQS 287

Query: 459 IIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAAR 518
            I+F ++ +  +  A +L  +    + LHG+  QS R     +F  R    L+ TDVAAR
Sbjct: 288 AIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAAR 347

Query: 519 GLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF---LQHLRDA 575
           GLDIP+VD +  +D P + K YIHRVGRTAR     G AI F+   +V     ++H    
Sbjct: 348 GLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKS-GVAISFVTQYDVEVWLRIEHALSK 406

Query: 576 KVPLNEYEFPKEKL 589
           K+P  EY+  K+++
Sbjct: 407 KLP--EYQVEKDEV 418

gb|AAK59619.1| putative RNA helicase [Arabidopsis thaliana]
(563 aa)

Score: 240 bits (612), Expect: 1.28621e-61
Length: 472, Idn/Pos/Gap = 163/257/23 (34%/54%/4%)

Query: 201 KPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGK 260
           K S   L+  RFD  PLS  TL+GIE+ GF  MT +Q   +PL L G++ILA A+TG+GK
Sbjct:  71 KTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKNILAKAKTGTGK 130

Query: 261 TLAFLIPIVELLYKAKWMPRNGTG----AIIIAPTRELAMQIFGVLHDLASHHHQTRA-I 315
           T+AFL+P +E + KA    R+        +++ PTRELA Q     + L  +H      +
Sbjct: 131 TVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQV 190

Query: 316 VMGGANRRTEAEKLING-TNILVATPGRLLDHLQSTRGFV--FEHLRFLVIDEADRCLEI 372
           V+GG    TE  +L      ILVATPGRL DH+ +T GF      ++ LV+DEAD  L++
Sbjct: 191 VIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDM 250

Query: 373 GFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQ 432
           GF  E+  I+  +PK RQT LFSAT + +V  +  V+ ++    +    E    T + + 
Sbjct: 251 GFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVS 310

Query: 433 QGFTIVPSEQRFRLLFTFLKR----NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHG 488
           Q + I   ++ F LL+  LK+    N   K+I+F ++    +  A+LL  + + V ++H 
Sbjct: 311 QMYMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHS 370

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTA 548
           ++ QS RT    EF + +   L+ +DV+ARG+D P V  +VQ   P + ++YIHR+GRT 
Sbjct: 371 RKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTG 430

Query: 549 R-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQ 607
           R G  G G  +L L P E  FL  ++D  +P+ +   P      ++   + L++     +
Sbjct: 431 RKGKEGEG--VLLLAPWEEYFLSSVKD--LPITKSSLPPIDHEAVKKVQKGLIQVEMTNK 486

Query: 608 KSARDGFRSYLQAYASHS--MKDVFNVHELDIAAVAKSFGFSAPPRICLDVL 657
           ++A   ++++L  Y S     +D   + EL     ++S G S PP I +++L
Sbjct: 487 EAA---YQAWLGYYKSQKKIARDTTRLVEL-ANEFSRSMGLSIPPAIPVNIL 534

emb|CAI16565.1| DEAD\/H box polypeptide 31 [Homo sapiens]
emb|CAH70532.1| DEAD\/H box polypeptide 31 [Homo sapiens]
(775 aa)

Score: 239 bits (611), Expect: 1.54536e-61
Length: 476, Idn/Pos/Gap = 166/246/80 (34%/51%/16%)

Query: 183 SPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGF------------ 230
           SP   S+S+   +++E+    +  L  +  D   L  P ++ ++E  F            
Sbjct: 180 SPKKHSVSTSDRNQEERQCIKTSSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHELGLHP 239

Query: 231 ------------ARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAK 276
                       + MT +Q ++IP+ L GRD L  ++TGSGKTLA+ IP+V+ L   ++K
Sbjct: 240 HLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESK 299

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNI 335
               +G  A+++ PTRELA+Q F  +  L          ++MGG  R++E  +L  G NI
Sbjct: 300 IQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINI 359

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTM 392
           L++TPGRL+DH++ST+   F  LR+LV DEADR L++GFE+++  IL  +    + RQ +
Sbjct: 360 LISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNV 419

Query: 393 LFSATQTTKVEDLAKVSFQQKPLHLGI------------------------DAEQPVATV 428
           L SAT T  V  LA +S    P+ + +                        D     A  
Sbjct: 420 LLSATLTEGVTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIP 478

Query: 429 EGLQQGFTIVPSEQRFRLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELL-------- 476
           E L+Q  T+VPS+ R   L  F+    K  + +K++VF SSC  V+F+  L         
Sbjct: 479 ESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLLSSS 538

Query: 477 ----------NYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVD 526
                       + +  L LHG  +Q +RT+ F EF+      LLCTDVAARGLD+P V 
Sbjct: 539 GAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVT 598

Query: 527 WIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNE 581
           WIVQY+ P  P EYIHR+GRTAR G H  G ++L L PSE  ++  L   K+ ++E
Sbjct: 599 WIVQYNAPSSPAEYIHRIGRTARIGCH--GSSLLILAPSEAEYVNSLASHKINVSE 652

emb|CAA82362.1| Hypothetical protein T26G10.1 [Caenorhabditis elegans]
sp|P34580|YN21_CAEEL Putative ATP-dependent RNA helicase T26G10.1 in chromosome III
ref|NP_499069.1| DEAD box (54.2 kD) (3K494) [Caenorhabditis elegans]
(489 aa)

Score: 239 bits (610), Expect: 2.50727e-61
Length: 339, Idn/Pos/Gap = 131/200/7 (38%/58%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L +S+P     + +G+ + ++IQ  A+P AL G+D++  A TGSGKT AF IP+++ 
Sbjct:  46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L             +++ PTRELA QI      L S      A+++GG +   +A  L  
Sbjct: 106 LLDHP----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALAR 161

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+VATPGRL+DHL++T+GF  + L+FL++DEADR L + FE E+ +IL+++P+ R+T
Sbjct: 162 RPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRT 221

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT T KV  L + S +  P  + + +     TV+ L+Q +  VP++ +   L   L
Sbjct: 222 YLFSATMTKKVSKLERASLRD-PARVSVSSR--YKTVDNLKQHYIFVPNKYKETYLVYLL 278

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
             +     IVF ++C      A +L  + +  + LHG+  Q KR  +  +F  +    L+
Sbjct: 279 NEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILV 338

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           CTDVAARGLDIP VD ++ YD P + K+Y+HRVGRTAR 
Sbjct: 339 CTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARA 377

emb|CAE65221.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
(486 aa)

Score: 238 bits (606), Expect: 6.54517e-61
Length: 339, Idn/Pos/Gap = 132/198/7 (38%/58%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L +S+P       +G+ + ++IQ  A+P AL G+D++  A TGSGKT AF IP+++ 
Sbjct:  46 FAELGVSQPLCDACLRLGWTKPSKIQQAALPHALEGKDVIGLAETGSGKTGAFAIPVLQS 105

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L             +++ PTRELA QI      L S      A+++GG +   +A  L  
Sbjct: 106 LLDHP----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIVAVIVGGVDMAAQAMALAR 161

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+VATPGRL+DHL++T+GF  + L+FL++DEADR L + FE E+ +IL+++PK R+T
Sbjct: 162 RPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPKERRT 221

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT T KV  L + S +  P  + I       TV+ L+Q +  +P++ +   L   L
Sbjct: 222 YLFSATMTKKVSKLERASLRD-PARVSISTR--YKTVDNLKQHYIFIPNKYKETYLVYLL 278

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
             +     IVF ++C      A +L  + +  + LHG+  Q KR  +  +F  +    L+
Sbjct: 279 NEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILV 338

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           CTDVAARGLDIP VD ++ YD P + K+Y+HRVGRTAR 
Sbjct: 339 CTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARA 377

gb|EAA62940.1| hypothetical protein AN3176.2 [Aspergillus nidulans FGSC A4]
ref|XP_407313.1| hypothetical protein AN3176.2 [Aspergillus nidulans FGSC A4]
(638 aa)

Score: 237 bits (605), Expect: 9.0624e-61
Length: 501, Idn/Pos/Gap = 174/261/52 (34%/52%/10%)

Query: 200 PKPSSGLLTPHRFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTG 257
           PKP SG  +   +D++  PLSE  L  +  MGF RMT +QA AIPL ++ +D++  A TG
Sbjct:   3 PKPPSGT-SSRAWDAVNPPLSEWVLDAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTG  61

Query: 258 SGKTLAFLIPIVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV 316
           SGKTL+FLIP+VE LL   + + ++  GAII++PTRELA QI+ VL  L + H  + A++
Sbjct:  62 SGKTLSFLIPVVEKLLRLEEPIKKHHVGAIIVSPTRELASQIYNVLTSLLAFHPASAAVI 121

Query: 317 -------------------------MGGANRRTE--AEKLINGTNILVATPGRLLDHLQS 349
                                    +GG+    E  +  L    N+LVATPGRLL+ L S
Sbjct: 122 NTSETEDVPRPKHSSSVLRVVPQLLLGGSTSPAEDLSTFLKRSPNLLVATPGRLLELLSS 181

Query: 350 TRGFVFE-HLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKV 408
              +  +     LV+DEADR L++GF+E +  ILR LPK R+T LFSA+ +  V+ + +V
Sbjct: 182 PHVYCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLPKQRRTGLFSASVSEAVDQIVRV 241

Query: 409 SFQQKPLHL-------GIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ--RKKI 459
             +     +       G+D ++  A+   LQ  +   P   +F  L   L   Q    K 
Sbjct: 242 GLRNPVKVVVKVKGASGVDDKRTPAS---LQMTYLTQPPTGKFPALKHILNSVQPTPSKS 298

Query: 460 IVFMSSCNGVKFYAELLNYI---DVPVLDLHGKQKQSKRTSTFFEFARREH-ATLLCTDV 515
           I F+S+C+GV + + +L  I   D  ++ LHGK   + R   F  F    + A LL TDV
Sbjct: 299 IFFVSTCSGVDYLSVILPLILGNDFQLIPLHGKHPANVRQKNFNRFVNAHNPAILLTTDV 358

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDA 575
           A+RGLDIP+VD +VQ DPP +PK +IHR GR  R        +L     E  ++  L   
Sbjct: 359 ASRGLDIPSVDLVVQIDPPSDPKTFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSFLEVR 418

Query: 576 KVPLNEYEFP----KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFN 631
           K P+  +  P      + A       K+V+ +  +    +  F S+L++Y+ H    +F 
Sbjct: 419 KTPVAPFPHPITVSDAEAAAATETARKVVKADRAIHDRGQKAFVSWLRSYSKHQASSIFR 478

Query: 632 VHELDIAAVAKSFGFSAPPRI 652
           V +LD   + K++G    P++
Sbjct: 479 VADLDWEGLGKAWGLLKLPKM 499

emb|CAA91889.1| SPAC30D11.03 [Schizosaccharomyces pombe]
ref|NP_593214.1| ATP dependent RNA helicase [Schizosaccharomyces pombe]
sp|Q09903|YAJ3_SCHPO Putative ATP-dependent RNA helicase C30D11.03
pir||S62561 ATP dependent RNA helicase - fission yeast  (Schizosaccharomyces pombe)
(754 aa)

Score: 237 bits (604), Expect: 1.2035e-60
Length: 377, Idn/Pos/Gap = 148/228/15 (39%/60%/3%)

Query: 189 LSSEHASEQEQPKPSSGLLTPHR-FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSG 247
           ++ ++A   E  K  S + T H  F S+ LS P L+G+  +GF   T+IQ + IPLAL G
Sbjct: 237 IAKKNAFFAEGDKEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLG 296

Query: 248 RDILASARTGSGKTLAFLIPIVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA 306
           +DI+ +A TGSGKT AF++PI+E LLY+ K +P   T  +I+ PTRELAMQ   V   +A
Sbjct: 297 KDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPT--TRVLILCPTRELAMQCHSVATKIA 354

Query: 307 SHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEA 366
           S       + +GG + + + ++L    +I++ATPGR +DH+++++GF  E++  +V+DEA
Sbjct: 355 SFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEA 414

Query: 367 DRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA 426
           DR LE GF +E++EI++  PK+RQTMLFSAT T KV+DL ++S   +P+ + +D ++  A
Sbjct: 415 DRMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSL-NRPVRVFVDNKKTTA 473

Query: 427 TVEGLQQGFTIV-PSEQRFR---LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVP 482
            +  L Q F  V P  +  R   L++   +   R+ II F S     K    +   + + 
Sbjct: 474 KL--LTQEFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRV-IFGLLSLN 530

Query: 483 VLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIH 542
             ++HG   Q +R     +F   +   LL TDVA+RG+DI  ++ ++ Y+ P   + Y+H
Sbjct: 531 ATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLH 590

Query: 543 RVGRTARGVHGR-GRAI 558
           RVGRTAR   GR GRAI
Sbjct: 591 RVGRTARA--GRSGRAI 605

ref|NP_702071.1| RNA helicase, putative [Plasmodium falciparum 3D7]
gb|AAN36795.1| RNA helicase, putative [Plasmodium falciparum 3D7]
(946 aa)

Score: 236 bits (602), Expect: 1.84184e-60
Length: 452, Idn/Pos/Gap = 155/243/16 (34%/53%/3%)

Query: 206 LLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFL 265
           +LT   F +LP+S+ TLR + E  F  MT IQ  ++P+ L  + I A A+TG+GKTL F 
Sbjct: 119 VLTSAEFKTLPISKRTLRALNENNFIYMTNIQYVSLPIVLLNKHIYAQAQTGTGKTLCFC 178

Query: 266 IPIVELLYKAKWMPRNGT-GAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRT 324
           IP++E +Y+      N   G III PTREL  QIF VL+ L  +H       +GG N   
Sbjct: 179 IPLIEKMYRNSIDNYNKILGGIIITPTRELVFQIFEVLNMLNKYHKLNICCAIGGKNEEK 238

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           E + + +  NI+V T GRLL HL++      ++L  L+IDE D+ ++  F + +  IL  
Sbjct: 239 E-KSIFSYANIIVCTTGRLLYHLENNYYCNLDYLSTLIIDEIDKLIDKSFYDNLKNILLY 297

Query: 385 LPKTR-QTMLFSATQTTKVEDLAKVSFQQKPL-HLGIDAEQPVATVEGLQQGFTIVPSEQ 442
            PK   Q  LFSAT   K  ++   +F  K   ++ I+          ++Q +      +
Sbjct: 298 KPKENCQICLFSAT-ICKFLNVILNTFHIKDYEYVSINDNDKYIESNNVKQIYIECDIYE 356

Query: 443 RFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPV---LDLHGKQKQSKRTSTF 499
           +   L+TFL   + KKIIVF S+C  V+F  E+   I V V   L LHGK KQ+ R +T+
Sbjct: 357 KINYLYTFLFSKKNKKIIVFFSTCKQVRFMYEVFKKIKVGVMKFLQLHGKLKQTSRLNTY 416

Query: 500 FEFARREH-ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAI 558
             F+++++   L  TD+A RGLD  ++DW++ +D PD  + +IHR GRT R  +  G ++
Sbjct: 417 HFFSKKKNFVCLFTTDIACRGLDFSSIDWVIHFDFPDNIETFIHRSGRTGRFTN-MGNSL 475

Query: 559 LFL---LPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFR 615
           +FL   + ++  FL  L+D  + + E    K+KL DI+ ++  L      ++  A+    
Sbjct: 476 IFLTKQIDNKKLFLNVLKDNNIFIKEKFIKKQKLFDIKNKIHSLNAAFVDIKHLAKKALI 535

Query: 616 SYLQ-AYASHSMKDVFNVHELDIAAVAKSFGF 646
            YL+  Y     KD+    ++ +  +A S+G 
Sbjct: 536 IYLRHLYIVMKFKDI--KKKIQLNELAYSYGL 565

emb|CAB90153.1| SPAC823.08c [Schizosaccharomyces pombe]
ref|NP_593835.1| putative atp-dependent RNA helicase [Schizosaccharomyces pombe]
(465 aa)

Score: 236 bits (601), Expect: 2.26905e-60
Length: 381, Idn/Pos/Gap = 143/218/11 (37%/57%/2%)

Query: 209 PHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI 268
           P  F  L + +      E++GF   T IQ  AIP+ L+ RD++  A+TGSGKT AF +P+
Sbjct:  45 PKTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPV 104

Query: 269 VELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEK 328
           ++ L    W   +   A+++APTRELA QI      +         +++GG +  T+A  
Sbjct: 105 IQEL----WNNPSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVA 160

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L    ++LV TPGRL+DHL++T+GF  ++L++L++DEADR L++ F   + +IL+I+P  
Sbjct: 161 LSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHE 220

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           R+T+LFSAT T+KVE L + S  Q P+ + + ++   +TV+ L Q +   P + +   L 
Sbjct: 221 RRTLLFSATMTSKVEKLQRASLHQ-PVRVAVSSK--FSTVDTLIQRYLFFPFKHKDTYLV 277

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
             +       II+F  + N  +  A LL  +    + LHG+  QS R     +F     +
Sbjct: 278 YLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARS 337

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVG 567
           TL+ TDVAARGLDIP VD ++ YD P + K YIHRVGRTAR   GR G++I  +   ++ 
Sbjct: 338 TLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARA--GRAGKSIALVTQYDLE 395

Query: 568 -FLQHLRDAKVPLNEYEFPKE 587
            FL+        + EYE  KE
Sbjct: 396 PFLRIEATIGKKMQEYEIDKE 416

gb|EAA14161.2| ENSANGP00000015831 [Anopheles gambiae str. PEST]
ref|XP_318913.2| ENSANGP00000015831 [Anopheles gambiae str. PEST]
(367 aa)

Score: 236 bits (601), Expect: 2.38554e-60
Length: 349, Idn/Pos/Gap = 139/208/13 (39%/59%/3%)

Query: 234 TEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRE 293
           ++IQ  AIPLAL G+DI+  A TGSGKT AF +PI++ L      P+    A+++ PTRE
Sbjct:  28 SKIQREAIPLALQGKDIIGLAETGSGKTGAFALPILQALLDN---PQR-YFAVVLTPTRE  83

Query: 294 LAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGF 353
           LA QI      L +       +++GG +  T+A +L    +I++ATPGRL+DHL++T+GF
Sbjct:  84 LAYQISEQFEALGATIGVKCCVIVGGMDLVTQAIQLARKPHIIIATPGRLVDHLENTKGF 143

Query: 354 VFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQK 413
             + +R+LV+DEADR L + FEEE+++IL+++P+ R+T LFSAT T KV+ L + S +  
Sbjct: 144 SLKAIRYLVMDEADRILNMDFEEEVNKILKVMPRERRTFLFSATMTKKVKKLERASLRDP 203

Query: 414 PLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYA 473
              + ++      TVE L Q +  +P+  +   L   L        ++F S+CN     A
Sbjct: 204 ---VKVEVSSKYQTVEKLLQYYLFIPARYKNVYLVHVLNELAGNSFMIFCSTCNNTVRTA 260

Query: 474 ELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDP 533
            +L  + +  + LHG+  Q+KR +   +F  +    L+ TDVA+RGLDIP VD ++  D 
Sbjct: 261 LMLRALGLAAVPLHGQMTQNKRLAALNKFKSQARQILISTDVASRGLDIPHVDVVLNLDI 320

Query: 534 PDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQ---HLRDAKVP 578
           P   K+YIHRVGRTAR   GR G+AI F+   +V   Q   HL   K+P
Sbjct: 321 PMHSKDYIHRVGRTARA--GRAGQAITFVTQYDVELYQRIEHLLGKKLP 367

gb|EAA07030.2| ENSANGP00000000531 [Anopheles gambiae str. PEST]
ref|XP_311385.2| ENSANGP00000000531 [Anopheles gambiae str. PEST]
(552 aa)

Score: 236 bits (601), Expect: 2.57157e-60
Length: 537, Idn/Pos/Gap = 165/272/93 (30%/50%/17%)

Query: 206 LLTPHRFDSLPLSEPTLRGIEEM-GFARMTEIQARAIPLALSGRDILASARTGSGKTLAF 264
           L +   FDSL +   + + I ++  +  +T +Q+ AIP  L G D L  A+TGSGKTLA+
Sbjct:   8 LFSEQSFDSLDIHPHSKKNIADLLQYEHLTTVQSMAIPSLLKGTDALIRAQTGSGKTLAY  67

Query: 265 LIPIVELLY--KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGAN 321
            +P++E L+  + +    +G  A++I PTRELA+Q + ++  L           + GG  
Sbjct:  68 ALPLIERLHTIRPQIHRSDGIRAVVIVPTRELAVQTYELIQKLLKPFTWIVPGYLTGGEK 127

Query: 322 RRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEI 381
           R+TE  +L  G NIL+ATPGRL DH+++T    F ++  LV+DEADR LE+G+E ++ +I
Sbjct: 128 RKTEKARLRAGLNILIATPGRLCDHIRNTESLKFGNVCCLVLDEADRLLELGYETDVKQI 187

Query: 382 LRILPKTR-----------QTMLFSATQTTKVEDLAKVSFQQKPLHLG----IDAEQP-- 424
           +  + + R           QT+L SAT T  V++LA ++ Q  P+++     +  E P  
Sbjct: 188 IEAMREAREEKDENEAMKLQTVLLSATLTASVKELAGLTLQD-PVYVETSEVVQRETPSV 246

Query: 425 -----------------VATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK---KIIVFMS 464
                            V+    ++Q + +   +QR   L   +   QR+   KI+VFM+
Sbjct: 247 EQGANICTDQLLNVGDYVSIPATVKQRYLVTVPKQRLVALSALIVHEQRQKPSKILVFMA 306

Query: 465 SCNGVKFYAELLNYI---------------------------DVPVLDLHGKQKQSKRTS 497
           + + V F+ +++  +                            +    LHG   Q +R S
Sbjct: 307 TQDLVNFHYDVMTEVLTLQNESEEDINGENNGPTDSSNVLLPGLKFYKLHGHMTQLERIS 366

Query: 498 TFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
            F EF +   A L+CTDVAARG+DIP VD +VQY  P    +Y+HRVGRTAR  H  G+A
Sbjct: 367 VFNEFRKATAAVLICTDVAARGIDIPLVDLVVQYHAPQILADYVHRVGRTARAGH-TGKA 425

Query: 558 ILFLLPSEVGFLQHLRDAKVPLNEYEF------------------PKEKLA---DIQTQL 596
           ++FL P+E  F+Q+L D  + + E +                   P  K+    +IQ + 
Sbjct: 426 VIFLEPAEQEFIQYLTDKHIRIQEQKIDGIIKNFGLFVNRNQKPKPINKIHWAYEIQHRY 485

Query: 597 EKLVEGNYYLQKSARDGFRSYLQAYAS--HSMKDVFNVHELDIAAVAKSFGFSAPPR 651
           E+L++    L  SA+  + S+++ Y++    ++++F +  + +   AK  G S  P+
Sbjct: 486 ERLIKKEDQLFDSAKKAYVSWVRYYSNFQKELRNIFCIKAIHLGHYAKCLGLSEAPK 542

emb|CAG58463.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_445552.1| unnamed protein product [Candida glabrata]
(725 aa)

Score: 235 bits (600), Expect: 3.14171e-60
Length: 400, Idn/Pos/Gap = 147/236/16 (36%/59%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F+ L LS P ++G+  +G+ + + IQ+  IP+AL G+DI+A A TGSGKT AF+IPI+E 
Sbjct: 208 FNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 267

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH-HHQTRAIVMGGANRRTEAEKL 329
           LLYK   +    T  I++ PTRELA+Q+  V   +     + T  + +GG N R + + L
Sbjct: 268 LLYKPAKVA--STRVIVLTPTRELAIQVADVGKKIGQFVSNLTFGLAVGGLNLRQQEQML 325

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               +I++ATPGR +DH++++  F  + +  LVIDEADR LE GF++E++EI+ +LP  R
Sbjct: 326 KTRPDIVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDGFQDELNEIMSLLPSKR 385

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR--LL 447
           QT+LFSAT  ++++ L  +S  ++P+ + ID  +  AT   L Q F  +      +  LL
Sbjct: 386 QTLLFSATMNSRIKQLISLSL-KRPVRIMIDPPKQAAT--KLTQEFVRIRKRDHLKPSLL 442

Query: 448 FTFLKR---NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
           F  +++   N +K+I+VF++  +       +L  + + V +LHG   Q +R  +  +F  
Sbjct: 443 FNLIRKLDPNGQKRIVVFVARKDMAHKLRIILGLLGMAVAELHGSLTQEQRLDSVNKFKS 502

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
            +   L+CTD+A+RGLDIP ++ ++ YD P   + Y+HRVGRTAR   GR GR+I F+  
Sbjct: 503 LQVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARA--GREGRSITFVGE 560

Query: 564 SEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGN 603
           +       ++DA   +N+ E P  K         ++ E N
Sbjct: 561 ASAE-RSIVKDAIRGVNDSEIPGSKAVGRNVDWNQVEETN 599

emb|CAG86536.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_458454.1| unnamed protein product [Debaryomyces hansenii]
(771 aa)

Score: 234 bits (598), Expect: 5.44912e-60
Length: 384, Idn/Pos/Gap = 149/234/18 (38%/60%/4%)

Query: 187 QSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALS 246
           + ++  +A E+E       L T   F SL LS P L+G+ ++G+ + + IQ+  IP+AL 
Sbjct: 237 EDMAEFYADEEEATTAKKQLHTT--FQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALL 294

Query: 247 GRDILASARTGSGKTLAFLIPIVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDL 305
           G+DI+A A TGSGKT A++IPI+E LLYK   +  + T  I++APTRELA+Q+  V   +
Sbjct: 295 GKDIVAGAVTGSGKTAAYMIPIIERLLYKPAKI--SSTRVIVLAPTRELAIQVCDVGKKI 352

Query: 306 ASH-HHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVID 364
               ++    + +GG N R + ++L    +I++ATPGRL+DH++++  F  + L  LVID
Sbjct: 353 GQFVNNLNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSIDSLEVLVID 412

Query: 365 EADRCLEIGFEEEMHEILRILPK-TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQ 423
           EADR L+ GF+ E+ EIL ++P+  RQT+L+SAT  TK++DL ++S Q KP+ + ID   
Sbjct: 413 EADRMLDEGFQAELTEILSLIPRHKRQTLLYSATMNTKIQDLIQLSLQ-KPVRVMIDP-- 469

Query: 424 PVATVEGLQQGFTIVPSEQRFR--LLFTFLKR---NQRKKIIVFMSSCNGVKFYAELLNY 478
           P +    L Q F  +      +  LLF  +K    +Q+ +I+VF++          +L  
Sbjct: 470 PKSAAIKLVQEFVRIRKRDHLKPALLFQLIKSVDPSQQNRIVVFVARKESAHKLRIILGL 529

Query: 479 IDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPK 538
           + + V +LHG   Q +R ++  +F       L+CTD+AARGLDIP ++ ++ YD P   +
Sbjct: 530 LGMRVSELHGSLTQEQRLASVNDFKNLTVPVLICTDLAARGLDIPKIEIVINYDMPKTHE 589

Query: 539 EYIHRVGRTARGVHGR-GRAILFL 561
            Y+HRVGRTAR   GR G++I F+
Sbjct: 590 IYLHRVGRTARA--GREGKSITFV 611

emb|CAI00318.1| RNA helicase, putative [Plasmodium berghei]
(771 aa)

Score: 234 bits (597), Expect: 6.60192e-60
Length: 451, Idn/Pos/Gap = 153/242/16 (33%/53%/3%)

Query: 206 LLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFL 265
           +LT   F +LP+S+ TLR + E  F  MT IQ+ +IP+ L  + I A A+TG+GKTL F 
Sbjct: 121 VLTQQEFKTLPISKRTLRSLNENNFTHMTNIQSVSIPIVLLNKHIYAQAQTGTGKTLCFC 180

Query: 266 IPIVELLYKAKWMPRNGT-GAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRT 324
           IP++E LY+      N   G +II PTREL  QIF VL+ L  +H       +GG +   
Sbjct: 181 IPLIEKLYRENIDNYNKILGGLIITPTRELVFQIFEVLNMLNKYHKLNICCAIGGKDEER 240

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           E + + + +NI+V T GRLL HL++      ++L  L+IDE D+ ++  F + +  IL  
Sbjct: 241 E-KSIFSYSNIIVCT-GRLLYHLENNYYCNLDYLSTLIIDEIDKLIDKSFYDNLKNILLY 298

Query: 385 LPKTR-QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
            PK   Q  LFSAT    +  + K    +   ++ I+          ++Q +      ++
Sbjct: 299 KPKDNCQICLFSATICKFLNIILKTFNIKDYEYVSINNNDKYIESNNIKQIYIECSIYEK 358

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPV---LDLHGKQKQSKRTSTFF 500
              L+TFL   + KKIIVF S+C  V+F  E+   I V V   L LHGK KQ+ R +T+ 
Sbjct: 359 INYLYTFLFSKKNKKIIVFFSTCKQVRFMFEVFKKIKVGVMKFLQLHGKLKQTSRLNTYH 418

Query: 501 EFARREH-ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAIL 559
            F+++ +   L  TD+A RGLD  +VDW++ +D P+  + +IHR GRT R  +  G +++
Sbjct: 419 LFSKKNNFVCLFTTDIACRGLDFASVDWVIHFDFPENLETFIHRSGRTGRFTN-VGNSLI 477

Query: 560 FL---LPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRS 616
           FL   + ++  FL  LR+  + + E    K+KL DI  ++  L      ++  A+     
Sbjct: 478 FLTNEIDNKKYFLNVLRENNIEIVEKFIKKQKLFDINKKIHSLNAAFVEIKHLAKKSLII 537

Query: 617 YLQ-AYASHSMKDVFNVHELDIAAVAKSFGF 646
           YL+  Y     +D   + +LD+  +A ++G 
Sbjct: 538 YLRHLYIIMKFRD---IKKLDLNQLAYAYGL 565

emb|CAA97452.1| DRS1 [Saccharomyces cerevisiae]
emb|CAA62783.1| L1345/DRS1 protein [Saccharomyces cerevisiae]
sp|P32892|DRS1_YEAST Probable ATP-dependent RNA helicase DRS1
ref|NP_013093.1| Drs1p [Saccharomyces cerevisiae]
(752 aa)

Score: 234 bits (596), Expect: 1.03597e-59
Length: 358, Idn/Pos/Gap = 140/220/15 (39%/61%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F+SL LS P L+G+  +G+ + + IQ+  IP+AL G+DI+A A TGSGKT AF+IPI+E 
Sbjct: 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH-HHQTRAIVMGGANRRTEAEKL 329
           LLYK   +    T  I++ PTRELA+Q+  V   +A      T  + +GG N R + + L
Sbjct: 293 LLYKPAKIA--STRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQML 350

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
            +  +I++ATPGR +DH++++  F  + +  LV+DEADR LE GF++E++EI+ +LP  R
Sbjct: 351 KSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNR 410

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR--LL 447
           Q +LFSAT  +K++ L  +S  +KP+ + ID  +  AT   L Q F  +      +  LL
Sbjct: 411 QNLLFSATMNSKIKSLVSLSL-KKPVRIMIDPPKKAAT--KLTQEFVRIRKRDHLKPALL 467

Query: 448 FTFLKR---NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
           F  +++     +K+I+VF++          ++  + + V +LHG   Q +R  +  +F  
Sbjct: 468 FNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKN 527

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFL 561
            E   L+CTD+A+RGLDIP ++ ++ YD P   + Y+HRVGRTAR   GR GR++ F+
Sbjct: 528 LEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARA--GREGRSVTFV 583

gb|EAL34571.1| GA21647-PA [Drosophila pseudoobscura]
(518 aa)

Score: 233 bits (595), Expect: 1.13555e-59
Length: 407, Idn/Pos/Gap = 145/229/21 (35%/56%/5%)

Query: 181 KSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARA 240
           +  PA     S+ A+  E  K +        +  L L++   +  +E+ +   ++IQ  A
Sbjct:  48 EDEPAASGSESDTAAPTEDQKLT--------WKDLGLNDTLCQACDELKWKAPSKIQREA  99

Query: 241 IPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFG 300
           IP+AL G+D++  A TGSGKT AF +PI+  L ++   P+    A+++ PTRELA QI  
Sbjct: 100 IPVALQGKDVIGLAETGSGKTGAFALPILHALLES---PQR-YFALVLTPTRELAFQIGE 155

Query: 301 VLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRF 360
               L S       +V+GG +   +  +L    +I++ATPGRL+DHL++ +GF  + +++
Sbjct: 156 QFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKY 215

Query: 361 LVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGID 420
           LV+DEADR L + FE E+ +IL++LP+ R+T LFSAT T KV+ L + S +     + ++
Sbjct: 216 LVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDP---VKVE 272

Query: 421 AEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYID 480
                 TVE LQQ +  +P + +   L   L        ++F S+CN     A +L  + 
Sbjct: 273 VSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 332

Query: 481 VPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEY 540
           +  + LHG+  Q+KR +   +F  +  + L+ TDVA+RGLDIP VD +V +D P   K+Y
Sbjct: 333 LAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDY 392

Query: 541 IHRVGRTARGVHGR-GRAILFLLPSEVGFLQ---HLRDAKVPLNEYE 583
           IHRVGRTAR   GR G+AI  +   ++   Q   HL   ++PL + E
Sbjct: 393 IHRVGRTARA--GRSGKAITIVSQYDIELYQRIEHLLGKQLPLYKCE 437

dbj|BAB10456.1| RNA helicase [Arabidopsis thaliana]
ref|NP_201168.1| DEAD box RNA helicase, putative [Arabidopsis thaliana]
(522 aa)

Score: 233 bits (595), Expect: 1.34178e-59
Length: 464, Idn/Pos/Gap = 160/255/29 (34%/54%/6%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           LT  RFD  PLS  +L+ I++ G+  MT +Q   +P+ L G+D+LA A+TG+GKT+AFL+
Sbjct:  51 LTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLL 110

Query: 267 PIVELLYKAK-WMPRNGTG---AIIIAPTRELAMQIFGVLHDLASHHHQTRA-IVMGGAN 321
           P +E++ K+    P N      A++I PTRELA Q     + L  +H      +V+GG  
Sbjct: 111 PSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTR 170

Query: 322 RRTEAEKL-INGTNILVATPGRLLDHLQSTRGFV--FEHLRFLVIDEADRCLEIGFEEEM 378
              E +++  N   ILVATPGRL DH+++T GF    + ++ LV+DEAD  L++GF +++
Sbjct: 171 LGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDI 230

Query: 379 HEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIV 438
             I+  +PK RQT LFSAT   +V  +  V+ ++    +    E  + T + ++Q   I 
Sbjct: 231 ERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIA 290

Query: 439 PSEQRFRLLFTFLKR----NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSK 494
             ++ F LL+T L+     N   K+IVF ++    K  A+LL  +++ V ++H ++ QS 
Sbjct: 291 SLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSY 350

Query: 495 RTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHG 553
           RT    EF + +   L+ +DV+ARG+D P V  ++Q   P + ++YIHR+GRT R G  G
Sbjct: 351 RTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEG 410

Query: 554 RGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPK---EKLADIQTQLEKLVEGNYYLQKSA 610
            G  IL L P E  FL  L+D  +P+ +   P    E +  +Q  L       +   ++ 
Sbjct: 411 EG--ILLLAPWEEYFLSSLKD--LPITKSPLPSIDPETVKKVQKAL------CHVEMRNK 460

Query: 611 RDGFRSYLQAYASHSM--KDVFNVHELDIAAVAKSFGFSAPPRI 652
              ++++L  Y S  M  +D   + EL     ++S G   PP I
Sbjct: 461 EAAYQAWLGYYNSQKMIGRDKDRLVEL-ANEFSRSMGLDNPPAI 503

gb|EAA53441.1| hypothetical protein MG07718.4 [Magnaporthe grisea 70-15]
ref|XP_367814.1| hypothetical protein MG07718.4 [Magnaporthe grisea 70-15]
(790 aa)

Score: 233 bits (593), Expect: 2.08801e-59
Length: 343, Idn/Pos/Gap = 137/208/9 (39%/60%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F S+ LS P LRG+  +GFA+ T IQ++ IP+AL G+D++  A TGSGKT AF++PI+E 
Sbjct: 257 FQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILER 316

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           LLY+ K +P   +  +I+APTRELA+Q   V   LASH      + +GG + + +  +L 
Sbjct: 317 LLYRPKKVPT--SRVVILAPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQESELR 374

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              ++++ATPGR +DH++++  F  + +  LV+DEADR LE GF +E++EIL  LPK+RQ
Sbjct: 375 LRPDVIIATPGRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQ 434

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIV---PSEQRFRLL 447
           TMLFSAT T+ V++L +V    KP+ L +D+++   TV  L Q F  +     E+R   L
Sbjct: 435 TMLFSATMTSSVDNLIRVGL-NKPVRLMVDSQK--KTVVTLTQEFVRLRPGREEKRMGYL 491

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
               K    +++I+F            +   + +   +LHG   Q +R  +   F   + 
Sbjct: 492 VYLCKNLYTERVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMSQIQRIQSVEAFRDGKV 551

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           + LL TD+A+RGLDI  VD ++ Y+ P   + Y+HRVGRTAR 
Sbjct: 552 SFLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARA 594

emb|CAG83933.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_500004.1| hypothetical protein [Yarrowia lipolytica]
(480 aa)

Score: 233 bits (593), Expect: 2.15888e-59
Length: 381, Idn/Pos/Gap = 144/213/18 (37%/55%/4%)

Query: 190 SSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGI----------EEMGFARMTEIQAR 239
           +++  +E+E+PK SS   T    D       T + +          EE+ F + T IQA+
Sbjct:  34 TTKSDNEEEEPKKSSKNYTSVEVDESEEQTKTFKDLGVIDSICETCEELKFTKPTPIQAQ  93

Query: 240 AIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIF 299
           +IP AL GRDI+  A+TGSGKT AF IP+++ LY+           +++APTRELA QI 
Sbjct:  94 SIPYALEGRDIIGLAQTGSGKTAAFAIPVLQSLYENP----QPLYCVVLAPTRELAYQIS 149

Query: 300 GVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLR 359
                L S      A+V+GG N  T+A  L    +++VATPGRL+DHL++T+GF    L+
Sbjct: 150 ETFEALGSAMGLRTAVVVGGMNMMTQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLK 209

Query: 360 FLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGI 419
           FLV+DEADR L++ F   + +IL+++P+ R T LFSAT T+KVE L + S    P+ + +
Sbjct: 210 FLVMDEADRLLDMEFGPSLDKILKVIPRQRNTYLFSATMTSKVEKLQRASLVD-PVRVAV 268

Query: 420 DAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI 479
             +    T + L Q     P + +   L   +  N    +I+F  + +  +  + LL  +
Sbjct: 269 STK--YQTADNLLQYMVFCPFKHKDTHLVYLVSENAGNSMIIFARTKSDTQRISLLLRNL 326

Query: 480 DVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKE 539
               + LHG   Q+ R     +F       L+ TDVA+RGLDIPAVD ++ YD P + K 
Sbjct: 327 GYGAIPLHGDLSQTARLGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIPSDSKS 386

Query: 540 YIHRVGRTAR-GVHGRGRAIL 559
           YIHRVGRTAR G  G+  A++
Sbjct: 387 YIHRVGRTARAGRAGKSVALV 407

gb|AAA34666.1| ATP-dependent RNA helicase
(722 aa)

Score: 232 bits (592), Expect: 2.6156e-59
Length: 358, Idn/Pos/Gap = 140/220/15 (39%/61%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F+SL LS P L+G+  +G+ + + IQ+  IP+AL G+DI+A A TGSGKT AF+IPI+E 
Sbjct: 203 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 262

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH-HHQTRAIVMGGANRRTEAEKL 329
           LLYK   +    T  I++ PTRELA+Q+  V   +A      T  + +GG N R + + L
Sbjct: 263 LLYKPAKIA--STRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQML 320

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
            +  +I++ATPGR +DH++++  F  + +  LV+DEADR LE GF++E++EI+ +LP  R
Sbjct: 321 KSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNR 380

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR--LL 447
           Q +LFSAT  +K++ L  +S  +KP+ + ID  +  AT   L Q F  +      +  LL
Sbjct: 381 QNLLFSATMNSKIKSLVSLSL-KKPVRIMIDPPKKAAT--KLTQEFVRIRKRDHLKPALL 437

Query: 448 FTFLKR---NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
           F  +++     +K+I+VF++          ++  + + V +LHG   Q +R  +  +F  
Sbjct: 438 FNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKN 497

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFL 561
            E   L+CTD+A+RGLDIP ++ ++ YD P   + Y+HRVGRTAR   GR GR++ F+
Sbjct: 498 LEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARA--GREGRSVTFV 553

gb|EAL42480.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
(376 aa)

Score: 232 bits (592), Expect: 3.01421e-59
Length: 363, Idn/Pos/Gap = 130/209/14 (35%/57%/3%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           L + TL  I+E GF++ TE+Q   IP  L  +D++  ++TGSGKTL+FLIP+ E++ + +
Sbjct:  12 LRKETLDTIKEFGFSKPTEVQKVVIPAFLDRKDVIVQSQTGSGKTLSFLIPLFEIIKRER  71

Query: 277 -WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNI 335
             + +     III+PTRELA QI+ +      H + T  ++ GG +  T  E++  G NI
Sbjct:  72 ESIEKKEVYGIIISPTRELAHQIYDIAKIFCKHFNMTIGLLTGGIDISTLEEEMKKGANI 131

Query: 336 LVATPGRLLDHLQSTRGFVFE--HLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTML 393
           +V T GR+ + +   + F  E  ++  L++DE DR +E+GF + M  I+  LPK R+T L
Sbjct: 132 VVGTAGRI-EEVIVNKLFELEWNNVEVLILDEGDRMIEMGFSQSMTRIICHLPKQRRTGL 190

Query: 394 FSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR 453
           FSAT   ++     ++  + P  + I  +  +  +  L   + IVP E + + L   LK 
Sbjct: 191 FSATMPKELNKFV-IAGCRNPYKIQISNDNTLTPIS-LANEYCIVPYEIKMQTLIRVLKE 248

Query: 454 NQRKKIIVFMSSCNGVKFYAELLNYI-------DVPVLDLHGKQKQSKRTSTFFEFARRE 506
           ++ KKI+VF+ +C+ V +   ++  +       +  +  +HGK KQ  R     +F    
Sbjct: 249 SKDKKIVVFVLTCDQVDYIYNIIKILHQEGYLKEKEIYSIHGKVKQVNRDKVIKKFEESC 308

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
            A L+CTDV ARG+D   +++I+QYDPP +PK YIHRVGRTAR +   G +++FL P E 
Sbjct: 309 EAILICTDVLARGMDFDNINYIIQYDPPQDPKTYIHRVGRTAR-MGSIGHSLIFLAPLEK 367

Query: 567 GFL 569
            F+
Sbjct: 368 SFI 370

emb|CAG87892.1| unnamed protein product [Debaryomyces hansenii CBS767]
ref|XP_459659.1| unnamed protein product [Debaryomyces hansenii]
(478 aa)

Score: 231 bits (589), Expect: 6.22918e-59
Length: 397, Idn/Pos/Gap = 144/216/14 (36%/54%/3%)

Query: 160 SSRATVHEMEPLARPCPEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTP------HRFD 213
           + ++  H  +  AR   E  +K++   Q+   E A E+   +    ++ P        F+
Sbjct:  11 NKKSKTHSKKLDARALAEKIKKNALKQQA-QEEPAKEENVAENFDTVVDPTAELKFKSFN  69

Query: 214 SLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLY 273
            L L    L  I++M F + T IQ+ AIP AL G+DI+  A+TGSGKT AF IPI++ L 
Sbjct:  70 ELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQAL- 128

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGT 333
              W  +     +++APTRELA QI      L S        ++GG +   +A  L+   
Sbjct: 129 ---WEAQAAYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKP 185

Query: 334 NILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTML 393
           +ILVATPGR++DHL+ T+GF  ++L++LV+DEADR L++ F   + +IL+I+P  R T L
Sbjct: 186 HILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKIIPTQRTTYL 245

Query: 394 FSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR 453
           FSAT T K+  L + S    P+ + +  +    T + L Q   +V    +   L   L  
Sbjct: 246 FSATMTNKIAKLQRASLHN-PVRVAVSNK--YQTADNLVQSMMLVSDGYKNTYLIHLLNE 302

Query: 454 NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCT 513
              K II+F  +C   +  A L   +    + LHG+  Q++R  +  +F   +   L+ T
Sbjct: 303 FLGKSIIIFTRTCAHSQRTALLARILGFSAVPLHGQLTQAQRLGSLNKFKAGKANILIAT 362

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           DVAARGLDIP+VD ++ YD P + K YIHRVGRTAR 
Sbjct: 363 DVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARA 399

emb|CAG98496.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_455788.1| unnamed protein product [Kluyveromyces lactis]
(748 aa)

Score: 231 bits (589), Expect: 6.71496e-59
Length: 358, Idn/Pos/Gap = 139/218/15 (38%/60%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F+SL LS P L+G+  +G+   + IQ+ AIP+AL G+DI+A A TGSGKT AF+IPI+E 
Sbjct: 235 FNSLSLSRPVLKGLGSLGYTSPSPIQSAAIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 294

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH-HHQTRAIVMGGANRRTEAEKL 329
           LLYK   +    T  +++ PTRELA+Q+  V  ++    +  T  + +GG N R + + L
Sbjct: 295 LLYKPAHIA--STRVVVLTPTRELAIQVADVGKNIGKFVNGLTFGLAVGGLNLRQQEQAL 352

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               +I++ATPGR +DHL+++  F  + +  LVIDEADR LE GF+EE+ EI+ ++P  R
Sbjct: 353 KTRPDIVIATPGRFIDHLRNSASFSVDSVEILVIDEADRMLEEGFQEELQEIMSLIPSKR 412

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR--LL 447
           QT+LFSAT  +K++ L  +S  +KP+ + ID   P    + L Q F  +      +  LL
Sbjct: 413 QTLLFSATMNSKIKQLISLSL-KKPVRIMIDP--PKQAADKLTQEFIRIRKRDHLKPALL 469

Query: 448 FTFLKR---NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
           +  +++     +K+I+VF++          +L  + + V +LHG   Q +R  +   F  
Sbjct: 470 YQLIRKLDNTSQKRIVVFVARKETAHKLRIVLGLLGMQVGELHGSLTQEQRLQSVNNFKS 529

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFL 561
            +   L+CTD+A+RGLDIP ++ ++ +D P   + Y+HRVGRTAR   GR GR++ F+
Sbjct: 530 LQVPVLICTDLASRGLDIPKIEVVINFDMPKTYEIYLHRVGRTARA--GREGRSVTFV 585

ref|NP_196478.2| DEAD box RNA helicase (RH26) [Arabidopsis thaliana]
(850 aa)

Score: 231 bits (588), Expect: 7.80314e-59
Length: 497, Idn/Pos/Gap = 163/265/34 (32%/53%/6%)

Query: 184 PALQSLSSEHASEQEQP-----KPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQA 238
           P ++  +S  A + ++P     K S   L+  RFD  PLS  +L+ I++ GF  MT +Q 
Sbjct: 351 PLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQE 410

Query: 239 RAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTG----AIIIAPTREL 294
             +P+ L G+D+LA A+TG+GKT+AFL+P +E + K+    R+        +++ PTREL
Sbjct: 411 ATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTREL 470

Query: 295 AMQIFGVLHDLASHHHQTRA-IVMGGANRRTEAEKL-INGTNILVATPGRLLDHLQSTRG 352
           A Q     + L  +H      +V+GG    TE  ++  N   ILVATPGRL DH+++T G
Sbjct: 471 ASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSG 530

Query: 353 FV--FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSF 410
           F      ++ LV+DEAD  L++GF  ++  I+  +PK RQT LFSAT   +V  +  V+ 
Sbjct: 531 FATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVAL 590

Query: 411 QQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR----NQRKKIIVFMSSC 466
           ++    +    E    T + + Q + I   ++ F LL   LK     N   K+I+F ++ 
Sbjct: 591 KRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTA 650

Query: 467 NGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVD 526
              +  A+LL+ + + V ++H ++ QS RT    EF + +   L+ +DV+ARG+D P V 
Sbjct: 651 MVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVS 710

Query: 527 WIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP 585
            +VQ   P + ++YIHR+GRT R G  G G  +L L P E  F+  ++D  +P+ +   P
Sbjct: 711 LVVQMGLPSDREQYIHRLGRTGRKGKEGEG--VLLLAPWEEYFMSSVKD--LPITKSPLP 766

Query: 586 ---KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSM--KDVFNVHELDIAAV 640
               E +  +Q  L ++        K+    ++++L  Y S  M  +D   + EL     
Sbjct: 767 PIDPEAVKRVQKGLSQVE------MKNKEAAYQAWLGYYKSQKMIARDTTRLVEL-ANEF 819

Query: 641 AKSFGFSAPPRICLDVL 657
           ++S G  +PP I  +VL
Sbjct: 820 SRSMGLDSPPAIPKNVL 836

dbj|BAB10010.1| RNA helicase-like protein [Arabidopsis thaliana]
(827 aa)

Score: 231 bits (588), Expect: 8.34178e-59
Length: 497, Idn/Pos/Gap = 163/265/34 (32%/53%/6%)

Query: 184 PALQSLSSEHASEQEQP-----KPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQA 238
           P ++  +S  A + ++P     K S   L+  RFD  PLS  +L+ I++ GF  MT +Q 
Sbjct: 328 PLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQE 387

Query: 239 RAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTG----AIIIAPTREL 294
             +P+ L G+D+LA A+TG+GKT+AFL+P +E + K+    R+        +++ PTREL
Sbjct: 388 ATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTREL 447

Query: 295 AMQIFGVLHDLASHHHQTRA-IVMGGANRRTEAEKL-INGTNILVATPGRLLDHLQSTRG 352
           A Q     + L  +H      +V+GG    TE  ++  N   ILVATPGRL DH+++T G
Sbjct: 448 ASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSG 507

Query: 353 FV--FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSF 410
           F      ++ LV+DEAD  L++GF  ++  I+  +PK RQT LFSAT   +V  +  V+ 
Sbjct: 508 FATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVAL 567

Query: 411 QQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR----NQRKKIIVFMSSC 466
           ++    +    E    T + + Q + I   ++ F LL   LK     N   K+I+F ++ 
Sbjct: 568 KRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTA 627

Query: 467 NGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVD 526
              +  A+LL+ + + V ++H ++ QS RT    EF + +   L+ +DV+ARG+D P V 
Sbjct: 628 MVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVS 687

Query: 527 WIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP 585
            +VQ   P + ++YIHR+GRT R G  G G  +L L P E  F+  ++D  +P+ +   P
Sbjct: 688 LVVQMGLPSDREQYIHRLGRTGRKGKEGEG--VLLLAPWEEYFMSSVKD--LPITKSPLP 743

Query: 586 ---KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSM--KDVFNVHELDIAAV 640
               E +  +Q  L ++        K+    ++++L  Y S  M  +D   + EL     
Sbjct: 744 PIDPEAVKRVQKGLSQVE------MKNKEAAYQAWLGYYKSQKMIARDTTRLVEL-ANEF 796

Query: 641 AKSFGFSAPPRICLDVL 657
           ++S G  +PP I  +VL
Sbjct: 797 SRSMGLDSPPAIPKNVL 813

emb|CAA18864.1| SPBC21H7.04 [Schizosaccharomyces pombe]
ref|NP_595929.1| probable atp-dependent rna helicase [Schizosaccharomyces pombe]
pir||T39930 probable atp-dependent rna helicase - fission yeast  (Schizosaccharomyces pombe)
(709 aa)

Score: 230 bits (587), Expect: 9.29749e-59
Length: 553, Idn/Pos/Gap = 181/274/98 (32%/49%/17%)

Query: 227 EMGFARMTEIQARAIPLALS--GRDILASARTGSGKTLAFLIPIVELLYKAKWMPRN--- 281
           +M  +  T IQ+  +P  L+   +D    A+TGSGKTLA+L+PIV+ L +   +P+N   
Sbjct: 156 KMNISAPTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIR---LPKNLHT 212

Query: 282 ---GTGAIIIAPTRELAMQIFGVLHDLASH---HHQTRAIVMGGANRRTEAEKLINGTNI 335
              G  A+I+APTREL  QI+ V + L ++   H      V+GG  +++E  ++  G NI
Sbjct: 213 RTSGIYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNI 272

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL---------- 385
           L+ TPGRL DHL++T       +R++V+DE DR +++GFEE + +IL  L          
Sbjct: 273 LIGTPGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKD 332

Query: 386 ---PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPV-----ATVEGLQQGFTI 437
              P  + TML SAT    V+ L+  + +   L+L     +          E L Q + +
Sbjct: 333 LSIPSRKVTMLCSATMKDTVKRLSDSALKDA-LYLKSSIVEETNDGYSQAPEQLLQRYVV 391

Query: 438 VPSEQRFRLLFTFLKRNQR--KKIIVFMSSCNGVKFYAELLN------------------ 477
           VP + R   L   L+ + R  KKII+F+S  + V F+ E                     
Sbjct: 392 VPPKLRLVSLVALLRSHVRSYKKIIIFLSCSDSVDFHFEAFRCAINADEMEEAVKEKPDS 451

Query: 478 ----YIDVPVL---------DLHGKQKQSKRTSTFFEFARREHA---TLLCTDVAARGLD 521
                 + P L          LHG   Q  RTST   F+  E +    LLCTDVAARGLD
Sbjct: 452 EGDIISNAPALRIDGKSNVYRLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLD 511

Query: 522 IPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNE 581
           +P VD +VQYD P    +Y+HR+GRTAR  H  G AI+FLLP E  ++  L+ + V  N 
Sbjct: 512 LPNVDLVVQYDAPFSTDDYLHRIGRTARAGHN-GAAIMFLLPKESEYINLLK-SSVSANI 569

Query: 582 YEFP---------------------KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQA 620
            E P                     +++  + Q +LE+ +  N  ++  A+  F SY++A
Sbjct: 570 LEQPNGPSGLLSAGFSQGKTNTNDWQDRATEWQLELERFILENEPMRNIAKRAFTSYVRA 629

Query: 621 YASH--SMKDVFNVHELDIAAVAKSFGF-SAPPRICLDVLERAKKIRRRGGGGGFGDEWK 677
           YA+H  S + +FN+ +L +  +AKSF    AP +I       + K R++GG    G    
Sbjct: 630 YATHLSSERSIFNMRDLHLGHIAKSFALREAPGKIS---GANSSKPRKQGGSVDKGKSKS 686

Query: 678 NRDRLKDLIRKRL 690
           ++D    + RK +
Sbjct: 687 SKDIAALMHRKAM 699

ref|XP_323857.1| hypothetical protein [Neurospora crassa]
gb|EAA27679.1| hypothetical protein [Neurospora crassa]
(515 aa)

Score: 230 bits (587), Expect: 9.61303e-59
Length: 450, Idn/Pos/Gap = 155/239/15 (34%/53%/3%)

Query: 176 PEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTE 235
           PE  ++S+PA  S   +  +    P+          F  L + +      E +G+   T 
Sbjct:  56 PEPAEESTPATNSTEEDSVTLDVAPEQEEVETVKKTFKDLGIVDALCEACERLGYKNPTP 115

Query: 236 IQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELA 295
           IQ ++IPLAL  RDI+  A TGSGKT AF +PI++ L   K  P     A+++APTRELA
Sbjct: 116 IQEQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLD-KPAP---LFALVLAPTRELA 171

Query: 296 MQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVF 355
            QI      L S      A+++GG +  T+A  L    +++VATPGRLLDHL+ T+GF  
Sbjct: 172 AQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSL 231

Query: 356 EHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPL 415
             +++LV+DEADR L++ F   + +IL+ LP+ R+T LFSAT ++KVE L + S +  PL
Sbjct: 232 RSMQYLVMDEADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRD-PL 290

Query: 416 HLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAEL 475
            + + + +  ATV  L+  +  +P   +   L         + II+F  +    +  A L
Sbjct: 291 KVSVSSNK-YATVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAIL 349

Query: 476 LNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPD 535
           L  + +  + LHG   QS R     +F       L+ TDVAARGLDIP VD ++ +D P 
Sbjct: 350 LRTLGMGAIPLHGGLSQSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQ 409

Query: 536 EPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQT 594
           + K Y+HRVGRTAR G  G   +I+     E+ +L+        L+EY   K+++   + 
Sbjct: 410 DSKTYVHRVGRTARAGKSGHAISIVTQYDLEI-WLRIEAALGHKLDEYPLEKDEVMVFKP 468

Query: 595 QLEKLVEGNYYLQKSARDGFRSYLQAYASH 624
           ++E+        Q+ AR+  +S ++    H
Sbjct: 469 RVEE-------AQRHARNEMKSLMENQGKH 491

gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
(456 aa)

Score: 230 bits (587), Expect: 1.1454e-58
Length: 403, Idn/Pos/Gap = 146/227/22 (36%/56%/5%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L + E  ++  E +G+   ++IQA A+P AL G+D++  A+TGSGKT AF IPI++ 
Sbjct:  11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA  70

Query: 272 L--YKAKWMPRNGTG------AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
           L  Y     P+ G        A +++PTRELA+QI      L +      A++ GG +R 
Sbjct:  71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLFGGIDRM 130

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
            +   L    +++VATPGRL DH+  T+GF  + L++LV+DEADR L   FE+ +++IL 
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
            +P+ R+T LFSAT T KV  L +   +     + I+A    +TV+ L+Q +  V ++ +
Sbjct: 191 EIPRERKTFLFSATMTKKVRKLQRACLRNP---VKIEAASKYSTVDTLKQQYRFVAAKYK 247

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
              L   L        ++F  +C+G +F A +L  +    + + G+  QSKR     +F 
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFK 307

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLL 562
             E   L+CTDVA+RGLDIP+VD ++ YD P   K+YIHRVGRTAR   GR G  I  + 
Sbjct: 308 AGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARA--GRSGVGISLVN 365

Query: 563 PSEVGF---LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEG 602
             E+ +   ++ L   K+P    E+P E+  ++ + LE++ E 
Sbjct: 366 QYELEWYIQIEKLIGKKLP----EYPAEE-DEVLSLLERVAEA 403

gb|EAL00420.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
(399 aa)

Score: 230 bits (586), Expect: 1.34217e-58
Length: 375, Idn/Pos/Gap = 141/215/14 (37%/57%/3%)

Query: 228 MGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAII 287
           M F + T IQ+ AIP AL G+DI+  A+TGSGKT AF IPI++ L    W  +    A++
Sbjct:   1 MKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSL----WHAQQPYFALV  56

Query: 288 IAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHL 347
           +APTRELA QI      L S      + ++GG +   +A  L+   +++VATPGR++DHL
Sbjct:  57 LAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHL 116

Query: 348 QSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAK 407
           + T+GF  ++L++LV+DEADR L++ F   + +IL+++P  R T LFSAT T K+E L +
Sbjct: 117 EHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQR 176

Query: 408 VSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCN 467
            S    P+ + + ++    T + L Q   +V    +  +L   L     K IIVF  +  
Sbjct: 177 ASLHN-PVRVAVSSK--YQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVA 233

Query: 468 GVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDW 527
             +  A L   +    + LHG+  QS+R  +  +F   +   L+ TDVAARGLDIP+VD 
Sbjct: 234 HAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDV 293

Query: 528 IVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGF---LQHLRDAKVPLNEYE 583
           ++ YD P + K YIHRVGRTAR   GR G++I  +   ++     ++ +   K+P  E +
Sbjct: 294 VINYDIPTDSKAYIHRVGRTARA--GRSGKSISLITQYDLEMYLRIESVLGKKLP-KEDK 350

Query: 584 FPKEKLADIQTQLEK 598
            PKE L  +   ++K
Sbjct: 351 PPKEVLDALHVHVDK 365

ref|NP_610090.1| CG9253-PA [Drosophila melanogaster]
gb|AAF53963.1| CG9253-PA [Drosophila melanogaster]
(507 aa)

Score: 230 bits (586), Expect: 1.37619e-58
Length: 394, Idn/Pos/Gap = 142/220/13 (36%/55%/3%)

Query: 180 QKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQAR 239
            K   +  +LS E     E        LT   +  L L+E   +  +E+ +   ++IQ  
Sbjct:  34 HKEGDSEAALSGEDDKGSEDDAAEEQKLT---WKDLGLNEALCQACDELKWKAPSKIQRE  90

Query: 240 AIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIF 299
           AIP+AL G+D++  A TGSGKT AF +PI+  L +    P+    A+++ PTRELA QI 
Sbjct:  91 AIPVALQGKDVIGLAETGSGKTGAFALPILHALLEN---PQR-YFALVLTPTRELAFQIG 146

Query: 300 GVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLR 359
                L S       +V+GG +   +  +L    +I++ATPGRL+DHL++ +GF  + ++
Sbjct: 147 EQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIK 206

Query: 360 FLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGI 419
           +LV+DEADR L + FE E+ +IL++LP+ R+T LFSAT T KV+ L + S +     + +
Sbjct: 207 YLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDP---VKV 263

Query: 420 DAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI 479
           +      TVE LQQ +  +P + +   L   L        ++F S+CN     A +L  +
Sbjct: 264 EVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRAL 323

Query: 480 DVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKE 539
            +  + LHG+  Q+KR +   +F  +  + L+ TDVA+RGLDIP VD +V +D P   K+
Sbjct: 324 GLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKD 383

Query: 540 YIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL 572
           YIHRVGRTAR   GR G+AI  +   ++   Q +
Sbjct: 384 YIHRVGRTARA--GRSGKAITLVSQYDIELYQRI 415

gb|AAM52004.1| RE27528p [Drosophila melanogaster]
(507 aa)

Score: 230 bits (586), Expect: 1.42289e-58
Length: 394, Idn/Pos/Gap = 142/220/13 (36%/55%/3%)

Query: 180 QKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQAR 239
            K   +  +LS E     E        LT   +  L L+E   +  +E+ +   ++IQ  
Sbjct:  34 HKEGDSEAALSGEDDKGSEDDAAEEQKLT---WKDLGLNEALCQACDELKWKAPSKIQRE  90

Query: 240 AIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIF 299
           AIP+AL G+D++  A TGSGKT AF +PI+  L +    P+    A+++ PTRELA QI 
Sbjct:  91 AIPVALQGKDVIGLAETGSGKTGAFALPILHALLEN---PQR-YFALVLTPTRELAFQIG 146

Query: 300 GVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLR 359
                L S       +V+GG +   +  +L    +I++ATPGRL+DHL++ +GF  + ++
Sbjct: 147 EQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIK 206

Query: 360 FLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGI 419
           +LV+DEADR L + FE E+ +IL++LP+ R+T LFSAT T KV+ L + S +     + +
Sbjct: 207 YLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDP---VKV 263

Query: 420 DAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI 479
           +      TVE LQQ +  +P + +   L   L        ++F S+CN     A +L  +
Sbjct: 264 EVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRAL 323

Query: 480 DVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKE 539
            +  + LHG+  Q+KR +   +F  +  + L+ TDVA+RGLDIP VD +V +D P   K+
Sbjct: 324 GLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKD 383

Query: 540 YIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL 572
           YIHRVGRTAR   GR G+AI  +   ++   Q +
Sbjct: 384 YIHRVGRTARA--GRSGKAITLVSQYDIELYQRI 415

dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
(456 aa)

Score: 229 bits (585), Expect: 1.79735e-58
Length: 403, Idn/Pos/Gap = 146/227/22 (36%/56%/5%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L + E  ++  E +G+   ++IQA A+P AL G+D++  A+TGSGKT AF IPI++ 
Sbjct:  11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA  70

Query: 272 L--YKAKWMPRNGTG------AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
           L  Y     P+ G        A +++PTRELA+QI      L +      A+++GG +R 
Sbjct:  71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
            +   L    +++VATPGRL DH+  T+GF  + L++LV+DEADR L   FE+ +++IL 
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
            +P  R+T LFSAT T KV  L +   +     + I+A    +TV+ L+Q +  V ++ +
Sbjct: 191 EIPLERETFLFSATMTKKVRKLQRACLRNP---VKIEAASKYSTVDTLKQQYRFVAAKYK 247

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
              L   L        ++F  +C+G +F A +L  +    + + G+  QSKR     +F 
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFK 307

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLL 562
             E   L+CTDVA+RGLDIP+VD ++ YD P   K+YIHRVGRTAR   GR G  I  + 
Sbjct: 308 AGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARA--GRSGVGISLVN 365

Query: 563 PSEVGF---LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEG 602
             E+ +   ++ L   K+P    E+P E+  ++ + LE++ E 
Sbjct: 366 QYELEWYIQIEKLIGKKLP----EYPAEE-DEVLSLLERVAEA 403

dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
ref|NP_568931.1| DEAD/DEAH box helicase, putative (RH10) [Arabidopsis thaliana]
(456 aa)

Score: 229 bits (585), Expect: 1.88963e-58
Length: 403, Idn/Pos/Gap = 146/227/22 (36%/56%/5%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L + E  ++  E +G+   ++IQA A+P AL G+D++  A+TGSGKT AF IPI++ 
Sbjct:  11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA  70

Query: 272 L--YKAKWMPRNGTG------AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
           L  Y     P+ G        A +++PTRELA+QI      L +      A+++GG +R 
Sbjct:  71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
            +   L    +++VATPGRL DH+  T+GF  + L++LV+DEADR L   FE+ +++IL 
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
            +P  R+T LFSAT T KV  L +   +     + I+A    +TV+ L+Q +  V ++ +
Sbjct: 191 EIPLERKTFLFSATMTKKVRKLQRACLRNP---VKIEAASKYSTVDTLKQQYRFVAAKYK 247

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
              L   L        ++F  +C+G +F A +L  +    + + G+  QSKR     +F 
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFK 307

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLL 562
             E   L+CTDVA+RGLDIP+VD ++ YD P   K+YIHRVGRTAR   GR G  I  + 
Sbjct: 308 AGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARA--GRSGVGISLVN 365

Query: 563 PSEVGF---LQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEG 602
             E+ +   ++ L   K+P    E+P E+  ++ + LE++ E 
Sbjct: 366 QYELEWYIQIEKLIGKKLP----EYPAEE-DEVLSLLERVAEA 403

gb|EAL67300.1| hypothetical protein DDB0206406 [Dictyostelium discoideum]
(546 aa)

Score: 229 bits (584), Expect: 2.08862e-58
Length: 361, Idn/Pos/Gap = 132/206/8 (36%/57%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+SL +    +    ++GF +  EIQ  +IP AL GRDI+  A+TGSGKT AF+IP+++ 
Sbjct: 121 FESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQK 180

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +A      G   + +APTRELA QI    + + S       +++GG +  +++  L  
Sbjct: 181 LLEAP----QGLFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLALAK 236

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +++V +PGR+L HL+ T+GF    +++ ++DEADR     FEEE++ IL+++PK R T
Sbjct: 237 KPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEADRLFSADFEEEVNNILKVIPKERNT 296

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT T+KV  L + S    P+ + + ++    TV+ L Q +  VP + +   L   L
Sbjct: 297 YLFSATMTSKVAKLQRASLVN-PVKVQVASK--YQTVDTLLQQYLFVPFKYKDCYLAYIL 353

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                   I+F S+C      A +L  +    + ++G   Q KR ++  +F +   + L+
Sbjct: 354 NELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSILV 413

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TDVAARGLDIP+VD ++ YD P   KEY+HRVGRTAR  +  GRAI  +   +V   Q 
Sbjct: 414 ATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNS-GRAITIVTQYDVEMYQR 472

Query: 572 L 572
           +
Sbjct: 473 I 473

gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
ref|XP_402829.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
(551 aa)

Score: 229 bits (583), Expect: 2.72782e-58
Length: 375, Idn/Pos/Gap = 146/211/11 (38%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L +    +     MGF   T IQ +AIP AL  RD++  A+TGSGKT AF IPI++ 
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L    W       A ++APTRELA QI   +  L S      A ++GG +  +++  L  
Sbjct: 166 L----WDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSK 221

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +++VATPGRL DHL++T+GF    L++LV+DEADR L++ F   + ++L+ +P+ R+T
Sbjct: 222 RPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRT 281

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           MLFSAT TTKV  L + S +  P+ + +D +    TV  L+Q +  +P   +   L    
Sbjct: 282 MLFSATMTTKVAKLQRASLKN-PVRVEVDTK--YTTVSTLKQHYMFMPFAHKDTYLVHLA 338

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                  IIVF  + +  +  + LL  +  P + LHG+  Q  R     +F     + L+
Sbjct: 339 NEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFKTGGRSILV 398

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQ 570
            TDVA+RGLDIPAVD +V YD P   K+YIHRVGRTAR   GR GR++  +   +V  LQ
Sbjct: 399 ATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARA--GRSGRSVTLVTQYDVELLQ 456

Query: 571 HLRDAKVPLNEYEFP 585
            + +A + L   EFP
Sbjct: 457 RI-EAVIGLKMTEFP 470

gb|AAP44655.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
ref|XP_469209.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
gb|AAU89137.1| DEAD/DEAH box helicase domain containing protein [Oryza sativa (japonica cultivar-group)]
(472 aa)

Score: 228 bits (582), Expect: 3.56265e-58
Length: 420, Idn/Pos/Gap = 144/220/15 (34%/52%/3%)

Query: 196 EQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASAR 255
           EQE   P+     P  F  L +    +   + MG+   T IQA AIP AL GRD++   +
Sbjct:  30 EQEAEPPAR---RPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQ  86

Query: 256 TGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI 315
           TGSGKT AF +PI++ L K          A +++PTRELA QI      L S    +  +
Sbjct:  87 TGSGKTGAFALPIIQALLKQD--KPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTV 144

Query: 316 VMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFE 375
           ++GG +R  +A  L    +I+V TPGRLLDHL  T+GF    L++LV+DEAD+ L + F+
Sbjct: 145 LVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQ 204

Query: 376 EEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGF 435
           + + +IL ++PK R+T LFSAT T KV  L +   +     + ++     +TV+ L+Q F
Sbjct: 205 KALDDILNVIPKERRTFLFSATMTNKVSKLQRACLRNP---VKVEVASKYSTVDTLRQEF 261

Query: 436 TIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKR 495
             VP++ +   L   L       I++F+ +C   +  A  L  +    + + G+  Q KR
Sbjct: 262 YFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKR 321

Query: 496 TSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRG 555
                 F  ++   L+CTDVA+RGLDI  VD ++ YD P   K+Y+HRVGRTAR     G
Sbjct: 322 LGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARA-GNTG 380

Query: 556 RAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKL--ADIQTQLEKLVEGNYYLQKSARDG 613
            A+  +   E  + + +      L  YE P  K+  A+I    E++ +       + ++G
Sbjct: 381 YAVSLVNQYEAMWFKMIEK----LLGYEIPDRKVDNAEIMILRERISDSKRIALTTMKEG 436

dbj|BAB85021.1| unnamed protein product [Homo sapiens]
(353 aa)

Score: 228 bits (582), Expect: 3.90511e-58
Length: 335, Idn/Pos/Gap = 135/201/17 (40%/60%/5%)

Query: 215 LPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLY 273
           +PL    L  + E+GF  MT +Q+  IPL +  +D+ A A TGSGKTLAF+IPI+E LL 
Sbjct:  14 VPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLR  73

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV-MGGANRRTEAEKLI-N 331
           + + + ++  GAIII PTRELA+QI  VL     H  +   I+ +GG N   + E+    
Sbjct:  74 REEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQ 133

Query: 332 GTNILVATPGRLLDHL-QSTRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           G NI+VATPGRL D   +   G         L  LV+DEADR L++GFE  ++ IL  LP
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLP 193

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSE 441
           K R+T LFSAT+T +VE+L +   +  P+ +     G+ A     T   L+  + +  ++
Sbjct: 194 KQRRTGLFSATRTQEVENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYYMVCEAD 252

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTF 499
           ++F  L  FL+ ++++K +VF S+C  V++Y + L  +   V ++ +HGK K + R   F
Sbjct: 253 EKFNQLVHFLRSHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYT-RNKIF 311

Query: 500 FEFARREHATLLCTDVAARGLDIPAVDWIVQYDPP 534
            EF + +   L+CTDV ARG+DIP V+W++QYDPP
Sbjct: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPP 346

gb|EAL66617.1| hypothetical protein DDB0204625 [Dictyostelium discoideum]
(783 aa)

Score: 228 bits (582), Expect: 4.20965e-58
Length: 350, Idn/Pos/Gap = 141/214/13 (40%/61%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F+ L LS P L+ ++++GF++ T IQA+AIPLAL+G+DILASA TGSGKT AFL+P++E 
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           LL++           +I+ PTRELA+Q   V+ +LA   + T  +++GG + + +  +L 
Sbjct: 252 LLFRDS--EYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELR 309

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              ++++ATPGRL+DHL +  G   + L  L++DEADR L++GF++E+++I+   P  RQ
Sbjct: 310 KSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQ 369

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ---RFRLL 447
           TMLFSAT   +V+ LAK+S QQ P+ + +DA   V +   L+Q F  +  +    R  +L
Sbjct: 370 TMLFSATLNDEVKTLAKLSLQQ-PIRVQVDALMQVTST--LEQEFVKIKPQHLSDRPAIL 426

Query: 448 FTFLKR--NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARR 505
            +   R  NQ   II F  S   V     +    D+   +LHG   Q +R  +  +F   
Sbjct: 427 LSLCTRVFNQGGTII-FCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDG 485

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGR 554
           +   LL +DVA+RGLDI  V  ++ Y+ P+    YIHRVGRTAR G+ G+
Sbjct: 486 QVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGK 535

emb|CAG61137.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_448186.1| unnamed protein product [Candida glabrata]
(493 aa)

Score: 228 bits (581), Expect: 4.93281e-58
Length: 340, Idn/Pos/Gap = 136/195/8 (40%/57%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L    ++  + + F + T IQARAIP AL+G D++  A+TGSGKT AF IPI+  
Sbjct:  75 FAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILNK 134

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L    W  +    A ++APTRELA QI      L S        ++GG N   +A  L+ 
Sbjct: 135 L----WEDQQPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMR 190

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQ 390
             +I++ATPGRL+DHL++T+GF  ++L+FLV+DEADR L++ F   +  IL+I+P K R 
Sbjct: 191 KPHIIIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGPVLDRILKIIPTKGRT 250

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T LFSAT T+K++ L + S    P+   +  +    TV+ L Q   +VP   +   L   
Sbjct: 251 TYLFSATMTSKIDKLQRASLTN-PVKCAVSNK--YQTVDTLVQTLMVVPGGLKNTFLIYL 307

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     K +I+F  +    +  + L N ++     LHG   Q++RT     F   + + L
Sbjct: 308 LNEFIGKTVIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSIL 367

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           + TDVAARGLDIP+VD ++ YD P + K YIHRVGRTAR 
Sbjct: 368 VATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARA 407

emb|CAG81377.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_503177.1| hypothetical protein [Yarrowia lipolytica]
(799 aa)

Score: 227 bits (578), Expect: 1.17477e-57
Length: 555, Idn/Pos/Gap = 184/275/80 (33%/49%/14%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIP-LALSGRDILASARTGSGKTLAFLIPIVE 270
           F  L  S+  +  +  M  A+ T+IQ   IP L    RD+   A+TGSGKTLAF++P++E
Sbjct: 235 FSGLGCSQRLVDALVGMQLAKPTKIQRATIPRLIQRERDLFVQAQTGSGKTLAFVLPVLE 294

Query: 271 LLYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDLASHHHQ--TRAIVMGGANRRTEAE 327
            +     + R  G  A+I+ PTREL  QI+ VL  L           IV+GG  +++E  
Sbjct: 295 RIMSCDDVSRETGLFAVILTPTRELTTQIYSVLETLCRKACPWIVPGIVIGGEKKKSEKA 354

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI--- 384
           ++  G NILVATPGRL DH  +T       +R++V+DE DR +E+GFEE + +ILR    
Sbjct: 355 RIRKGVNILVATPGRLADHFDNTEALDLSQVRWVVLDEGDRLMELGFEETITKILRTIEW 414

Query: 385 -------------------LPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPV 425
                              LP  R T+L SAT    V +L K + +          E  +
Sbjct: 415 KSVLRGENYLKDIPKNLKPLPSRRVTVLCSATMKGGVTELGKSTLKDADWVSNDSVEDAL 474

Query: 426 A--TVEG------LQQGFTIVPSEQRFRLLFTFLK-------RNQRKKIIVFMSSCNGVK 470
           A  +VE       L Q + +VP++ R   L   L+            K+IVF+S  + V 
Sbjct: 475 AETSVETFSAPSQLVQEWVVVPAKLRLVTLLGALRGDILQSSEKTNTKVIVFLSCSDSVD 534

Query: 471 FYAE--------------------LLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT- 509
           F+ +                    LL+ +   V  LHG   Q  RT+T   FA+    + 
Sbjct: 535 FHFDVLSRDGSQINKMDTAKTAPLLLDDVSTSVYKLHGSLSQQARTATLASFAKNSTPSI 594

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLP-SEVGF 568
           LLCTDVA+RGLD+P +  +++YDPP   ++++HRVGRTAR     GRA+LFLLP +E G+
Sbjct: 595 LLCTDVASRGLDLPKITHVIEYDPPFSIEDHLHRVGRTARAGQD-GRALLFLLPGAEEGY 653

Query: 569 LQHLRDA-KVPLNEYE------FPKE----KLADIQTQLEKLVEGNYYLQKSARDGFRSY 617
           ++ L+ + ++    YE      F  +       +    +E+ V G+      AR GF S+
Sbjct: 654 VEKLKQSQQMKKTTYENILAAGFGGKGWDFAATNYHLDVERWVLGDETALDRARRGFTSH 713

Query: 618 LQAYASH--SMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDE 675
           ++AYA+H  + KD+FNV  L +  +AKSF     P   L   +  +KI+    G    DE
Sbjct: 714 IRAYATHIAAEKDMFNVRMLHLGHLAKSFALREAPGK-LGKKKDPEKIKVNKDGS--LDE 770

Query: 676 WKNRDRLKDLIRKRL 690
            + R ++ D  RK +
Sbjct: 771 TQARKKMLDRSRKHV 785

gb|EAL21316.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW43165.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_570472.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
(808 aa)

Score: 226 bits (577), Expect: 1.45938e-57
Length: 404, Idn/Pos/Gap = 154/221/17 (38%/54%/4%)

Query: 209 PHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI 268
           P  F ++ LS P LR +  + F   T IQARAIPLAL GRDIL SA TGSGKT AF++PI
Sbjct: 221 PSSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPI 280

Query: 269 VE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHH--HQTRAIVMGGANRRTE 325
           +E L Y+ +         +++ PTRELA+Q   V   LA         A+++GG +   +
Sbjct: 281 LERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQ 340

Query: 326 AEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
           A  L    +IL+ATPGRL+DHL +T  F    L  LVIDEADR LE GF +E+ EI++  
Sbjct: 341 AHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKAC 400

Query: 386 PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPS-EQRF 444
           P++RQTMLFSAT T  V++L K+S   KP+ + +D ++   T  GL Q F  + S + R 
Sbjct: 401 PRSRQTMLFSATMTDSVDELVKLSL-DKPIRVFVDPKR--NTARGLTQEFVRIRSDDSRS 457

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             L    KR  R+K I+F  S         +     +   +LHG   Q +R     +F  
Sbjct: 458 PSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFGLKAAELHGNLTQEQRLQALNDFKA 517

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
                LL TD+A+RGLDI  V+ ++ YD P +  +Y HRVGRTAR    +GR++  +  +
Sbjct: 518 GTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYTHRVGRTARAGR-KGRSVSLVGEA 576

Query: 565 EVGFLQ---------HLRDAKVPLNEYEFPKEKLADIQTQLEKL 599
           +   L+          +R   +P       KEKL + +  ++++
Sbjct: 577 DRKMLKAAIKQAEADQVRHRIIPSEAVTAMKEKLEEFKDDIQEI 620

emb|CAD25788.1| ATP-DEPENDENT RNA HELICASE (DEAD box family) [Encephalitozoon cuniculi GB-M1]
ref|NP_586184.1| ATP-DEPENDENT RNA HELICASE (DEAD box family) [Encephalitozoon cuniculi GB-M1]
(463 aa)

Score: 225 bits (574), Expect: 2.96605e-57
Length: 432, Idn/Pos/Gap = 147/239/30 (34%/55%/6%)

Query: 225 IEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTG 284
           IEE GF +MTE+Q + IP  L G+D++  + TG+GKT+AFL PI+  +Y  K   R G  
Sbjct:  19 IEENGFGKMTEVQLKCIPEVLKGKDVVVQSPTGTGKTMAFLAPILSCIYDGKGRGRPGVT  78

Query: 285 AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLL 344
           A++I PTRELA+QI     ++A          +GG +   + +++    +I V TPGRLL
Sbjct:  79 AVVITPTRELALQI----REVAGLFDVKCECFIGGMSIEEDYKRMKEEFSIAVGTPGRLL 134

Query: 345 DHL-QSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVE 403
           + + + T+   F  L  LV+DEAD+ L  GFEE++ ++L  LP+ R T LFSAT+   V+
Sbjct: 135 EIVGKETKK--FSSLSHLVLDEADKLLGFGFEEKLMQLLAKLPRNRVTGLFSATRNDSVD 192

Query: 404 DLAKVSFQQKPLHLGI-DAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVF 462
            L++V F + P+ + + + E PVA      +   + P E+   L+     R    + IVF
Sbjct: 193 KLSRV-FLRNPVSINVGNNEMPVAL-----EYIVVSPMEKLLVLMDIVTGR----RCIVF 242

Query: 463 MSSCNGVKFYAELLNYIDV-PVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLD 521
            ++C+ V F++ L++      +  +HGK  Q +R   + EF +R+   L CTDVAARG+D
Sbjct: 243 FATCSEVDFFSGLVSRAGFGNICKIHGKISQDERNRVYEEFFQRD-GLLFCTDVAARGID 301

Query: 522 IPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNE 581
              VD +V +D P E    +HR GRTAR    +G ++LF++P+E  +++ L+   +P  E
Sbjct: 302 FRGVDLVVHFDVPKEYSSIVHRSGRTARN-GSKGESVLFVMPNERAYVEFLKLKGIPAVE 360

Query: 582 YEFP-KEKLA--DIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIA 638
             +  K  L+  DI++ +   + G       +   F SY+++Y  H +  + +   LD  
Sbjct: 361 SSYRMKSSLSYQDIKSMISPELLG------LSVKAFVSYIRSYKEHFVSYILDYKGLDFD 414

Query: 639 AVAKSFGFSAPP 650
           ++A+ F     P
Sbjct: 415 SLAELFFLERIP 426

dbj|BAB14644.1| unnamed protein product [Homo sapiens]
(556 aa)

Score: 225 bits (574), Expect: 3.62365e-57
Length: 472, Idn/Pos/Gap = 160/234/87 (33%/49%/18%)

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLING 332
           ++K    +G  A+++ PTRELA+Q F  +  L          ++MGG  R++E  +L  G
Sbjct:   2 ESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKG  61

Query: 333 TNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTR 389
            NIL++TPGRL+DH++ST+   F  LR+LV DEADR L++GFE+++  IL  +    + R
Sbjct:  62 INILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKR 121

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGI------------------------DAEQPV 425
           Q +L SAT T  V  LA +S    P+ + +                        D     
Sbjct: 122 QNVLLSATLTEGVTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSF 180

Query: 426 ATVEGLQQGFTIVPSEQRFRLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELL----- 476
           A  E L+Q  T+VPS+ R   L  F+    K  + +K++VF SSC  V+F+  L      
Sbjct: 181 AIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLL 240

Query: 477 -------------NYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIP 523
                          + +  L LHG  +Q +RT+ F EF+      LLCTDVAARGLD+P
Sbjct: 241 SSSGAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLP 300

Query: 524 AVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEY 582
            V WIVQY+ P  P EYIHR+GRTAR G H  G ++L L PSE  ++  L   K+ ++E 
Sbjct: 301 QVTWIVQYNAPSSPAEYIHRIGRTARIGCH--GSSLLILAPSEAEYVNSLASHKINVSEI 358

Query: 583 EFP------------------------------KEKLADIQTQLEKLVEGNYYLQKSARD 612
           +                                +E+   +QT  E  V  +      A+ 
Sbjct: 359 KMEDILCVLTRDDCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKK 418

Query: 613 GFRSYLQAYASH--SMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKK 662
             +S++QAYA++   +K +F+V  L +  VAKSFG    PR  L  L R K+
Sbjct: 419 ALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPR-NLSALTRKKR 469

ref|XP_322321.1| hypothetical protein [Neurospora crassa]
gb|EAA28470.1| hypothetical protein [Neurospora crassa]
(1880 aa)

Score: 224 bits (571), Expect: 6.71886e-57
Length: 358, Idn/Pos/Gap = 135/209/10 (37%/58%/2%)

Query: 196 EQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASAR 255
           E+ QPK    + +   F  + LS P LRG+  +GF + T IQA+ IP++L G+D++  A 
Sbjct: 282 EENQPKKKGEMSS---FQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAV 338

Query: 256 TGSGKTLAFLIPIVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRA 314
           TGSGKT AF++PI+E LLY+ K +P   T  +I+ PTRELA+Q   V   LASH      
Sbjct: 339 TGSGKTAAFVVPILERLLYRPKKVPT--TRVVILTPTRELAIQCHAVAVKLASHTDIKFC 396

Query: 315 IVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGF 374
           + +GG + + +  +L    ++++ATPGR +DH++++  F  + +  LV+DEADR LE GF
Sbjct: 397 LAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGF 456

Query: 375 EEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQG 434
            +E++EIL  LPK+RQTMLFSAT T+ V+ L +     KP+ +  D+++  A    +Q+ 
Sbjct: 457 ADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGL-NKPVRIMADSQKKTAGTL-VQEF 514

Query: 435 FTIVPSEQRFR--LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQ 492
             + P  +  R   L    K    +++I+F            +     +   +LHG   Q
Sbjct: 515 VRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQ 574

Query: 493 SKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           ++R  +  +F   +   LL TD+A+RGLDI  VD ++ Y+ P  P+ Y+HRVGRTAR 
Sbjct: 575 AQRIQSVEDFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARA 632

gb|EAL38406.1| DEAD box protein [Cryptosporidium hominis]
(441 aa)

Score: 224 bits (571), Expect: 7.12297e-57
Length: 373, Idn/Pos/Gap = 139/210/11 (37%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL + +      E +G+   TEIQ + IP+AL GRDI+  A TGSGKT +F+IPI++ 
Sbjct:  30 FASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQR  89

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L   + +P     A+I+APTREL +QI        S      A ++GG +   ++  L  
Sbjct:  90 LLDDQ-VPMY---AVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLSLAK 145

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+VA+PGRL+DHL++T+GF    ++FLV+DEADR L + FE  +++I+   PK R T
Sbjct: 146 KPHIIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVESSPKNRTT 205

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT TTKV  L K+S    P+ + ++ +   A    L Q +  +P + ++      L
Sbjct: 206 YLFSATMTTKVAKLQKISLSN-PIKICVNTKYDTAA--NLMQYYMFIPFKYKWSYFIGLL 262

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           +   +   I+F ++C   +    L   +    + LHG+  QS+R S    F  ++   L 
Sbjct: 263 QNLGQYTGIIFCNTCINCRRGDLLAKELGFNSISLHGRMSQSQRLSALNLFKGKQKRLLF 322

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQ 570
            T+V +RGLDIP VD+++ +D P   K+Y+HRVGRTAR   GR GRAI  +   +V   Q
Sbjct: 323 TTEVGSRGLDIPHVDFVINFDIPTSSKDYVHRVGRTARA--GRSGRAISMVTQYDVETFQ 380

Query: 571 HLRDA-KVPLNEY 582
            +  A    L+EY
Sbjct: 381 RIEFALNKKLDEY 393

dbj|BAD54190.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
dbj|BAD46119.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
(562 aa)

Score: 224 bits (571), Expect: 7.30352e-57
Length: 499, Idn/Pos/Gap = 160/266/29 (32%/53%/5%)

Query: 177 EVTQKSSPALQSLSSEHASEQE--QPKPSSG---LLTPHRFDSLPLSEPTLRGIEEMGFA 231
           E   K+S   +S+  E   ++     + S G    L+  RFD   LS  TL+G++  G+ 
Sbjct:  41 ESPAKNSAPFESIKGEPIDQEGVVHTRESGGGDSYLSQTRFDECSLSPLTLKGVKAAGYE 100

Query: 232 RMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWM----PRNGTGAII 287
           RMT +Q   +P+ L G+D+LA A+TG+GKT+AFL+P +E++ K   +     R     ++
Sbjct: 101 RMTAVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVV 160

Query: 288 IAPTRELAMQIFGVLHDLASHHHQTRA-IVMGGANRRTEAEKL-INGTNILVATPGRLLD 345
           + PTRELA Q     + L   H      +V+GG     E +++  N   ILVATPGRL D
Sbjct: 161 VCPTRELADQAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKD 220

Query: 346 HLQSTRGFV--FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVE 403
           H+++T GF      ++ L++DEADR L++GF  ++  I+  LPK RQT+LFSAT   +V 
Sbjct: 221 HMENTPGFATRLMGVKVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSATVPDEVR 280

Query: 404 DLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFM 463
            +  ++ ++    +    E    T   ++Q   + P +++F +L+  L  +  + +   +
Sbjct: 281 QVCHIAMKRDLEFVNTVEEGSEETHSQVKQMHVVAPLDKQFSILYGLLTDHISENVDYKV 340

Query: 464 SSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIP 523
           +S       AELL+ + + V ++H ++ QS RT    EF   +   L+ +DV+ARG+D P
Sbjct: 341 TS-----LVAELLSELKLNVREIHSRKPQSYRTRISKEFKESKGLILVSSDVSARGVDYP 395

Query: 524 AVDWIVQYDPPDEPKEYIHRVGRTA-RGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEY 582
            V  +VQ   P + ++YIHR+GRT  RG  G G  IL L P E  FL+ ++D  +P+ E 
Sbjct: 396 NVTLVVQMGVPTDREQYIHRLGRTGRRGNEGSG--ILLLAPWEEYFLRSIKD--LPITEA 451

Query: 583 EFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSM--KDVFNVHELDIAAV 640
             P   L D + ++EK +   +   K     ++++L  Y S+    +D + +  L     
Sbjct: 452 TLPLIDL-DTKRKVEKALA--HVEVKDKELAYQAWLGYYNSNKFIGRDKYQLVSL-ANEF 507

Query: 641 AKSFGFSAPPRICLDVLER 659
           ++S G + PP +   VL +
Sbjct: 508 SRSLGLNNPPAVPKLVLRK 526

gb|EAL19173.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var. neoformans B-3501A]
gb|AAW45582.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_572889.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var. neoformans JEC21]
(484 aa)

Score: 224 bits (571), Expect: 7.42642e-57
Length: 362, Idn/Pos/Gap = 139/214/10 (38%/59%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L +S    R    MGF + ++IQA AIP AL G+DI+  A+TGSGKT AF +PI++ 
Sbjct:  40 FADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPILQT  99

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L    W       A+++APTRELA QI   +  L S      A+++GG +  +++  L  
Sbjct: 100 L----WENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSK 155

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+VATPGRL+DHL++T+GF  + L++LV+DEADR L++ F   + +IL+++PK R T
Sbjct: 156 RPHIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKILKVIPKERNT 215

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT TTKV  L + S   KP+ + + ++   +TV  L Q + ++P + +   L    
Sbjct: 216 YLFSATMTTKVAKLQRASL-NKPVRVEVSSK--YSTVSTLLQHYLLLPLKNKDAYLLYLA 272

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                  +++F  +    +  + +L  +  P + LHG+  QS R ++  +F     + L+
Sbjct: 273 NELSSSSMMIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSGGRSILV 332

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQ 570
            TDVA+RGLDIP VD ++ YD P   K+Y+HRVGRTAR   GR G++I  +   +V  LQ
Sbjct: 333 ATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARA--GRSGKSITLVTQYDVEILQ 390

Query: 571 HL 572
            +
Sbjct: 391 RI 392

gb|AAF96116.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar eltor str. N16961]
ref|NP_232603.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar eltor str. N16961]
pir||E82488 ATP-dependent RNA helicase RhlE VCA0204 [imported] - Vibrio cholerae (strain N16961 serogroup O1)
(451 aa)

Score: 224 bits (571), Expect: 7.80766e-57
Length: 339, Idn/Pos/Gap = 127/199/4 (37%/58%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS P L+ IEE G+   + IQ +AIP  L+G+D++A+A+TG+GKT  F +PI+EL
Sbjct:   3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L K   +  N   A+I+ PTRELA QI   +     H     A+V GG     + +++  
Sbjct:  63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G +ILVATPGRL+D L +     F+ L  LV+DEADR L++GF  ++H+IL++LP+ RQ 
Sbjct: 123 GADILVATPGRLMD-LYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT +T++ +LAK      P+ + +      +T   ++Q       +++  +L   +
Sbjct: 182 LLFSATFSTEIRELAK-GLVNNPVEISVSPAN--STARTVEQCIYPADVKKKPDMLVKLV 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K    ++++VFM + +G    A  LN   +    +HG + Q  RT    +F   E   L+
Sbjct: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            TD+AARG+DIP +  +V ++ P   ++Y+HR+GRT R 
Sbjct: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRA 337

ref|NP_173078.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
gb|AAD34681.1| Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member of PF|00270 DEAD/DEAH box helicase family. [Arabidopsis thaliana]
pir||G86297 F3O9.8 protein - Arabidopsis thaliana
(491 aa)

Score: 224 bits (570), Expect: 8.62988e-57
Length: 397, Idn/Pos/Gap = 136/225/17 (34%/56%/4%)

Query: 187 QSLSSEHASEQ----EQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIP 242
           Q L S+  + Q      P PSS   +   F+ L L+E  +   +E+G  + T +Q   +P
Sbjct:  31 QKLDSDQNTPQFEKFTNPNPSSDTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVP  90

Query: 243 LALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVL 302
             L+GRD+L  A+TGSGKT AF +PI+  L +  +    G  A+++ PTRELA Q+    
Sbjct:  91 KILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPY----GVFALVVTPTRELAFQLAEQF 146

Query: 303 HDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGF--VFEHLRF 360
             L S  +   ++++GG +  T+   L++  +I++ TPGR+   L++      VF   +F
Sbjct: 147 KALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKF 206

Query: 361 LVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGID 420
           LV+DEADR L++GF++E+  I + LPK+RQT+LFSAT T+ ++ L + S  +   +   +
Sbjct: 207 LVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFY---E 263

Query: 421 AEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKI---IVFMSSCNGVKFYAELLN 477
           A + + TV+ L Q F     + +   L   L + + K I   ++F+S+C   +  + +L+
Sbjct: 264 AYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLD 323

Query: 478 YIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEP 537
            ++V  + +H    QS R S   +F   +   LL TDVA+RGLDIP VD ++ YD P +P
Sbjct: 324 ELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDP 383

Query: 538 KEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRD 574
           ++Y+HRVGRTAR   G G A+  +  ++V  +  + +
Sbjct: 384 RDYVHRVGRTARAGRG-GLAVSIITETDVKLIHKIEE 419

sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3
gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
(543 aa)

Score: 223 bits (569), Expect: 1.19489e-56
Length: 340, Idn/Pos/Gap = 134/193/8 (39%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L    ++  + + +++ T IQ++AIP AL G DI+  A+TGSGKT AF IPI+  
Sbjct: 125 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNR 184

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L    W  +    A I+APTRELA QI      L S        ++GG N   +A  L+ 
Sbjct: 185 L----WHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMR 240

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQ 390
             +I++ATPGRL+DHL++T+GF    L+FLV+DEADR L++ F   +  IL+I+P + R 
Sbjct: 241 KPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERT 300

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T LFSAT T+K++ L + S    P+   +  +    TV+ L Q   +VP   +   L   
Sbjct: 301 TYLFSATMTSKIDKLQRASLTN-PVKCAVSNK--YQTVDTLVQTLMVVPGGLKNTYLIYL 357

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     K +I+F  +    +  + L N ++     LHG   Q++R  +   F   + + L
Sbjct: 358 LNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSIL 417

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           + TDVAARGLDIP+VD +V YD P + K YIHRVGRTAR 
Sbjct: 418 VATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARA 457

ref|ZP_00361257.1| COG0513: Superfamily II DNA and RNA helicases [Polaromonas sp. JS666]
(492 aa)

Score: 223 bits (567), Expect: 1.90656e-56
Length: 384, Idn/Pos/Gap = 143/222/12 (37%/57%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +L L+EP  R + EMG+  MT IQ +AIP+ L G+D++ +A+TG+GKT AF +P+++ 
Sbjct:   5 FSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFSLPLLQR  64

Query: 272 LYK---AKWMP-RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           + K   A   P R+   A+++ PTRELA+Q+   +   A H +   A+V GG + + +  
Sbjct:  65 MLKHENASTSPARHPVRALVLLPTRELAVQVAEQVKLYAKHTNLRSAVVFGGMDMKPQTL 124

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           +L  G  +LVATPGRLLDH+++ +  V   + ++V+DEADR L+IGF  ++  IL  LPK
Sbjct: 125 ELKQGVEVLVATPGRLLDHIEA-KNTVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPK 183

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            R T+LFSAT + +++ LA  S+ Q P+   I+  +  AT   ++Q F  V ++ + R L
Sbjct: 184 QRITLLFSATFSPEIKRLAS-SYLQDPV--TIEVARSNATASTVEQHFYSVGADDKRRAL 240

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              LK    K+  VF++S  G    A  L    +    LHG + Q +R      F + E 
Sbjct: 241 HQILKERGMKQAFVFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALDAFKKGEV 300

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE-- 565
             L+CTDVAARGLDI  V  +  +D P   ++Y+HR+GRT R     G A+ F+  S+  
Sbjct: 301 DLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRA-GASGLAVSFVASSDQR 359

Query: 566 -VGFLQHLRDAKVPLNEYEFPKEK 588
            V  ++ L   K+ L   EF +++
Sbjct: 360 LVADIEKLIKTKIELEPIEFDEDR 383

ref|NP_011932.2| Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity [Saccharomyces cerevisiae]
(501 aa)

Score: 222 bits (566), Expect: 2.55316e-56
Length: 340, Idn/Pos/Gap = 134/193/8 (39%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L    ++  + + +++ T IQ++AIP AL G DI+  A+TGSGKT AF IPI+  
Sbjct:  83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNR 142

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L    W  +    A I+APTRELA QI      L S        ++GG N   +A  L+ 
Sbjct: 143 L----WHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMR 198

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQ 390
             +I++ATPGRL+DHL++T+GF    L+FLV+DEADR L++ F   +  IL+I+P + R 
Sbjct: 199 KPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERT 258

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T LFSAT T+K++ L + S    P+   +  +    TV+ L Q   +VP   +   L   
Sbjct: 259 TYLFSATMTSKIDKLQRASLTN-PVKCAVSNK--YQTVDTLVQTLMVVPGGLKNTYLIYL 315

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     K +I+F  +    +  + L N ++     LHG   Q++R  +   F   + + L
Sbjct: 316 LNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSIL 375

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           + TDVAARGLDIP+VD +V YD P + K YIHRVGRTAR 
Sbjct: 376 VATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARA 415

emb|CAG83247.1| unnamed protein product [Yarrowia lipolytica CLIB99]
ref|XP_500994.1| hypothetical protein [Yarrowia lipolytica]
(753 aa)

Score: 222 bits (566), Expect: 2.84568e-56
Length: 390, Idn/Pos/Gap = 141/227/17 (36%/58%/4%)

Query: 176 PEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHR-FDSLPLSEPTLRGIEEMGFARMT 234
           P + +      + +++ +A E+E    +  +   H+ F +L LS P ++GI  +G+   T
Sbjct: 220 PAIDEGPQDTAEEMAAFYAPEEENNDKTESV---HKTFQTLNLSRPVMKGISALGYQAPT 276

Query: 235 EIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLYKAKWMPRNGTGAIIIAPTRE 293
            IQ+R IP+AL G+D++A A TGSGKT A++IP++E LLYK+  +    T  +++ PTRE
Sbjct: 277 PIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVA--ATKVVVLTPTRE 334

Query: 294 LAMQIFGVLHDLASHHHQTR-AIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRG 352
           L++Q+  V   LA +    R  + +GG N R + ++L     +++ATPGR +DH++++  
Sbjct: 335 LSIQVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQELKTRPEVVIATPGRFIDHVRNSPS 394

Query: 353 FVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQ 412
           F  + +  LVIDEADR LE GF++E+ EIL +LPK RQT+LFSAT               
Sbjct: 395 FNVDDVEILVIDEADRMLEEGFQQELTEILTLLPKKRQTLLFSATM-NSSISSLIQLSLS 453

Query: 413 KPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR--LLFTFLKR-NQRKKIIVFMSSCNGV 469
           +P+ + I+  +  A+  GL Q F  +      +  LL + LK+ ++ ++ I+F++     
Sbjct: 454 RPVRVMINPPKQAAS--GLVQEFVRIRKRDHLKPALLASILKKMDKEQRTIIFVARKETA 511

Query: 470 KFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIV 529
                +L  + V + +LHG   Q +R  +   F + E   L+CTD+A+RGLDIP ++ +V
Sbjct: 512 HRLRIMLGLLGVRIGELHGALSQEQRLQSITAFKKLEVPILVCTDLASRGLDIPKIECVV 571

Query: 530 QYDPPDEPKEYIHRVGRTARGVHGR-GRAI 558
            YD P     Y+HRVGRTAR   GR GR+I
Sbjct: 572 NYDMPQTHAVYLHRVGRTARA--GREGRSI 599

gb|EAA65668.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
ref|XP_404975.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
(1676 aa)

Score: 222 bits (565), Expect: 4.10796e-56
Length: 401, Idn/Pos/Gap = 143/219/16 (35%/54%/3%)

Query:  170 PLARPCPEVTQKSSPALQSLSSEH--------ASEQEQPKPSSGLLTPHRFDSLPLSEPT  221
            P+  P  E ++  S A   + +E         A E++  + ++       F    LS P 
Sbjct:  742 PVHHPDDEASEPDSDAESEVDAEEEAKRKAFFAPEEKTDEDAATNSAKRSFQEFNLSRPI  801

Query:  222 LRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLYKAKWMPR  280
            LRG+  + F   T IQ + IP+AL G+DI+ SA TGSGKT AF++PI+E LL++ + +P 
Sbjct:  802 LRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPT  861

Query:  281 NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATP  340
            +     I+ PTRELA+Q + V   LA++   T   ++GG + R +   L    ++++ATP
Sbjct:  862 SRVA--ILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIATP  919

Query:  341 GRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTT  400
            GR +DH++++  F  + L  LV+DEADR LE GF +E++EIL  +PK+RQTMLFSAT T 
Sbjct:  920 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTD  979

Query:  401 KVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL--LFTFLKRNQRKK  458
             V+ L +V    +P+ L +D ++  A V  +Q+   + P  +  RL  L    K     +
Sbjct:  980 SVDKLIRVGL-NRPVRLMVDTKKNTA-VTLVQEFVRLRPGREDKRLGYLLHLCKEVYTGR 1037

Query:  459 IIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAAR  518
            +IVF            +   + +   +LHG   Q +R  +   F       LL TD+A+R
Sbjct: 1038 VIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIKSVESFRDGNVNFLLATDLASR 1097

Query:  519 GLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAI  558
            GLDI  V+ ++ Y+ P   + Y+HRVGRTAR G  GR   I
Sbjct: 1098 GLDIKGVETVINYEAPQSHEIYVHRVGRTARAGRSGRACTI 1138

gb|EAK87922.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc) [Cryptosporidium parvum]
(446 aa)

Score: 221 bits (564), Expect: 4.35504e-56
Length: 388, Idn/Pos/Gap = 140/217/12 (36%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL + +      E +G+   TEIQ + IP+AL GRDI+  A TGSGKT +F+IPI++ 
Sbjct:  35 FASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQR  94

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L   + +P     A+I+APTREL +QI        S      A ++GG +   ++  L  
Sbjct:  95 LLDDQ-VPMY---AVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLSLAK 150

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+VA+PGRL+DHL++T+GF    ++FLV+DEADR L + FE  +++I+   P+ R T
Sbjct: 151 KPHIIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVESSPRNRTT 210

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT TTKV  L K+S    P+ + ++ +   A    L Q +  +P + ++      L
Sbjct: 211 YLFSATMTTKVAKLQKISLSN-PIKICVNTKYDTAA--NLMQYYMFIPFKYKWSYFIGML 267

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           +   +   I+F ++C   +    L   +    + LHG+  QS+R S    F  ++   L 
Sbjct: 268 QNLGQYTGIIFCNTCINCRRGDLLAKELGFNSISLHGRMSQSQRLSALNLFKGKQKRLLF 327

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQ 570
            T+V +RGLDIP VD+++ +D P   K+Y+HRVGRTAR   GR GRAI  +   +V   Q
Sbjct: 328 TTEVGSRGLDIPHVDFVINFDIPTSSKDYVHRVGRTARA--GRSGRAISMVTQYDVETFQ 385

Query: 571 HLRDA-KVPLNEY-EFPKEKLADIQTQL 596
            +  A    L+EY    +E++  I  ++
Sbjct: 386 RIEFALNRKLDEYTSLQREEVMAIHAKV 413

dbj|BAD61516.1| myc-regulated DEAD/H box 18 RNA helicase-like [Oryza sativa (japonica cultivar-group)]
(535 aa)

Score: 221 bits (564), Expect: 4.69467e-56
Length: 383, Idn/Pos/Gap = 136/224/19 (35%/58%/4%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           L+  RFD  P+S  +L+ I++ G+ +MT++Q   +P+ L G D+LA A+TG+GKT+AFL+
Sbjct:  70 LSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLL 129

Query: 267 PIVELLYKAKWMPRNGT-GAIIIAPTRELAMQIFGVLHDLASHHHQTRA-IVMGGANRRT 324
           P +ELL     +PR+ +   ++I PTRELA Q+      L  +H      +V+GG     
Sbjct: 130 PAIELLST---LPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTKLPQ 186

Query: 325 EAEKL-INGTNILVATPGRLLDHLQSTRGFV--FEHLRFLVIDEADRCLEIGFEEEMHEI 381
           E   +  N   ILVATPGRL DHL++T GF    + ++ LV+DEADR L++GF  ++ +I
Sbjct: 187 EQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKI 246

Query: 382 LRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSE 441
           +  +PK RQT+LFSAT   +V  ++ ++ ++    +    E    T   + Q + + P +
Sbjct: 247 IAFIPKERQTLLFSATVPEEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQMYMVAPLD 306

Query: 442 QRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTS 497
             F +L+  LK++  +    K+IVF ++    K  AE+L+ + + + ++H ++ QS RT 
Sbjct: 307 LHFSILYNVLKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSARTK 366

Query: 498 TFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGR- 556
              EF + +   L+ +DV+ARG+D P V  ++Q   P + ++YIHR+GRT R    +G+ 
Sbjct: 367 VSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGR----KGKD 422

Query: 557 --AILFLLPSEVGFLQHLRDAKV 577
              +L L P E  FL  ++D  V
Sbjct: 423 GLGLLLLAPWETYFLNSVQDLSV 445

gb|AAH75762.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
(468 aa)

Score: 221 bits (564), Expect: 4.93568e-56
Length: 394, Idn/Pos/Gap = 136/217/18 (34%/55%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+SL LSE  ++  ++MG +R T +Q + IP  L GRD +  A+TGSGKT AF++P+++ 
Sbjct:   4 FESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +  T+  +L  
Sbjct:  64 LSEDPY----GVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSK 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             +++VATPGRL DH++S+       ++FL++DEADR LE G   F +++  IL  +P  
Sbjct: 120 KPHVVVATPGRLADHIRSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVPAK 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  ++ L  ++   +P     + +  V TVE L Q F + P + +     
Sbjct: 180 RQTLLFSATLTDTLQQLQSIAMN-RPFFW--EHKSDVQTVEELDQRFILTPEKVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF   +    II+F ++C   +    +L   + P + LH   KQ +R +   +F  
Sbjct: 237 HLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLVKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
                L+ TDVAARGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G +I  +  
Sbjct: 297 NVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGVSITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +  +  L E+   ++++  I TQ+
Sbjct: 355 YDIHLINAIEEQNQTKLKEFPIEEKEVLKILTQV 388

emb|CAH95521.1| RNA helicase, putative [Plasmodium berghei]
(499 aa)

Score: 221 bits (564), Expect: 5.32059e-56
Length: 376, Idn/Pos/Gap = 131/210/14 (34%/55%/3%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDIL 251
           +H +EQ Q   +  + +   F  L + E  L+ I+E+G+ + T IQ + +PL    RDI+
Sbjct:  78 DHENEQNQDSETKEITS---FSQLNICEEILQSIQELGWEKPTLIQQKVLPLMFQKRDII 134

Query: 252 ASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ 311
             + TGSGKT  F+IPI++ L     + +    A+II+PTREL +QI      L S+   
Sbjct: 135 GLSETGSGKTACFIIPILQELK----LKKQNFFALIISPTRELCIQIAQNAQALGSNLLI 190

Query: 312 TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLE 371
               + GG +  T++  L    NI+++TPGR+LDHL +T+GF  ++L++LV DEAD+ L 
Sbjct: 191 NICTIFGGVDIVTQSLNLAKKPNIIISTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLS 250

Query: 372 IGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGL 431
           + FE  ++++L ILPK R T LFSAT T  V  L K S +     + I+     +TV+ L
Sbjct: 251 LDFESSINKLLLILPKNRITFLFSATMTKSVAKLKKTSLKNP---IKIEVSNKYSTVKTL 307

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQK 491
            + +  +P + ++  L +       K II+F ++C   +        + +  + LHGK  
Sbjct: 308 IENYIFLPLKYKYTYLCSLCFYYTNKNIIIFSNTCATAQKLNFFCRNLGLKSICLHGKLT 367

Query: 492 QSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGV 551
           Q++R S+   F   ++  L+ T V ARGLD+  +  ++ +D     KEYIHRVGRTAR  
Sbjct: 368 QNQRLSSLNLFKTNKYNILISTQVGARGLDLQNIKIVINFDLC-SCKEYIHRVGRTARA- 425

Query: 552 HGR-GRAILFLLPSEV 566
            G+ G++I F+   +V
Sbjct: 426 -GKTGKSITFVTQYDV 440

gb|AAS50202.1| AAL164Cp [Ashbya gossypii ATCC 10895]
ref|NP_982378.1| AAL164Cp [Eremothecium gossypii]
(734 aa)

Score: 221 bits (562), Expect: 8.07498e-56
Length: 346, Idn/Pos/Gap = 131/208/12 (37%/60%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F+SL LS P L+G+  +G+ + + IQ   IP+AL G+D++A A TGSGKT AF+IPI+E 
Sbjct: 221 FNSLSLSRPVLKGLAALGYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPIIER 280

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASH-HHQTRAIVMGGANRRTEAEKL 329
           LLYK   +    T  +++ PTRELA+Q+  V   L       T  + +GG N R + + L
Sbjct: 281 LLYKPAKIA--STRVLVLTPTRELAIQVADVGKKLGKFVSGLTFGLAVGGLNLRQQEQAL 338

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               +I++ATPGR++DH++++  F  + +  LVIDEADR LE GF++E++EI+ ++P  R
Sbjct: 339 KLRPDIVIATPGRIIDHIRNSASFSVDSVEVLVIDEADRMLEDGFQDELNEIMSLIPSKR 398

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR--LL 447
           QT+LFSAT  ++++ L  +S  +KP+ + ID   P      L Q F  +   +  +  LL
Sbjct: 399 QTLLFSATMNSRIKQLISLSL-KKPVRIMIDP--PKQAANKLTQEFVRLRKREHLKPALL 455

Query: 448 FTFLKR---NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
           +  L++     +K+I+VF++          +L  + +   +LHG   Q +R  +   F  
Sbjct: 456 YHLLRKLDSTGQKRIVVFVARKEVAHRLRVILGLLGMKAGELHGSLTQEQRLQSVNNFKS 515

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            +   L+CTD+A+RGLDIP ++ ++ YD P   + Y+HRVGRTAR 
Sbjct: 516 LDVPVLVCTDLASRGLDIPKIEVVINYDMPKTYEIYLHRVGRTARA 561

emb|CAG00770.1| unnamed protein product [Tetraodon nigroviridis]
(456 aa)

Score: 221 bits (562), Expect: 8.92535e-56
Length: 384, Idn/Pos/Gap = 133/212/16 (34%/55%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS+  ++  +++G  + T +Q   +P  L GRD +  A+TGSGKT AF++P+++ 
Sbjct:   4 FSSLGLSDWLVKQCKQLGIHKPTPVQENCVPAILQGRDCMGCAKTGSGKTAAFVLPVLQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         IV+GG +  ++A +L N
Sbjct:  64 LSEDPY----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIVVGGMDMVSQASELSN 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             +++VATPGRL DH++S+  F    ++FL++DEADR LE G   F +++  I+  LP  
Sbjct: 120 QPHVVVATPGRLADHIRSSSTFSMSKIQFLIMDEADRLLEQGCTDFTKDLETIMPALPAK 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  +++L  ++   KP     +++    TV+ L Q + + P + +     
Sbjct: 180 RQTLLFSATLTDTLQELKNIAMN-KPFFW--ESKSETRTVDELDQRYILTPEKVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF  ++    II+F ++C   +    +L   + P + LH   KQ +R +   +F  
Sbjct: 237 HLIQTFTDQHDDWSIIIFTNTCKNCQILTMMLQQFNFPTISLHSMMKQKQRFANLAKFKA 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
             +  L+ TDVAARGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR    + L+  
Sbjct: 297 SVYKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGVSITLVTQ 354

Query: 565 EVGFLQHLRDAKVPLNEYEFPKEK 588
               L H  + ++     EFP E+
Sbjct: 355 YDIHLVHSIEEQIQTKLKEFPVEE 378

gb|AAH47834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
ref|NP_938179.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
(468 aa)

Score: 220 bits (561), Expect: 9.46217e-56
Length: 394, Idn/Pos/Gap = 136/217/18 (34%/55%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+SL LSE  ++  ++MG +R T +Q + IP  L GRD +  A+TGSGKT AF++P+++ 
Sbjct:   4 FESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +  T+  +L  
Sbjct:  64 LSEDPY----GVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSK 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             +++VATPGRL DH++S+       ++FL++DEADR LE G   F +++  IL  +P  
Sbjct: 120 KPHVVVATPGRLADHIRSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVPAK 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  ++ L  ++   +P     + +  V TVE L Q F + P + +     
Sbjct: 180 RQTLLFSATLTDTLQQLQSIAMN-RPFFW--EHKSDVQTVEELDQRFILTPEKVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF   +    II+F ++C   +    +L   + P + LH   KQ +R +   +F  
Sbjct: 237 HLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
                L+ TDVAARGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G +I  +  
Sbjct: 297 NVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGVSITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +  +  L E+   ++++  I TQ+
Sbjct: 355 YDIHLINAIEEQNQTKLKEFPIEEKEVLKILTQV 388

gb|EAL72548.1| hypothetical protein DDB0191022 [Dictyostelium discoideum]
(508 aa)

Score: 220 bits (561), Expect: 9.70201e-56
Length: 371, Idn/Pos/Gap = 139/210/12 (37%/56%/3%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           ++   F+ L L+   +   +++GF   + IQA  IP  L GRDI+ASA+TGSGKT +F I
Sbjct:   1 MSDKTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAI  60

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           PI+  L +  +    G  A+I+ PTRELA+QI    + + +  +   ++V+GG +  T+A
Sbjct:  61 PILNQLSEDPY----GVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQA 116

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
             L    +I+VATPGRL  HL +      +  +FLV+DEADR L   FE E+  IL  LP
Sbjct: 117 LILDKRPHIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLP 176

Query: 387 --KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRF 444
             + RQT+LFSAT T  +  L  ++   KP     +      TV+ L+Q +  +P+  + 
Sbjct: 177 PPEKRQTLLFSATMTKNLTKLDSIALN-KPFIF--EDNSKYDTVDTLKQEYIYMPAPTKD 233

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             L   LK+++    IVF+++C  V+    +LN +D+P + LH    Q  R +    F  
Sbjct: 234 CYLVYILKKHEGSSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKS 293

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
            +   L+ TDVA+RGLDIP V  ++ Y   +  K+YIHRVGRTAR   GR GRAI F+ P
Sbjct: 294 GKVKVLVATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTAR--FGRSGRAISFITP 351

Query: 564 SEVGFLQHLRD 574
            +V  ++ + +
Sbjct: 352 HDVSLIKGIEE 362

gb|AAT68047.1| DEAD box polypeptide 27 [Danio rerio]
ref|NP_001002869.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Danio rerio]
(776 aa)

Score: 220 bits (560), Expect: 1.22553e-55
Length: 417, Idn/Pos/Gap = 151/236/16 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   +P+ L G+DI A A TG+GKT AF++P++E 
Sbjct: 203 FHDMNLSRPLLKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGTGKTAAFMLPVLER 262

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +      T  +++ PTREL +Q+  V   LA     +  + +GG + +++   L 
Sbjct: 263 LIYKPR--ETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKSQEAALR 320

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++L+ATPGRL+DHL +T  F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 321 AGPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEIIRMCAYQRQ 380

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT + +V+DLA VS +Q P+ + +++   VA    L+Q F  I P+++  R  ++
Sbjct: 381 TMLFSATMSEEVKDLASVSLKQ-PVRIFVNSNTDVAPY--LRQEFVRIRPNKEGDREAIV 437

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R  +  +++F  +         LL  + + V +LHG   Q++R  +   F   + 
Sbjct: 438 AALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQI 497

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   G+ GR++  +  +E 
Sbjct: 498 DILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARA--GKVGRSVSLVGETER 555

Query: 567 GFLQHL-RDAKVPLNEYEFPKE---KLADIQTQLEKLVEGNYYLQKSARDGFRSYLQ 619
             L+ + + AK P+     P+E   K  D+  +LEK V     L+K  ++   S  Q
Sbjct: 556 KMLKEIVKKAKFPVKARVIPQEVILKFRDLIEKLEKDVYAVLCLEKEEKEMAHSEAQ 612

emb|CAD98299.1| DEAD/DEAH box RNA helicase, possible [Cryptosporidium parvum]
(543 aa)

Score: 220 bits (560), Expect: 1.29924e-55
Length: 391, Idn/Pos/Gap = 149/208/32 (38%/53%/8%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           + SL LS P L+ + ++ F   T IQ   IPLALSGRDI+A A TGSGKT AFL+P +E 
Sbjct:   2 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER  61

Query: 272 LYKAKWMPRN-------------GTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVM 317
           L ++ ++ RN             GT  +++ P+RELAMQ FGVL  L  +    TRA+V 
Sbjct:  62 LLRSPYV-RNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVT 120

Query: 318 GGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEE 377
           GG N + +   L    +I++ATPGR+LD L +T     E L  +++DEADR L++GF +E
Sbjct: 121 GGMNIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQE 180

Query: 378 MHEILRILPKTRQTMLFSATQTTKVEDLA-----------KVSFQQKPLHLGIDAEQPVA 426
             EIL+   +TRQTMLFSAT +  V DLA            V  +     +G   E  + 
Sbjct: 181 CLEILKYSSRTRQTMLFSATLSRSVTDLALLALNNPCKVSTVGLKSGIKSVGSSGESELL 240

Query: 427 TVEGL-----QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV 481
           ++ GL     Q+   I   E+R   LF  L +   K++IVF  +       A L N   +
Sbjct: 241 SITGLSSTLEQEFLEITKEEEREGALFYILNKIFTKRVIVFFQTKKEAHRCAILGNIFGL 300

Query: 482 PVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYI 541
              +LHG   Q KR   F +F   +   L  +++AARGLD+  V  ++ +  P E   YI
Sbjct: 301 SSTELHGFLPQEKRLENFSKFKSGQVDILFASELAARGLDVQDVSAVINFTIPLEASRYI 360

Query: 542 HRVGRTARGVHGRGRAILFLLPSEVGFLQHL 572
           HRVGRTAR +  +G  I     SE   L+ L
Sbjct: 361 HRVGRTAR-IGSKGNCITIYTRSERSQLKAL 390

gb|EAK90172.1| Drs1p, eIF4a-1-family RNA SFII helicase [Cryptosporidium parvum]
(573 aa)

Score: 220 bits (560), Expect: 1.31013e-55
Length: 391, Idn/Pos/Gap = 149/208/32 (38%/53%/8%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           + SL LS P L+ + ++ F   T IQ   IPLALSGRDI+A A TGSGKT AFL+P +E 
Sbjct:  32 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER  91

Query: 272 LYKAKWMPRN-------------GTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVM 317
           L ++ ++ RN             GT  +++ P+RELAMQ FGVL  L  +    TRA+V 
Sbjct:  92 LLRSPYV-RNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVT 150

Query: 318 GGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEE 377
           GG N + +   L    +I++ATPGR+LD L +T     E L  +++DEADR L++GF +E
Sbjct: 151 GGMNIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQE 210

Query: 378 MHEILRILPKTRQTMLFSATQTTKVEDLA-----------KVSFQQKPLHLGIDAEQPVA 426
             EIL+   +TRQTMLFSAT +  V DLA            V  +     +G   E  + 
Sbjct: 211 CLEILKYSSRTRQTMLFSATLSRSVTDLALLALNNPCKVSTVGLKSGIKSVGSSGESELL 270

Query: 427 TVEGL-----QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV 481
           ++ GL     Q+   I   E+R   LF  L +   K++IVF  +       A L N   +
Sbjct: 271 SITGLSSTLEQEFLEITKEEEREGALFYILNKIFTKRVIVFFQTKKEAHRCAILGNIFGL 330

Query: 482 PVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYI 541
              +LHG   Q KR   F +F   +   L  +++AARGLD+  V  ++ +  P E   YI
Sbjct: 331 SSTELHGFLPQEKRLENFSKFKSGQVDILFASELAARGLDVQDVSAVINFTIPLEASRYI 390

Query: 542 HRVGRTARGVHGRGRAILFLLPSEVGFLQHL 572
           HRVGRTAR +  +G  I     SE   L+ L
Sbjct: 391 HRVGRTAR-IGSKGNCITIYTRSERSQLKAL 420

emb|CAG35665.1| probable ATP-dependent RNA helicase [Desulfotalea psychrophila LSv54]
ref|YP_064672.1| ATP-dependent RNA helicase [Desulfotalea psychrophila LSv54]
(423 aa)

Score: 220 bits (560), Expect: 1.31013e-55
Length: 359, Idn/Pos/Gap = 134/203/6 (37%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F++L LS P L+ + E G+   + IQA+AIP+ + G+D++A+A+TG+GKT AF +PI+EL
Sbjct:   3 FNTLGLSAPLLKAVAEKGYDTPSPIQAKAIPVIMEGKDVMAAAQTGTGKTAAFTLPILEL  62

Query: 272 LYKAKW-MPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L ++K  +  N    +I+ PTRELA QI   +         T A++ GG N   + ++L 
Sbjct:  63 LSQSKRRVQANQARVLILTPTRELAAQIGESVTTYGKGLSLTSAVIFGGVNINPQMKRLR 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +ILVATPGRLLD L       F  L  LV+DEADR L++GF  ++ ++L  LPK RQ
Sbjct: 123 GGVDILVATPGRLLD-LHRQNAIKFNRLEILVLDEADRMLDMGFINDIRKVLAFLPKERQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
            ++FSAT ++ + +LA+  F   P+ + +    P +TVE + Q    V  +Q+  LL   
Sbjct: 182 NLMFSATFSSSINNLARGMFNN-PVEISVTP--PNSTVEIIDQCIYPVDKKQKPALLIQL 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           ++ N+  + +VF  + +G       L    +    +HG + QS RT    EF       L
Sbjct: 239 IRDNKWGQTLVFSKTKHGANRLVGQLQKKGINAAAIHGNKSQSARTKALAEFKNGTVQIL 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           + TD+AARGLDI  +  +V +D P   ++YIHR+GRT R     G AI  +   E   L
Sbjct: 299 VATDIAARGLDIDLLPHVVNFDLPHVQEDYIHRIGRTGRA-GASGEAISLVCADEFALL 356

dbj|BAD61515.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
(594 aa)

Score: 220 bits (560), Expect: 1.3211e-55
Length: 384, Idn/Pos/Gap = 132/223/15 (34%/58%/3%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           L+  RFD   +S  +L+ +++ G+ RMT++Q   +P+ L G+D+LA A+TG+GKT+AFL+
Sbjct: 123 LSDTRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLL 182

Query: 267 PIVELLY----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR 322
           P +E+L       +   R     +++ PTRELA+Q+      L  +H      V+ G  R
Sbjct: 183 PAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTR 242

Query: 323 RTEAEKLI--NGTNILVATPGRLLDHLQSTRGFV--FEHLRFLVIDEADRCLEIGFEEEM 378
            T+ ++ +  N   ILVATPGRL DH+++T GF    + ++ LV+DEADR L++GF  ++
Sbjct: 243 LTQEQRSMQANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDI 302

Query: 379 HEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIV 438
             I+  +PK RQT+LFSAT   +V  ++ ++ ++    +    +    T   + Q F I 
Sbjct: 303 ERIIASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFMIA 362

Query: 439 PSEQRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSK 494
           P +  F +L+  LK++  +    K+I+F ++    K  AE+L+ + + + ++H ++ QS 
Sbjct: 363 PLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQSA 422

Query: 495 RTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHG 553
           RT    EF +     L+ +DV+ARG+D P V  ++Q   P + ++YIHR+GRT R G  G
Sbjct: 423 RTKVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGRTGRKGKEG 482

Query: 554 RGRAILFLLPSEVGFLQHLRDAKV 577
           +G  +L L P E  FL  ++D  +
Sbjct: 483 QG--LLLLAPWEKYFLSSIKDLSI 504

ref|XP_514711.1| PREDICTED: hypothetical protein XP_514711 [Pan troglodytes]
(751 aa)

Score: 219 bits (559), Expect: 1.64116e-55
Length: 399, Idn/Pos/Gap = 146/224/13 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA   + T  + +GG + +++   L 
Sbjct: 280 LIYKPRQAPV--TRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 337

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 338 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 397

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 398 TMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 454

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 455 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 514

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E 
Sbjct: 515 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA--GRAGRSVSLVGEDER 572

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 573 KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 611

gb|EAA75939.1| hypothetical protein FG06628.1 [Gibberella zeae PH-1]
ref|XP_386804.1| hypothetical protein FG06628.1 [Gibberella zeae PH-1]
(796 aa)

Score: 219 bits (559), Expect: 1.66878e-55
Length: 347, Idn/Pos/Gap = 130/208/9 (37%/59%/2%)

Query: 208 TPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIP 267
           T   F ++ LS P +RG+  +GF + T IQA++IP+AL G+D++  A TGSGKT AF++P
Sbjct: 254 TASSFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILP 313

Query: 268 IVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           I+E LLY+ K +P   T  +++ PTRELA+Q   V   LA+       + +GG + + + 
Sbjct: 314 ILERLLYRPKKIPT--TRVVVLLPTRELAIQCHAVATKLAAFTDIKFTLAVGGLSLKAQE 371

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            +L    ++++ATPGR +DH++++  F  + +  LV+DEADR LE GF +E++EIL  LP
Sbjct: 372 LELKLRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEILTTLP 431

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIV---PSEQR 443
           K+RQTMLFSAT T+ V+ L ++    +P  + +++++   TV  L Q F  +     ++R
Sbjct: 432 KSRQTMLFSATMTSSVDRLIQIGL-NRPARVMVNSQK--KTVTTLVQEFVRLRPGREDKR 488

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
              L    K   ++++I+F            +   + +   +LHG   Q++R S+  +F 
Sbjct: 489 MGYLAHVCKNLYKERVIIFFRQKKDAHRARIIFGLLGLSCAELHGSMNQTQRISSVEDFR 548

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             + A LL TD+A+RGLDI  VD ++ Y+ P     Y+HRVGRTAR 
Sbjct: 549 DGKVAYLLATDLASRGLDIKGVDTVINYEAPQSLDIYVHRVGRTARA 595

gb|EAL37362.1| DEAD/DEAH box RNA helicase [Cryptosporidium hominis]
(543 aa)

Score: 219 bits (559), Expect: 1.85997e-55
Length: 391, Idn/Pos/Gap = 149/207/32 (38%/52%/8%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           + SL LS P L+ + ++ F   T IQ   IPLALSGRDI+A A TGSGKT AFL+P +E 
Sbjct:   2 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER  61

Query: 272 LYKAKWMPRN-------------GTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVM 317
           L ++ ++ RN             GT  +++ P+RELAMQ FGVL  L  +    TRA+V 
Sbjct:  62 LLRSPYV-RNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVT 120

Query: 318 GGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEE 377
           GG N + +   L    +I++ATPGR+LD L +T     E L  +++DEADR L++GF +E
Sbjct: 121 GGMNIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQE 180

Query: 378 MHEILRILPKTRQTMLFSATQTTKVEDLA-----------KVSFQQKPLHLGIDAEQPVA 426
             EIL+   +TRQTMLFSAT +  V DLA            V  +      G   E  + 
Sbjct: 181 CLEILKYSSRTRQTMLFSATLSRSVTDLALLALNNPCKVSTVGLKSGIKSAGSSGESELL 240

Query: 427 TVEGL-----QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV 481
           ++ GL     Q+   I   E+R   LF  L +   K++IVF  +       A L N   +
Sbjct: 241 SITGLSSTLEQEFLEITKEEEREGALFYILNKIFTKRVIVFFQTKKEAHRCAILGNIFGL 300

Query: 482 PVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYI 541
              +LHG   Q KR   F +F   +   L  +++AARGLD+  V  ++ +  P E   YI
Sbjct: 301 SSTELHGFLPQEKRLENFSKFKSGQVDILFASELAARGLDVQDVSAVINFTIPLEASRYI 360

Query: 542 HRVGRTARGVHGRGRAILFLLPSEVGFLQHL 572
           HRVGRTAR +  +G  I     SE   L+ L
Sbjct: 361 HRVGRTAR-IGSKGNCITIYTQSERSQLKAL 390

gb|AAO76992.1| putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
ref|NP_810798.1| putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
(374 aa)

Score: 219 bits (557), Expect: 2.70751e-55
Length: 350, Idn/Pos/Gap = 122/206/6 (34%/58%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L ++EP L+ IEE G+   T IQ +AIP+AL+ +DIL  A+TG+GKT +F IPI++ 
Sbjct:   3 FKELNITEPILKAIEEKGYTVPTPIQEKAIPVALAKKDILGCAQTGTGKTASFAIPIIQH  62

Query: 272 LYKAKWM-PRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+  K    R+   A+I+ PTRELA+QI   + D + +      ++ GG N+R + + L 
Sbjct:  63 LHLNKGEGKRSEIKALILTPTRELALQISECIEDYSKYTRIRHGVIFGGVNQRPQVDMLH 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +ILVATPGRLLD L +      +++++ V+DEADR L++GF  ++  IL  LPK +Q
Sbjct: 123 KGIDILVATPGRLLD-LMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKLPKEKQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+ FSAT    +  L   S  + P+ + +  +   +TV+ ++Q    V  +++  LL + 
Sbjct: 182 TLFFSATMPDTIIALTN-SLLKNPVKIYVTPKS--STVDSIKQLVYFVEKKEKSLLLISI 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L++++ + +++F  + +      ++L    +    +HG + Q+ R S    F   +   +
Sbjct: 239 LQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVM 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILF 560
           + TD+A+RG+DI  +  ++ YD PD P+ Y+HR+GRT R  +  G A+ F
Sbjct: 299 VATDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNA-GMALTF 347

ref|XP_425332.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1; DEAD/DEXH helicase DDX31; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 [Gallus gallus]
(1137 aa)

Score: 219 bits (557), Expect: 3.50674e-55
Length: 539, Idn/Pos/Gap = 174/255/136 (32%/47%/25%)

Query: 233 MTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTR 292
           MT +Q + IP+ L G+D L  ++TGSGKTLA+ IP+V+ L         G  + I     
Sbjct: 137 MTSVQKQTIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSL--------QGMQSKI----- 183

Query: 293 ELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTR 351
           +LA+Q F  +  L          ++MGG  R++E  +L  G NIL++TPGRL+DH++ST 
Sbjct: 184 QLALQTFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTE 243

Query: 352 GFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTMLFSATQTTKVEDLAKV 408
              F   ++L+IDEADR L++GFE+++  IL  L    +TRQ +L SAT T  V  LA +
Sbjct: 244 CIHFRRTQWLIIDEADRILDLGFEKDVTVILNALNAERETRQNVLLSATLTEGVTRLADI 303

Query: 409 SFQQKPLHLGIDAE------------------------QPVATVEGLQQGFTIVPSEQRF 444
           S    P+ + I  E                        +  A  E L+Q F +VPS+ R 
Sbjct: 304 SLND-PIRISIADEIRESLKPALQTEKEANSSSNRMDQENFAVPEKLKQYFMMVPSKLRL 362

Query: 445 RLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELL------------------NYIDVP 482
             L  F+    K  ++ K+I+F SSC  V+F+ ELL                  + + + 
Sbjct: 363 VTLAAFVLEKCKYEKQHKMIIFFSSCEQVEFHYELLVNVLSGELESEQPKRSSVSSVQLQ 422

Query: 483 VLDLHGKQKQSKRTSTFFEFARREHATLLCT----------------------------- 513
            L LHG  +Q +RT  F EF + +   LLCT                             
Sbjct: 423 FLRLHGNMEQEERTEVFQEFLKSKTGILLCTERTEVFQEFLKSKTGILLCTEMHACDHRD 482

Query: 514 --------DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPS 564
                   DVAARGLD+P V WIVQY+ P  P EYIHR+GRTAR G H  G ++L L PS
Sbjct: 483 SLVICIFQDVAARGLDLPQVTWIVQYNAPASPAEYIHRIGRTARIGCH--GNSLLVLAPS 540

Query: 565 EVGFLQHLRDAKVPLNEYEFPK------------------------------EKLADIQT 594
           E  ++  L   K+ ++E +  K                              E+   +QT
Sbjct: 541 EAEYVSLLASHKINVSEIKMEKVLSSLMKDDRFRLRRPGSKKSYGVDPQEVRERATVLQT 600

Query: 595 QLEKLVEGNYYLQKSARDGFRSYLQAYASH--SMKDVFNVHELDIAAVAKSFGFSAPPR 651
           Q E  V  +    + A+   +S+L AY ++  S+K +F++  + +  VAKSFG    P+
Sbjct: 601 QFENYVHSSEGTIRWAKKALQSFLCAYTAYPRSLKHIFHIKSIHLGHVAKSFGLRDAPQ 659

ref|YP_098942.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
emb|CAH07368.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
ref|YP_211306.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
dbj|BAD48408.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
(427 aa)

Score: 218 bits (556), Expect: 3.53612e-55
Length: 363, Idn/Pos/Gap = 129/205/9 (35%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F++L L EP L+ + + G+   T IQ ++IP+ L G+D+L  A+TG+GKT AF IPI++ 
Sbjct:   3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQK  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           LYK     R G  A+++ PTRELA+QI         +     A++ GG  ++ + + L +
Sbjct:  63 LYKTD--HRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRS 120

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           G  ILVATPGRLLD +  ++GF+    L F V+DEADR L++GF  ++  IL++LP  RQ
Sbjct: 121 GIQILVATPGRLLDLI--SQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQ 178

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+ FSAT   ++E LA  S   KP    ++     +TV+ + Q    V  +++  LL   
Sbjct: 179 TLFFSATMPPEIETLAN-SMLTKPEK--VEVTPASSTVDIISQQVYFVEKKEKKDLLIHL 235

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LK    + +++F  +  G    A +L    +    +HG + Q+ R      F       L
Sbjct: 236 LKDTSIESVLIFTRTKYGADKLARVLTKAGIGAEAIHGNKTQNARQRALTNFKNHTLRAL 295

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TD+AARG+D+  +  ++ Y+ P+ P+ Y+HR+GRT R  H  G AI F    E+ +L+
Sbjct: 296 IATDIAARGIDVDQLSHVINYELPNVPETYVHRIGRTGRAGH-EGVAISFCESEELPYLK 354

Query: 571 HLR 573
            ++
Sbjct: 355 DIQ 357

gb|AAH09304.2| DDX27 protein [Homo sapiens]
(769 aa)

Score: 218 bits (556), Expect: 3.78021e-55
Length: 399, Idn/Pos/Gap = 146/224/13 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 193 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 252

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA   + T  + +GG + +++   L 
Sbjct: 253 LIYKPRQAPV--TRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 310

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 311 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 370

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 371 TMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 427

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 428 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 487

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E 
Sbjct: 488 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA--GRAGRSVSLVGEDER 545

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 546 KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 584

dbj|BAD73793.1| putative DEAD box protein [Oryza sativa (japonica cultivar-group)]
dbj|BAD73664.1| putative DEAD box protein [Oryza sativa (japonica cultivar-group)]
(423 aa)

Score: 218 bits (556), Expect: 4.07501e-55
Length: 332, Idn/Pos/Gap = 127/186/14 (38%/56%/4%)

Query: 228 MGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAII 287
           MG+   T IQA  IP AL GRD++   +TGSGKT AF +PI++ L + +  P     A +
Sbjct:   1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRP--CFFACV  58

Query: 288 IAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLING---------TNILVA 338
           +APTRELA+QI      L S      ++V   ++R    E L  G          N  V 
Sbjct:  59 LAPTRELAIQIAKQFEALGSAISLQCSVVWWRSSRACLPEHLRKGFDSWQLWKERNSRVG 118

Query: 339 TPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQ 398
           TPGRLLDHL +T+GF F  L++LV+DEAD  L++ F++ + +IL ++PK R+T LFSAT 
Sbjct: 119 TPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATM 178

Query: 399 TTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKK 458
           T KV+ L +   +     + ++     + V+ L+Q   +VP++ +   L   L +     
Sbjct: 179 TEKVKKLRRACLKNP---VKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSM 235

Query: 459 IIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAAR 518
           I+VF+ +C   +  A +L  +    + + G+  Q KR      F  R+   L+CTDVA+R
Sbjct: 236 IMVFVRTCESTRLLALMLRNLRFKAISISGQMSQDKRLGALNRFRTRDCNILVCTDVASR 295

Query: 519 GLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           GLDI  VD ++ YD P   K+YIHRVGRTAR 
Sbjct: 296 GLDIQGVDVVINYDFPLNSKDYIHRVGRTARA 327

emb|CAI11913.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
(468 aa)

Score: 218 bits (556), Expect: 4.3563e-55
Length: 394, Idn/Pos/Gap = 135/217/18 (34%/55%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+SL LSE  ++  ++MG +R T +Q + IP  L GRD +  A+TGSGKT AF++P+++ 
Sbjct:   4 FESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +  T+  +L  
Sbjct:  64 LSEDPY----GVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSK 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             +++VATPGRL DH++S+       ++FL++DEADR LE G   F +++  IL  +P  
Sbjct: 120 KPHVVVATPGRLADHIRSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVPVK 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  ++ L  ++   +P     + +  V TV+ L Q F + P + +     
Sbjct: 180 RQTLLFSATLTDTLQQLQSIAMN-RPFFW--EHKSDVQTVKELDQRFILTPEKVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF   +    II+F ++C   +    +L   + P + LH   KQ +R +   +F  
Sbjct: 237 HLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
                L+ TDVAARGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G +I  +  
Sbjct: 297 NVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGVSITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +  +  L E+   ++++  I TQ+
Sbjct: 355 YDIHLINAIEEQNQTKLKEFPIEEKEVLKILTQV 388

ref|ZP_00148991.1| COG0513: Superfamily II DNA and RNA helicases [Methanococcoides burtonii DSM 6242]
gb|AAF89099.1| DEAD-box RNA helicase [Methanococcoides burtonii]
(522 aa)

Score: 218 bits (556), Expect: 4.50415e-55
Length: 340, Idn/Pos/Gap = 133/194/13 (39%/57%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L + +  LR IE+  F   TEIQ  AIPL L G+DI+  A TGSGKTLAF   I++ 
Sbjct:   4 FKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           + K      NG  A+++ PTRELA Q+   L + + H     A + GG     +  +L  
Sbjct:  64 IEKG-----NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQL-E 117

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
             +++VATPGRLLDH++  RG +    +  LV+DEADR L++GF +++ EI+   P  RQ
Sbjct: 118 RADVVVATPGRLLDHIE--RGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQ 175

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           TM+FSAT +  ++ L+   +   P  +   A       + L+Q +  VP + +F LL   
Sbjct: 176 TMMFSATVSKDIQYLSS-KYMNNPSKVFAKA---YVDSDKLKQVYIDVPKKMKFSLLVHL 231

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           LK  +   ++VF ++ + V F  + L   D+  + +HG   Q+KR ST  +F       L
Sbjct: 232 LKSEKSGLVMVFCNTRSNVDFVQKNLRKNDIDAIAIHGGHTQAKRKSTLSKFHSSNAHAL 291

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           +CTDVAARGLDIP V  +  +D PD+P EY+HR+GRTAR 
Sbjct: 292 VCTDVAARGLDIPHVSHVYNFDIPDDPSEYVHRIGRTARA 331

ref|NP_111822.1| Predicted RNA helicase (Superfamily II) [Thermoplasma volcanium GSS1]
(376 aa)

Score: 218 bits (555), Expect: 5.06225e-55
Length: 373, Idn/Pos/Gap = 134/215/16 (35%/57%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+   L    +  I   G++  TE+Q+ AIP+AL+G D++  ++TGSGKT A+LIPI+  
Sbjct:   7 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN  66

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
             K K     G  A+I+ PTRELA+Q+  V   L         +V GG +   + E ++ 
Sbjct:  67 TAKEK-----GIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILR 121

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           G NI+V TPGR LD +   RG + F+ + + V+DEAD  L++GF E++ +I+ +LP  RQ
Sbjct: 122 GANIIVGTPGRTLDLID--RGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQ 179

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           + LFSAT  +++ +LAK  F      L +  ++   TV G+   + +   E++ R LF++
Sbjct: 180 SFLFSATIPSEIIELAK-GFMHNEEILFLSKDE--VTVNGIDHNYAVSRRERKLRTLFSY 236

Query: 451 LKRNQRKKIIVFMSSCNGVKF-YAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           + + + +K I+F  +  G    Y  L+N+    V+ +HG   Q++R    + F +     
Sbjct: 237 IDKYKPEKSIIFSRTKAGANMIYEALINHGQDAVI-MHGDLTQAQREKALYRF-KNFGRF 294

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ T+VAARGLDI  +  I+ YD PD+P+ Y+HRVGRTAR +   GRA   +   E+G +
Sbjct: 295 LVATNVAARGLDIGGISDIINYDVPDDPRVYVHRVGRTAR-MGAAGRAFTIVEDREIGSI 353

Query: 570 QHLR-DAKVPLNE 581
             +R +A+V + E
Sbjct: 354 DMIRHEARVKMKE 366

dbj|BAB60468.1| ATP-dependent RNA helicase [Thermoplasma volcanium GSS1]
(373 aa)

Score: 218 bits (555), Expect: 5.41169e-55
Length: 373, Idn/Pos/Gap = 134/215/16 (35%/57%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+   L    +  I   G++  TE+Q+ AIP+AL+G D++  ++TGSGKT A+LIPI+  
Sbjct:   4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
             K K     G  A+I+ PTRELA+Q+  V   L         +V GG +   + E ++ 
Sbjct:  64 TAKEK-----GIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILR 118

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           G NI+V TPGR LD +   RG + F+ + + V+DEAD  L++GF E++ +I+ +LP  RQ
Sbjct: 119 GANIIVGTPGRTLDLID--RGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQ 176

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           + LFSAT  +++ +LAK  F      L +  ++   TV G+   + +   E++ R LF++
Sbjct: 177 SFLFSATIPSEIIELAK-GFMHNEEILFLSKDE--VTVNGIDHNYAVSRRERKLRTLFSY 233

Query: 451 LKRNQRKKIIVFMSSCNGVKF-YAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           + + + +K I+F  +  G    Y  L+N+    V+ +HG   Q++R    + F +     
Sbjct: 234 IDKYKPEKSIIFSRTKAGANMIYEALINHGQDAVI-MHGDLTQAQREKALYRF-KNFGRF 291

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ T+VAARGLDI  +  I+ YD PD+P+ Y+HRVGRTAR +   GRA   +   E+G +
Sbjct: 292 LVATNVAARGLDIGGISDIINYDVPDDPRVYVHRVGRTAR-MGAAGRAFTIVEDREIGSI 350

Query: 570 QHLR-DAKVPLNE 581
             +R +A+V + E
Sbjct: 351 DMIRHEARVKMKE 363

emb|CAI22427.1| OTTHUMP00000031249 [Homo sapiens]
emb|CAH70236.1| OTTHUMP00000031249 [Homo sapiens]
sp|Q96GQ7|DDX27_HUMAN Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27) (HSPC259) (PP3241)
(796 aa)

Score: 218 bits (555), Expect: 5.98159e-55
Length: 399, Idn/Pos/Gap = 146/224/13 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA   + T  + +GG + +++   L 
Sbjct: 280 LIYKPRQAPV--TRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 337

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 338 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 397

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 398 TMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 454

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 455 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 514

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E 
Sbjct: 515 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA--GRAGRSVSLVGEDER 572

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 573 KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 611

ref|NP_060365.6| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
(796 aa)

Score: 218 bits (554), Expect: 6.0317e-55
Length: 399, Idn/Pos/Gap = 146/224/13 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA   + T  + +GG + +++   L 
Sbjct: 280 LIYKPRQAPV--TRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 337

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 338 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 397

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 398 TMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 454

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 455 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 514

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E 
Sbjct: 515 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA--GRAGRSVSLVGEDER 572

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 573 KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 611

gb|AAH16060.2| DDX27 protein [Homo sapiens]
gb|AAH11927.2| DDX27 protein [Homo sapiens]
(767 aa)

Score: 218 bits (554), Expect: 6.0317e-55
Length: 399, Idn/Pos/Gap = 146/224/13 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 191 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 250

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA   + T  + +GG + +++   L 
Sbjct: 251 LIYKPRQAPV--TRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 308

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 309 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 368

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 369 TMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 425

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 426 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 485

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E 
Sbjct: 486 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA--GRAGRSVSLVGEDER 543

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 544 KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 582

emb|CAH78029.1| RNA helicase, putative [Plasmodium chabaudi]
(483 aa)

Score: 217 bits (552), Expect: 1.11838e-54
Length: 377, Idn/Pos/Gap = 133/209/20 (35%/55%/5%)

Query: 192 EHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDIL 251
           +  +E EQ + +S       F  L + E  L+ I+E+G+ + T IQ + +PL    RDI+
Sbjct:  86 DDTNENEQNEITS-------FSQLNICEEVLQSIKELGWEKPTLIQQKVLPLVFQKRDII 138

Query: 252 ASARTGSGKTLAFLIPIV-ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHH 310
             + TGSGKT  F+IPI+ EL YK     +    A+II+PTREL +QI      L S+  
Sbjct: 139 GLSETGSGKTACFIIPILQELKYK-----KQSFFALIISPTRELCIQIAQNAQALGSNLL 193

Query: 311 QTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCL 370
                + GG +  T++  L    NI+++TPGR+LDHL +T+GF  ++L++LV DEAD+ L
Sbjct: 194 INICTIFGGVDIVTQSLNLAKKPNIIISTPGRILDHLNNTKGFNLKNLKYLVFDEADKLL 253

Query: 371 EIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEG 430
            + FE  ++++L ILP  R T LFSAT T  V  L K S +     + I+     +TV+ 
Sbjct: 254 SLDFESSINKLLLILPNNRITFLFSATMTKSVAKLKKASLKNP---IKIEVSNKYSTVKT 310

Query: 431 LQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQ 490
           L + +  +P + ++  L +       K II+F ++C   +        + +  + LHGK 
Sbjct: 311 LIETYIFLPLKYKYTYLCSLCFYFTNKNIIIFTNTCATAQKLNFFCRNLGLKSICLHGKL 370

Query: 491 KQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            Q++R S+   F   ++  L+ T V ARGLD+  +  ++ +D     KEYIHRVGRTAR 
Sbjct: 371 TQNQRLSSLNLFKTNKYNILISTQVGARGLDLQNIKIVINFDLC-SCKEYIHRVGRTARA 429

Query: 551 VHGR-GRAILFLLPSEV 566
             G+ G++I F+   +V
Sbjct: 430 --GKTGKSITFVTQYDV 444

ref|NP_917703.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
(591 aa)

Score: 217 bits (552), Expect: 1.18565e-54
Length: 392, Idn/Pos/Gap = 132/223/23 (33%/56%/5%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           L+  RFD   +S  +L+ +++ G+ RMT++Q   +P+ L G+D+LA A+TG+GKT+AFL+
Sbjct: 123 LSDTRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLL 182

Query: 267 PIVELLY----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR 322
           P +E+L       +   R     +++ PTRELA+Q+      L  +H      V+ G  R
Sbjct: 183 PAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTR 242

Query: 323 RTEAEKLI----------NGTNILVATPGRLLDHLQSTRGFV--FEHLRFLVIDEADRCL 370
            T+ ++ +          N   ILVATPGRL DH+++T GF    + ++ LV+DEADR L
Sbjct: 243 LTQEQRSMQANPCQVVPMNYRQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLL 302

Query: 371 EIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEG 430
           ++GF  ++  I+  +PK RQT+LFSAT   +V  ++ ++ ++    +    +    T   
Sbjct: 303 DMGFRRDIERIIASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQ 362

Query: 431 LQQGFTIVPSEQRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDL 486
           + Q F I P +  F +L+  LK++  +    K+I+F ++    K  AE+L+ + + + ++
Sbjct: 363 VSQMFMIAPLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREI 422

Query: 487 HGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGR 546
           H ++ QS RT    EF +     L+ +DV+ARG+D P V  ++Q   P + ++YIHR+GR
Sbjct: 423 HSRKSQSARTKVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGR 482

Query: 547 TAR-GVHGRGRAILFLLPSEVGFLQHLRDAKV 577
           T R G  G+G  +L L P E  FL  ++D  +
Sbjct: 483 TGRKGKEGQG--LLLLAPWEKYFLSSIKDLSI 512

ref|NP_799900.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus RIMD 2210633]
dbj|BAC61733.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus RIMD 2210633]
(522 aa)

Score: 217 bits (552), Expect: 1.31051e-54
Length: 374, Idn/Pos/Gap = 133/213/6 (35%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS P L+ I+E G+   + IQA+AIP  L G+D++A+A+TG+GKT  F +PI+E 
Sbjct:   3 FTSLGLSAPILKAIQEKGYDTPSPIQAKAIPAILEGKDVMAAAQTGTGKTAGFTLPILER  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L     +  N   A+I+ PTRELA Q+   +     H   + A+V GG     +  +L  
Sbjct:  63 LSNGPRVRANQVRALILTPTRELAAQVQENVFMYGRHLPLSSAVVFGGVKINPQMLRLRK 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++LVATPGRL+D L +     F+ L  LV+DEADR L++GF  ++ +IL +LPK RQ 
Sbjct: 123 GADVLVATPGRLMD-LYNQNAVKFDQLEVLVLDEADRMLDMGFIRDIRKILALLPKQRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + ++ DLAK      P+ + ++     +T   ++Q       +++  +L   +
Sbjct: 182 LLFSATFSDEIRDLAK-GLVNNPVEISVNPAN--STARTVEQSIYPADVKKKAPMLVKLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K    K+++VF  + +G    A+ L   ++P   +HG + Q  RT    +F   E   L+
Sbjct: 239 KDGDWKQVLVFTKTKHGANRLAKFLIEQNLPAAAIHGNKSQGARTKALADFKSGEIRVLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLL-PSEVGFL 569
            TD+AARG+DIP +  +V ++ P   ++Y+HR+GRT R G  G+  +++  L  SE+  +
Sbjct: 299 ATDIAARGIDIPQLPQVVNFELPKVAEDYVHRIGRTGRAGEVGKAISLVCALEASELFAI 358

Query: 570 QHLRDAKVPLNEYE 583
           + L    +P  E E
Sbjct: 359 ERLIQEVLPRKELE 372

gb|EAA73496.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
ref|XP_384204.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
(486 aa)

Score: 216 bits (551), Expect: 1.35498e-54
Length: 455, Idn/Pos/Gap = 153/237/14 (33%/52%/3%)

Query: 145 LQNAAARTPADEEVASSRATVHEMEPLARPCPEVTQKSSPALQSLSSEHASEQEQPKPSS 204
           +  A  R  A +   +++    E    A P P   ++S     +L    A E     P  
Sbjct:   1 MNGAKRRKVAQDTPRNTKPVAQEKPARAEPKPSSDEESEEESATLEEPSAEETAVDAPKK  60

Query: 205 GLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAF 264
                  F  L +++      E++ +   T IQ ++IP+AL GRDI+  A TGSGKT AF
Sbjct:  61 ------TFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAF 114

Query: 265 LIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRT 324
            +P+++ L   K  P  G   +++APTRELA QI      L S      A+++GG +   
Sbjct: 115 ALPVLQALLD-KPQPLFG---LVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVP 170

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           +A  L    +I+VATPGRL+DHL+ T+GF    L++L++DEADR L++ F   + +IL+ 
Sbjct: 171 QAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKILKF 230

Query: 385 LPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRF 444
           +P+ R+T LFSAT ++K+E L + S +  P+ + I + +   TV  L Q +  +P  Q+ 
Sbjct: 231 VPRERRTYLFSATISSKIESLQRASLRD-PVKVSISSNK-YQTVSTLLQNYLFIPHPQKD 288

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             L   +  +  +  IVF  +    +  + LL  +    + LHG+  QS R     +F  
Sbjct: 289 VHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGALNKFRS 348

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
                L+ TDVAARGLDIP+VD ++ YD P + K YIHRVGRTAR     G AI  +   
Sbjct: 349 GTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKS-GVAISLVTQY 407

Query: 565 EVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQLEK 598
           ++     +  A    L EY   KE++   Q+++E+
Sbjct: 408 DLEIYLRIEAALGKKLAEYPTEKEEVMAFQSRVEE 442

gb|AAS50325.1| AAL041Cp [Ashbya gossypii ATCC 10895]
ref|NP_982501.1| AAL041Cp [Eremothecium gossypii]
(487 aa)

Score: 216 bits (551), Expect: 1.46065e-54
Length: 376, Idn/Pos/Gap = 141/198/12 (37%/52%/3%)

Query: 177 EVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEI 236
           E +Q +  A  +  +E A  +E  +P  G  +    D +P     +   + + F + T I
Sbjct:  36 EESQATEEANTASETEAAVIEETAEPEEGFSSFRELDLVP---ELIEACDNLNFTKPTPI  92

Query: 237 QARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAM 296
           Q++AIP AL G+DI+  A+TGSGKT AF IPI+  L    W  +    A I+APTRELA 
Sbjct:  93 QSKAIPPALQGKDIIGLAQTGSGKTAAFAIPILNRL----WHDQQPYYACILAPTRELAQ 148

Query: 297 QIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQ-STRGFVF 355
           QI      L S        ++GG N   +A  L+   +I++ATPGRL+DHL+   RGF  
Sbjct: 149 QIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLEVHKRGFAL 208

Query: 356 EHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQTMLFSATQTTKVEDLAKVSFQQKP 414
              +FLV+DEADR L + F   +  IL+ +P K R T LFSAT T+K++ L + S     
Sbjct: 209 RKQQFLVMDEADRLLNMKFGPVLDRILKNIPTKVRTTYLFSATMTSKIDKLQRASLTNT- 267

Query: 415 LHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAE 474
             +         TV+ L Q   +VP   +   L   L     K  IVF  +    +  + 
Sbjct: 268 --VKCAVSNKYQTVDTLVQTLIVVPGGLKNTFLIYLLNEFIGKTTIVFTRTKANAERISG 325

Query: 475 LLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPP 534
           L N ++     LHG   Q++RT     F   + + L+ TDVAARGLDIP+VD ++ YD P
Sbjct: 326 LCNLLEFSATALHGDLNQNQRTGALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIP 385

Query: 535 DEPKEYIHRVGRTARG 550
            + K YIHRVGRTAR 
Sbjct: 386 VDSKSYIHRVGRTARA 401

emb|CAG31463.1| hypothetical protein [Gallus gallus]
(758 aa)

Score: 216 bits (551), Expect: 1.64164e-54
Length: 399, Idn/Pos/Gap = 147/225/13 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  +GF + T IQ   IP+ L G+DI A A TG+GKT AF++P++E 
Sbjct: 182 FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER 241

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA     T  + +GG + +T+   L 
Sbjct: 242 LIYKPRQAPI--TRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALR 299

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +G +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+  + RQ
Sbjct: 300 SGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSRHRQ 359

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P  + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 360 TMLFSATMTEEVKDLASVSLKN-PTRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 416

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 417 SALLTRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQI 476

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E 
Sbjct: 477 DILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARA--GRAGRSVSLVGEEER 534

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++E L +  Y
Sbjct: 535 KMLKEIVKAAKTPVKARILPQDVILKFREKIENLEKDVY 573

ref|NP_001006293.1| similar to Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27) (HSPC259) (PP3241) [Gallus gallus]
(758 aa)

Score: 216 bits (551), Expect: 1.64164e-54
Length: 399, Idn/Pos/Gap = 147/225/13 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  +GF + T IQ   IP+ L G+DI A A TG+GKT AF++P++E 
Sbjct: 182 FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER 241

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA     T  + +GG + +T+   L 
Sbjct: 242 LIYKPRQAPI--TRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALR 299

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +G +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+  + RQ
Sbjct: 300 SGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSRHRQ 359

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P  + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 360 TMLFSATMTEEVKDLASVSLKN-PTRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 416

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 417 SALLTRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQI 476

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E 
Sbjct: 477 DILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARA--GRAGRSVSLVGEEER 534

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++E L +  Y
Sbjct: 535 KMLKEIVKAAKTPVKARILPQDVILKFREKIENLEKDVY 573

emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
pir||T51310 RNA helicase RH28 [imported] - Arabidopsis thaliana
ref|NP_193396.3| DEAD/DEAH box helicase, putative (RH28) [Arabidopsis thaliana]
(789 aa)

Score: 216 bits (550), Expect: 2.05644e-54
Length: 510, Idn/Pos/Gap = 174/264/30 (34%/51%/5%)

Query: 190 SSEHASEQEQPKPSSGLLTPHRFDS-----LPLSEPTLRGIEEMGFARMTEIQARAIPLA 244
           ++E+  E   PKP    +    F +     L LS P LR  E +G+ + T IQA  IPLA
Sbjct: 142 AAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLA 201

Query: 245 LSGRDILASARTGSGKTLAFLIPIVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLH 303
           L+GRD+ ASA TGSGKT AF +P +E LL++ K +    T  +I+ PTRELA+QI  ++ 
Sbjct: 202 LTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV--FATRVLILTPTRELAVQIHSMIQ 259

Query: 304 DLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVI 363
           +LA        +++GG + R +   L +  +I+VATPGR++DHL+++     + L  L++
Sbjct: 260 NLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLIL 319

Query: 364 DEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGID--A 421
           DEADR L+ GF  E+ E++R+ PK RQTMLFSAT T +V++L K+S   KPL L  D  A
Sbjct: 320 DEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSL-NKPLRLSADPSA 378

Query: 422 EQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDV 481
            +P    E + +      + Q   +L +   R  + K+I+F  +         L     +
Sbjct: 379 RRPPGLTEEVVRIRRTREANQE-AVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGL 437

Query: 482 PVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYI 541
              +LHG   Q++R  +   F ++E   L+ TDVAARGLDI  V  ++ Y  P E   Y+
Sbjct: 438 KAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYV 497

Query: 542 HRVGRTARGVHGR-GRAILFLLPSEVGFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKL 599
           HRVGRTAR   GR G A+ F+  S+   L+ + +     L     P++ +    +Q+   
Sbjct: 498 HRVGRTARA--GREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIVK-WSQIIDE 554

Query: 600 VEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLER 659
           +E  Y    SA    R+  +A    +  +    H  +I A  K   F         + E+
Sbjct: 555 MEDQYSAVISAERDERALRKAEMEFAKAENMLEHRDEIYARPKRTWF---------MTEK 605

Query: 660 AKKI----RRRGGGGGFGDEWKNRDRLKDL 685
            KK+     +   G   G E  + DR +DL
Sbjct: 606 EKKLVAQAEKDSAGNPAGGELVSADRAEDL 635

gb|EAA54432.1| hypothetical protein MG02417.4 [Magnaporthe grisea 70-15]
ref|XP_365715.1| hypothetical protein MG02417.4 [Magnaporthe grisea 70-15]
(636 aa)

Score: 216 bits (549), Expect: 2.38969e-54
Length: 485, Idn/Pos/Gap = 160/247/52 (32%/50%/10%)

Query: 216 PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLYK 274
           PL++  L  +  MGF  +T +QA  +PL    +D++  A TGSGKTLA+LIPI++ +L +
Sbjct:  20 PLADFILEAVASMGFNELTPVQAATLPLFRGNKDVVVEAVTGSGKTLAYLIPIIDKILRR  79

Query: 275 AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI--VMGGANRRTEA------ 326
              + R+  GAII++PTRELA QI  VL  L S H  +      + G  +R +       
Sbjct:  80 DDVLKRHHVGAIIVSPTRELATQIHSVLSSLISFHAPSAEFSSFLKGDEKRPDTIVPVLI 139

Query: 327 -EKLINGT---------------NILVATPGRLLDHLQS----TRGFVFEHLRFLVIDEA 366
            + L+ GT               NILV TPGRL + L S    T    FE    LV+DEA
Sbjct: 140 PQLLVGGTVKVAQDLSTFLRLSPNILVGTPGRLSELLSSPYVHTPQSSFE---VLVLDEA 196

Query: 367 DRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPV- 425
           DR L+ GF++E+  IL  LPK R+T LFSA+ +  V +L +   +  P  + +  ++   
Sbjct: 197 DRLLDQGFQKELQRILGFLPKQRRTGLFSASVSDAVGELVRAGLRN-PQRIAVTVKRLTD 255

Query: 426 -------ATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK--KIIVFMSSCNGVKFYAELL 476
                   T   LQ  +  VP+ Q++  L  FL++ +    + I+F+SSC  VK++  ++
Sbjct: 256 GGVIEDRKTPASLQMSYLSVPASQKWPALIQFLRKVEPTPLRTIIFVSSCFAVKYFHAVI 315

Query: 477 NYI---DVPVLDLHGKQKQSKRTSTFFEF-ARREHATLLCTDVAARGLDIPAVDWIVQYD 532
             +   DV ++ LHGKQ+   R   F  F      + LL TDVAARGLDIP VD + Q+D
Sbjct: 316 ASLLPKDVSLIPLHGKQEPQVREKCFDRFVGSSSPSILLTTDVAARGLDIPQVDVVFQFD 375

Query: 533 PPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLAD- 591
           PP +PK ++HR GR  R         L L   E  ++  L   K P+     P+ K++D 
Sbjct: 376 PPSDPKTFVHRAGRAGRAGRRGLAVALLLPGREQDYVGFLEVRKTPITPLTNPEIKVSDE 435

Query: 592 ----IQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFS 647
                  Q+ K    +  + + ++  F S+ ++Y  H    +F + ++D    A+ +G  
Sbjct: 436 EVKLFAAQVRKQATADREVFQLSQRAFVSWARSYIEHKATSIFRITDVDWLDTAQGWGLV 495

Query: 648 APPRI 652
             P++
Sbjct: 496 TLPKM 500

dbj|BAD97014.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 variant [Homo sapiens]
(483 aa)

Score: 216 bits (549), Expect: 2.47079e-54
Length: 394, Idn/Pos/Gap = 141/217/18 (35%/55%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +    ++G  + T +Q   IP+ L GRD L  A+TGSGKT AF++PI++ 
Sbjct:   4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPVILEGRDCLGCAKTGSGKTAAFVLPILQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +   +A +L  
Sbjct:  64 LSEDPY----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSR 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             ++++ATPGRL DHL+S+  F  + +RFLV+DEADR LE G   F  ++  IL  +P  
Sbjct: 120 KPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPAR 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQT+LFSAT T  + +L  ++  Q P     +A+ PV+TVE L Q + +VP + +   L 
Sbjct: 180 RQTLLFSATLTDTLRELQGLATNQ-PFFW--EAQAPVSTVEQLDQRYLLVPEKVKDAYLV 236

Query: 449 TFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             ++R Q +     II+F ++C   +    +L     P + LH   KQ +R +   +F  
Sbjct: 237 HLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
             +  L+ TDVA+RGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G+AI  +  
Sbjct: 297 SIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRQGQAITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +  K  L E+   + ++  I TQ+
Sbjct: 355 YDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQV 388

ref|XP_534451.1| PREDICTED: similar to Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27) (HSPC259) (PP3241) [Canis familiaris]
(735 aa)

Score: 216 bits (549), Expect: 2.49149e-54
Length: 399, Idn/Pos/Gap = 146/224/13 (36%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 162 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 221

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA   + T  + +GG + +++   L 
Sbjct: 222 LIYKPRQSPV--TRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEAALR 279

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 280 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 339

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 340 TMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFVRIRPNREGDREAIV 396

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 397 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 456

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E 
Sbjct: 457 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA--GRAGRSVSLVGEEER 514

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 515 KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 553

emb|CAA34272.1| unnamed protein product [Saccharomyces cerevisiae]
sp|P25808|SPB4_YEAST ATP-dependent rRNA helicase SPB4
ref|NP_116654.1| Putative ATP-dependent RNA helicase, nucleolar protein required for synthesis of 60S ribosomal subunits at a late step in the pathway; sediments with 66S pre-ribosomes in sucrose gradients [Saccharomyces cerevisiae]
dbj|BAA09238.1| rRNA helicase [Saccharomyces cerevisiae]
(606 aa)

Score: 216 bits (549), Expect: 2.66348e-54
Length: 461, Idn/Pos/Gap = 147/239/37 (31%/51%/8%)

Query: 220 PTLR-GIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKW- 277
           P +R G++ MGF  MT +QA  IP+    +D++  + TGSGKT AF+IP++E + K +  
Sbjct:  16 PWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEKVVKEEAN  75

Query: 278 ---MPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ----TRAIVMGGANRRTEAEK-- 328
                +    ++IIAPTREL+ QI  V+     H+       +  ++ G N  T  +   
Sbjct:  76 TSKFKKAHFHSLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVS 135

Query: 329 --LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
             L N   IL+ TPGR+LD LQ            +V+DEADR L++ F ++  +ILR+LP
Sbjct: 136 NFLRNRPQILIGTPGRVLDFLQMP-AVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLP 194

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K R+T LFSAT  +   D+ K   +  P+ + ++++    +   L+  + +V   ++ +L
Sbjct: 195 KQRRTGLFSATMRSAGSDIFKTGLRN-PVRITVNSKNQAPS--SLKLNYCVVNPAEKLQL 251

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--------DVPVLDLHGKQKQSKRTST 498
           L + L   + KK IV+  +C  V ++   + Y+        +V +  LHGK + S RT T
Sbjct: 252 LVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLGKRNILVNEVEIFSLHGKLQTSARTKT 311

Query: 499 FFEFARR-EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
              F     ++ L  TDVAARG+DIP VD ++Q DPP     ++HR GRT R  +  G+A
Sbjct: 312 LTAFTDSLSNSVLFTTDVAARGIDIPDVDLVIQLDPPTNTDMFMHRCGRTGRA-NRVGKA 370

Query: 558 ILFLLPS-EVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSAR----- 611
           I FL    E  F+  ++   V L E +    ++  I T   +    N+ L+   R     
Sbjct: 371 ITFLNEGREEDFIPFMQVKNVELEELDL---EVKGITTNFYEDFR-NWILEDRDRFDKGV 426

Query: 612 DGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
             + ++++ Y++HS   +F +  LD   +AK +G    PR+
Sbjct: 427 KAYVAFIKYYSNHSATSIFRLQSLDYVGIAKLYGLFRLPRM 467

gb|AAK95821.1| RNA helicase-like protein [Homo sapiens]
(796 aa)

Score: 216 bits (549), Expect: 2.7083e-54
Length: 399, Idn/Pos/Gap = 146/223/13 (36%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA   + T  + +GG + +++   L 
Sbjct: 280 LIYKPRQAPV--TRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 337

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 338 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 397

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 398 TMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 454

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 455 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 514

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y HRVGRTAR   GR GR++  +   E 
Sbjct: 515 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYDHRVGRTARA--GRAGRSVSLVGEDER 572

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 573 KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 611

dbj|BAB14343.1| unnamed protein product [Homo sapiens]
(765 aa)

Score: 216 bits (549), Expect: 2.75387e-54
Length: 399, Idn/Pos/Gap = 146/223/13 (36%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 189 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 248

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L+YK +  P   T  +++ PTREL +Q+  V   LA   + T  + +GG + +++   L 
Sbjct: 249 LIYKPRQAPV--TRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 306

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+    RQ
Sbjct: 307 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 366

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLL 447
           TMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++
Sbjct: 367 TMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIV 423

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L R     +++F  +         LL  + + V +LHG   Q++R      F   + 
Sbjct: 424 AALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQI 483

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             L+ TDVAARGLDI  V  ++ +  P+  K Y HRVGRTAR   GR GR++  +   E 
Sbjct: 484 DILVATDVAARGLDIEGVKTVINFTMPNTIKHYDHRVGRTARA--GRAGRSVSLVGEDER 541

Query: 567 GFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
             L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 542 KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 580

emb|CAH01705.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_452854.1| unnamed protein product [Kluyveromyces lactis]
(487 aa)

Score: 216 bits (549), Expect: 2.80021e-54
Length: 389, Idn/Pos/Gap = 141/204/14 (36%/52%/3%)

Query: 169 EPLARPCPEVTQKSSPALQSLSSEHASE------QEQPKPSSGLLTPHRFDSLPLSEPTL 222
           E + R   E  Q++     S S E +++          +P         F  L L    +
Sbjct:  20 EKIKRKALEKQQQAHANEPSPSDEDSAQSNSKDSNSNEQPEESEEIFESFTELDLVPELI  79

Query: 223 RGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNG 282
              + + + + T IQ++AIP AL G DI+  A+TGSGKT AF IPI+  L    W  +  
Sbjct:  80 EACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQL----WHDQQP 135

Query: 283 TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGR 342
             A I+APTRELA QI      L S        ++GG +   +A  L+   +I++ATPGR
Sbjct: 136 YYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARDLMRKPHIIIATPGR 195

Query: 343 LLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTRQTMLFSATQTTK 401
           L+DHL++T+GF    L++LV+DEADR L++ F   +  IL I+P + R T LFSAT T+K
Sbjct: 196 LMDHLENTKGFNLRKLKYLVMDEADRLLDMEFGPVLDRILNIIPTQGRTTYLFSATMTSK 255

Query: 402 VEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIV 461
           ++ L + S    P+   +  +    TV+ L Q   +VP   +   L   L     K  IV
Sbjct: 256 IDKLQRASLTN-PVKCAVSNK--YQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKSTIV 312

Query: 462 FMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLD 521
           F  +    +  + L N ++     LHG   Q++RT     F   + + L+ TDVAARGLD
Sbjct: 313 FTRTKANAERISNLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLD 372

Query: 522 IPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           IP+VD ++ YD P + K YIHRVGRTAR 
Sbjct: 373 IPSVDIVINYDIPVDSKSYIHRVGRTARA 401

ref|YP_205173.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
gb|AAW86285.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
(398 aa)

Score: 215 bits (548), Expect: 3.78131e-54
Length: 351, Idn/Pos/Gap = 126/204/6 (35%/58%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+P L+ I+E+G+   T IQ +AIP+AL+G++++A+A+TG+GKT +F++PI+E+
Sbjct:   3 FSKLGLSDPILKAIDELGYKAPTPIQQKAIPVALTGKNLIAAAQTGTGKTASFVLPILEI  62

Query: 272 LYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L +     R     A+I+ PTRELA+Q+   +   + H   T   + GG + + + ++LI
Sbjct:  63 LSEDPTKVRAKRIRALILTPTRELAIQVEENIQQYSKHIDITSLAMYGGVDYKEQKQRLI 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++LVATPGRLLD + + R   F+ L  LV+DEADR L++GF E++++I+  LP  RQ
Sbjct: 123 EGVDVLVATPGRLLD-MYTQRAIHFDELDILVLDEADRMLDMGFIEDINKIIERLPLDRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
            MLFSAT + +V  LAK +    P+ + I  +    +   + Q  T V  +++  LL   
Sbjct: 182 NMLFSATLSDQVRYLAKTAINN-PIEISISPK--TTSSPQIDQWLTTVDKDKKSALLSHL 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +K N   + ++F+ + +G       L   D+     H  + Q  R     +F   +   L
Sbjct: 239 IKENNWNQALIFIETKHGAAKLVSQLEKRDIRAEAFHSGRSQEARAKVLNDFKEGKLQYL 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFL 561
           + T +AARG+DI  +  +V YD P    +Y+HR+GRT R    +G AI F+
Sbjct: 299 VATGIAARGIDIDELTRVVNYDLPFPADDYVHRIGRTGRA-GAKGEAISFV 348

gb|EAA20538.1| DEAD/DEAH box helicase, putative [Plasmodium yoelii yoelii]
(517 aa)

Score: 215 bits (547), Expect: 3.90964e-54
Length: 377, Idn/Pos/Gap = 130/210/18 (34%/55%/4%)

Query: 191 SEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDI 250
           +E  ++ EQ + +S       F+ L + E  L+ I+E+G+ + T IQ + +P+    RDI
Sbjct:  96 NETGNDAEQNEITS-------FEQLNICEEVLQSIKELGWEKPTLIQQKVLPIVFQKRDI 148

Query: 251 LASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHH 310
           +  + TGSGKT  F+IPI++ L     + +    A+II+PTREL +QI      L S+  
Sbjct: 149 IGLSETGSGKTACFIIPILQELK----IKKQSFFALIISPTRELCIQIAQNAQALGSNLL 204

Query: 311 QTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCL 370
                + GG +  T++  L    NI++ TPGR+LDHL +T+GF  ++L++L+ DEAD+ L
Sbjct: 205 INICTIFGGVDIVTQSLNLAKKPNIIIGTPGRILDHLNNTKGFNLKNLKYLIFDEADKLL 264

Query: 371 EIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEG 430
            + FE  ++++L ILPK R T LFSAT T  V  L K S +  P+   I      +TV+ 
Sbjct: 265 SLDFESSINKLLLILPKNRITFLFSATMTKSVSKLKKASLKN-PIQ--IQVSNKYSTVKT 321

Query: 431 LQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQ 490
           L + +  +P + ++  L +       K II+F ++C   +        + +  + LHGK 
Sbjct: 322 LIETYIFLPLKYKYTYLCSLCFYFTNKNIIIFSNTCATAQKLNFFCRNLGLKSICLHGKL 381

Query: 491 KQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            Q++R S+   F   ++  L+ T V ARGLD+  +  ++ +D     KEYIHRVGRTAR 
Sbjct: 382 TQNQRLSSLNLFKTNKYNILISTQVGARGLDLKNIKIVINFDLC-SCKEYIHRVGRTARA 440

Query: 551 VHGR-GRAILFLLPSEV 566
             G+ G++I F+   +V
Sbjct: 441 --GKTGKSITFVTQYDV 455

ref|NP_967326.1| putative ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
emb|CAE77980.1| putative ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
(412 aa)

Score: 215 bits (547), Expect: 4.04232e-54
Length: 352, Idn/Pos/Gap = 126/203/7 (35%/57%/1%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F+   LSE  LR + + GF R T+IQ +AIP  L G D+LA A+TG+GKT AF IPI+ 
Sbjct:   2 KFEKFHLSEDLLRNLTDNGFFRTTDIQYKAIPSILKGEDVLAIAQTGTGKTAAFAIPIIN  61

Query: 271 LLYKAKWMPRN-GTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           +++  K   R  G   +I+ PTRELA QI  V + L+ H       + GG  +  + +KL
Sbjct:  62 MIHTEKSSKRAIGIKCLILVPTRELAQQIGEVFNKLSKHTKVKPFALFGGVEQDAQIQKL 121

Query: 330 INGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
            +G +IL++TPGR+ D +   +G V    +  LV+DEAD  L++GF +++  + R L K 
Sbjct: 122 QDGIDILISTPGRMFDLI--AQGHVDISRIETLVLDEADHMLDLGFIDDITSVKRKLTKR 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
            QT+ FSAT   +++ LA    +   + + I  E PV+  + +      V  + +   L 
Sbjct: 180 HQTLFFSATINPEIKKLAFSQVRSSAIRIQISPEDPVS--KNITHFVMHVEMDDKRFFLA 237

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
            +L++N   K I+F+ +    +  A+ L  ++V  L LHG++ Q+ R      F + +  
Sbjct: 238 EYLRQNPDGKFIIFVRTRVRAERVAKALARVEVQSLTLHGEKDQTDRAEVMKTFRKGDCK 297

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILF 560
            L+ TD++ARG+DIP V  ++ YD P++P+ Y+HR+GRT RG + +G A+ F
Sbjct: 298 ILIATDLSARGIDIPDVTHVINYDLPEKPENYVHRIGRTGRGFN-KGVAVSF 348

ref|ZP_00262779.1| COG0513: Superfamily II DNA and RNA helicases [Pseudomonas fluorescens PfO-1]
(446 aa)

Score: 215 bits (547), Expect: 4.07619e-54
Length: 359, Idn/Pos/Gap = 136/200/6 (37%/55%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +L L EP LR +E++G+   T +QA+AIP+ L+GRD++A+A+TG+GKT  F +P+++L
Sbjct:   3 FATLGLIEPLLRSLEKLGYQTPTPVQAQAIPVVLAGRDLMAAAQTGTGKTAGFALPLLQL  62

Query: 272 L-YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L  +   +  N   A+I+ PTRELA Q+   +   A +       V GG +   +  KL 
Sbjct:  63 LAMEGPKVTANSVRALILVPTRELAEQVHEAVRQYAENLPLRTYAVYGGVSINPQMMKLR 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++LVATPGRLLD L       F  L+ LV+DEADR L++GF EE+  I R LPK RQ
Sbjct: 123 GGVDLLVATPGRLLD-LFRQNALKFNQLQTLVLDEADRMLDLGFSEELANIYRALPKKRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT +  +  LA       P  + +      A    ++Q    V  +++  L    
Sbjct: 182 TLLFSATFSDDIRLLAG-QMLNDPQSIEVSPRNVAANT--VKQWVVTVDKKRKPELFVHL 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +++N+ K+++VF  + NGV    E L  + V    +HG + Q+ R      F   E   L
Sbjct: 239 MRKNKWKQVLVFAKTRNGVDALVEKLQGLGVNADGIHGDKPQATRQRALDRFKLSEVQIL 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           + TDVAARGLDI  +  +V +D P   ++YIHR+GRT R     G AI  +   EV  L
Sbjct: 299 VATDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRA-GSTGEAISLVCADEVNML 356

dbj|BAB13421.1| KIAA1595 protein [Homo sapiens]
(471 aa)

Score: 215 bits (547), Expect: 4.93854e-54
Length: 385, Idn/Pos/Gap = 135/213/20 (35%/55%/5%)

Query: 334 NILVATPGRLLDHLQ-STRGF----VFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           NI+VATPGRL D  +    G         L  LV+DEADR L++GFE  ++ IL  LPK 
Sbjct:   7 NIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQ  66

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHL-----GIDAEQPVATVEGLQQGFTIVPSEQR 443
           R+T LFSATQT +VE+L +   +  P+ +     G+ A     T   L+  + +  ++++
Sbjct:  67 RRTGLFSATQTQEVENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEK 125

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFE 501
           F  L  FL+ ++++K +VF S+C  V++Y + L  +   V ++ +HGK K  KR   F E
Sbjct: 126 FNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY-KRNKIFME 184

Query: 502 FARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFL 561
           F + +   L+CTDV ARG+DIP V+W++QYDPP     ++HR GRTAR  HG G A++FL
Sbjct: 185 FRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG-GSALVFL 243

Query: 562 LPSEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQA 620
           LP E  ++  L  + K PL E + P+   AD+  +L+ +   +  + +     F SY+QA
Sbjct: 244 LPMEESYINFLAINQKCPLQEMK-PQRNTADLLPKLKSMALADRAVFEKGMKAFVSYVQA 302

Query: 621 YASHSMKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRGGGGGFGDEWKNRD 680
           YA H    +F + +LD A++A+ F     P++      R K+           D    +D
Sbjct: 303 YAKHECNLIFRLKDLDFASLARGFALLRMPKM---PELRGKQFPDFVPVDVNTDTIPFKD 359

Query: 681 RLKDLIRKRLASGQRFRASNPHGKR 705
           ++++  R++L   QR   +   G+R
Sbjct: 360 KIREKQRQKLLEQQRREKTENEGRR 384

gb|AAH02674.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapiens]
gb|AAB81544.1| R27090_2 [Homo sapiens]
ref|NP_061943.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapiens]
(483 aa)

Score: 215 bits (547), Expect: 5.06372e-54
Length: 394, Idn/Pos/Gap = 141/216/18 (35%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +    ++G  + T +Q   IP  L GRD L  A+TGSGKT AF++PI++ 
Sbjct:   4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +   +A +L  
Sbjct:  64 LSEDPY----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSR 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             ++++ATPGRL DHL+S+  F  + +RFLV+DEADR LE G   F  ++  IL  +P  
Sbjct: 120 KPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPAR 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQT+LFSAT T  + +L  ++  Q P     +A+ PV+TVE L Q + +VP + +   L 
Sbjct: 180 RQTLLFSATLTDTLRELQGLATNQ-PFFW--EAQAPVSTVEQLDQRYLLVPEKVKDAYLV 236

Query: 449 TFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             ++R Q +     II+F ++C   +    +L     P + LH   KQ +R +   +F  
Sbjct: 237 HLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
             +  L+ TDVA+RGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G+AI  +  
Sbjct: 297 SIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRQGQAITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +  K  L E+   + ++  I TQ+
Sbjct: 355 YDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQV 388

emb|CAG31485.1| hypothetical protein [Gallus gallus]
(402 aa)

Score: 215 bits (547), Expect: 5.06372e-54
Length: 394, Idn/Pos/Gap = 139/213/18 (35%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L+   +    +MG +R T +QA  IP  L GRD L  A+TGSGKT AF++P++++
Sbjct:   4 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQV  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         +V+GG +   +A +L  
Sbjct:  64 LSEDPY----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSR 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             ++++ATPGRL DHL+S+  F  + L+FLV+DEADR LE G   F  ++  IL  +P  
Sbjct: 120 KPHVVIATPGRLADHLRSSNTFSLKKLKFLVLDEADRLLEQGCADFIADLEVILEAVPAR 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  + +L  ++   +P     +A   V TV+ L Q + +VP   +     
Sbjct: 180 RQTLLFSATLTDTLNELKSLAMN-RPFFW--EAASEVRTVDELDQRYLLVPEAVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF   ++   II+F  +C   +    +L     P + LH   KQ +R +   +F  
Sbjct: 237 HLIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
                L+ TDVAARGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G +I  +  
Sbjct: 297 SIFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGISITMVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +  K+ L E+   ++ + DI T +
Sbjct: 355 YDIHLVHAIEEEIKLKLQEFSVEEKLVLDILTHV 388

emb|CAC33024.1| hypothetical protein [Takifugu rubripes]
(476 aa)

Score: 214 bits (545), Expect: 6.83787e-54
Length: 384, Idn/Pos/Gap = 131/206/16 (34%/53%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS+  ++  +++G  + T +Q   +P  L G D +  A+TGSGKT AF++P+++ 
Sbjct:   4 FSSLGLSDWLIKQCKQLGIQKATPVQENCVPAILQGSDCMGCAKTGSGKTAAFVLPVLQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTR LA QI      L         I++GG    T+A +L N
Sbjct:  64 LSEDPY----GIFCLVLTPTRSLAYQIAEQFRVLGKPLGLKDCIIVGGMGMVTQALELSN 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             +++VATPGRL DH++S+  F    ++FLV+DEADR LE G   F +++  IL  +P  
Sbjct: 120 QPHVVVATPGRLADHIRSSSTFSLAKIQFLVMDEADRLLEQGCTDFTKDLETILTAVPAK 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  +++L  ++   KP     +++    TVE L Q + + P + +     
Sbjct: 180 RQTLLFSATLTDTLQELKHIAMN-KPFFW--ESKSECRTVEELDQRYILTPEKVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF  ++    II+F S+C   +    +L     P + LH   KQ +R +   +F  
Sbjct: 237 HLIQTFTDQHDDWSIIIFTSTCKYCQILTMMLQKFHFPTISLHSMMKQVQRFANLAKFKA 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
             +  L+ TDVAAR LDIP V  ++  + P  PK YIHRVGRTAR   G G +I  +   
Sbjct: 297 SVYKILIATDVAARCLDIPTVQVVITNNTPGLPKIYIHRVGRTARA--GNGVSITLVTQY 354

Query: 565 EVGFLQHLRDAKVPLNEYEFPKEK 588
           ++  +  + +        EFP E+
Sbjct: 355 DIHLVHSIEEQIRETKLKEFPVEE 378

gb|EAA74503.1| hypothetical protein FG10896.1 [Gibberella zeae PH-1]
ref|XP_391072.1| hypothetical protein FG10896.1 [Gibberella zeae PH-1]
(637 aa)

Score: 214 bits (544), Expect: 1.06408e-53
Length: 505, Idn/Pos/Gap = 164/255/58 (32%/50%/11%)

Query: 198 EQPKPSSGLLTPHRFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASAR 255
           E+PK  S    P  +D+L  PLSE     +  MGF +MT +QA  +P  +  +D++  A 
Sbjct:   4 EKPKKRS----PRAWDTLNPPLSEWIRDAVATMGFDQMTPVQAATLPHFMGNKDVVVEAV  59

Query: 256 TGSGKTLAFLIPIVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRA 314
           TGSGKTLAFLIP+V+ LL  ++   ++   AII++PTRELA QI  VL  L   H  +  
Sbjct:  60 TGSGKTLAFLIPLVQKLLRLSEPTKKHHVAAIIVSPTRELAAQIHTVLMKLLQFHEASAE 119

Query: 315 I-----------------------VMGGANRRTEAEK--LINGTNILVATPGRLLDHLQS 349
           I                       ++GG     +  +  L +  N+L+++PGRL++ + S
Sbjct: 120 ILPHLKDDDEKRPFTTVPAIVPQLLVGGTTTTVQDLRFFLRHSPNVLISSPGRLVELMSS 179

Query: 350 TRGFVFE-HLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKV 408
                 +     LV+DEADR L++GF+ ++ +IL  LPK R+T LFSA+ +  V ++ +V
Sbjct: 180 PHVHCPQSSFEVLVLDEADRLLDLGFKPDLQKILSHLPKQRRTGLFSASVSEAVGEIIRV 239

Query: 409 SFQQKPLHLGIDAE-------QPVATVEGLQQGFTIVPSEQRFRLLFTFLK----RNQRK 457
             +  P+ + +  +       +   T   LQ  + + P+ Q+   L   L+    R QR 
Sbjct: 240 GLRN-PVKIEVKVKIKGGGILEDRKTPASLQMTYMVKPASQKLPALAELLRQLPVRPQRS 298

Query: 458 KIIVFMSSCNGVKFYAELLNYI---DVPVLDLHGKQKQSKRTSTFFEFARREHAT-LLCT 513
             IVF+S+C  V ++  +L  I      ++ LHGK     R   F +F      T LL T
Sbjct: 299 --IVFLSTCAAVDYFQHILPLILPEGFALVPLHGKHAAKVREKNFNKFLSSVSPTILLTT 356

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS-EVGFLQHL 572
           D+AARGLDIP VD +VQ D P +PK +IHR GR  R    +G A++ L P  E  ++Q L
Sbjct: 357 DLAARGLDIPQVDLVVQIDAPSDPKVFIHRSGRAGRAGR-KGLAVVMLHPGREEDYVQFL 415

Query: 573 RDAKVPLNEYEFP-----KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMK 627
              K P+   E P     ++  A+   +    V  +  L   A+  F S+ ++Y +H   
Sbjct: 416 EIRKTPIAPLEKPTITTSEDDAAEFAKKTRDFVLTDRGLFDKAQKAFVSWARSYGAHQAT 475

Query: 628 DVFNVHELDIAAVAKSFGFSAPPRI 652
            +F   +LD A +  ++G    PR+
Sbjct: 476 SIFRAADLDWADLGNAWGLLRMPRM 500

ref|NP_910896.1| putative ATP-dependent helicase pitchoune [Oryza sativa (japonica cultivar-group)]
(454 aa)

Score: 213 bits (543), Expect: 1.14706e-53
Length: 326, Idn/Pos/Gap = 125/183/14 (38%/56%/4%)

Query: 234 TEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRE 293
           T IQA  IP AL GRD++   +TGSGKT AF +PI++ L + +  P     A ++APTRE
Sbjct:  38 TRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRP--CFFACVLAPTRE  95

Query: 294 LAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLING---------TNILVATPGRLL 344
           LA+QI      L S      ++V   ++R    E L  G          N  V TPGRLL
Sbjct:  96 LAIQIAKQFEALGSAISLQCSVVWWRSSRACLPEHLRKGFDSWQLWKERNSRVGTPGRLL 155

Query: 345 DHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVED 404
           DHL +T+GF F  L++LV+DEAD  L++ F++ + +IL ++PK R+T LFSAT T KV+ 
Sbjct: 156 DHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKK 215

Query: 405 LAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMS 464
           L +   +     + ++     + V+ L+Q   +VP++ +   L   L +     I+VF+ 
Sbjct: 216 LRRACLKNP---VKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVR 272

Query: 465 SCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPA 524
           +C   +  A +L  +    + + G+  Q KR      F  R+   L+CTDVA+RGLDI  
Sbjct: 273 TCESTRLLALMLRNLRFKAISISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQG 332

Query: 525 VDWIVQYDPPDEPKEYIHRVGRTARG 550
           VD ++ YD P   K+YIHRVGRTAR 
Sbjct: 333 VDVVINYDFPLNSKDYIHRVGRTARA 358

gb|EAL52039.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
(474 aa)

Score: 213 bits (543), Expect: 1.34411e-53
Length: 462, Idn/Pos/Gap = 138/234/47 (29%/50%/10%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           L + TL  I+E GF++ TE+Q   IP  L  +D+L S                       
Sbjct:  12 LRKETLDTIKEFGFSKPTEVQKVVIPAFLDRKDVLES-----------------------  48

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
            + +     III+PTRELA QI+ +      H + T  ++ GG +  T  E++  G NI+
Sbjct:  49 -IEKKEVYGIIISPTRELAHQIYDIAKIFCKHFNMTIGLLTGGIDISTLEEEMKKGANIV 107

Query: 337 VATPGRLLDHLQSTRGFVFE--HLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLF 394
           V T GR+ + +   + F  E  ++  L++DE DR +E+GF + M  I+  LPK R+T LF
Sbjct: 108 VGTAGRI-EEVIVNKLFELEWNNVEVLILDEGDRMIEMGFSQSMTRIICHLPKQRRTGLF 166

Query: 395 SATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRN 454
           SAT   ++     ++  + P  + I  +  +  +  L   + IVP E + + L   LK +
Sbjct: 167 SATMPKELNKFV-IAGCRNPYKIQISNDNTLTPIS-LANEYCIVPYEIKMQTLIRVLKES 224

Query: 455 QRKKIIVFMSSCNGVKFYAELLNYI-------DVPVLDLHGKQKQSKRTSTFFEFARREH 507
           + KKI+VF+ +C+ V +   ++  +       +  +  +HGK KQ  R     +F     
Sbjct: 225 KDKKIVVFVLTCDQVDYIYNIIKILHQEGYLKEKEIYSIHGKVKQVNRDKVIKKFEESCE 284

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVG 567
           A L+CTDV ARG+D   +++I+QYDPP +PK YIHRVGRTAR +   G +++FL P E  
Sbjct: 285 AILICTDVLARGMDFDNINYIIQYDPPQDPKTYIHRVGRTAR-MGSIGHSLIFLGPLEKS 343

Query: 568 FLQHLRDAKVPLNEYEFPKEKLADIQ--TQLEKLVEGNYYLQKSARDGFRSYLQAYASHS 625
           F+  +    V + E    + +  + +   ++ ++   N  + K +++ F S+ + Y  H 
Sbjct: 344 FILLMEKKNVKIIERTIERNEEEEKEYFNKIREICCKNRTVFKKSQNAFVSFCKGYGEHQ 403

Query: 626 MKDVFNVHELDIAAVAKSFGFSAPPRICLDVLERAKKIRRRG 667
            K +F + +L    VAK         +CL  + + ++++R G
Sbjct: 404 CKYIFAIKKLVYNEVAKG--------MCLVKMPKIQEVKRMG 437

ref|XP_541930.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Canis familiaris]
(488 aa)

Score: 213 bits (543), Expect: 1.37818e-53
Length: 394, Idn/Pos/Gap = 141/215/18 (35%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +    ++G  + T +Q   IP  L GRD L  A+TGSGKT AF++PI++ 
Sbjct:   4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +   +A +L  
Sbjct:  64 LSEDPY----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSR 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             ++++ATPGRL DHL+S+  F  + +RFLV+DEADR LE G   F  ++  IL  +P  
Sbjct: 120 KPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPTR 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  +++L  ++  Q P     +A+ PV TVE L Q + +VP + +     
Sbjct: 180 RQTLLFSATLTDTLKELQGLATNQ-PFFW--EAQAPVRTVEQLDQRYLLVPEKVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+  F   ++   II+F ++C   +    +L   + P + LH   KQ +R +   +F  
Sbjct: 237 HLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
             +  L+ TDVA+RGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G+AI  +  
Sbjct: 297 SIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRQGQAITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +  K  L E    + K+  I TQ+
Sbjct: 355 YDIHLVHAIEEQIKKQLEELSVEEAKVLQILTQV 388

emb|CAA80151.1| Hypothetical protein ZK512.2 [Caenorhabditis elegans]
sp|P34640|YOQ2_CAEEL Putative ATP-dependent RNA helicase ZK512.2 in chromosome III
ref|NP_499025.1| rna helicase (65.8 kD) (3K232) [Caenorhabditis elegans]
(578 aa)

Score: 213 bits (541), Expect: 2.25477e-53
Length: 444, Idn/Pos/Gap = 135/236/15 (30%/53%/3%)

Query: 220 PTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMP 279
           P L  + +  +   T++Q  +    L+  D++  + TGSGKTLAF++P++ ++  AK  P
Sbjct:  19 PELLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQP  78

Query: 280 RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN-GTNILVA 338
            +  GA+I++P+REL  QI  V+   A   + T   V GG       +   N   NILVA
Sbjct:  79 AD-IGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVA 137

Query: 339 TPGRLLDHLQSTRGFVFEHLR---FLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           TPGRL   +Q  +  +   +R    LVIDEADR  EI FE+ M EIL  +PK R+T LFS
Sbjct: 138 TPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFS 197

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           ATQ  + +DL     +     + +  E+  A    L+  +    ++++  +   F+++  
Sbjct: 198 ATQVKEEDDLMVFGLRNAK-QVKVAQERNSAAPSTLKNYYVECRADEKTSVCLEFIRQRT 256

Query: 456 RKKIIVFMSSCNGVKFYAELLNYI--DVPVLDLHGKQKQSKRTSTFFEFARREHATLLCT 513
            KKI++F  SCN V+++ ++        P+  +HGK     R S    F+   +  ++ T
Sbjct: 257 DKKILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPHRASQIKAFSDSTNGVMIST 316

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL 572
           DV ARG+DI  +DW++Q+D P     ++HR GRTAR   GR G A++ +   ++ ++  L
Sbjct: 317 DVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARC--GREGNALILIASEQLAYVNFL 374

Query: 573 RD-AKVPLNEYEFP---KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
            +  KV L+E + P     K  +++ ++ K+   +  + ++    F S++++YA H    
Sbjct: 375 DNHEKVKLDEIKVPTNNSRKSEELRQKMIKIQVSDRAILEAGTRAFVSHVESYAKHDCHL 434

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
           + ++ +L++  +A S+     P++
Sbjct: 435 ICSLDDLNVVGLANSYALLRLPKM 458

ref|XP_214290.2| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Rattus norvegicus]
(480 aa)

Score: 213 bits (541), Expect: 2.49221e-53
Length: 394, Idn/Pos/Gap = 142/215/18 (36%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +    ++G  + T +Q   IP  L GRD L  A+TGSGKT AF++PI++ 
Sbjct:   4 FAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +  T+A +L  
Sbjct:  64 LSEDPY----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSR 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             ++++ATPGRL DHL+S+  F  + +RFLV+DEADR LE G   F  ++  IL  +P  
Sbjct: 120 KPHVVIATPGRLADHLRSSNTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVPAR 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  +++L  ++  Q P     +A+  V TVE L Q + +VP + +     
Sbjct: 180 RQTLLFSATLTDTLKELQGLATNQ-PFFW--EAQATVRTVEQLDQRYLLVPEKVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF  + +   II+F ++C   +    +L   + P + LH   KQ +R +    F  
Sbjct: 237 HLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALARFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
             +  L+ TDVA+RGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G+AI  +  
Sbjct: 297 STYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRQGQAITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  L  + +  K  L E    + ++  I TQ+
Sbjct: 355 YDIHLLHAIEEEIKQQLAELAVEEAQVLQILTQV 388

ref|YP_206109.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
gb|AAW87221.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
(500 aa)

Score: 212 bits (540), Expect: 2.82449e-53
Length: 354, Idn/Pos/Gap = 126/200/5 (35%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS P L+ +EE G++  + IQ +AIP  + G+D++A+A+TG+GKT  F +P++E 
Sbjct:   3 FTSLGLSAPILKAVEEQGYSTPSPIQLQAIPAVIEGKDVMAAAQTGTGKTAGFTLPLLER  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L        N   A+++ PTRELA Q+   +   + +   T  +V GG     + ++L  
Sbjct:  63 LSNGPKRKFNQVRALVLTPTRELAAQVHESVEKYSKNLPLTSDVVFGGVKVNPQMQRLRR 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++LVATPGRLLD L +     F+ L  LV+DEADR L++GF  ++ +IL  LPK RQ 
Sbjct: 123 GVDVLVATPGRLLD-LANQNAIKFDQLEILVLDEADRMLDMGFIHDIKKILAKLPKNRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + ++  LAK    + P+ + +       T E ++Q   ++   ++ ++L   +
Sbjct: 182 LLFSATFSDEIRQLAK-GLVKDPVEISVAKRN--TTAETVEQSVYVMDKGRKPKVLTKLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K N  K+++VF  + +G    A+ L    V    +HG + Q  RT     F   +   L+
Sbjct: 239 KDNDWKQVLVFSKTKHGANRLAKTLEEKGVSAAAIHGNKSQGARTKALANFKSGQVRVLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
            TD+AARGLDI  +  ++  D P  P++Y+HR+GRT R     G+AI F+   E
Sbjct: 299 ATDIAARGLDIEQLPQVINVDLPKVPEDYVHRIGRTGRA-GATGKAISFVSEDE 351

ref|ZP_00289568.1| COG0513: Superfamily II DNA and RNA helicases [Magnetococcus sp. MC-1]
(439 aa)

Score: 212 bits (540), Expect: 3.20107e-53
Length: 386, Idn/Pos/Gap = 139/213/12 (36%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL L +P L  + + G+   T IQA+AIP  L+GRD+L  A+TG+GKT AF +PI+  
Sbjct:   4 FASLNLVKPLLNALTQAGYTTPTPIQAQAIPHLLAGRDLLGIAQTGTGKTAAFALPILNK  63

Query: 272 LYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L + K  P  N   A+I+ PTRELA QI   +     H   T  +V GG  ++ +   L 
Sbjct:  64 LSQIKGRPAPNAPRALILTPTRELASQIGNSIAVYGKHVPTTHTVVFGGVGKQPQIRALS 123

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +ILVATPGRLLD L   R    + ++  V+DEADR L++GF  ++  I++++P  R 
Sbjct: 124 RGVDILVATPGRLLD-LMGERHVRLDQIQVFVLDEADRMLDMGFIHDIRRIIKVIPAKRH 182

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    + +LA+      P  + +  E    TVE + Q    V  + +  LL   
Sbjct: 183 TLLFSATMPKDIAELAE-GLLTNPAKVEVTPES--TTVERITQKVLFVDKQNKRSLLKNV 239

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L+    ++++VF  + +G    AE L+   +    +HG + QS R      F + +   L
Sbjct: 240 LEHESIEQVLVFTRTKHGANRVAEYLDKHRIASAAIHGNKSQSAREKALDGFRKGKLKVL 299

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFL 569
           + TD+AARG+D+  +  ++ +D P+E + Y+HR+GRTAR   GR G AI F    E G+L
Sbjct: 300 VATDIAARGIDVAGISHVINFDLPNESESYVHRIGRTARA--GRDGNAISFCDAEERGYL 357

Query: 570 QHLRDA---KVPLN-EYEFPKEKLAD 591
             +       VP++ ++EF  E +A+
Sbjct: 358 LDIEKTIRQTVPVDIDHEFHCEVVAN 383

ref|ZP_00006980.2| COG0513: Superfamily II DNA and RNA helicases [Rhodobacter sphaeroides 2.4.1]
(453 aa)

Score: 212 bits (539), Expect: 3.33744e-53
Length: 356, Idn/Pos/Gap = 133/203/6 (37%/57%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F +L LSE  ++G+ +  F + T IQ  AIP  + GRD++  A+TG+GKTLAF +P++  
Sbjct:   4 FSTLGLSERLMQGLAKAQFTQPTPIQVEAIPYVMQGRDLMGLAQTGTGKTLAFGLPLLHR  63

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           LL      P     A+I+APTREL  QI   L             + GGA+   + E+L 
Sbjct:  64 LLGVGHPPPPRTIRALILAPTRELVTQIATNLELFTKGTPVKVVTITGGASINRQTERLA 123

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +I+VATPGRL+D L      V +H  +LV+DEAD+ L++GF   + +I R LP  RQ
Sbjct: 124 RGADIMVATPGRLIDLLDRN-AVVLDHTGYLVLDEADQMLDMGFIHSLRKIARFLPLKRQ 182

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    +E+LA  ++ ++P+   +    P   VE + QG    P   + +LL ++
Sbjct: 183 TLLFSATMPKLIEELAH-TYLREPVK--VQVAPPGKPVEKIAQGVHFTPQGDKAKLLESY 239

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L+++  ++ +VF  + +G +   +LL         +HG + Q++R  T  EF       L
Sbjct: 240 LQKHPGEQALVFGRTKHGSEKLMKLLVSWGFKAGSIHGNKSQNQRDRTLTEFRDGSLDVL 299

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
           + TDVAARG+DIP V  +  YD P+ P+ Y+HR+GRTAR     G A+ F+ P+E+
Sbjct: 300 VATDVAARGIDIPGVRHVYNYDMPNVPENYVHRIGRTARA-GAEGSAVAFVAPAEM 354

gb|AAH49396.1| Ddx49-A-prov protein [Xenopus laevis]
(482 aa)

Score: 212 bits (539), Expect: 3.3654e-53
Length: 394, Idn/Pos/Gap = 137/214/18 (34%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS   +    ++G  + + +Q   IP  L GRD +  A+TGSGKT AF++PI++ 
Sbjct:   7 FSSLGLSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQK  66

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +   +A +L  
Sbjct:  67 LSEDPF----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIIGGMDMVAQALELSR 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             +I++ATPGRL DH++S+  F  + +RFLV+DEADR LE G   F +++  IL  +P  
Sbjct: 123 KPHIVIATPGRLADHIRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTQDLQVILEAVPAQ 182

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQT+LFSAT T  +++L  V+   KP     ++   V TVE L Q + +VP + +   L 
Sbjct: 183 RQTLLFSATLTDTLQELKTVAMN-KPFFW--ESTSEVRTVEQLDQRYILVPEKVKDAYLV 239

Query: 449 TFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             +++ Q +     I++F ++C   +    +L     P + LH   KQ +R +   +F  
Sbjct: 240 YLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPSVALHSMMKQKQRFAALAKFKS 299

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
                L+ TDVAARGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G AI  +  
Sbjct: 300 SVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGMAITLVTQ 357

Query: 564 SEVGFLQHLR-DAKVPLNEYEFPKEKLADIQTQL 596
            ++  +  +     + L E++  + ++  I TQ+
Sbjct: 358 YDIHLVHAIEGQINMKLEEFKVKENEVLKILTQV 391

emb|CAE62660.1| Hypothetical protein CBG06798 [Caenorhabditis briggsae]
(577 aa)

Score: 212 bits (539), Expect: 3.62785e-53
Length: 444, Idn/Pos/Gap = 134/234/15 (30%/52%/3%)

Query: 220 PTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMP 279
           P +  + +  +   T++Q  A    L+  D++  + TGSGKTLAF++P++ ++  A+  P
Sbjct:  19 PEILEVFDKSYKSFTDVQVLAGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNARLQP  78

Query: 280 RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN-GTNILVA 338
            N  GA+I++P+REL  QI  V+   A         V GG       +   N   NILVA
Sbjct:  79 -NEIGALILSPSRELCSQIVNVIKPFAEKMKLNVETVTGGQKVDKNIKMFKNKDINILVA 137

Query: 339 TPGRLLDHLQSTRGFV---FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           TPGRL   +Q  +  +    + ++ LVIDEADR  EI FE+ M EIL  +PK R+T LFS
Sbjct: 138 TPGRLFQIIQHEKTMIARAMKGVQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFS 197

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           ATQ  + +DL     +     + +  E+  A    L+  F   P++++  +   F+++  
Sbjct: 198 ATQVKEEDDLMVFGLRNAK-QVKVSQERNSAAPSTLKNYFVECPADEKTSVCLEFIRQRT 256

Query: 456 RKKIIVFMSSCNGVKFYAELLN--YIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCT 513
            KK+++F  SCN V+++ ++        P+  +HGK     R +    F+   +  ++ T
Sbjct: 257 DKKVLIFFPSCNSVRYFHKIFERCLTKRPLFAVHGKCSNPHRAAQIKAFSESTNGVMIST 316

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL 572
           DV ARG+DI  +DW++QYD P     ++HR GRTAR   GR G A++ +   ++ ++  L
Sbjct: 317 DVMARGIDITDIDWVIQYDLPKHSSWFVHRAGRTARC--GRDGNALILIATEQLAYVSFL 374

Query: 573 RD-AKVPLNEYEFP---KEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
            +  KV L E + P     K  +++ ++ K+   +  + +     F S++++YA H    
Sbjct: 375 DNHEKVKLEEVKVPTSTSRKAEELRQKMIKIQVSDRAILELGTRAFVSHIESYAKHDCHL 434

Query: 629 VFNVHELDIAAVAKSFGFSAPPRI 652
           + ++ +L++  +A S+     P++
Sbjct: 435 ICSLDDLNVVGLANSYALLRLPKM 458

emb|CAH11468.1| hypothetical protein [Legionella pneumophila str. Paris]
ref|YP_122660.1| hypothetical protein lpp0320 [Legionella pneumophila str. Paris]
(414 aa)

Score: 211 bits (538), Expect: 5.10762e-53
Length: 380, Idn/Pos/Gap = 129/208/13 (33%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L EP  R + E+G+   T IQ +AIPL L+G D+L SA+TG+GKT +F++PI++ 
Sbjct:   3 FKQLALIEPLNRAVSELGYTNPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFVLPILQK  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
             +     RN    +I+ PTRELA+Q    +     +     A++ GG     + ++L +
Sbjct:  63 ASQQTQTSRNRAKVLILTPTRELAIQAHESIIQYGKYLTLRSAVIYGGVKSHNQIKQLDS 122

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           G  ILVATPGRLLD  Q  +G V F+ +  LV+DEADR L++GF  ++ +I+++LP  RQ
Sbjct: 123 GLEILVATPGRLLDLYQ--QGAVKFDEIDTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQ 180

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
            +LFSAT T +V  LA+    +    + ID       V+ ++Q    V    +  LL   
Sbjct: 181 NLLFSATFTPEVRTLARNILNKA---VEIDIAPRNTAVKTIKQTVYSVDGNHKLALLSHL 237

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L +N   + +VF  + +G     + L    +  + +HG + Q++RT    +F   +  TL
Sbjct: 238 LHKNNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRTKALADFKSGKVQTL 297

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TD+AARG+DI  +  +V +D P  P++Y+HR+GRT R     G A+  +   E+  L 
Sbjct: 298 IATDIAARGIDIEKLACVVNFDLPHVPEDYVHRIGRTGRA-GASGLAVSLVSTEEIKLLL 356

Query: 571 HLRD------AKVPLNEYEF 584
            +         ++ + ++EF
Sbjct: 357 SIEKLINQKLERIKIKDFEF 376

gb|EAL49901.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
(684 aa)

Score: 211 bits (537), Expect: 5.93533e-53
Length: 418, Idn/Pos/Gap = 145/229/18 (34%/54%/4%)

Query: 196 EQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASAR 255
           E++Q K S    +   F S+ L++ TL G+ + G+   T IQ +AIP  L G DI+A AR
Sbjct:   2 EEQQSKKSK---SSGGFQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMAR  58

Query: 256 TGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI 315
           TGSGKT A+L+PI+  L   +     G  ++II PTRELA+Q   V ++L    +   ++
Sbjct:  59 TGSGKTAAYLVPIINRL---ETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASL 115

Query: 316 VMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFE 375
           ++GG+    + + L +G +I+VATPGRL   L+         +  +  DEAD   E GF 
Sbjct: 116 IIGGSKLSDQFDNLSSGPDIIVATPGRLTFILEGA-NISLNRVEMVCFDEADLMFESGFS 174

Query: 376 EEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGF 435
           E++ +I+R+LP TRQ +LFSAT    + +  K + +Q P  + +D E+ ++    L   F
Sbjct: 175 EQVSDIMRMLPPTRQILLFSATLPRNLAEFLKNTLKQ-PEIIRLDTEERLSP--DLDNFF 231

Query: 436 TIVPSEQR--FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQS 493
             V   ++    L         +++ +VF ++ + V++  E+L   D+    + GK  Q 
Sbjct: 232 YHVKEHEKEGHLLYLLLDLIGDKEQTVVFCATRHEVEYLNEILKIFDIKTSIMFGKADQQ 291

Query: 494 KRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHG 553
           +R     +F ++E   LL TDVAARG+DIP +D ++ YD P  PK YIHR GR AR   G
Sbjct: 292 EREINLKKFRKQETHVLLVTDVAARGVDIPELDNVINYDFPATPKLYIHRCGRVARA--G 349

Query: 554 R-GRAILFLLPSEVGFLQHLRDAKVPLNEYEF---PKEKLADIQTQLEKLVEGNYYLQ 607
           R G+   F+   EVG+L  L+   +   E EF   P+  +     Q+++ ++GNY L+
Sbjct: 350 RMGKCYNFVQTDEVGYLMDLQVFALENKEIEFGVIPRSFIDPYIYQIQETLKGNYDLE 407

ref|YP_169942.1| ATP-dependent RNA helicase RhlE [Francisella tularensis subsp. tularensis Schu 4]
emb|CAG45585.1| ATP-dependent RNA helicase RhlE [Francisella tularensis subsp. tularensis SCHU S4]
gb|AAV29465.1| NT02FT0547 [synthetic construct]
(441 aa)

Score: 211 bits (537), Expect: 6.72666e-53
Length: 376, Idn/Pos/Gap = 129/202/8 (34%/53%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L+      +E+ G+ + T IQA+AIP+ L G D++ASA+TG+GKT  F +PI++
Sbjct:   2 KFSDLGLNSLICSALEKKGYTKPTPIQAQAIPIVLKGNDVMASAQTGTGKTAGFTLPIIQ  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            L        N    +I+ PTRELA QI   +   A++ H   A++ GG +   +  KL 
Sbjct:  62 RLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVIFGGVSINPQMMKLR 121

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G  IL+ATPGRLLD L S     F+ L   V+DEADR L++GF  ++ +I  +LPK  Q
Sbjct: 122 KGVEILIATPGRLLD-LYSQNAVKFDSLNTFVLDEADRMLDMGFINDLKKIHNLLPKKLQ 180

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T++FSAT ++++++LA   F   P  +  D      TV+ + Q    +    +   L + 
Sbjct: 181 TLMFSATFSSEIKNLAN-EFLNNPQFVSADVVN--TTVKKITQKIYTLDKSNKINALISL 237

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +K     +++VF  + NG    +E LN   +    +HG + Q+ RT    +F   +   L
Sbjct: 238 IKDQNLHQVLVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTARTKALADFKYNDINVL 297

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL- 569
           + TD+AARG+DI  +  ++  D  +  ++Y+HR+GRT R     G AI  +   EV  L 
Sbjct: 298 VATDIAARGIDIAQLPCVINLDLSNVAEDYVHRIGRTGRSGQ-EGLAISLVSADEVESLS 356

Query: 570 --QHLRDAKVPLNEYE 583
             +HL    +P  E E
Sbjct: 357 NIEHLIGHLLPREELE 372

ref|NP_355291.1| hypothetical protein AGR_C_4238 [Agrobacterium tumefaciens str. C58]
ref|NP_533006.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens str. C58]
gb|AAL43322.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens str. C58]
gb|AAK88076.1| AGR_C_4238p [Agrobacterium tumefaciens str. C58]
pir||AD2863 dead-box ATP-dependent RNA helicase rhlE [imported] - Agrobacterium tumefaciens (strain C58, Dupont)
pir||C97640 probable ATP-dependent RNA helicase (AE005260) [imported] - Agrobacterium tumefaciens (strain C58, Cereon)
(502 aa)

Score: 211 bits (537), Expect: 6.95495e-53
Length: 380, Idn/Pos/Gap = 145/209/12 (38%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+ L LSE  +  + ++G+   T IQA+AIPL L GRD++  A+TG+GKT AF +PI+E+
Sbjct:  16 FNELGLSEKIVASVTQLGYTTPTPIQAKAIPLLLEGRDLIGLAQTGTGKTAAFGLPIIEM  75

Query: 272 LYKAKWMPRNGTG-AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L K    P N T   +I+APTREL  QI   L             V+GGA+   +  +L 
Sbjct:  76 LMKQADRPANRTTRTLILAPTRELVNQIGDNLRSFVKKTPLRINQVVGGASINKQQLQLE 135

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            GT+ILVATPGRLLD L +        + +LV+DEAD+ L++GF  ++ +I R++P  RQ
Sbjct: 136 KGTDILVATPGRLLD-LIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISRMVPPKRQ 194

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ-RFRLLFT 449
           T+LFSAT    + +LA  +F   P+   ++   P    + ++Q    V  +  +  LL  
Sbjct: 195 TLLFSATMPKAISELAS-NFLTDPIK--VEVTPPGKAADKVEQYVHFVAGKNDKTDLLKK 251

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            L  N   + IVF+ + +G +   + L +I   V  +HG + Q +R      F   E   
Sbjct: 252 SLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQRERALKGFKDGEIKV 311

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGF 568
           L+ TDVAARG+DIPAV  +  YD P+ P  Y+HR+GRTAR   GR G AI F  P E   
Sbjct: 312 LVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRIGRTARA--GRDGIAIAFCAPDETRL 369

Query: 569 L---QHLRDAKVPLNEYEFP 585
           L   + L    +P+   E P
Sbjct: 370 LHDIEKLMKIDIPVASGERP 389

emb|CAH14535.1| hypothetical protein [Legionella pneumophila str. Lens]
ref|YP_125671.1| hypothetical protein lpl0304 [Legionella pneumophila str. Lens]
(414 aa)

Score: 211 bits (537), Expect: 7.07198e-53
Length: 379, Idn/Pos/Gap = 127/206/11 (33%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L EP  R + E+G+   T IQ +AIPL L+G D+L SA+TG+GKT +F++PI++ 
Sbjct:   3 FKQLALIEPLNRAVSELGYTTPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFVLPILQK  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
             +      N    +I+ PTRELA+Q+   +     +     A++ GG     + ++L +
Sbjct:  63 AGQQTPASPNRVKVLILTPTRELAIQVHESIIQYGKYLTLRSAVIYGGVKSHNQIKQLDS 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G  ILVATPGRLLD L   R   F+ +  LV+DEADR L++GF  ++ +I+++LP  RQ 
Sbjct: 123 GLEILVATPGRLLD-LYQQRAVKFDEIDTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT T +V  LA+    +    + ID       V+ ++Q    V    +  LL   L
Sbjct: 182 LLFSATFTPEVRTLARNILNKA---VEIDIAPRNTAVKTIKQTVYSVDRNHKLALLSHLL 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
            +N   + +VF  + +G     + L    +  + +HG + Q++RT    +F   +  TL+
Sbjct: 239 HKNNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRTKALADFKSGKVQTLI 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TD+AARG+DI  +  +V +D P  P++Y+HR+GRT R     G A+  +   E+  L  
Sbjct: 299 ATDIAARGIDIEKLACVVNFDLPHVPEDYVHRIGRTGRA-GASGLAVSLVSTEEIKLLLS 357

Query: 572 LRD------AKVPLNEYEF 584
           +         ++ + ++EF
Sbjct: 358 IEKLINQKLERIKIKDFEF 376

gb|AAL76409.1| ATP-dependent RNA helicase RhlE [uncultured proteobacterium]
(446 aa)

Score: 211 bits (537), Expect: 7.13123e-53
Length: 369, Idn/Pos/Gap = 129/201/9 (34%/54%/2%)

Query: 208 TPHR----FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLA 263
           TP R    F +L LSE  L+ + + G+   + IQA+AIP  L GRD++A+A+TG+GKT  
Sbjct:   4 TPERDIMSFSTLGLSESLLKAVADEGYTAPSPIQAQAIPAVLEGRDVMAAAQTGTGKTAG  63

Query: 264 FLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
           F +P++  L K +    N   A+++ PTRELA Q+   +     + +   A+V GG    
Sbjct:  64 FTLPLLHGLSKGQPAKANQVRALVLTPTRELAAQVAESVDIYGKYLNLRSAVVFGGVKIN 123

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
            +  +L  G +IL+ATPGRLLD  Q      F+ L  L++DEADR L++GF  ++  I++
Sbjct: 124 PQMMRLRKGVDILIATPGRLLDLYQQN-AMSFQKLEVLILDEADRMLDMGFIHDIRRIMK 182

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
            LPK RQ ++FSAT +  + DLAK +    P+ + +      +T   + Q    V   Q+
Sbjct: 183 ALPKKRQNLMFSATFSEDIRDLAK-TIVNNPVEISVTPRN--STAVSVTQWIHPVDKNQK 239

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
             LL   + ++  ++++VF  +  G    AE L   D+    +HG + Q  RT    EF 
Sbjct: 240 RHLLVELINQHNWEQVLVFSRTKRGANRLAEFLEKKDIQAAAIHGNKSQGARTRALSEFK 299

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLP 563
             +   L+ TD+AARGLDI  +  +V  D P+  ++Y+HR+GRT R     G+AI  +  
Sbjct: 300 SGKLRVLVATDIAARGLDIEQLPQVVNLDLPEVAQDYVHRIGRTGRA-GATGQAISLVSA 358

Query: 564 SEVGFLQHL 572
            E   LQ +
Sbjct: 359 DEAQLLQDI 367

ref|NP_349611.1| ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis ortholog [Clostridium acetobutylicum ATCC 824]
gb|AAK80951.1| ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis ortholog [Clostridium acetobutylicum ATCC 824]
pir||D97270 ATP-dependent RNA helicase (superfamily II), YDBR B. subtilis ortholog [imported] - Clostridium acetobutylicum
(528 aa)

Score: 211 bits (536), Expect: 8.28687e-53
Length: 436, Idn/Pos/Gap = 135/230/14 (30%/52%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L+   L+ I++MGF   ++IQA AIP+ + G D++  A+TG+GKT+AF  PI+ 
Sbjct:   5 KFSDLKLNSSVLKAIDDMGFEEPSKIQAEAIPVVIDGYDMIGQAQTGTGKTVAFGAPIIS  64

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            +       + G  AII+ PTRELA+QI   L  L+ +       + GG +   +   + 
Sbjct:  65 KIKDID--EKEGVQAIILTPTRELAIQITDELTRLSKYARVRVLPIYGGQSIERQMRAIK 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +++VATPGR++DH++  +    + ++FLV+DEAD  L++GF +++  I++ +   RQ
Sbjct: 123 RGVDVIVATPGRIMDHIKR-KTVKLDKVKFLVLDEADEMLDMGFIDDIEGIIKNISGDRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           TMLFSAT    ++ LA    +++  H+ I       TVE +QQ +  V ++ +F  L   
Sbjct: 182 TMLFSATMPAPIKKLASNYMKKEVKHIAIIKNS--LTVERIQQFYFEVKNKDKFEALCRI 239

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +   + +  I+F  +  GV    E + +    V  +HG   Q++R +T  +F       L
Sbjct: 240 IDVEEPETTIIFCRTKRGVDELVESMQFRGYNVEGMHGDMSQNQRINTLKKFKENNIDFL 299

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARG+D+  V  ++ YD P + + Y+HR+GRT R  +  G A   + P E   ++
Sbjct: 300 VATDVAARGIDVHNVSHVINYDIPQDMESYVHRIGRTGRA-NAEGIAYSLVTPREYVMIK 358

Query: 571 HLRD-AKVPLNEYEFPKEKLADI-QTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKD 628
            +    K  +   E P   + DI +T+   L +     +   +D F+ Y+       + D
Sbjct: 359 QIEKFTKSKIRRKEIP--TIDDIFETKYNTLTDK--ITKNIEKDDFKKYIPFV--QKLDD 412

Query: 629 VFNVHELDIAAVAKSF 644
            FN+ ++  A V   F
Sbjct: 413 EFNLVDVSAALVKMIF 428

ref|XP_418234.1| PREDICTED: similar to Hypothetical protein MGC76291 [Gallus gallus]
(479 aa)

Score: 210 bits (535), Expect: 9.87386e-53
Length: 394, Idn/Pos/Gap = 139/213/18 (35%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L+   +    +MG +R T +QA  IP  L GRD L  A+TGSGKT AF++P++++
Sbjct:   4 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQV  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         +V+GG +   +A +L  
Sbjct:  64 LSEDPY----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSR 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             ++++ATPGRL DHL+S+  F  + L+FLV+DEADR LE G   F  ++  IL  +P  
Sbjct: 120 KPHVVIATPGRLADHLRSSNTFSLKKLKFLVLDEADRLLEQGCADFTADLEVILEAVPAR 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  + +L  ++   +P     +A   V TV+ L Q + +VP   +     
Sbjct: 180 RQTLLFSATLTDTLNELKSLAMN-RPFFW--EAASEVRTVDELDQRYLLVPEAVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF   ++   II+F  +C   +    +L     P + LH   KQ +R +   +F  
Sbjct: 237 HLIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
                L+ TDVAARGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G +I  +  
Sbjct: 297 SIFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGISITMVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +  K+ L E+   ++ + DI T +
Sbjct: 355 YDIHLVHAIEEEIKLKLQEFSVEEKLVLDILTHV 388

ref|NP_719320.1| ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
gb|AAN56764.1| ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
(535 aa)

Score: 210 bits (534), Expect: 1.3445e-52
Length: 361, Idn/Pos/Gap = 127/204/5 (35%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +L LS P  + + E G+   + IQA+AIP  L+G+D++A+A+TG+GKT  F +P++EL
Sbjct:   3 FSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L K        T A+++ PTRELA Q+   +     +     A+V GG     +  KL +
Sbjct:  63 LAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLRH 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++LVATPGRLLD +Q      F  L  LV+DEADR L++GF  ++ +IL +LP  RQ 
Sbjct: 123 GVDVLVATPGRLLDLVQQN-AVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           ++FSAT + ++ +LAK      P+ + +      AT   ++Q    V   Q+  LL   +
Sbjct: 182 LMFSATFSDEIRELAK-GLVNHPVEISVTPRNAAATT--VKQWICPVDKTQKSALLIQLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K+   ++++VF  + +G    A+ L   ++    +HG + Q  RT    +F   E   L+
Sbjct: 239 KQENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TD+AARGLDI  +  +V +D P+ P++Y+HR+GRT R     G+A+  +   E+  L+ 
Sbjct: 299 ATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRA-GATGQAVSLVSSEEIKLLKD 357

Query: 572 L 572
           +
Sbjct: 358 I 358

ref|YP_094304.1| ATP-dependent RNA helicase, DEAD box family [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
gb|AAU26357.1| ATP-dependent RNA helicase, DEAD box family [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
(414 aa)

Score: 210 bits (534), Expect: 1.41353e-52
Length: 379, Idn/Pos/Gap = 126/205/11 (33%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L EP  R + E+G+   T IQ +AIPL L+G D+L SA+TG+GKT +F++PI++ 
Sbjct:   3 FKQLALIEPLNRAVSELGYTTPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFVLPILQK  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
             +      N    +I+ PTRELA+Q+   +     +     A++ GG     + ++L +
Sbjct:  63 ASQQTQTSPNRVKVLILTPTRELAIQVHESIIQYGKYLTLRSAVIYGGVKSHNQIKQLDS 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G  ILVATPGRLLD L   R   F+ +  LV+DEADR L++GF  ++ +I+++LP  RQ 
Sbjct: 123 GLEILVATPGRLLD-LYQQRAVKFDEIDTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT T +V  LA+    +    + ID       V+ ++Q    V    +  LL   L
Sbjct: 182 LLFSATFTPEVRALARNILNKA---VEIDIAPRNTAVKTIKQTVYSVDRNHKLALLSHLL 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
            +N   + +VF  + +G     + L    +  + +HG + Q++R     +F   +  TL+
Sbjct: 239 HKNNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRIKALADFKSGKVQTLI 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TD+AARG+DI  +  +V +D P  P++Y+HR+GRT R     G A+  +   E+  L  
Sbjct: 299 ATDIAARGIDIEKLACVVNFDLPHVPEDYVHRIGRTGRA-GASGLAVSLVSTEEIKLLLS 357

Query: 572 LRD------AKVPLNEYEF 584
           +         ++ + ++EF
Sbjct: 358 IEKLINQKLERIKIKDFEF 376

ref|ZP_00244669.1| COG0513: Superfamily II DNA and RNA helicases [Rubrivivax gelatinosus PM1]
(488 aa)

Score: 210 bits (534), Expect: 1.60198e-52
Length: 344, Idn/Pos/Gap = 126/198/8 (36%/57%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RFD+L L    LR + E G+  MT IQA+AIPL L+GRD++ +A+TG+GKT AF +P+++
Sbjct:  14 RFDTLALDPKLLRAVAESGYLLMTPIQAKAIPLVLAGRDVMGAAQTGTGKTAAFSLPLLQ  73

Query: 271 LLYK----AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
            + K    +    R+   A+++APTRELA Q+   +   + H      +V GG + + + 
Sbjct:  74 KMLKHESSSTSPARHPVRALVLAPTRELADQVANNVKTYSKHTQLRATVVFGGIDMKPQT 133

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            +L  G  +L+ATPGRLLDH+++ +      + ++V+DEADR L+IGF  ++  IL  LP
Sbjct: 134 AELKRGVEVLIATPGRLLDHIEA-KNCSLSQVEYVVLDEADRMLDIGFLPDLQRILSYLP 192

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K+RQT+LFSAT + +++ LA  S+ Q P+   ++  +P AT   ++Q F  V  + +   
Sbjct: 193 KSRQTLLFSATFSPEIKKLAN-SYLQDPIL--VETARPNATASTVEQRFYRVEDDDKRNA 249

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           +   L+     + IVF++S  G    A       +    LHG + Q +R      F   E
Sbjct: 250 VKQLLRTRAITQSIVFVNSKLGAARLARAFERDGLRTQALHGDKSQDERLKALAAFKAGE 309

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
              L+ TDVAARGLDI  +  +  +D P   ++Y+HR+GRT R 
Sbjct: 310 VDLLVATDVAARGLDIADLPAVFNFDVPFNAEDYVHRIGRTGRA 353

gb|EAL52211.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
(411 aa)

Score: 209 bits (533), Expect: 1.83078e-52
Length: 393, Idn/Pos/Gap = 138/209/30 (35%/53%/7%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L    L+ +E +G+ + T IQ  +IP+AL  +DI+                    
Sbjct:  11 FKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIG-------------------  51

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA-SHHHQTRAIVMGGANRRTEAEKLI 330
           ++K +     G   III PTRELA Q+  V+ ++  +    T  +++GG +   ++ +L 
Sbjct:  52 MHKQE---NRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQSVQLA 108

Query: 331 NGTNILVATPGRLLDHLQSTRGF--VFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
               ++V TPGR++ H+++T+G     E ++FLVIDEAD+ LE+ F  E+  ++  LPK 
Sbjct: 109 KRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDYLIEKLPKQ 168

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           R TMLFSAT +TKVE L + S    P+ +  + EQ   TV+ L+Q +  +P + R   L 
Sbjct: 169 RTTMLFSATMSTKVEKLQRASLTH-PVKIK-EEEQKYQTVDTLRQEYCFIPFKYRDGYLI 226

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           + LK  + K II+F   C+G      +L  +    + LHGK  Q KR     +F   +  
Sbjct: 227 SILKETEGKTIIIFTMKCSGCTKLVMMLRQMGYAAIPLHGKMSQQKRLIALEKFKSGKRG 286

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L+ TDVA+RGLDIP VD ++ YD P EPK+Y+HRVGRTAR     G AI  +    +  
Sbjct: 287 ILVATDVASRGLDIPNVDIVINYDCPLEPKDYVHRVGRTARAGKS-GYAITLVTQYSIEL 345

Query: 569 LQHLRDA-KVPLNEYEF-PKEKLADIQTQLEKL 599
            Q +    +  LNEY+   KE +A  Q   E +
Sbjct: 346 YQRIETMIEKKLNEYKVNEKEAIAYSQKANEAM 378

emb|CAH80123.1| DEAD/DEAH box helicase, putative [Plasmodium chabaudi]
(451 aa)

Score: 209 bits (532), Expect: 2.47222e-52
Length: 376, Idn/Pos/Gap = 129/198/24 (34%/52%/6%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           +  L +S P L+ + E+ F   T IQ   IPLAL G+ ILA++ TGSGKTLAF++P++E 
Sbjct:  46 WSDLHISRPLLKVLYELKFENPTYIQKDVIPLALEGKSILANSETGSGKTLAFVLPMLER 105

Query: 271 LLYKAKWMPR-------NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
           LLY      R       N T A+I+ PTRELAMQ + V++ L  +   T ++  GG + +
Sbjct: 106 LLYSPNIKLRKENRKSVNITKALILLPTRELAMQCYDVINSLIKYSPITCSLFCGGIDPK 165

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
            +  +     +I V TPGR+LD L ++     ++L  ++ DEAD+ LE+GF+EE  +IL 
Sbjct: 166 EQENEYKKKKDIFVCTPGRILDLLLNSSNDFIDYLEIVIFDEADKLLELGFKEECLKILD 225

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAE-------------QPVATVEG 430
           +    +Q + FSAT T  +++LA  S +  P+ +  + +             +     E 
Sbjct: 226 VCKFKKQILFFSATLTKDIKELANFSLRN-PIFIQSENKNKDDKNKQTNKNLKSFKISEN 284

Query: 431 LQQGF-TIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGK 489
           L Q F  I+  + R   L        +   I+F  +         LL  +D    +LHG 
Sbjct: 285 LHQEFLNIINEKYRKATLLHLCNEVYKNHCIIFFKTRKETHLMYILLKLLDFKCEELHGL 344

Query: 490 QKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR 549
             Q KR  +  +F  +E   LLCT++A+RG+DI  V ++V Y  P    +Y+HR+GRTAR
Sbjct: 345 MSQKKRIESILKFKNQEVDFLLCTELASRGIDIDHVKYVVNYSLPASVVKYVHRIGRTAR 404

Query: 550 GVHGRGRAILFLLPSE 565
            +  +G A  F LP E
Sbjct: 405 -IGKKGTACTFFLPKE 419

ref|NP_917704.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
(507 aa)

Score: 209 bits (532), Expect: 2.55613e-52
Length: 383, Idn/Pos/Gap = 134/214/48 (34%/55%/12%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           L+  RFD  P+S  +L+ I++ G+ +MT++Q   +P+ L G D+LA A+TG+GKT+AFL+
Sbjct:  71 LSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLL 130

Query: 267 PIVELLYKAKWMPRNGT-GAIIIAPTRELAMQIFGVLHDLASHHHQTRA-IVMGGANRRT 324
           P +ELL     +PR+ +   ++I PTRELA Q+      L  +H      +V+GG     
Sbjct: 131 PAIELLST---LPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTKLPQ 187

Query: 325 EAEKL-INGTNILVATPGRLLDHLQSTRGFV--FEHLRFLVIDEADRCLEIGFEEEMHEI 381
           E   +  N   ILVATPGRL DHL++T GF    + ++ LV+DEADR L++GF  ++ +I
Sbjct: 188 EQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKI 247

Query: 382 LRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSE 441
           +  +PK RQT+LFSAT                               E + Q + + P +
Sbjct: 248 IAFIPKERQTLLFSAT-----------------------------VPEEVSQMYMVAPLD 278

Query: 442 QRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTS 497
             F +L+  LK++  +    K+IVF ++    K  AE+L+ + + + ++H ++ QS RT 
Sbjct: 279 LHFSILYNVLKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSARTK 338

Query: 498 TFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGR- 556
              EF + +   L+ +DV+ARG+D P V  ++Q   P + ++YIHR+GRT R    +G+ 
Sbjct: 339 VSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGR----KGKD 394

Query: 557 --AILFLLPSEVGFLQHLRDAKV 577
              +L L P E  FL  ++D  V
Sbjct: 395 GLGLLLLAPWETYFLNSVQDLSV 417

ref|NP_989409.1| hypothetical protein LOC395046 [Xenopus tropicalis]
gb|AAH64887.1| Hypothetical protein MGC76291 [Xenopus tropicalis]
(479 aa)

Score: 209 bits (532), Expect: 2.55613e-52
Length: 394, Idn/Pos/Gap = 134/214/18 (34%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +    ++G  + + +Q   IP  L GRD +  A+TGSGKT AF++PI++ 
Sbjct:   4 FSRLGLSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +   +A +L  
Sbjct:  64 LSEDPF----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSR 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             ++++ATPGRL DH++S+  F  + +RFLV+DEADR LE G   F +++  IL  +P  
Sbjct: 120 KPHVVIATPGRLADHIRSSNTFSIKKIRFLVLDEADRLLEQGCTDFTQDLQVILEAVPAQ 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQT+LFSAT T  +++L  ++   KP     ++   V TVE L Q + +VP + +   L 
Sbjct: 180 RQTLLFSATLTDTLQELKTIAMN-KPFFW--ESTSEVRTVEQLDQRYILVPEKVKDAYLV 236

Query: 449 TFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             +++ Q +     I++F ++C   +    +L     P + LH   KQ +R +   +F  
Sbjct: 237 HLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFSFPSVALHSMMKQKQRFAALAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
                L+ TDVAARGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G AI  +  
Sbjct: 297 SVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGMAITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  +  + +   + L E++  + ++  I TQ+
Sbjct: 355 YDIHLVHAIEEQINMKLEEFKVKESEVLKILTQV 388

gb|AAH72323.1| Ddx49-A-prov protein [Xenopus laevis]
(429 aa)

Score: 209 bits (531), Expect: 2.82531e-52
Length: 379, Idn/Pos/Gap = 132/208/18 (34%/54%/4%)

Query: 227 EMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAI 286
           ++G  + + +Q   IP  L GRD +  A+TGSGKT AF++PI++ L +  +    G   +
Sbjct:  25 QLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPF----GIFCL  80

Query: 287 IIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDH 346
           ++ PTRELA QI      L         I++GG +   +A +L    +I++ATPGRL DH
Sbjct:  81 VLTPTRELAYQIAEQFRVLGKPLGLKDCIIIGGMDMVAQALELSRKPHIVIATPGRLADH 140

Query: 347 LQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKTRQTMLFSATQTTKVE 403
           ++S+  F  + +RFLV+DEADR LE G   F +++  IL  +P  RQT+LFSAT T  ++
Sbjct: 141 IRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTQDLQVILEAVPAQRQTLLFSATLTDTLQ 200

Query: 404 DLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK----KI 459
           +L  V+   KP     ++   V TVE L Q + +VP + +   L   +++ Q +     I
Sbjct: 201 ELKTVAMN-KPFFW--ESTSEVRTVEQLDQRYILVPEKVKDAYLVYLIQKFQDEHEDWSI 257

Query: 460 IVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARG 519
           ++F ++C   +    +L     P + LH   KQ +R +   +F       L+ TDVAARG
Sbjct: 258 MIFTNTCKTCQILNMMLREFSFPSVALHSMMKQKQRFAALAKFKSSVFKILIATDVAARG 317

Query: 520 LDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHLR-DAKV 577
           LDIP V  ++ ++ P  PK YIHRVGRTAR   GR G AI  +   ++  +  +     +
Sbjct: 318 LDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRNGMAITLVTQYDIHLVHAIEGQINM 375

Query: 578 PLNEYEFPKEKLADIQTQL 596
            L E++  + ++  I TQ+
Sbjct: 376 KLEEFKVKENEVLKILTQV 394

ref|ZP_00281371.1| COG0513: Superfamily II DNA and RNA helicases [Burkholderia fungorum LB400]
(521 aa)

Score: 209 bits (531), Expect: 2.82531e-52
Length: 366, Idn/Pos/Gap = 133/204/11 (36%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL LSEP +R + E+G+   T IQ +AIP  L+G D+LA A+TG+GKT  F +PI++ 
Sbjct:   3 FDSLGLSEPLVRAVHELGYTTPTPIQTQAIPAVLNGGDLLAGAQTGTGKTAGFTLPILQR  62

Query: 272 LYKAKWMPRNGTG-----AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           L  +  +  NG+G     A+I+ PTRELA Q+   +     +      ++ GG     + 
Sbjct:  63 LNSSPAVA-NGSGKRAVRALILTPTRELAAQVEESVRAYGKYLKLKSTVMFGGVGINPQI 121

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
             L +G +I+VATPGRLLDH+Q  +     HL  LV+DEADR L++GF  ++  +L  LP
Sbjct: 122 GALRSGVDIVVATPGRLLDHMQQ-KTIDLSHLEILVLDEADRMLDMGFIHDIKRVLAKLP 180

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
             RQ +LFSAT + +++ LA        L   I+  +   T E + Q    V  +++  L
Sbjct: 181 PKRQNLLFSATFSDEIKTLADNLLDSPAL---IEVARRNTTAETVAQKIHPVDRDKKREL 237

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   +K++   +++VF  + +G    AE L    +  L +HG + QS RT    EF    
Sbjct: 238 LTHLIKQHNWFQVLVFTRTKHGANRLAEQLTKDGISALAIHGNKSQSARTRALAEFKDGT 297

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TD+AARG+DI  +  +V YD P+ P++Y+HR+GRT R     G A+  +   E+
Sbjct: 298 LQVLVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRA-GATGEAVSLVCVDEL 356

Query: 567 GFLQHL 572
             L+ +
Sbjct: 357 QLLKDI 362

ref|NP_221031.1| PUTATIVE ATP-DEPENDENT RNA HELICASE RHLE (rhlE) [Rickettsia prowazekii str. Madrid E]
emb|CAA15107.1| PUTATIVE ATP-DEPENDENT RNA HELICASE RHLE (rhlE) [Rickettsia prowazekii]
pir||A71673 probable ATP-dependent RNA helicase rhlE (rhlE) RP669 - Rickettsia prowazekii
(407 aa)

Score: 208 bits (530), Expect: 3.65931e-52
Length: 350, Idn/Pos/Gap = 121/201/12 (34%/57%/3%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           LS+  +  +E M     TEIQ ++IP+A+SG DILAS++TGSGKTLA+L+P+++   K  
Sbjct:   6 LSKELIIALETMNITEPTEIQKQSIPVAMSGADILASSQTGSGKTLAYLLPLIDAFIK--  63

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
               N T A+I+ PTRELA QI   L+ + + +    A+++GG     +  +L     ++
Sbjct:  64 ----NKTTALILVPTRELATQIHSTLNKVTTAYKMNSAVLIGGEPMFKQFMQLKKNPKVI 119

Query: 337 VATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSA 396
           + TPGR+++HL + R    EH+  +V+DE DR L++G +E++ EI + LP+ RQ ++FSA
Sbjct: 120 IGTPGRIIEHL-NRRSLKIEHIGIIVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSA 178

Query: 397 TQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQR 456
           T    +  +++  +   P+ + + A    A    ++Q    V ++++F  L   L  N+ 
Sbjct: 179 TMPKHIIAVSQ-KYLNNPVRIMVGATNKAAA--EIKQELMHVSNKEKFSELTKQLG-NRV 234

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
             +I+F+ +       A++L Y +     +HG   QS+R      F +  H  ++ TDVA
Sbjct: 235 GSVIIFVKTKRSADQLAKMLKYENHKAEAIHGDLSQSQRERVILSFRKLNHRIMVATDVA 294

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
           ARGLDIP    ++ YD P  P++Y+HR+GRT R     G A+ F+ P +V
Sbjct: 295 ARGLDIPHTQHVINYDLPMCPEDYLHRIGRTGRA-GAIGHALSFISPDDV 343

ref|YP_067604.1| probable ATP-dependent RNA helicase RhlE [Rickettsia typhi str. Wilmington]
gb|AAU04122.1| probable ATP-dependent RNA helicase RhlE [Rickettsia typhi str. Wilmington]
(407 aa)

Score: 208 bits (530), Expect: 4.18194e-52
Length: 350, Idn/Pos/Gap = 121/200/12 (34%/57%/3%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           LSE  +  +E M     TEIQ ++IP+A+SG DILAS++TGSGKTLA+L+P+++   K  
Sbjct:   6 LSEELIIALETMNITEPTEIQKQSIPVAMSGADILASSQTGSGKTLAYLLPLIDAFIK--  63

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
               N T A+I+ PTRELA QI   L+ +   +    A+++GG     +  +L     ++
Sbjct:  64 ----NKTTALILVPTRELATQIHSTLNKVTIAYKINSAVLIGGEPMFKQFMQLKKNPKVI 119

Query: 337 VATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSA 396
           + TPGR+++HL + R    EH+  +V+DE DR L++G +E++ +I + LP+ RQ ++FSA
Sbjct: 120 IGTPGRIIEHL-NRRSLKIEHIGIIVLDEMDRMLDMGMKEQLEDINKFLPEKRQVLMFSA 178

Query: 397 TQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQR 456
           T    +  +++  +   P+ + + A    A    ++Q    V ++++F  L   L  N+ 
Sbjct: 179 TMPKHIIAVSQ-KYLNNPVRIMVGATNKAAA--EIKQELMHVSNKEKFSELTKQLG-NRV 234

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
             +I+F+ +       A++L Y +     +HG   QS+R      F +  H  ++ TDVA
Sbjct: 235 GSVIIFVKTKRSADQLAKMLKYENHKAEAIHGDLSQSQRARVILSFRKLNHRIMVATDVA 294

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
           ARGLDIP    ++ YD P  P++Y+HR+GRT R     G A+ F+ P +V
Sbjct: 295 ARGLDIPHTQHVINYDLPMCPEDYLHRIGRTGRA-GAIGHALSFISPDDV 343

ref|YP_190543.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
gb|AAW59887.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
(793 aa)

Score: 208 bits (529), Expect: 5.37139e-52
Length: 421, Idn/Pos/Gap = 149/226/22 (35%/53%/5%)

Query: 135 RTPAPVMETELQNAAARTPA--DEEVASSRATVHEMEPLARPCPEVTQKSSPALQSLSSE 192
           +  APV+ET  + AA  TPA   E   S +         A   P V +++  A   + + 
Sbjct: 223 KASAPVVETP-EPAAEETPAVQAEPTKSEKPVRRRRTKAATATPAVVEETVEAPAVVETV 281

Query: 193 HASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILA 252
             +E    +P        RF  L LSEP +R IEE+G+   T IQA+AIP  L G D+L 
Sbjct: 282 VVAEDVSDRP--------RFADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLG 333

Query: 253 SARTGSGKTLAFLIPIVELLYKAKW---MPRNGTGAIIIAPTRELAMQIFGVLHDLASHH 309
            A+TG+GKT +F +P+++ L  ++    MPR    ++I+ PTRELA+Q+         + 
Sbjct: 334 VAQTGTGKTASFTLPMLQKLAGSRARARMPR----SLILEPTRELALQVAENFKLYGKYL 389

Query: 310 HQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRC 369
             T A+++GG +   + + L  G ++L+ATPGRLLD L    G +      LVIDEADR 
Sbjct: 390 RLTHALLIGGESMAEQRDVLNRGVDVLIATPGRLLD-LFGRGGLLLTQTSTLVIDEADRM 448

Query: 370 LEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVE 429
           L++GF  ++ +I+ +LP  RQT+ FSAT   ++  LA  +F + P+ + +  +  VAT  
Sbjct: 449 LDMGFIPDIEKIVALLPAHRQTLFFSATMAPEIRRLAD-AFLRHPVEITVSRQSSVATT- 506

Query: 430 GLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGK 489
            +++   IVP +++ R L   L+R   +  IVF +    V    + L   D+    LHG 
Sbjct: 507 -IEEALVIVPEDEKRRTLKKLLRRENVQSAIVFCNRKRDVDMIQQYLTKHDIEAGHLHGD 565

Query: 490 QKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR 549
             QS R ST   F   E   L+C+DVAARG+DI  +  +  YD P   ++Y+HR+GRT R
Sbjct: 566 LAQSLRFSTLERFRSGELKFLVCSDVAARGIDIGGLSHVFNYDLPFNAEDYVHRIGRTGR 625

Query: 550 G 550
            
Sbjct: 626 A 626

ref|NP_473100.1| RNA helicase, putative [Plasmodium falciparum 3D7]
gb|AAC71961.1| RNA helicase, putative [Plasmodium falciparum 3D7]
pir||C71604 RNA helicase PFB0860c - malaria parasite (Plasmodium falciparum)
(562 aa)

Score: 208 bits (529), Expect: 5.37139e-52
Length: 356, Idn/Pos/Gap = 123/197/11 (34%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+ L + E  L  I+E+G+ + TEIQ   +P A   +DI+  + TGSGKT  F+IPI++ 
Sbjct: 158 FEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQD 217

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L     + +    A++I+PTREL +QI      L  +       + GG +  T++  L  
Sbjct: 218 LK----VNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSLNLAK 273

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             N++V+TPGR+LDHL +T+GF  ++L++LV DEAD+ L   FE  ++++L ILP  R T
Sbjct: 274 KPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPPNRIT 333

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
            LFSAT T  V  L K   +     + ++     +TV  L + +  +P + ++  L +  
Sbjct: 334 FLFSATMTKNVAKLKKACLKNP---VKVEVSNKYSTVSTLIETYIFLPLKYKYTYLSSLC 390

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
              Q + II+F ++C   +        + +  + LHGK  Q++R S+   F   ++  L+
Sbjct: 391 FHYQTRNIIIFTNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNSFKVNKYNILI 450

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
            T V ARGLD+  +  ++ +D     KEYIHRVGRTAR   GR G++I F+   +V
Sbjct: 451 STQVGARGLDLQDIKIVINFDIC-SCKEYIHRVGRTARA--GRSGKSITFVTQYDV 503

gb|AAO07880.1| Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
ref|NP_762890.1| Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
(398 aa)

Score: 208 bits (529), Expect: 5.46178e-52
Length: 347, Idn/Pos/Gap = 125/196/5 (36%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L       I+ +G+ + T IQ +AIP+ L GRD++A+A+TG+GKT +F++P++E 
Sbjct:   3 FTQLGLCASLTDAIDTLGYPKPTRIQTQAIPVILEGRDLIAAAQTGTGKTASFVLPMLEK  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L   +   +    A+I+ PTRELA+Q+   +     +       + GG + + + + LI 
Sbjct:  63 LRHGQTQKKKRIRALILVPTRELAIQVDEKIKQYGQNLALRSLAMFGGVDEKAQKQALIE 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G +ILVATPGRLLD +   R   FE +  LV+DEADR L++GF +++++IL  LP+  Q 
Sbjct: 123 GLDILVATPGRLLD-MYGQRAVYFEEIEMLVLDEADRMLDMGFIDDINKILDRLPENIQH 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + KV DLAK +    P  + I A+Q  A+   ++Q    V  +Q+  LL   +
Sbjct: 182 LLFSATLSNKVRDLAKSAIHN-PFEISIAAKQ--ASKSNIEQWIITVDKDQKSALLSHLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K NQ  + ++F+ + +G       L    +     H  + Q+ R     +F   +   L+
Sbjct: 239 KENQWDQTLIFIETKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLEDFKAGKIKYLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAI 558
            T VAARG+DI A+  +V YD P    EY+HR+GRT R  + +G AI
Sbjct: 299 STGVAARGIDIEALPRVVNYDLPFPADEYVHRIGRTGRA-NAKGEAI 344

emb|CAD15918.1| PROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN [Ralstonia solanacearum]
ref|NP_520332.1| PROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN [Ralstonia solanacearum GMI1000]
(495 aa)

Score: 207 bits (528), Expect: 6.89916e-52
Length: 412, Idn/Pos/Gap = 142/217/20 (34%/52%/4%)

Query: 195 SEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASA 254
           +E     PSS    P  FD+  L    LR + E G+ R T IQA AIP+ ++GRD++ +A
Sbjct:   3 TETTSAAPSS---DPVTFDTFGLHPDILRALAESGYTRATPIQAAAIPVVIAGRDVMGAA  59

Query: 255 RTGSGKTLAFLIPIVELLY----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHH 310
           +TG+GKT  F +PI++ L      +    R+   A+I+ PTRELA Q++  +   A H  
Sbjct:  60 QTGTGKTAGFSLPIIQNLLPDANTSASPARHPVRALILTPTRELADQVYDNVAKYAKHTA 119

Query: 311 QTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCL 370
              A+V GG +   + E+L  G  +LVATPGRLLDH+Q  R      +R LV+DEADR L
Sbjct: 120 LRSAVVFGGVDMNPQTEQLRRGVEVLVATPGRLLDHVQQ-RSVNLSQVRMLVLDEADRML 178

Query: 371 EIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEG 430
           ++GF  ++  I+ +LP  RQT+LFSAT + +++ LA  S+ + P    I+  +  AT + 
Sbjct: 179 DMGFLPDLQRIINLLPAHRQTLLFSATFSPEIKKLA-ASYLRHP--QTIEVARSNATADN 235

Query: 431 LQQGFTIVPSEQRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLNYIDVPVLDL 486
           ++Q    VP   +   L   L++   +    + IVF +S  G    A  L    +    +
Sbjct: 236 VRQVIYTVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAI 295

Query: 487 HGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGR 546
           HG + Q++R  T   F +     L+ TDVAARGLDI  +  ++ +D P   ++Y+HR+GR
Sbjct: 296 HGDKTQTERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGR 355

Query: 547 TARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEK 598
           T R     G A+    P +   L  +      L +   P+E L D     E+
Sbjct: 356 TGRA-GASGDALSLFAPGDERLLADIEK----LIKRNLPRETLTDFDPTGEQ 402

ref|ZP_00316618.1| COG0513: Superfamily II DNA and RNA helicases [Microbulbifer degradans 2-40]
(398 aa)

Score: 207 bits (528), Expect: 8.01718e-52
Length: 349, Idn/Pos/Gap = 123/199/5 (35%/57%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +L L +P L+ + ++G+   T IQ +AIP  L+GRD+LA A+TG+GKT +F++PI++ 
Sbjct:   3 FSTLGLCDPILQALNDVGYEAPTAIQEQAIPPILAGRDVLAKAQTGTGKTASFVLPILQT  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
                        A+I+ PTRELA+Q+   +    +H   T   ++GG +   +  KL+ 
Sbjct:  63 FKDKANRRAKRIKALILVPTRELAIQVEDNIRLYGAHLSLTSMAMVGGVDIEPQKAKLVE 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G +ILVATPGRL+D L   R   F+ L FLV+DEADR L++GF  ++++I+  LP+ RQ+
Sbjct: 123 GVDILVATPGRLID-LMHQRALHFDELEFLVLDEADRMLDMGFIGDINKIIERLPERRQS 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + KV  LAK +     + + I A++   +   + Q    V    +  LL   +
Sbjct: 182 LLFSATLSDKVRLLAKTAIVNA-VEISIAADK--KSTPPITQWLVTVDKHNKSALLTHLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
             N  K+ ++F+ + +G       L    +    +H  + Q+ RT    +F   +   L+
Sbjct: 239 NENGWKQALIFIRTKHGAAKLVTQLEKRGIKAESIHSGRSQAVRTQLLADFKAGKIGFLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAIL 559
            T +AARG+DI  +D +V YD PD+  +Y+HR+GRT R GV G   +++
Sbjct: 299 ATGIAARGIDIDDLDRVVNYDLPDDAHDYVHRIGRTGRAGVSGEAVSLI 347

sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27)
(760 aa)

Score: 207 bits (527), Expect: 8.86146e-52
Length: 401, Idn/Pos/Gap = 147/223/17 (36%/55%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E 
Sbjct: 186 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 245

Query: 271 LLYKAKWMPRNG--TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEK 328
           L+YK    PR    T  +++ PTREL +Q+  V   LA     T  + +GG + +++   
Sbjct: 246 LIYK----PRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAA 301

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L    +IL+ATPGRL+DHL +   F    +  L++DEAD+ L+  FEE+M EI+R+    
Sbjct: 302 LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADKMLDEYFEEQMKEIIRMCSHH 361

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFR 445
           RQTMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  
Sbjct: 362 RQTMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREA 418

Query: 446 LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARR 505
           ++   L R     +++F  +         LL  + + V +LHG   Q++R      F   
Sbjct: 419 IVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDE 478

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPS 564
           +   L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   
Sbjct: 479 QIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARA--GRAGRSVSLVGEE 536

Query: 565 EVGFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
           E   L+ + + AK P+     P++ +   + ++EKL +  Y
Sbjct: 537 ERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKLEKDVY 577

ref|NP_937513.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
dbj|BAC97483.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
(402 aa)

Score: 207 bits (527), Expect: 9.39444e-52
Length: 347, Idn/Pos/Gap = 124/197/5 (35%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L       ++ +G+ + T IQ +AIP+ L G+D++A+A+TG+GKT +F++P++E 
Sbjct:   7 FTQLGLCASLTDALDTLGYPKPTRIQTQAIPVILEGQDLIAAAQTGTGKTASFVLPMLEK  66

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L   +   +    A+I+ PTRELA+Q+   +     +       + GG + +T+ + LI 
Sbjct:  67 LRHGQTQKKKRIRALILVPTRELAIQVDEKIKQYGQNLALRSLAMFGGVDEKTQKQALIE 126

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G +ILVATPGRLLD +   R   FE +  LV+DEADR L++GF +++++IL  LP+  Q 
Sbjct: 127 GLDILVATPGRLLD-MYGQRAVYFEEIEMLVLDEADRMLDMGFIDDINKILDRLPENIQH 185

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + KV DLAK +    P  + I A+Q  A+   ++Q    V  +Q+  LL   +
Sbjct: 186 LLFSATLSNKVRDLAKSAIHN-PFEISIAAKQ--ASKSNIEQWIITVDKDQKSALLSHLI 242

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K NQ  + ++F+ + +G       L    +     H  + Q+ R     +F   +   L+
Sbjct: 243 KENQWDQTLIFIETKHGAAKLVSQLEKRGIVAEAFHSGRSQAVREQLLEDFKAGKIKYLV 302

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAI 558
            T VAARG+DI A+  +V YD P    EY+HR+GRT R  + +G AI
Sbjct: 303 STGVAARGIDIEALPRVVNYDLPFPADEYVHRIGRTGRA-NAKGEAI 348

gb|AAR05178.1| putative ATP-dependent RNA helicase [uncultured marine proteobacterium ANT8C10]
(635 aa)

Score: 207 bits (527), Expect: 9.63256e-52
Length: 364, Idn/Pos/Gap = 131/208/15 (35%/57%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LSEP L+ +E++   + +EIQ +AIP+ L+G++I+A+A+TG+GKT +F++P++E+
Sbjct:   3 FKELGLSEPILKSLEDLEHTKPSEIQQQAIPVILAGKNIMAAAQTGTGKTGSFVLPMLEM  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L++          A+++ PTRELA Q+   +H      + T   V GGA    +  KL  
Sbjct:  63 LHEQAKPYSKNVHALVLTPTRELAAQVRESVHSYGKLTNITSTAVFGGAKIFPQKAKLKK 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G +ILVATPGRLLD L + +    + ++ LV+DEAD  L++GF  ++ +I+ + P TRQ 
Sbjct: 123 GVDILVATPGRLLD-LVNQKAVKLDQVQILVLDEADHMLDMGFIHDIKKIIAMTPPTRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLG-----IDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           +LFSAT + +++ LA+         LG     I A+ P  TV  ++Q    V   ++  L
Sbjct: 182 LLFSATFSPEIKKLAQ--------SLGDGLVEISAQSPNTTVSKIKQIVYHVDKNKKSDL 233

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   ++  Q  + +VF  + +G +  A+ LN   +    +HG + Q  RT    EF  + 
Sbjct: 234 LAHMIEEEQWDQALVFSKTKHGCEKIADYLNAAGIETGTIHGDKTQGARTKALREFKGKF 293

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TDVAARG+DI  + ++V +D P  P +YIHR+GRT R     G AI  +   E 
Sbjct: 294 VRVLVATDVAARGIDISNLPFVVNFDMPTYPNDYIHRIGRTGRAGQ-EGTAISLMSSDEH 352

Query: 567 GFLQ 570
            FL+
Sbjct: 353 KFLR 356

ref|NP_691530.1| ATP-dependent RNA helicase [Oceanobacillus iheyensis HTE831]
dbj|BAC12565.1| ATP-dependent RNA helicase [Oceanobacillus iheyensis HTE831]
(495 aa)

Score: 207 bits (527), Expect: 9.71327e-52
Length: 359, Idn/Pos/Gap = 132/200/9 (36%/55%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F+ L +S P ++ +E+MGF   T IQA  IP AL G D++  A+TG+GKT AF IP++ 
Sbjct:   3 KFNELGVSAPIMKALEKMGFEEATPIQAETIPHALEGHDVIGQAQTGTGKTAAFGIPLIN  62

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            +  AK     G   +I+APTRELA+Q+   ++ LA         + GG     +   L 
Sbjct:  63 KI-NAKLRKVQG---LIVAPTRELAIQVAEEINRLAKFKSVRALAIYGGQPMDRQIRALK 118

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +G  I+VATPGRLLDH++  +    + +   V+DEAD  L +GF +++ EIL+ +P+ RQ
Sbjct: 119 DGPQIVVATPGRLLDHMRR-KTIRIDQVHTAVLDEADEMLNMGFIDDIREILKGIPEERQ 177

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT   ++ ++A  +  ++P  + + A++   TVE + Q F  +P + +F  L   
Sbjct: 178 TLLFSATMPKEIRNIA-TTLMKEPKEVKVKAKE--MTVENIDQYFIEIPEKYKFDTLNNH 234

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L  N  +  I+F  +   V   AE L         +HG   Q KR S   +F +     L
Sbjct: 235 LDINSPELAIIFARTKKRVDEVAEGLQARGYRSEGIHGDLTQGKRMSVLKKFKQGRVDVL 294

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           + TDVAARGLDI  V  +  +D P +P+ Y+HR+GRT R     G AI F+ P E+  L
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKMGEAISFITPREMAHL 352

ref|NP_782568.1| ATP-dependent RNA helicase [Clostridium tetani E88]
gb|AAO36505.1| ATP-dependent RNA helicase [Clostridium tetani E88]
(524 aa)

Score: 207 bits (527), Expect: 9.87672e-52
Length: 402, Idn/Pos/Gap = 129/215/15 (32%/53%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F++L L+E  L+ IE+MGF   ++IQA  IP+ L G D++  A+TG+GKTLAF  P++ 
Sbjct:   5 KFNNLGLNEDILKAIEDMGFETPSKIQAEVIPIVLQGFDVIGQAQTGTGKTLAFGAPVLN  64

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            +            +II+APTRELA+Q++  L  +A +       V GG +   + + L 
Sbjct:  65 SISNES----KKVKSIILAPTRELAIQVYKELTTVAKYTKFKLLPVYGGDSIDRQIKSLK 120

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +I++ TPGR+ D L + +     H+ FLV+DEAD  L +GF +++  IL+   + R+
Sbjct: 121 KGIDIVIGTPGRVQD-LINRKALNLSHIEFLVLDEADEMLNMGFVDDIENILKSCNEDRR 179

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT  ++++ +AK   ++   H+ I   Q   TV  ++Q +  V  + +F  L   
Sbjct: 180 TLLFSATMPSEIKKIAKKYMKKDAKHVAI--AQNSMTVSSVEQFYYEVKQKNKFESLCKV 237

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L  ++  + I+F  +  GV      +         +HG   QS R +T   F  R    L
Sbjct: 238 LSVDEPTRAIIFCKTKKGVDELVSSMKEKGFSAEGMHGDMTQSHRLNTLNRFKERTIPFL 297

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARG+D+     ++ YD P + + Y+HR+GRT R  + +G A  F+ P E   L+
Sbjct: 298 VATDVAARGIDVKDTSHVINYDLPQDTESYVHRIGRTGRA-NKKGTAYTFVTPKEFSSLK 356

Query: 571 HLRD-AKVPLNEYEFP------KEKLADIQTQLEKLVEGNYY 605
            ++  +K  +N+ + P      K K   I   +E+ +  + Y
Sbjct: 357 RIQKISKSKINKRQLPTMDDVLKAKFDSILNDVEQTLSKDNY 398

gb|AAR38313.1| ATP-dependent RNA helicase RhlE [uncultured bacterium 581]
(446 aa)

Score: 207 bits (526), Expect: 1.20665e-51
Length: 361, Idn/Pos/Gap = 125/197/5 (34%/54%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +L LSE  L+ + + G+   + IQA+AIP  L GRD++A+A+TG+GKT  F +P++  
Sbjct:   3 FSTLGLSESLLKAVADEGYTTPSPIQAQAIPAVLEGRDVMAAAQTGTGKTAGFTLPLLHG  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L K +    N   A+++ PTRELA Q+   +     + +   A+V GG     +  +L  
Sbjct:  63 LSKGQSAKANQVRALVLTPTRELAAQVAESVDIYGKYLNLRSAVVFGGVKINPQMMRLRK 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G +IL+ATPGRLLD  Q      F+ L  L++DEADR L++GF  ++  I++ LP  RQ 
Sbjct: 123 GVDILIATPGRLLDLYQQN-AMSFQKLEVLILDEADRMLDMGFIHDIRRIMKALPNKRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           ++FSAT +  + DLAK +    P+ + +      +T   + Q    V   Q+  LL   +
Sbjct: 182 LMFSATFSEDIRDLAK-TIVNNPVEISVTPRN--STAVSVTQWIHPVDKNQKRHLLVELI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
            ++  ++++VF  +  G    AE L   D+    +HG + Q  RT    EF   +   L+
Sbjct: 239 NQHNWEQVLVFSRTKRGANRLAEFLEKKDIQAAAIHGNKSQGARTRALSEFKSGKLRVLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TD+AARGLDI  +  +V  D P+  ++Y+HR+GRT R     G+AI  +   E   LQ 
Sbjct: 299 ATDIAARGLDIEQLPQVVNLDLPEVAQDYVHRIGRTGRA-GATGQAISLVSADEAQLLQD 357

Query: 572 L 572
           +
Sbjct: 358 I 358

gb|AAF39890.2| Hypothetical protein H20J04.4 [Caenorhabditis elegans]
ref|NP_494765.2| DEAD/DEAH box helicase and helicase, C-terminal (2E623) [Caenorhabditis elegans]
(488 aa)

Score: 207 bits (526), Expect: 1.34489e-51
Length: 428, Idn/Pos/Gap = 141/223/27 (32%/52%/6%)

Query: 195 SEQEQPKP---SSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDIL 251
           S  + PKP   S   +T  +F  L +     + ++ M     T +QA  IP  L G DIL
Sbjct:  71 SSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDIL 130

Query: 252 ASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ 311
             ARTG+GKTLAF IPI++ L    +    G  A+I+ PTRELA QI      L      
Sbjct: 131 GCARTGTGKTLAFAIPILQKLSVDPY----GIYALILTPTRELAFQIAEQFTALGKPITL 186

Query: 312 TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQS---TRGFVFEHLRFLVIDEADR 368
             ++++GG +   +A +L    +++VATPGRL D ++S   T   VF+ ++F V+DEADR
Sbjct: 187 KCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADR 246

Query: 369 CLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATV 428
            LE  + +++  I   + + RQT+L SAT T  +  L +VS  +KP       +   +TV
Sbjct: 247 MLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVS-TRKPYFFEDKGKDDESTV 305

Query: 429 EGLQQGFTIVPSEQRFRLLFTFLK----RNQRKKIIVFMSSCNGVKFYAELLNYIDVPVL 484
           + L+Q + + P   +   L   +K    +N +  +++F  +C   +  A +   +   V 
Sbjct: 306 DRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVG 365

Query: 485 DLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRV 544
            LH +  Q +R +    F  +    ++CTDVA+RGLDIP VD +V ++ P  PK YIHRV
Sbjct: 366 SLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRV 425

Query: 545 GRTARGVHGR-GRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGN 603
           GR+AR   GR G A+ F+   +V  LQ +          +   +KL +++ +++   +  
Sbjct: 426 GRSARA--GRFGSALSFVTQYDVELLQAVE---------QVIGKKLDELKVKIQTFRKNI 474

Query: 604 YYLQKSAR 611
           +  QKS R
Sbjct: 475 WKTQKSTR 482

gb|AAQ67058.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Porphyromonas gingivalis W83]
ref|NP_906159.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Porphyromonas gingivalis W83]
(427 aa)

Score: 206 bits (525), Expect: 1.57593e-51
Length: 358, Idn/Pos/Gap = 124/199/9 (34%/55%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RFD L L +  L G++ M F   T +QA  IP  L GRD++A A+TG+GKT A+L+PI++
Sbjct:   2 RFDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILD  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR---RTEAE 327
            L   ++   +   A+I+APTRELA QI   +   +     +   + GG +      +  
Sbjct:  62 RLSAGEF-ASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRR 120

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
            +  G +I++ATPGRL+ HL      +  H+ + V+DEADR L++GF +++ +I + LP 
Sbjct: 121 GMAMGADIVIATPGRLISHLNLGSADL-SHVSYFVLDEADRMLDMGFFDDIMQIYKQLPS 179

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
           + QT++FSAT   K+  LA  S  + P+ + I   +P    E + Q   I    Q+  +L
Sbjct: 180 SCQTVMFSATMPPKIRKLA-ASILRDPIEVEIAISRPP---ESIMQSAYICHEAQKLPIL 235

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
               +++  K+ I+F S+   V+     L  +   V D+H   +QS+R     +F     
Sbjct: 236 RKLFEQSAPKRTIIFASAKLKVRELTSTLRKMGFNVADMHSDLEQSQREQVMRDFKNGYV 295

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
             L+ TD+ ARG+DI  +  ++ YD P +P++Y+HR+GRTARG +G G AI F+   E
Sbjct: 296 DVLVATDIVARGIDIDNIRVVINYDIPHDPEDYVHRIGRTARGTNGEGLAITFVSEEE 353

ref|YP_013487.1| ATP-dependent RNA helicase DeaD [Listeria monocytogenes str. 4b F2365]
ref|ZP_00229866.1| ATP-dependent RNA helicase DeaD [Listeria monocytogenes str. 4b H7858]
gb|EAL10253.1| ATP-dependent RNA helicase DeaD [Listeria monocytogenes str. 4b H7858]
gb|AAT03664.1| ATP-dependent RNA helicase DeaD [Listeria monocytogenes str. 4b F2365]
(519 aa)

Score: 206 bits (525), Expect: 1.68471e-51
Length: 364, Idn/Pos/Gap = 129/199/9 (35%/54%/2%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           +T  +F    L E  ++ +  MGF   T IQ + IPL L+G+D++  A+TG+GKT AF +
Sbjct:   1 MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGL  60

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           P++  + +      N   A+IIAPTRELA+Q+   L+ L+   H     V GG++   + 
Sbjct:  61 PMIHKIDQKS----NNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQI 116

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
             L     I+V TPGR+LDH+ + R    +H+  LV+DEAD  L +GF +++  IL+ +P
Sbjct: 117 RSLKKNPQIVVGTPGRILDHI-NRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVP 175

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
             RQT+LFSAT    +  + +  F   P  + I A++  A +  ++Q F  V  +++F +
Sbjct: 176 AERQTLLFSATMPDPIRRIGE-RFMHSPELIRIKAKEMTALL--IEQFFVKVHEKEKFDV 232

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L     +  IVF  +   V   +  L+        +HG   Q+KR S   +F   +
Sbjct: 233 LSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGK 292

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TDVAARGLDI  V  +  YD P +P+ Y+HR+GRT R     G AI F+ P E+
Sbjct: 293 IDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRA-GKEGMAITFVQPREM 351

Query: 567 GFLQ 570
           G+L+
Sbjct: 352 GYLR 355

ref|ZP_00232487.1| ATP-dependent RNA helicase DeaD [Listeria monocytogenes str. 1/2a F6854]
gb|EAL07674.1| ATP-dependent RNA helicase DeaD [Listeria monocytogenes str. 1/2a F6854]
(522 aa)

Score: 206 bits (523), Expect: 2.39177e-51
Length: 364, Idn/Pos/Gap = 129/198/9 (35%/54%/2%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           +T  +F    L E  ++ +  MGF   T IQ + IPL L G+D++  A+TG+GKT AF +
Sbjct:   1 MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGL  60

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           P++  + +      N   A+IIAPTRELA+Q+   L+ L+   H     V GG++   + 
Sbjct:  61 PMIHKIDQKS----NNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQI 116

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
             L     I+V TPGR+LDH+ + R    +H+  LV+DEAD  L +GF +++  IL+ +P
Sbjct: 117 RSLKKNPQIVVGTPGRILDHI-NRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVP 175

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
             RQT+LFSAT    +  + +  F   P  + I A++  A +  ++Q F  V  +++F +
Sbjct: 176 AERQTLLFSATMPDPIRRIGE-RFMHSPELIRIKAKEMTALL--IEQFFVKVHEKEKFDV 232

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L     +  IVF  +   V   +  L+        +HG   Q+KR S   +F   +
Sbjct: 233 LSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGK 292

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TDVAARGLDI  V  +  YD P +P+ Y+HR+GRT R     G AI F+ P E+
Sbjct: 293 IDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRA-GKEGMAITFVQPREM 351

Query: 567 GFLQ 570
           G+L+
Sbjct: 352 GYLR 355

gb|AAK21271.1| RNA helicase-like protein [Homo sapiens]
(561 aa)

Score: 206 bits (523), Expect: 2.43202e-51
Length: 383, Idn/Pos/Gap = 139/215/13 (36%/56%/3%)

Query: 228 MGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLYKAKWMPRNGTGAI 286
           MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E L+YK +  P   T  +
Sbjct:   1 MGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPV--TRVL  58

Query: 287 IIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDH 346
           ++ PTREL +Q+  V   LA   + T  + +GG + +++   L    +IL+ATPGRL+DH
Sbjct:  59 VLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDH 118

Query: 347 LQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLA 406
           L +   F    +  L++DEADR L+  FEE+M EI+R+    RQTMLFSAT T +V+DLA
Sbjct: 119 LHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLA 178

Query: 407 KVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLLFTFLKRNQRKKIIVFM 463
            VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++   L R     +++F 
Sbjct: 179 SVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFT 235

Query: 464 SSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIP 523
            +          L  + + V +LHG   Q++R      F   +   L+ TDVAARGLDI 
Sbjct: 236 QTKKQAHRMHIFLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIE 295

Query: 524 AVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL-RDAKVPLNE 581
            V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E   L+ + + AK P+  
Sbjct: 296 GVKTVINFTMPNTIKHYVHRVGRTARA--GRAGRSVSLVGEDERKMLKEIVKAAKAPVKA 353

Query: 582 YEFPKEKLADIQTQLEKLVEGNY 604
              P++ +   + ++EK+ +  Y
Sbjct: 354 RILPQDVILKFRDKIEKMEKDVY 376

ref|XP_134242.3| similar to hypothetical protein FLJ10432 [Mus musculus]
(480 aa)

Score: 206 bits (523), Expect: 2.57829e-51
Length: 394, Idn/Pos/Gap = 138/215/18 (35%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  + LS   +    ++G  + T +Q   IP  L GRD L  A+TGSGKT AF++PI++ 
Sbjct:   4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +  +    G   +++ PTRELA QI      L         I++GG +   +A +L  
Sbjct:  64 LSEDPY----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSR 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIG---FEEEMHEILRILPKT 388
             ++++ATPGRL DHL+S+  F  + ++FLV+DEADR LE G   F  ++  IL  +P  
Sbjct: 120 KPHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPAR 179

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR----F 444
           RQT+LFSAT T  +++L  ++   +P     +A+  V TVE L Q + +VP + +     
Sbjct: 180 RQTLLFSATLTDTLKELQGLA-TNEPFFW--EAQATVRTVEQLDQRYLLVPEKVKDAYLV 236

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            L+ TF  + +   II+F ++C   +    +L   + P + LH   KQ +R +   +F  
Sbjct: 237 HLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKS 296

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLP 563
             +  L+ TDVA+RGLDIP V  ++ ++ P  PK YIHRVGRTAR   GR G+AI  +  
Sbjct: 297 SIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA--GRQGQAITLVTQ 354

Query: 564 SEVGFLQHLRDA-KVPLNEYEFPKEKLADIQTQL 596
            ++  L  + +  K  L E    + ++  I TQ+
Sbjct: 355 YDIHLLHAIEEQIKQQLAELVVEEAEVLQILTQV 388

gb|AAL20573.1| ATP-dependent RNA helicase [Salmonella typhimurium LT2]
ref|NP_460614.1| ATP-dependent RNA helicase [Salmonella typhimurium LT2]
(457 aa)

Score: 206 bits (523), Expect: 2.68813e-51
Length: 352, Idn/Pos/Gap = 132/197/15 (37%/55%/4%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           L    L  + E+G+  MT +QA A+P+ L+G D+   ARTGSGKT AF + ++  +    
Sbjct:  10 LPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTL  69

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRTEAEKLINGTNI 335
           +     T A+++ PTRELA Q+ G L  LA     T+ + + GG     + + L +  +I
Sbjct:  70 FQ----TQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHI 125

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           +VATPGRLLDHLQ       + L  LV+DEADR L++GF + + E++R  P TRQT+LFS
Sbjct: 126 IVATPGRLLDHLQK-ETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFS 184

Query: 396 ATQTTKVEDLAKVS--FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR 453
           AT     E +A +S   QQ+P+ + ID    V  +  ++Q F    + ++  LL T L +
Sbjct: 185 ATWP---EAIAAISGRVQQQPIRIEIDT---VDALPAIEQQFFETSAHEKISLLQTLLSQ 238

Query: 454 NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCT 513
           +Q    +VF ++    +   + LN +    L LHG  +Q  R  T   FA      L+ T
Sbjct: 239 HQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVAT 298

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
           DVAARGLDI +++ +V Y+   +P+ ++HR+GRTAR     G AI F  P E
Sbjct: 299 DVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARA-GSSGLAISFCAPEE 349

ref|YP_216637.1| ATP-dependent RNA helicase, stimulated by 23S rRNA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gb|AAX65556.1| ATP-dependent RNA helicase, stimulated by 23S rRNA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
(457 aa)

Score: 206 bits (523), Expect: 2.73336e-51
Length: 352, Idn/Pos/Gap = 132/197/15 (37%/55%/4%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           L    L  + E+G+  MT +QA A+P+ L+G D+   ARTGSGKT AF + ++  +    
Sbjct:  10 LPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTL  69

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRTEAEKLINGTNI 335
           +     T A+++ PTRELA Q+ G L  LA     T+ + + GG     + + L +  +I
Sbjct:  70 FQ----TQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHI 125

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           +VATPGRLLDHLQ       + L  LV+DEADR L++GF + + E++R  P TRQT+LFS
Sbjct: 126 IVATPGRLLDHLQK-ETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFS 184

Query: 396 ATQTTKVEDLAKVS--FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR 453
           AT     E +A +S   QQ+P+ + ID    V  +  ++Q F    + ++  LL T L +
Sbjct: 185 ATWP---EAIAAISGRVQQQPIRIEIDT---VDALPAIEQQFFETSAHEKISLLQTLLSQ 238

Query: 454 NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCT 513
           +Q    +VF ++    +   + LN +    L LHG  +Q  R  T   FA      L+ T
Sbjct: 239 HQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVAT 298

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
           DVAARGLDI +++ +V Y+   +P+ ++HR+GRTAR     G AI F  P E
Sbjct: 299 DVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARA-GSSGLAISFCAPEE 349

emb|CAD77366.1| putative ATP-dependent RNA helicase rhlE [Rhodopirellula baltica SH 1]
ref|NP_870291.1| putative ATP-dependent RNA helicase rhlE [Rhodopirellula baltica SH 1]
(485 aa)

Score: 206 bits (523), Expect: 2.80265e-51
Length: 374, Idn/Pos/Gap = 127/202/21 (33%/54%/5%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           ++F+ L L+ P L+G+E+ G+   T IQA++IP  L G D+L +A+TG+GKT AF +PI+
Sbjct:   2 NKFEDLGLTGPLLQGLEQAGYETPTPIQAQSIPEILDGNDVLGAAQTGTGKTAAFALPIL  61

Query: 270 ELLYKAKWMPRNGT------------GAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM 317
           +++++     R  +              ++++PTREL+ QI                ++ 
Sbjct:  62 QIMWEDDQERREPSKRRGGRPGRRPIRTLVLSPTRELSAQIEANFRIYGKKTRLRSTVIF 121

Query: 318 GGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEE 376
           GG N+  +  +L +G + LVATPGRLLD +   +GF+  + +  LV+DEAD  L++GF  
Sbjct: 122 GGVNQNPQVRELQSGVDTLVATPGRLLDLVN--QGFIDLKDVEILVLDEADHMLDMGFLP 179

Query: 377 EMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT 436
           ++  IL+ LP+ RQ +LFSAT    +  LA       P+ + I  ++P  TVE ++Q   
Sbjct: 180 DVKRILKFLPRDRQNLLFSATMPGPIRKLAD-EILVDPVTIQIAPQKP--TVERIEQSIC 236

Query: 437 IVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRT 496
            V    + RLL  F++       +VF  + +G    A  L    V    +HG + Q+ R 
Sbjct: 237 FVAQADKPRLLNHFIETKATGSTLVFTRTKHGADAVARRLVKAGVKAAAIHGNKTQANRV 296

Query: 497 STFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-G 555
            T  +F   E   L+ TDVAARG+DI  +  ++ YD P+ P+ Y+HR+GRT R   GR G
Sbjct: 297 RTLNKFKNDELDVLVATDVAARGIDIDGIQTVINYDTPNTPEAYVHRIGRTGRA--GREG 354

Query: 556 RAILFLLPSEVGFL 569
             ++F    E  F 
Sbjct: 355 ETVMFCGGHETKFF 368

ref|XP_395653.1| similar to CG9253-PA [Apis mellifera]
(409 aa)

Score: 206 bits (523), Expect: 2.84981e-51
Length: 351, Idn/Pos/Gap = 127/190/53 (36%/54%/15%)

Query: 223 RGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNG 282
           +  E++ +   T+IQ  AIPLAL G+DI+  A TGSGKT AF +PI++            
Sbjct:  31 KACEDLKWKSPTKIQYEAIPLALEGKDIIGLAETGSGKTAAFALPILQ------------  78

Query: 283 TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGR 342
             A++  P R               + + T+                    +IL+ATPGR
Sbjct:  79 --ALLENPQR---------------YFYWTKK------------------PHILIATPGR 103

Query: 343 LLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKV 402
           L+DHL++T+GF    L+FLV+DEADR L + FE E+ +ILR++P+ R+T+LFSAT T KV
Sbjct: 104 LVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERKTLLFSATMTKKV 163

Query: 403 EDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVF 462
           + L + S +     + ++      TVE LQQ +  +P + +   L   L        ++F
Sbjct: 164 QKLQRASLRNP---VKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIF 220

Query: 463 MSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDI 522
            ++CN     A LL  +    + LHG+  Q+KR +   +F  +  + L+ TDVA+RGLDI
Sbjct: 221 CATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFKAKNRSILISTDVASRGLDI 280

Query: 523 PAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL 572
           P VD ++ +D P   K+YIHRVGRTAR   GR GR+I F+   +V   Q +
Sbjct: 281 PHVDIVINFDIPTHSKDYIHRVGRTARA--GRSGRSITFVTQYDVELYQRI 329

ref|NP_746872.1| ATP-dependent RNA helicase, DEAD box family [Pseudomonas putida KT2440]
gb|AAN70336.1| ATP-dependent RNA helicase, DEAD box family [Pseudomonas putida KT2440]
(443 aa)

Score: 206 bits (523), Expect: 2.94653e-51
Length: 359, Idn/Pos/Gap = 130/201/6 (36%/55%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  L L EP LR ++++ +   T +QA+AIP  L+GRD++A+A+TG+GKT  F +P+++ 
Sbjct:   3 FAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQR  62

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L  + + +  N   A+++ PTRELA Q+   + + A +   T   V GG +   +  +L 
Sbjct:  63 LALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQMMRLR 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++LVATPGRLLD L       F  ++ LV+DEADR L++GF EE+  +   LP+ RQ
Sbjct: 123 RGVDLLVATPGRLLD-LFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT + ++  LA ++       L I+     AT   ++Q    V  +++  L    
Sbjct: 182 TLLFSATFSDQIRMLAGLALNDP---LSIEVSPRNATAASVKQWLVPVDKKRKADLFCHL 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L++ + K+++VF  + NGV    E L    V    +HG + Q+ R      F  RE   L
Sbjct: 239 LRKQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVL 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           + TDVAARGLDI  +  +V  D P   ++Y+HR+GRT R    +G AI  +   EV  L
Sbjct: 299 VATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRA-GNKGEAISLVCADEVQLL 356

ref|NP_470201.1| hypothetical protein lin0859 [Listeria innocua Clip11262]
emb|CAC96091.1| lin0859 [Listeria innocua]
pir||AC1540 ATP-dependent RNA helicase homolog lin0859 [imported] - Listeria innocua (strain Clip11262)
(516 aa)

Score: 206 bits (523), Expect: 2.97121e-51
Length: 360, Idn/Pos/Gap = 128/197/9 (35%/54%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F    L E  ++ +  MGF   T IQ + IPL L+G+D++  A+TG+GKT AF +P++ 
Sbjct:   3 KFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGLPMIH  62

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            + +      N   A+IIAPTRELA+Q+   L+ L+   H     V GG++   +   L 
Sbjct:  63 KIDQKS----NNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK 118

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
               I+V TPGR+LDH+ + R    +H+  LV+DEAD  L +GF +++  IL+ +P  RQ
Sbjct: 119 KNPQIVVGTPGRILDHI-NRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQ 177

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    +  + +  F   P  + I A++  A +  ++Q F  V  +++F +L   
Sbjct: 178 TLLFSATMPDPIRRIGE-RFMHSPELIRIKAKEMTALL--IEQFFVKVHEKEKFDVLSRL 234

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     +  IVF  +   V   +  L+        +HG   Q+KR S   +F   +   L
Sbjct: 235 LDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVL 294

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLDI  V  +  YD P +P+ Y+HR+GRT R     G AI F+ P E+G+L+
Sbjct: 295 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRA-GKEGMAITFVQPREMGYLR 353

emb|CAG62136.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_449166.1| unnamed protein product [Candida glabrata]
(617 aa)

Score: 206 bits (523), Expect: 3.02121e-51
Length: 463, Idn/Pos/Gap = 146/242/42 (31%/52%/9%)

Query: 223 RGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKA----KWM 278
           + I   GF  MT +QA  IP+    +D++  + TGSGKT+AF+IPI+E +          
Sbjct:  20 KAINVSGFDSMTPVQASTIPMFAKNKDVVVESVTGSGKTIAFVIPILEKIISEGINNSKF  79

Query: 279 PRNGTGAIIIAPTRELAMQIFGVLHDLASHH----HQTRAIVMGGANR---RTEAEKLIN 331
            +    ++I+APTREL+MQI  V+     H+    +  R+ ++ G N    R +   L++
Sbjct:  80 KKGHFYSLILAPTRELSMQIQNVVSSFLEHYPEDQYPIRSQLVVGTNEKSVRDDVNTLLD 139

Query: 332 G-TNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
               IL+ TPGR+LD LQS           +V+DEADR L++ F +++ +IL +LPK R+
Sbjct: 140 ERPQILIGTPGRVLDFLQSP-SVKTSSCGMVVLDEADRLLDVSFFKDVEKILNVLPKQRR 198

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T LFSAT ++    + K   +  P+ + ++++   A    L   ++++  E++ + L   
Sbjct: 199 TGLFSATISSAGTLIFKTGLRN-PVKITVNSQGKNAPTT-LNLFYSVMKPEEKLQNLIHI 256

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYI---------DVPVLDLHGK---QKQSKRTST 498
           +   + KK IV+ S+C  V F+ + L Y+         D+ V+ +HGK   Q + K  ST
Sbjct: 257 MNNIRFKKCIVYFSTCVSVTFFYQYLKYLQQTDKTLREDLQVISIHGKLTTQSRRKALST 316

Query: 499 FFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAI 558
           F E        LL TDVAARG+DIP VD ++Q DPP +   ++HR GRT R  +  GRAI
Sbjct: 317 FTE--SLSDCILLTTDVAARGIDIPDVDLVLQIDPPTDADIFLHRCGRTGRA-NKIGRAI 373

Query: 559 LFLLPS-EVGFLQHLRDAKVPLNEYEFPKEKLA-----DIQTQLEKLV---EGNYYLQKS 609
           +FL    E  ++  +    V + E +  K K++     +   +  K +     NY L   
Sbjct: 374 VFLNEGREEDYIPFMEVKNVDIEETDINKNKISNDNNDEFYQRFTKWLLSDRANYDLSVK 433

Query: 610 ARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           +   + ++++ Y+ HS   +F +  LD  ++ K +G    PR+
Sbjct: 434 S---YVAFIRYYSKHSATSIFRLQSLDYVSLGKMYGLFRLPRM 473

gb|AAH11321.1| Ddx27 protein [Mus musculus]
(572 aa)

Score: 205 bits (522), Expect: 3.39557e-51
Length: 396, Idn/Pos/Gap = 146/221/17 (36%/55%/4%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLYKA 275
           LS P L+ I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P++E L+YK 
Sbjct:   3 LSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYK-  61

Query: 276 KWMPRNG--TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGT 333
              PR    T  +++ PTREL +Q+  V   LA     T  + +GG + +++   L    
Sbjct:  62 ---PRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAP 118

Query: 334 NILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTML 393
           +IL+ATPGRL+DHL +   F    +  L++DEAD+ L+  FEE+M EI+R+    RQTML
Sbjct: 119 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADKMLDEYFEEQMKEIIRMCSHHRQTML 178

Query: 394 FSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ--RFRLLFTF 450
           FSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  R  ++   
Sbjct: 179 FSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIVAAL 235

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L R     +++F  +         LL  + + V +LHG   Q++R      F   +   L
Sbjct: 236 LMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQIDIL 295

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFL 569
           + TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +   E   L
Sbjct: 296 VATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARA--GRAGRSVSLVGEEERKML 353

Query: 570 QHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
           + + + AK P+     P++ +   + ++EKL +  Y
Sbjct: 354 KEIVKAAKAPVKARILPQDVILKFRDKIEKLEKDVY 389

ref|NP_464392.1| hypothetical protein lmo0866 [Listeria monocytogenes EGD-e]
emb|CAC98944.1| lmo0866 [Listeria monocytogenes]
pir||AB1183 ATP-dependent RNA helicase homolog lmo0866 [imported] - Listeria monocytogenes (strain EGD-e)
(520 aa)

Score: 205 bits (521), Expect: 4.18315e-51
Length: 360, Idn/Pos/Gap = 128/196/9 (35%/54%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F    L E  ++ +  MGF   T IQ + IPL L G+D++  A+TG+GKT AF +P++ 
Sbjct:   3 KFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGLPMIH  62

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            + +      N   A+IIAPTRELA+Q+   L+ L+   H     V GG++   +   L 
Sbjct:  63 KIDQKS----NNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK 118

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
               I+V TPGR+LDH+ + R    +H+  LV+DEAD  L +GF +++  IL+ +P  RQ
Sbjct: 119 KNPQIVVGTPGRILDHI-NRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQ 177

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    +  + +  F   P  + I A++  A +  ++Q F  V  +++F +L   
Sbjct: 178 TLLFSATMPDPIRRIGE-RFMHSPELIRIKAKEMTALL--IEQFFVKVHEKEKFDVLSRL 234

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     +  IVF  +   V   +  L+        +HG   Q+KR S   +F   +   L
Sbjct: 235 LDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVL 294

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLDI  V  +  YD P +P+ Y+HR+GRT R     G AI F+ P E+G+L+
Sbjct: 295 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRA-GKEGMAITFVQPREMGYLR 353

emb|CAA21146.1| SPBC24C6.02 [Schizosaccharomyces pombe]
ref|NP_595956.1| putative atp dependent rna helicase [Schizosaccharomyces pombe]
pir||T39966 probable atp dependent rna helicase - fission yeast  (Schizosaccharomyces pombe)
(606 aa)

Score: 205 bits (521), Expect: 4.25354e-51
Length: 465, Idn/Pos/Gap = 146/236/31 (31%/50%/6%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F S+ + +     +   GF +MT +QA AIPL L  +D++  A TGSGKTLA+L+P  + 
Sbjct:   3 FQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFDK  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQT--------RAIVMGGANRR 323
           + + +     G GA+I+APTRELA QIF V  +L ++   +          + +GG    
Sbjct:  63 VTR-RDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTL 121

Query: 324 TEAEKLINGTN--ILVATPGRL---LDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEM 378
           T         N  +++ TPGRL   L H+ S      +HL  L++DEAD  +++GF+  +
Sbjct: 122 TNDLASFREKNPSVVIGTPGRLNEMLSHISS------KHLEILILDEADTLIDMGFQRTL 175

Query: 379 HEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQP---VATVEGLQQGF 435
             I+  LPK R+T LFSAT    V    K++  +  + + +          T   L    
Sbjct: 176 QSIISQLPKQRRTGLFSATMNDTVSSFLKIAGLRNSVRVSVTVTSKKIDTRTPSSLAIQS 235

Query: 436 TIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVP--VLDLHGKQKQS 493
            ++P   + + +   L   + +K IVF SSC  V+++  L     +P  ++ LHG+Q QS
Sbjct: 236 LVIPPIYKVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQS 295

Query: 494 KRTSTFFEFARREHATLL-CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            R+  F +F +    T+L  TD+A+RGLDIP VD+++Q DPP +PK + HR GR  R   
Sbjct: 296 NRSRNFEKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGR 355

Query: 553 GRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKE-----KLADIQTQLEKLVEGNYYLQ 607
                +L     E  + + LR  KVP+   + P E     +L  +  +L K+V  +  L 
Sbjct: 356 AGVAIVLLNDGREEEYEELLRVRKVPITRIDTPIEALDLSRLKVLTHELRKIVSKDRDLY 415

Query: 608 KSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
                 F S+++AY  H    +F + +LD+  +A ++     P++
Sbjct: 416 DKGLRAFVSHVRAYTKHHASFIFRIKDLDLGQLATAYALLHLPKM 460

gb|AAQ14890.1| helicain C [Homo sapiens]
(758 aa)

Score: 205 bits (521), Expect: 4.50937e-51
Length: 560, Idn/Pos/Gap = 175/261/128 (31%/46%/22%)

Query: 183 SPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGF------------ 230
           SP   S+S+   +++E+    +  L  +  D   L  P ++ ++E  F            
Sbjct: 180 SPKKHSVSTSDRNQEERQCIKTSSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHELGLHP 239

Query: 231 ------------ARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAK 276
                       + MT +Q ++IP+ L GRD L  ++TGSGKTLA+ IP+V+ L   ++K
Sbjct: 240 HLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESK 299

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNI 335
               +G  A+++ PTRELA+Q F  +  L          ++MGG  R++E  +L  G NI
Sbjct: 300 IQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINI 359

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP---KTRQTM 392
           L++TPGRL+DH++ST+   F  LR+LV DEADR L++GFE+++  IL  +    + RQ +
Sbjct: 360 LISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNV 419

Query: 393 LFSATQTTKVEDLAKVSFQQKPLHLGI------------------------DAEQPVATV 428
           L SAT T  V  LA +S    P+ + +                        D     A  
Sbjct: 420 LLSATLTEGVTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIP 478

Query: 429 EGLQQGFTIVPSEQRFRLLFTFL----KRNQRKKIIVFMSSCNGVKFYAELL-------- 476
           E L+Q  T+VPS+ R   L  F+    K  + +K++VF SSC  V+F+  L         
Sbjct: 479 ESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLLSSS 538

Query: 477 ----------NYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVD 526
                       + +  L LHG  +Q +RT+ F EF+      LLCTDVAARGLD+P V 
Sbjct: 539 GAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVT 598

Query: 527 WIVQYDPP--DEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEF 584
           WIVQ      +EP            G+   G A  F L         LR           
Sbjct: 599 WIVQNTSTGLEEPP-----------GLAAMGAACSFWL---------LR----------- 627

Query: 585 PKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASH--SMKDVFNVHELDIAAVAK 642
                        + +   + L KS     +S++QAYA++   +K +F+V  L +  VAK
Sbjct: 628 ------------RQNMSTRWLLTKST---LQSFIQAYATYPRELKHIFHVRSLHLGHVAK 672

Query: 643 SFGFSAPPRICLDVLERAKK 662
           SFG    PR  L  L R K+
Sbjct: 673 SFGLRDAPR-NLSALTRKKR 691

emb|CAA63149.1| RNA helicase p54 [Xenopus laevis]
sp|P54824|DDX6_XENLA ATP-dependent RNA helicase p54 (Xp54)
(481 aa)

Score: 205 bits (521), Expect: 5.19658e-51
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GKT A+LIP++
Sbjct:  95 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKTGAYLIPLL 154

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 155 ERLD----LKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 210

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 211 LDDTVHVVIATPGRILDLIKKGVAKV-DHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKN 269

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+    +  Q KP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 270 RQILLYSATFPLSVQKFMTLHLQ-KPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 325

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 326 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 385

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 386 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 429

ref|YP_016853.1| atp-dependent rna helicase, dead/deah box family [Bacillus anthracis str. 'Ames Ancestor']
ref|NP_842800.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. Ames]
ref|YP_034574.1| DEAD/DEAH box helicase [Bacillus thuringiensis serovar konkukian str. 97-27]
ref|YP_026518.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. Sterne]
ref|NP_654177.1| DEAD, DEAD/DEAH box helicase [Bacillus anthracis str. A2012]
gb|AAP24286.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. Ames]
ref|ZP_00238196.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus G9241]
gb|EAL14225.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus G9241]
gb|AAT61332.1| DEAD/DEAH box helicase [Bacillus thuringiensis serovar konkukian str. 97-27]
gb|AAT29328.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. 'Ames Ancestor']
gb|AAT52569.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. Sterne]
(528 aa)

Score: 204 bits (520), Expect: 5.60184e-51
Length: 375, Idn/Pos/Gap = 133/207/10 (35%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  L+ +E MGF   T IQA  IP AL G+DI+  A+TG+GKT AF +P+++ 
Sbjct:   4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +   K         I+IAPTRELA+Q+   L+ +  H       + GG +   +   L  
Sbjct:  64 VDTHK----ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+V TPGR+LDH+ + +    +++  +V+DEAD  L +GF E++  IL  +P+T QT
Sbjct: 120 HPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT    +  +A+  F  +P H+ + A++   T+  +QQ +  V  +++F +L   L
Sbjct: 179 LLFSATMPDPIRRIAE-RFMTEPQHIKVKAKE--VTMPNIQQFYLEVQEKKKFDVLTRLL 235

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                +  IVF  +   V   +E LN        +HG   Q+KR S   +F       L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TDVAARGLDI  V  +  +D P +P+ Y+HR+GRT R    +G A+LF+ P E G L++
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESGQLKN 354

Query: 572 L-RDAKVPLNEYEFP 585
           + R  K  ++  + P
Sbjct: 355 IERTTKRKMDRMDAP 369

ref|NP_925271.1| probable ATP-dependent RNA helicase [Gloeobacter violaceus PCC 7421]
dbj|BAC90266.1| gll2325 [Gloeobacter violaceus PCC 7421]
(384 aa)

Score: 204 bits (520), Expect: 5.64878e-51
Length: 364, Idn/Pos/Gap = 135/197/8 (37%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L    +R +E++GF + T IQ  AIP AL+GRD+LA A TGSGKT AFL+PI++ 
Sbjct:   3 FADLQLHPDLVRAVEQLGFTQPTPIQTLAIPPALAGRDVLACAMTGSGKTAAFLLPILQQ  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L      PR+ T A+++ PTRELA QI   L  LA +     A ++GG +   +A     
Sbjct:  63 LIA---QPRSTTRALVLTPTRELAGQIEMHLGQLARYSALRGASIIGGVSPEPQARAFHK 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G  +L+ TPGRLLDH       +  +L  LV+DEADR LE+GF  ++  ILR     RQT
Sbjct: 120 GVEVLIGTPGRLLDHFDQPYARL-ANLEILVLDEADRMLEMGFLPDIRRILRHTGHRRQT 178

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           + FSAT    +  LA     + P+ L  + E+  A   G+      V    + + L   L
Sbjct: 179 LFFSATMPGPIAKLA-TEILRNPVTL--NQERKAAPAVGITHSVYPVAQNLKSKFLLELL 235

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           +R   +++IVF  + +     +E L+   +    +HG + Q +RT     F   ++  L+
Sbjct: 236 EREGMRQVIVFTRTKHRANRLSEYLSKARISCERIHGNRSQGQRTEALAGFKSGKYRVLV 295

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TD+A+RG+DI A+  +V +D P   ++YIHRVGRTAR     G A  F+ P E   L+ 
Sbjct: 296 ATDIASRGIDIEALGHVVNFDVPQAAEDYIHRVGRTARA-ERTGDAFTFVSPEEEDQLRA 354

Query: 572 LRDA 575
           +  A
Sbjct: 355 IERA 358

ref|NP_976595.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus ATCC 10987]
gb|AAS39203.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus ATCC 10987]
(525 aa)

Score: 204 bits (520), Expect: 6.24364e-51
Length: 375, Idn/Pos/Gap = 133/207/10 (35%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  L+ +E MGF   T IQA  IP AL G+DI+  A+TG+GKT AF +P+++ 
Sbjct:   4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +   K         I+IAPTRELA+Q+   L+ +  H       + GG +   +   L  
Sbjct:  64 VDTHK----ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+V TPGR+LDH+ + +    +++  +V+DEAD  L +GF E++  IL  +P+T QT
Sbjct: 120 HPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT    +  +A+  F  +P H+ + A++   T+  +QQ +  V  +++F +L   L
Sbjct: 179 LLFSATMPDPIRRIAE-RFMTEPQHIKVKAKE--VTMPNIQQFYLEVQEKKKFDVLTRLL 235

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                +  IVF  +   V   +E LN        +HG   Q+KR S   +F       L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TDVAARGLDI  V  +  +D P +P+ Y+HR+GRT R    +G A+LF+ P E G L++
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESGQLKN 354

Query: 572 L-RDAKVPLNEYEFP 585
           + R  K  ++  + P
Sbjct: 355 IERTTKRKMDRMDAP 369

ref|NP_918000.1| DEAD box protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC10155.1| DEAD box protein-like [Oryza sativa (japonica cultivar-group)]
dbj|BAC07111.1| DEAD box protein-like [Oryza sativa (japonica cultivar-group)]
(501 aa)

Score: 204 bits (520), Expect: 6.78695e-51
Length: 358, Idn/Pos/Gap = 134/194/13 (37%/54%/3%)

Query: 209 PHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI 268
           P  F  L LS+  +   + +G    T +Q R IP AL GRD+L  A TGSGKT AF +PI
Sbjct:  76 PSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPI 135

Query: 269 VELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEK 328
           +  L +  +    G  A+ +APTRELA Q+      L +         +GG +   +A+ 
Sbjct: 136 LHRLGEDPY----GVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKG 191

Query: 329 LINGTNILVATPGRLLDHLQSTRGF--VFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           L    +++VATPGR+   +        VF   +FLV+DEADR L+I FEE++  I   LP
Sbjct: 192 LARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLP 251

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K RQT LFSAT +  +  L ++S          +A +   TV+ L+Q +  VP + +   
Sbjct: 252 KKRQTFLFSATISDNLRSLLELSGNNSYF---FEAYEGFKTVDTLKQLYIHVPPDAKELY 308

Query: 447 LFTFLKR---NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
           LF  L +   +  + +IVF+S+C   ++   LL  +  P + LH  + QS+R +    F 
Sbjct: 309 LFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFK 368

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFL 561
             +   LL TDVA+RGLDI  VD ++ YD P  P++YIHRVGRTAR   G G +I F+
Sbjct: 369 SSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRG-GLSISFI 425

ref|YP_081836.1| DEAD/DEAH box helicase [Bacillus cereus ZK]
gb|AAU20012.1| DEAD/DEAH box helicase [Bacillus cereus ZK]
(528 aa)

Score: 204 bits (519), Expect: 7.25544e-51
Length: 375, Idn/Pos/Gap = 133/207/10 (35%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  L+ +E MGF   T IQA  IP AL G+DI+  A+TG+GKT AF +P+++ 
Sbjct:   4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +   K         I+IAPTRELA+Q+   L+ +  H       + GG +   +   L  
Sbjct:  64 VDTHK----ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+V TPGR+LDH+ + +    +++  +V+DEAD  L +GF E++  IL  +P+T QT
Sbjct: 120 HPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT    +  +A+  F  +P H+ + A++   T+  +QQ +  V  +++F +L   L
Sbjct: 179 LLFSATMPDPIRRIAE-RFMTEPQHIKVKAKE--VTMPNIQQFYLEVQEKKKFDVLTRLL 235

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                +  IVF  +   V   +E LN        +HG   Q+KR S   +F       L+
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TDVAARGLDI  V  +  +D P +P+ Y+HR+GRT R    +G A+LF+ P E G L++
Sbjct: 296 ATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESGQLKN 354

Query: 572 L-RDAKVPLNEYEFP 585
           + R  K  ++  + P
Sbjct: 355 IERTTKRKMDRMDAP 369

gb|EAK91916.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
gb|EAK91898.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
(631 aa)

Score: 204 bits (519), Expect: 7.31623e-51
Length: 475, Idn/Pos/Gap = 143/237/52 (30%/49%/10%)

Query: 224 GIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMP---- 279
            I  MG+  MT +QA  IPL    +D++  A TGSGKTL+F+IP+++ +    + P    
Sbjct:  24 AISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGKTLSFVIPVLQKISDRLYKPDSDG  83

Query: 280 -------RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-------TRAIVMGGANRRTE 325
                  R    +I+++PTRELA QI  V + +  +  +       T+ +V    N R +
Sbjct:  84 DLPEPVKRGHMLSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVRED 143

Query: 326 AEK-LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
             + L N   IL+ TPGR+L+ L S++      L  +++DEAD+ L+  FE+++  IL+ 
Sbjct: 144 LNQFLTNQPQILIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKK 203

Query: 385 LPKTRQTMLFSATQT--------TKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT 436
           LPK R+T LFSAT +        T + +  KV  + K  + G  +  P    + LQ  + 
Sbjct: 204 LPKQRRTGLFSATISSAGNTIFRTGMNNPVKVQVKSKN-YFGEQSNSP----KSLQLSYM 258

Query: 437 IVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI------DVPV--LDLHG 488
           ++  E +   L T L + Q KK IV+  +C  VK + ++ N +      D P+    LHG
Sbjct: 259 MINPELKITTLLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHG 318

Query: 489 KQKQSKRTSTFFEFARRE----HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRV 544
           +     R  T   F + +       L+ TDVAARG+DIP VD ++Q DPP +P  ++HR 
Sbjct: 319 QLNTKSRLKTLDNFTQGDINLYKHILMTTDVAARGIDIPDVDLVIQIDPPTDPNVFLHRC 378

Query: 545 GRTARGVHGRGRAILFLLPS--EVGFLQHLRDAKVPLNEYEFP-----KEKLADIQTQLE 597
           GRT R  +  GRAI+ L  +  E  ++  +    + L + + P     K    + Q +L 
Sbjct: 379 GRTGRA-NKVGRAIVMLNDNCQEEDYIGFMEVKGIFLTKQDIPTSSATKNLHENFQIKLR 437

Query: 598 KLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           + +  +    + A   +  +++ Y+ H    +F +  LD   +AK +G    P++
Sbjct: 438 QYMLEDRARHELAVKSYVGFIRYYSKHIASSIFRLATLDYLGIAKMYGLLRLPKM 492

gb|EAK92176.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
gb|EAK92127.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
(631 aa)

Score: 204 bits (519), Expect: 7.37753e-51
Length: 475, Idn/Pos/Gap = 143/237/52 (30%/49%/10%)

Query: 224 GIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMP---- 279
            I  MG+  MT +QA  IPL    +D++  A TGSGKTL+F+IP+++ +    + P    
Sbjct:  24 AISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGKTLSFVIPVLQKISDRLYKPDSDG  83

Query: 280 -------RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-------TRAIVMGGANRRTE 325
                  R    +I+++PTRELA QI  V + +  +  +       T+ +V    N R +
Sbjct:  84 DLPEPVKRGHMLSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVRED 143

Query: 326 AEK-LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
             + L N   IL+ TPGR+L+ L S++      L  +++DEAD+ L+  FE+++  IL+ 
Sbjct: 144 LNQFLTNQPQILIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKK 203

Query: 385 LPKTRQTMLFSATQT--------TKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT 436
           LPK R+T LFSAT +        T + +  KV  + K  + G  +  P    + LQ  + 
Sbjct: 204 LPKQRRTGLFSATISSAGNTIFRTGMNNPVKVQVKSKN-YFGEQSNSP----KSLQLSYM 258

Query: 437 IVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI------DVPV--LDLHG 488
           ++  E +   L T L + Q KK IV+  +C  VK + ++ N +      D P+    LHG
Sbjct: 259 MINPELKITTLLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHG 318

Query: 489 KQKQSKRTSTFFEFARRE----HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRV 544
           +     R  T   F + +       L+ TDVAARG+DIP VD ++Q DPP +P  ++HR 
Sbjct: 319 QLNTKSRLKTLDNFTQGDINLYKHILMTTDVAARGIDIPDVDLVIQIDPPTDPNVFLHRC 378

Query: 545 GRTARGVHGRGRAILFLLPS--EVGFLQHLRDAKVPLNEYEFP-----KEKLADIQTQLE 597
           GRT R  +  GRAI+ L  +  E  ++  +    + L + + P     K    + Q +L 
Sbjct: 379 GRTGRA-NKVGRAIVMLNDNCQEEDYIGFMEVKGIFLTKQDIPTSSATKNLHENFQIKLR 437

Query: 598 KLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           + +  +    + A   +  +++ Y+ H    +F +  LD   +AK +G    P++
Sbjct: 438 QYMLEDRARHELAVKSYVGFIRYYSKHIASSIFRLATLDYLGIAKMYGLLRLPKM 492

ref|YP_146079.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
dbj|BAD74511.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
(467 aa)

Score: 204 bits (519), Expect: 7.88679e-51
Length: 362, Idn/Pos/Gap = 132/201/11 (36%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  ++ IE MGF   T IQA+ IPL+L  +D++  A+TG+GKT AF IPIVE 
Sbjct:   4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +     +  +   A+++APTRELA+Q+   L+ + +        + GG +   +   L  
Sbjct:  64 VN----VKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKK 119

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
             +++V TPGR++DH+   RG +  EH+  +V+DEAD  L +GF E++  IL  +P  RQ
Sbjct: 120 HPHVIVGTPGRIIDHIN--RGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQ 177

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    +  +A+  F  +P  + + A++   TV  +QQ +  V  +++F +L   
Sbjct: 178 TLLFSATMPDPIRRIAE-RFMNEPELVKVKAKE--MTVPNIQQYYLEVHEKKKFDILTRL 234

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     +  IVF  +   V   AE LN        +HG   Q+KR S   +F       L
Sbjct: 235 LDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEIL 294

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLDI  V  +  +D P +P+ Y+HR+GRT R     G A+ F+ P E+G L 
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKTGVAMTFVTPREIGQLH 353

Query: 571 HL 572
           H+
Sbjct: 354 HI 355

pdb|1S2M|A Chain A, Crystal Structure Of The Dead Box Protein Dhh1p
(400 aa)

Score: 204 bits (519), Expect: 8.0195e-51
Length: 361, Idn/Pos/Gap = 127/194/12 (35%/53%/3%)

Query: 194 ASEQEQPKPSSGLLTP-HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILA 252
            S+  +P+    L T  + F+   L    L GI E GF + + IQ  AIP+A++GRDILA
Sbjct:   4 GSKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILA  63

Query: 253 SARTGSGKTLAFLIPIVELLYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDLASHHHQ 311
            A+ G+GKT AF+IP +E     K  P+ N   A+I+ PTRELA+Q   V+  L  H   
Sbjct:  64 RAKNGTGKTAAFVIPTLE-----KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGI 118

Query: 312 TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLE 371
           +  +  GG N R +  +L    +ILV TPGR+LD L S +          ++DEAD+ L 
Sbjct: 119 SCMVTTGGTNLRDDILRLNETVHILVGTPGRVLD-LASRKVADLSDCSLFIMDEADKMLS 177

Query: 372 IGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGL 431
             F+  + +IL  LP T Q++LFSAT    V++   V    KP  + +  E    T++G+
Sbjct: 178 RDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFM-VKHLHKPYEINLMEE---LTLKGI 233

Query: 432 QQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQK 491
            Q +  V   Q+   L T   + Q  + I+F +S N V+  A+ +  +       H + K
Sbjct: 234 TQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMK 293

Query: 492 QSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGV 551
           Q +R   F EF + +  TL+C+D+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  
Sbjct: 294 QQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFG 353

Query: 552 H 552
           H
Sbjct: 354 H 354

emb|CAA10162.1| RH27 helicase [Arabidopsis thaliana]
pir||T51352 RNA helicase RH27 [imported] - Arabidopsis thaliana  (fragment)
(181 aa)

Score: 204 bits (519), Expect: 8.79038e-51
Length: 178, Idn/Pos/Gap = 95/126/1 (53%/70%/0%)

Query: 417 LGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ-RKKIIVFMSSCNGVKFYAEL 475
           + +D  +   T EGL+QG+ +VPS  R   L TFLKR Q +KKI+VF S+C   KF+AEL
Sbjct:   1 IDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAEL  60

Query: 476 LNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPD 535
             YI    L++ G   Q+KRT TF +F + E   LLCT+VAARGLD P VDWIVQYDPPD
Sbjct:  61 FRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPD 120

Query: 536 EPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQ 593
            P +YIHRVGRTARG   +G+A+L L P E+ F+Q+L+ AK+P+ E+EF ++KL D++
Sbjct: 121 NPTDYIHRVGRTARGEGAKGKALLVLTPQELKFIQYLKAAKIPVEEHEFEEKKLLDVK 178

ref|NP_325900.1| ATP-DEPENDENT RNA HELICASE [Mycoplasma pulmonis UAB CTIP]
emb|CAC13242.1| ATP-DEPENDENT RNA HELICASE [Mycoplasma pulmonis]
pir||E90520 atp-dependent rna helicase [imported] - Mycoplasma pulmonis  (strain UAB CTIP)
(480 aa)

Score: 204 bits (519), Expect: 8.86403e-51
Length: 384, Idn/Pos/Gap = 129/202/11 (33%/52%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF  + +    L+ ++E+GF + T+IQ   +P A  G+DI+  A+TG+GKT AF IPI+ 
Sbjct:   2 RFTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILS  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            L  +     N    ++IAPTRELA QI+  L+ L  +     A+++GG +   +   L 
Sbjct:  62 NLDCSI----NRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALN 117

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +G NI+VATPGRL D L   +     H++   +DEAD  L+IGF  E+ +I+  LPK RQ
Sbjct: 118 SGVNIVVATPGRLEDLLAQNK-IDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQ 176

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
              F+AT   K + L++    +  +   I     + T E + Q F +V  E++   L  F
Sbjct: 177 NFFFTATFDEKTKKLSQEITNEAKM---ISMSSGLETTEKIDQNFVVVSEEEKLITLVKF 233

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L   +    ++F  +   V   A  L  +    + + G   Q  RTS    F  ++   +
Sbjct: 234 LDFKKPTASVIFGRTKRRVDELASALQELGFSAVGIQGDMVQKDRTSVLNRFKDQKVNII 293

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL- 569
           + TDV ARG+D+  VD +  +D P+E + Y HR+GRT RG    G+AI F+   EVG++ 
Sbjct: 294 VATDVMARGIDVSHVDLVFNFDLPEEIEYYTHRIGRTGRGTR-IGQAISFVKKPEVGYIY 352

Query: 570 QHLRDAKVPLNEYEFP-KEKLADI 592
           + + + K  + E   P KE L  +
Sbjct: 353 KIMTETKSIIKEISIPSKEHLQTV 376

emb|CAG31824.1| hypothetical protein [Gallus gallus]
(483 aa)

Score: 204 bits (518), Expect: 9.01319e-51
Length: 344, Idn/Pos/Gap = 119/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V EH++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-EHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430

ref|NP_634580.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
gb|AAM32252.1| ATP-dependent RNA helicase [Methanosarcina mazei Goe1]
(429 aa)

Score: 204 bits (518), Expect: 1.00458e-50
Length: 383, Idn/Pos/Gap = 133/204/13 (34%/53%/3%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           LT + F  L LS   L+ I+E GF   T IQ ++IPL L+G D++  A TGSGKTL+F  
Sbjct:  26 LTMNNFKKLGLSNAVLKSIDEHGFESPTAIQEKSIPLILAGEDVIGGAATGSGKTLSFAS  85

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
            I++   K K     G  A+I+ PTRELA Q+   L   + +     A + GG    T+ 
Sbjct:  86 GILQNSEKGK-----GIQALILTPTRELAEQVANSLRKFSKYDPLNIASIYGGVGINTQI 140

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           ++L N   ++V TPGRLLDH+ S       +++ LV+DEAD   ++GF+ ++ +I++  P
Sbjct: 141 KELKNA-EVVVGTPGRLLDHI-SRNTIKLNNVKTLVLDEADHMFDMGFKVDVEKIIKECP 198

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           + RQT+LFSAT T  +  L++  + + P+ +  ++       + L Q    V  + +  L
Sbjct: 199 QNRQTLLFSATITKDIVRLSR-KYMENPVRVSTES---YIDPQKLNQVVYKVQDDMKLSL 254

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L+  +    +VF ++       A+ L    +  + +HG   Q++RT    +F    
Sbjct: 255 LVYLLQNEKSNLGMVFCNTKRNTDKVAKNLRKSSINAVAIHGGLTQNERTRILEKFHSGN 314

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE- 565
              L+CTDVA RGLDI  V  +  YD P E K+YIHR+GRTAR     G+AI  L  ++ 
Sbjct: 315 IGVLVCTDVAGRGLDIQGVSHVYNYDIPRESKQYIHRIGRTARA-GTEGKAINILSKNDH 373

Query: 566 VGFLQHLRDAKVPLNEYEFPKEK 588
             F+  L+D  V + E   P  K
Sbjct: 374 ANFMSVLKDNDVDIKEQALPALK 396

ref|ZP_00158874.1| COG0513: Superfamily II DNA and RNA helicases [Anabaena variabilis ATCC 29413]
(426 aa)

Score: 204 bits (518), Expect: 1.11968e-50
Length: 425, Idn/Pos/Gap = 139/224/19 (32%/52%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +R + E+G+ + T IQ ++IP  LSGRD+LA A+TG+GKT +F +P++ L
Sbjct:   3 FSHLGLSNEIIRAVTELGYTKPTPIQMQSIPAVLSGRDLLAGAQTGTGKTASFTLPLLHL  62

Query: 272 LYKAKWMPRNGTG----AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           L +      +       A+I+ PTRELA Q+   + D   + +    ++ GG +   + +
Sbjct:  63 LSQDSLKSASSPSSPIRALILTPTRELAAQVESSVRDYGKYLNLNSMVMFGGVSINPQKQ 122

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           +L    +ILVATPGRLLDH+Q  +G V    +  LV+DEADR L++GF  ++  IL +LP
Sbjct: 123 RLKGRVDILVATPGRLLDHVQ--QGTVNLSQIEILVLDEADRMLDMGFIRDIRRILSLLP 180

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K RQ +LF AT + K+++LA     +  +   I+  +   T + + Q    +  +++  L
Sbjct: 181 KQRQNLLFFATFSDKIKELAAGLLNRPQM---IEVARRNVTADTVTQKVYKIERDRKRDL 237

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   ++++   +++VF  +  G     + L +  +  L +HG + QS RT    +F    
Sbjct: 238 LAHLIRKDNWYQVLVFTRTKYGADRLVKQLGHERIQALAIHGNKSQSARTHALAKFKNGS 297

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TD+AARGLDI  + ++V +D P  P++Y+HR+GRT R     G A+  +   E 
Sbjct: 298 LQVLVATDIAARGLDISELPYVVNFDLPYVPEDYVHRIGRTGRA-GASGEAVSLVSADEY 356

Query: 567 GFLQHLRDAKVPLNEYEFPKEKLADI----QTQLEKLVEGNYYLQKSARDGFRSYLQAYA 622
             L  +      L E   P E +A I    QT+ E   +      K ++   RS  QA  
Sbjct: 357 HLLADIEK----LIEKRLPFELVAGIGANSQTKPEPSQDERKQKPKDSKHQPRSAAQAVP 412

Query: 623 SHSMK 627
             S K
Sbjct: 413 KKSGK 417

ref|YP_107324.1| putative ATP-dependent RNA helicase 1 [Burkholderia pseudomallei K96243]
ref|YP_102079.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
emb|CAH34688.1| putative ATP-dependent RNA helicase 1 [Burkholderia pseudomallei K96243]
gb|AAU48716.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
(485 aa)

Score: 204 bits (518), Expect: 1.13852e-50
Length: 352, Idn/Pos/Gap = 125/197/8 (35%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL L+EP +R + E+G+ + T IQA+AIP  L G D+LA A+TG+GKT  F +PI++ 
Sbjct:   3 FASLGLAEPLVRAVNELGYTQPTPIQAQAIPAVLGGGDLLAGAQTGTGKTAGFTLPILQR  62

Query: 272 L---YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEK 328
           L   Y      R    A+I+ PTRELA Q+   +   + +      ++ GG +   + + 
Sbjct:  63 LHAFYAENRSARRAVRALILTPTRELAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDA 122

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L  G +I+VATPGRLLDH+Q  +      L  LV+DEADR L++GF  ++  +L  LP  
Sbjct: 123 LKRGVDIVVATPGRLLDHMQQ-KTIDVSSLDILVLDEADRMLDMGFIHDIKRVLAKLPAK 181

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +LFSAT + +++ LA        L   I+  +   T E + Q    V  +++  LL 
Sbjct: 182 RQNLLFSATFSDEIKSLADSLLDSPAL---IEVARRNTTAETIAQKIHPVDRDRKRELLT 238

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
             ++ +   +++VF  + +G    AE L    +  + +HG + QS RT    EF      
Sbjct: 239 HLIREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALSEFKSSTLQ 298

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAIL 559
            L+ TD+AARG+DI  +  +V +D P+ P++Y+HR+GRT R G +G   +++
Sbjct: 299 VLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGANGEAVSLV 350

dbj|BAA04482.1| RCK [Homo sapiens]
ref|NP_004388.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapiens]
(472 aa)

Score: 204 bits (518), Expect: 1.14806e-50
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  85 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 144

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 145 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 200

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 201 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 259

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 260 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 315

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 316 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 375

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 376 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 419

ref|YP_150494.1| ATP-dependent RNA helicase, stimulated by 23S rRNA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gb|AAV77182.1| ATP-dependent RNA helicase, stimulated by 23S rRNA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
(457 aa)

Score: 203 bits (517), Expect: 1.25842e-50
Length: 352, Idn/Pos/Gap = 131/197/15 (37%/55%/4%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           L    L  + E+G+  MT +QA A+P+ L+G D+   ARTGSGKT AF + ++  +  + 
Sbjct:  10 LPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVSL  69

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRTEAEKLINGTNI 335
           +     T A+++ PTRELA Q+ G L  LA     T+ + + GG     + + L +  +I
Sbjct:  70 FQ----TQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHI 125

Query: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           +VATPGR LDHLQ       + L  LV+DEADR L++GF + + E++R  P TRQT+LFS
Sbjct: 126 IVATPGRQLDHLQK-ETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFS 184

Query: 396 ATQTTKVEDLAKVS--FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR 453
           AT     E +A +S   QQ+P+ + ID    V  +  ++Q F    + ++  LL T L +
Sbjct: 185 ATWP---EAIAAISGRVQQQPIRIEIDT---VDALPAIEQQFFETSAHEKISLLQTLLSQ 238

Query: 454 NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCT 513
           +Q    +VF ++    +   + LN +    L LHG  +Q  R  T   FA      L+ T
Sbjct: 239 HQPASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVAT 298

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
           DVAARGLDI +++ +V Y+   +P+ ++HR+GRTAR     G AI F  P E
Sbjct: 299 DVAARGLDIKSLELVVNYELAWDPEVHVHRIGRTARA-GSSGLAISFCAPEE 349

gb|AAO07553.1| Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
ref|NP_762563.1| Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
(509 aa)

Score: 203 bits (517), Expect: 1.27959e-50
Length: 339, Idn/Pos/Gap = 120/192/4 (35%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS P L+ I+E G+   + IQ +AIP  L G+D++A+A+TG+GKT  F +PI+E 
Sbjct:   3 FTSLGLSAPILKAIQEKGYDTPSPIQLQAIPAILEGKDVMAAAQTGTGKTAGFTLPILER  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L K   +  N   A+I+ PTRELA Q+   +   + H     A+V GG     +  +L  
Sbjct:  63 LAKGPRVRANHIRALILTPTRELAAQVQENVFMYSRHLDLNSAVVFGGVKINPQMLRLRK 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++LVATPGRL+D L S     F+ L  L++DEADR L++GF  ++ +IL +LP  RQ 
Sbjct: 123 GADVLVATPGRLMD-LYSQNAVKFDQLEVLILDEADRMLDMGFIRDIRKILALLPAKRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + ++ +LAK      P+ + ++     +T   ++Q       +++  +L   +
Sbjct: 182 LLFSATFSDEIRELAK-GLVNNPIEISVNPAN--STARTVEQCIYPADVKKKPAMLAKLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K    ++++VF  + +G    A  L    +    +HG + Q  RT    +F   E   L+
Sbjct: 239 KDGDWQQVLVFTRTKHGANRLAAFLTDQGLTAAAIHGNKSQGARTKALADFKSGEVRVLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            TD+AARG+DIP +  +V ++ P   ++Y+HR+GRT R 
Sbjct: 299 ATDIAARGIDIPQLPQVVNFELPKVAEDYVHRIGRTGRA 337

ref|YP_131872.1| putative ATP-dependent RNA helicase [Photobacterium profundum SS9]
emb|CAG22072.1| putative ATP-dependent RNA helicase [Photobacterium profundum SS9]
(455 aa)

Score: 203 bits (517), Expect: 1.46235e-50
Length: 350, Idn/Pos/Gap = 126/194/13 (36%/55%/3%)

Query: 208 TPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIP 267
           TP  F  L L  P L  + E+ + + T IQA+ IP  L+GRD++A A TGSGKT AF +P
Sbjct:  33 TPANFTELGLISPLLARLTELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALP  92

Query: 268 IVELLY-----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQT--RAIVMGGA 320
           +++ L+      +K    N    +I+ PTRELA Q+   +   A H +       V GG 
Sbjct:  93 MLQHLFLQQHLSSKSSKGNYVTRLILVPTRELAKQVADSIKSYAVHFNGAIKTVAVFGGV 152

Query: 321 NRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHE 380
           +  T+   L  GT+ILVATPGRLLD L S+     + ++ LV+DEADR L +GF +E+  
Sbjct: 153 SANTQMLALRGGTDILVATPGRLLD-LISSNAIKLDRVKTLVLDEADRMLSLGFTDELSA 211

Query: 381 ILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPS 440
           +L +LPK +QT+LFSAT   +V+ L      Q+ L+  ++ +   A    L Q    V  
Sbjct: 212 LLGLLPKNKQTLLFSATFPEQVQTLT-----QELLNDPVEIQLQSADASTLVQRVFTVNK 266

Query: 441 EQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFF 500
            ++  LL   +K+N+ ++ ++F+++ N  +  A+ L+   +     HG + Q  RT    
Sbjct: 267 GEKTALLAHLIKQNEWRQALIFVNAKNSCEHLADKLSKRGITAEVFHGDKGQGARTRVLD 326

Query: 501 EFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            F   E   L+ TD+AARGLDI  +  ++ +D P  P +Y+HR+GR+ R 
Sbjct: 327 AFKAGEIEVLIATDIAARGLDIEKLPVVINFDLPRSPSDYMHRIGRSGRA 376

gb|AAF94564.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar eltor str. N16961]
ref|NP_231050.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar eltor str. N16961]
pir||D82203 ATP-dependent RNA helicase RhlE VC1407 [imported] - Vibrio cholerae (strain N16961 serogroup O1)
(397 aa)

Score: 203 bits (517), Expect: 1.49941e-50
Length: 350, Idn/Pos/Gap = 122/195/5 (34%/55%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  ++ + ++G+ + T IQ +AIP+ L GRD++A+A+TG+GKT +F++PI+E 
Sbjct:   3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L + +   +    A+I+ PTRELAMQ+   +             V GG + + + ++LI+
Sbjct:  63 LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLID 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++LVATPGRL+D L   R   FE +  +V+DEADR L++GF E +++I+  LP   Q 
Sbjct: 123 GVDVLVATPGRLMD-LYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + KV +LAK + +  P  + I A Q  A+   + Q    V  + +  LL   +
Sbjct: 182 LLFSATLSRKVRELAKTAVRD-PHEISIAANQ--ASKSNISQWLITVDKDTKSALLSHLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
              Q  + ++F+ + +G       L    +     H  + Q+ R     +F   +   L+
Sbjct: 239 NEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFL 561
            T VAARG+DI  +  +V YD P    EY+HR+GRT R     G AI F+
Sbjct: 299 ATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRA-EAVGEAISFV 347

gb|AAH65007.1| DDX6 protein [Homo sapiens]
(483 aa)

Score: 203 bits (516), Expect: 1.5503e-50
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430

ref|ZP_00245342.1| COG0513: Superfamily II DNA and RNA helicases [Rubrivivax gelatinosus PM1]
(514 aa)

Score: 203 bits (516), Expect: 1.74239e-50
Length: 366, Idn/Pos/Gap = 124/203/11 (33%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L+EP L+ I + G+   T IQ +AIP  + G D+LA A+TG+GKT  F++P++  
Sbjct:   3 FKELGLAEPLLQAIVDAGYETPTPIQKQAIPAVMLGGDLLAGAQTGTGKTAGFVLPMLHR  62

Query: 272 LYKAKWMPRNGTG-----AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           L  A+   ++  G     A+I+ PTRELA Q+   +     H   +  ++ GG   + + 
Sbjct:  63 LM-ARPAVKDARGKSPVRALILTPTRELAAQVEESVRIYGKHAKLSSMVMFGGVGMQPQI 121

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           ++L  G +ILVATPGRLLDH Q  R     H+   V+DEADR L++GF  ++ ++L I+P
Sbjct: 122 DRLKRGVDILVATPGRLLDHHQQ-RTLDLSHVEIFVLDEADRMLDMGFIHDIKKVLAIVP 180

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K +Q++LFSAT + +++ LA        +   I+  +  +TVE + Q    V  +++  L
Sbjct: 181 KQKQSLLFSATFSDEIKTLADRLLNSPQV---IEVARRNSTVETIAQKIHPVDRDKKKEL 237

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   +K     +++VF    +G     E LN   +  + +HG + Q+ RT    +F    
Sbjct: 238 LAHLIKSQDWHQVLVFCRMKHGANRLTEYLNDQRITAMAIHGNKSQTARTKALADFKSGA 297

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TD+AARG+DI  +  +V ++ P+  ++Y+HR+GRT R     G A+  +   E 
Sbjct: 298 LQVLVATDIAARGIDIDQLPHVVNFELPNVSEDYVHRIGRTGRA-GALGEAVSLVCVDED 356

Query: 567 GFLQHL 572
           GFL+ +
Sbjct: 357 GFLRDI 362

ref|ZP_00126173.1| COG0513: Superfamily II DNA and RNA helicases [Pseudomonas syringae pv. syringae B728a]
(442 aa)

Score: 203 bits (516), Expect: 1.80153e-50
Length: 359, Idn/Pos/Gap = 131/197/6 (36%/54%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F SL L EP LR +E +G+   T +Q +AIP  L+GRD++A+A+TG+GKT  F +P+++ 
Sbjct:   3 FASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLLQR  62

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L  +   +  N   A+++APTRELA Q+   +   A H   T     GG +   +  KL 
Sbjct:  63 LTMEGPKVAPNSIRALVLAPTRELADQVHESIRQYAEHLPLTTYAAYGGVSINPQMMKLR 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++LVATPGRLLD L       F  L+ L++DEADR L++GF EE+  I  +LPK RQ
Sbjct: 123 RGVDVLVATPGRLLD-LHRQNAVKFSQLQTLILDEADRMLDLGFAEELRGIYAVLPKQRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT + ++  LA       PL + +      A+   ++Q    V  +++  L    
Sbjct: 182 TLLFSATFSDEIRLLA-AQMLNDPLTIEVSPRNVAAS--SVKQWVVTVDKKRKADLFIHL 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +K+++  +++VF  +  GV    + L  + +    +HG + Q+ R      F   E   L
Sbjct: 239 MKKHRWGQVLVFAKTRVGVDQLVDRLQALGMNADGIHGDKPQATRQRALDRFKSNEVKIL 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           + TDVAARGLDI  +  +V  D P   ++YIHR+GRT R     G AI  +   EV  L
Sbjct: 299 VATDVAARGLDIDDLPTVVNLDLPIVAEDYIHRIGRTGRA-GLTGEAISLVCADEVELL 356

ref|XP_236192.2| PREDICTED: similar to RCK [Rattus norvegicus]
(483 aa)

Score: 203 bits (516), Expect: 1.89401e-50
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQXVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430

ref|NP_937215.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
dbj|BAC97185.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
(509 aa)

Score: 203 bits (516), Expect: 1.92588e-50
Length: 339, Idn/Pos/Gap = 120/192/4 (35%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS P L+ I+E G+   + IQ +AIP  L G+D++A+A+TG+GKT  F +PI+E 
Sbjct:   3 FTSLGLSAPILKAIQEKGYDTPSPIQLQAIPAILEGKDVMAAAQTGTGKTAGFTLPILER  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L K   +  N   A+I+ PTRELA Q+   +   + H     A+V GG     +  +L  
Sbjct:  63 LAKGPRVRANHIRALILTPTRELAAQVQENVFMYSRHLDLNSAVVFGGVKINPQMLRLRK 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++LVATPGRL+D L S     F+ L  LV+DEADR L++GF  ++ +IL +LP  RQ 
Sbjct: 123 GADVLVATPGRLMD-LYSQNAVKFDQLEVLVLDEADRMLDMGFIRDIRKILALLPAKRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + ++ +LAK      P+ + ++     +T   ++Q       +++  +L   +
Sbjct: 182 LLFSATFSDEIRELAK-GLVNNPIEISVNPAN--STARTVEQCIYPADVKKKPAMLAKLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K    ++++VF  + +G    A  L    +    +HG + Q  RT    +F   +   L+
Sbjct: 239 KDGDWRQVLVFTRTKHGANRLAAFLTDQGLTAAAIHGNKSQGARTKALADFKSGDVRVLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            TD+AARG+DIP +  +V ++ P   ++Y+HR+GRT R 
Sbjct: 299 ATDIAARGIDIPQLPQVVNFELPKVAEDYVHRIGRTGRA 337

dbj|BAB81102.1| ATP-dependent RNA helicase [Clostridium perfringens str. 13]
ref|NP_562312.1| ATP-dependent RNA helicase [Clostridium perfringens str. 13]
(528 aa)

Score: 202 bits (515), Expect: 2.09347e-50
Length: 364, Idn/Pos/Gap = 126/196/8 (34%/53%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +FD L L E  L+ I++MGF   ++IQA +IP+AL G DI+  A+TG+GKT AF   I+ 
Sbjct:   5 KFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIIN  64

Query: 271 LL-YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
              +  K   +    A+I+APTRELA+Q+   L  L  H   +   + GG     +   L
Sbjct:  65 NADFSGK---KKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRAL 121

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
            NG +I+V TPGR+LD L   +      + FLV+DEAD  L +GF +++ EI++ L   R
Sbjct: 122 KNGVDIVVGTPGRVLD-LIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDR 180

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QT+LFSAT   +++ LA+   ++   H+ I  ++   TV  ++Q +  +    RF  L  
Sbjct: 181 QTLLFSATMPPQIKKLARNYMKEDTKHIAI--KKSSLTVSKIEQFYFEIKHRDRFETLCR 238

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            L  ++    I+F  +  GV    E +      V  +HG   Q+ R  T  +F       
Sbjct: 239 VLDFDEPNAAIIFCKTKKGVDEVVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDF 298

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ TDVAARG+D+ +V  ++ YD P + + Y+HR+GRT R  +  G A   + P E   L
Sbjct: 299 LVATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRA-NREGVAYSLVTPKEYMML 357

Query: 570 QHLR 573
           + ++
Sbjct: 358 KQIQ 361

gb|AAQ58061.1| ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
ref|NP_900053.1| ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
(472 aa)

Score: 202 bits (515), Expect: 2.1287e-50
Length: 375, Idn/Pos/Gap = 124/205/6 (33%/54%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L++P LR + + G+   T IQA+AIP  L G D+LA+A+TG+GKT  F +P+++L
Sbjct:   6 FADLGLADPLLRAVADTGYTTPTPIQAQAIPQVLQGGDLLAAAQTGTGKTAGFTLPLLQL  65

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L  +         A+++ PTRELA Q+   +   + +      ++ GG N   + + L  
Sbjct:  66 LMCSPSHHAGRPRALVLTPTRELAAQVEESVRTYSKYLPLKSLVMFGGVNINPQIKALRA 125

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +ILVATPGRLLDH+   +      +  LV+DEADR L++GF  ++ ++L  LP  RQ 
Sbjct: 126 PVDILVATPGRLLDHV-GQKTVDLSGVEILVLDEADRMLDMGFIHDIKKVLAKLPAQRQN 184

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + +++ LA        L   ++  +   T E + Q   +V  +++  LL   +
Sbjct: 185 LLFSATFSDEIKALADKLLDNPKL---VEVARRNTTNELVSQKVHLVDRDKKTELLIHLI 241

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           +     +++VF  + +G    AE L+ I +P   +HG + Q+ RT    +F   E   L+
Sbjct: 242 REQNWFQVLVFTRTKHGANRLAEKLDKIGIPAAAIHGNKSQNARTRALADFKSGELQVLV 301

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TD+AARGLDI  +  +V ++ P+ P++Y+HR+GRT R     G A+  +   E  FL+ 
Sbjct: 302 ATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRA-GSPGEALSLVCVDEFSFLRD 360

Query: 572 LRD-AKVPLNEYEFP 585
           +    K+ +  +  P
Sbjct: 361 IEKLIKMSIERFTVP 375

emb|CAE60124.1| Hypothetical protein CBG03667 [Caenorhabditis briggsae]
(565 aa)

Score: 202 bits (515), Expect: 2.21938e-50
Length: 379, Idn/Pos/Gap = 134/204/15 (35%/53%/3%)

Query: 200 PKP---SSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASART 256
           P+P   S   +T  +F  L +S    + ++ M     T +QA  IP  L G DIL  ART
Sbjct:  80 PQPFQISEDNMTTRKFSELGVSSWITQQLQTMHIKTATPVQAACIPRILDGSDILGCART 139

Query: 257 GSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV 316
           G+GKTLAF IPI++ L    +    G  A+I+ PTRELA QI      +        +++
Sbjct: 140 GTGKTLAFAIPILQKLSIDPY----GIYALILTPTRELAFQIADQFTAVGKPITLKCSVI 195

Query: 317 MGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEE 376
           +GG +   +A +L    +I+VATPGRL D ++S    + + ++F V+DEADR LE  + +
Sbjct: 196 VGGRSLIHQARELSERPHIVVATPGRLTDLIESDPEVIAKKIQFFVLDEADRMLEGQYND 255

Query: 377 EMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT 436
           ++  I + +P+ RQT+L SAT T  +  L KVS  +KP       +    TV+ L+Q F 
Sbjct: 256 QLKPIFQSIPEKRQTLLLSATITQNINTLHKVS-TRKPYFFEDKGKDDETTVDRLEQKFV 314

Query: 437 IVPSEQRFRLLFTFLK----RNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQ 492
           + P   +   L   +K    +N +  +++F  +C   +  A +   +   V  LH +  Q
Sbjct: 315 VCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQ 374

Query: 493 SKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            +R +    F  +    ++CTDVA+RGLDIP VD +V ++ P  PK YIHRVGR+AR   
Sbjct: 375 KQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARA-- 432

Query: 553 GR-GRAILFLLPSEVGFLQ 570
           GR G A+ F+   +V  LQ
Sbjct: 433 GRFGSALSFVTQYDVELLQ 451

dbj|BAA77391.1| DEAD box protein [Cavia porcellus]
(472 aa)

Score: 202 bits (515), Expect: 2.37258e-50
Length: 344, Idn/Pos/Gap = 117/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+AL+GRDILA A+ G+GK+ A+LIP++
Sbjct:  85 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALTGRDILARAKNGTGKSGAYLIPLL 144

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 145 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 200

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 201 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 259

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 260 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 315

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 316 TLFPRLQTNQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 375

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 376 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 419

ref|XP_536551.1| PREDICTED: similar to probable RNA helicase (EC 3.6.1.-) RCK - human [Canis familiaris]
(483 aa)

Score: 202 bits (515), Expect: 2.39246e-50
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430

ref|ZP_00338938.1| COG0513: Superfamily II DNA and RNA helicases [Silicibacter sp. TM1040]
(445 aa)

Score: 202 bits (515), Expect: 2.41251e-50
Length: 364, Idn/Pos/Gap = 135/205/8 (37%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F S+ L +     +E MGF   T IQARAIP AL+G+D+L  A+TG+GKT AF +P+V  
Sbjct:   4 FSSMDLPKHLHTRMEAMGFNTPTPIQARAIPHALNGQDVLGLAQTGTGKTAAFGVPLVAQ  63

Query: 272 LYKAKWMPRNGT-GAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           + +    P  GT   +I+APTRELA QI   L  L         +V+GG +   +  +L 
Sbjct:  64 MLEYGRKPAAGTVRGLILAPTRELANQIAETLRGLTEGSPLKTGLVVGGVSINPQIHRLS 123

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            GT+ILVATPGRLLD L   +        FLV+DEAD+ L++GF   + +I  +LP+ RQ
Sbjct: 124 KGTDILVATPGRLLDILDR-KALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEERQ 182

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           TMLFSAT   ++ ++A  ++ + P+   I+   P      + Q    +   ++  LL   
Sbjct: 183 TMLFSATMPKQMNEIAN-AYLKSPVR--IEVTPPGKPAAKVTQSVHFIAKAEKLSLLKEL 239

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L  +  ++ +VF  + +G++   ++L+        +HG + Q +R      F   E   L
Sbjct: 240 LSAHDGERTLVFGRTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVL 299

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFL 569
           + TDVAARGLDIP V ++  Y+ P+ P  Y+HR+GRTAR   G+ G+A+ F  P E+G L
Sbjct: 300 VATDVAARGLDIPDVKYVYNYELPNVPDAYVHRIGRTARA--GKDGQAVAFCAPDEIGDL 357

Query: 570 QHLR 573
           + ++
Sbjct: 358 KAIQ 361

emb|CAG99684.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_454597.1| unnamed protein product [Kluyveromyces lactis]
(596 aa)

Score: 202 bits (515), Expect: 2.43272e-50
Length: 457, Idn/Pos/Gap = 141/238/28 (30%/52%/6%)

Query: 219 EPTLR-GIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYK--- 274
           +P +R  IE MGF  MT +QA  IPL    +D++  + TGSGKT+AF+IPI+E L K   
Sbjct:  15 QPWIRTAIESMGFETMTPVQASTIPLFSGNKDVVVESVTGSGKTIAFVIPILERLIKEEA  74

Query: 275 -AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHH----HQTRAIVMGGANRRTEAEKL 329
            +    ++   ++II+PTRELA QI  V+ D   ++    +  R+ ++ G +  +  + +
Sbjct:  75 NSAKFKKSHFHSLIISPTRELASQIHDVIEDFLKYYPDNLYPIRSQLLVGTSSASVRDDI 134

Query: 330 INGTN----ILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
            + T+    ILV TPGR+LD LQ T          +V+DEAD+ L++ F++++  IL++L
Sbjct: 135 NSFTDNRPQILVGTPGRVLDFLQKT-NVKTASCGTVVLDEADKLLDLNFQKDVETILKML 193

Query: 386 PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR 445
           PK R+T LFSAT  +    + K   +  P+ + + +     +   +   + ++P + + +
Sbjct: 194 PKQRRTGLFSATIESAGAQIFKTGMRN-PVKVAVKSNSSAPSSLSIN--YIVIPPKDKLQ 250

Query: 446 LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--------DVPVLDLHGKQKQSKRTS 497
           LL T L   + KK IV+  +C  V ++   +N++        D+ +  LHGK +   R  
Sbjct: 251 LLLTLLNNYRFKKCIVYFPTCISVTYFYAFINHLKELNLIQDDLKLFSLHGKLQTQSRMK 310

Query: 498 TFFEFARR-EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGR 556
           T   F      A L  TDVAARG+DIP VD ++Q DPP +   +IHR GRT R  +  G+
Sbjct: 311 TLDSFTSNLTDAVLFTTDVAARGIDIPDVDLVIQLDPPTDADIFIHRCGRTGRA-NRIGK 369

Query: 557 AILFLLPS-EVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFR 615
           A++FL    E  ++  L    V L E     + + ++       +  +      +   + 
Sbjct: 370 ALVFLNEGREEDYVPFLEVKNVKLEEESVELKGVENLTKIFHDWILHDRARFDHSVRAYV 429

Query: 616 SYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           ++++ Y+ H+   +F  H +D   VA  +G    PR+
Sbjct: 430 AFIKYYSKHTASSIFRFHSMDFIGVANFYGLLRLPRM 466

emb|CAD70326.1| related to RNA helicase SPB4 [Neurospora crassa]
ref|XP_322638.1| hypothetical protein [Neurospora crassa]
gb|EAA27591.1| hypothetical protein [Neurospora crassa]
(654 aa)

Score: 202 bits (514), Expect: 2.68891e-50
Length: 557, Idn/Pos/Gap = 172/266/63 (30%/47%/11%)

Query: 209 PHRFDSL--PLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           P  +D+L  PL++  L  +  MGF + T +Q   + L    +D++  A TGSGKTLAFLI
Sbjct:  14 PRSWDALTPPLAQWILDYLSSMGFTQPTPVQKSCLELFRGNKDVVVEAVTGSGKTLAFLI  73

Query: 267 PIVE-LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGAN--RR 323
           P+VE LL   +   RN    III+PTRELA QI+ VL  L   H  +   +    +  +R
Sbjct:  74 PVVEKLLRGEEPAKRNHVQGIIISPTRELATQIYNVLVSLVKFHEPSAEAISHAKSDEKR 133

Query: 324 TEAEK-------LINGT---------------NILVATPGRLLDHLQSTR----GFVFEH 357
             A +       L+ GT               N+L+ TPGRL + L S         FE 
Sbjct: 134 PTATQPVVVPQLLVGGTTKAAEDLGTFLRLSPNLLIGTPGRLAELLSSAYVKAPASTFE- 192

Query: 358 LRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLA--------KVS 409
              L++DEADR L++GF  E++ IL  LPK R+T LFSA+ +  VE L         K++
Sbjct: 193 --VLIMDEADRLLDMGFANELNRILGYLPKQRRTGLFSASLSDAVERLITVGLLYPHKIT 250

Query: 410 FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK--KIIVFMSSCN 467
            + K L  G    Q   T   LQ  + + P+ Q+   +   L++ + +  + I+F SSC 
Sbjct: 251 VRVKSLKDG-GIIQERKTPMSLQMSYLVTPASQKMPAIVQLLEKLEPRPQRSIIFFSSCM 309

Query: 468 GVKFYAELLNYI---DVPVLDLHGKQKQSKRTSTFFEFARREHA-TLLCTDVAARGLDIP 523
            VK+++ +L  +      V  LHGK +   R   +  F        LL TD+AARGLDIP
Sbjct: 310 AVKYFSRILGAVLPAGFSVTSLHGKLEPKVREKNYERFVNTTSPMVLLTTDLAARGLDIP 369

Query: 524 AVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYE 583
            VD ++Q+DPP + K +IHR GR  R        +L     E G++Q L   + P+   E
Sbjct: 370 QVDLVIQHDPPTDTKVFIHRCGRAGRAGRRGLAVVLLQPGREEGYVQLLEVRQTPITPLE 429

Query: 584 FPK-----EKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQAYASHSMKDVFNVHELDIA 638
            P      +++  +          +  + + A+  F S+ ++Y  H    +F + +LD  
Sbjct: 430 KPAISVTPDEVERVSAAFRSQALADREIFQMAQLAFVSWTRSYIEHQASSIFRIADLDWL 489

Query: 639 AVAKSFGFSAPPRICLDVLERAKKIRRRGGGG------GFGDEWKNRDRLKDLIRKRLAS 692
            +AK +G    P++      R  KI R  G G       F D+ + + R ++L + +   
Sbjct: 490 DLAKGYGLLELPKM---PEVREAKIDRSLGLGINTEEIPFKDKVREKKRQEELAKWKEEK 546

Query: 693 GQRFRASNPHGKRDEQD 709
            +R +  N   KR + +
Sbjct: 547 AKRAQEENTGDKRKKNE 563

ref|XP_417921.1| PREDICTED: similar to probable RNA helicase (EC 3.6.1.-) RCK - human [Gallus gallus]
(483 aa)

Score: 202 bits (514), Expect: 2.99698e-50
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V EH++ +V+DEA++ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-EHVQMIVLDEANKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430

ref|ZP_00335143.1| COG0513: Superfamily II DNA and RNA helicases [Thiobacillus denitrificans ATCC 25259]
(477 aa)

Score: 202 bits (514), Expect: 3.07294e-50
Length: 363, Idn/Pos/Gap = 129/203/7 (35%/55%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV-E 270
           F SL L+EP LR I + G+   T IQA+AIP  L+G D+LA+A+TG+GKT  F +PI+ +
Sbjct:   7 FASLALAEPILRAIADAGYTAPTPIQAQAIPHVLAGGDLLAAAQTGTGKTAGFTLPILHQ  66

Query: 271 LLYKAKWMPRNGTG-AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L  +A   P+ G    +I+ PTRELA Q+   +     +   T  ++ GG N   + + L
Sbjct:  67 LSTRAAVAPKPGRPRCLILVPTRELAAQVEESVKTYGKYLSLTSMVMFGGVNINPQFKAL 126

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               +ILVATPGRLLDH+ + +      +  LV+DEADR L++GF  ++  +L +LPK R
Sbjct: 127 KARVDILVATPGRLLDHV-AQKTVDLSGVEILVLDEADRMLDMGFIRDIRRVLAVLPKQR 185

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q +LFSAT + ++  LA            ++  +   T E ++Q    VP   +  LL  
Sbjct: 186 QNLLFSATFSDEIRTLANGLLNNPK---SVEVARRNTTAEVVEQSMHRVPQAHKRDLLAH 242

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            +K +  ++++VF  + +G    AE LN   +    +HG + QS RT     F       
Sbjct: 243 LIKHHDWQQVLVFTRTKHGANKLAEKLNKDGITAAAIHGNKSQSARTKALASFKDGSVRA 302

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ TD+AARG+DI  +  +V ++ P+ P++Y+HR+GRT R     G A+  +   E+G+L
Sbjct: 303 LVATDIAARGIDIDQLPQVVNFELPNVPEDYVHRIGRTGRA-GATGSALSLVDDEEMGYL 361

Query: 570 QHL 572
           + +
Sbjct: 362 RDI 364

ref|XP_576400.1| PREDICTED: similar to RCK [Rattus norvegicus]
(483 aa)

Score: 202 bits (514), Expect: 3.09869e-50
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430

ref|NP_031867.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Mus musculus]
gb|AAH21452.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Mus musculus]
dbj|BAA09088.1| RCK [Mus musculus]
sp|P54823|DDX6_MOUSE Probable ATP-dependent RNA helicase p54 (Oncogene RCK homolog) (DEAD-box protein 6)
(483 aa)

Score: 202 bits (514), Expect: 3.09869e-50
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430

ref|NP_252639.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
gb|AAG07337.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
pir||F83151 probable ATP-dependent RNA helicase PA3950 [imported] - Pseudomonas aeruginosa (strain PAO1)
(449 aa)

Score: 202 bits (514), Expect: 3.31259e-50
Length: 359, Idn/Pos/Gap = 131/196/6 (36%/54%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F SL L +P L+ +E +G    T IQA+AIP AL GRD+LA+A+TG+GKT  F +P+++ 
Sbjct:   3 FASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQR  62

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L  +   +  N   A+++ PTRELA Q+   + D   H     A+  GG +   +  KL 
Sbjct:  63 LTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMKLR 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +ILVATPGRLLD L       F  L+ LV+DEADR L++GF  E+ E+   LP+ RQ
Sbjct: 123 KGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT +  +  LA+    + PL + +      A  + ++Q    V  +++  L    
Sbjct: 182 TLLFSATFSDAIRTLAR-ELLRDPLSIEVSPRNTAA--KSVRQWLVPVDKKRKAELFCHL 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L+ N+ ++ +VF  +   V+    LL    +    +HG + Q  R      F   E   L
Sbjct: 239 LQANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLL 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           + TDVAARGLDI  +  +V +D P   ++Y+HR+GRT R     G+A+  +   EV  L
Sbjct: 299 VATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRA-GASGQAVSLVCADEVELL 356

ref|ZP_00219728.1| COG0513: Superfamily II DNA and RNA helicases [Burkholderia cepacia R1808]
(486 aa)

Score: 202 bits (514), Expect: 3.34034e-50
Length: 385, Idn/Pos/Gap = 132/209/12 (34%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+SL L+EP ++ + E+G+   T IQ +AIP  L G D+LA A+TG+GKT  F +PI++ 
Sbjct:   3 FESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPILQR  62

Query: 272 L---YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEK 328
           L   Y      +    A+I+ PTRELA Q+   +   + +      ++ GG +   + + 
Sbjct:  63 LHTFYTEHRGAKRAVRALILTPTRELAAQVEESVRAYSKYVKLRSTVMFGGVSINPQIDA 122

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L  G +I+VATPGRLLDH+Q  +      L  LV+DEADR L++GF  ++  +L  LP  
Sbjct: 123 LKRGVDIVVATPGRLLDHMQQ-KTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPPR 181

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +LFSAT + +++ LA        L   I+  +   T E + Q    V  +++  LL 
Sbjct: 182 RQNLLFSATFSDEIKALADSLLDSPAL---IEVARRNTTAETVAQKIHPVDRDRKRELLT 238

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
             ++ +   +++VF  + +G    AE L    +  + +HG + QS RT    EF      
Sbjct: 239 HLIREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNNTLQ 298

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L+ TD+AARG+DI  +  +V +D P+ P++Y+HR+GRT R     G A+  +   E   
Sbjct: 299 VLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRA-GATGEAVSLVCVDEK-- 355

Query: 569 LQHLRDAKVPLNEYEFPKEKLADIQ 593
            Q LRD +  L + E P+E +A  +
Sbjct: 356 -QLLRDIE-RLIKREIPQEVIAGFE 378

gb|AAD55444.1| BcDNA.GM05306 [Drosophila melanogaster]
(641 aa)

Score: 202 bits (513), Expect: 3.45371e-50
Length: 349, Idn/Pos/Gap = 129/192/10 (36%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  + LS P +R I  +G+   T IQA  IP+AL GRDI   A TG+GKT A+++P +E 
Sbjct: 159 FYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLER 218

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L       +  T  +++ PTREL  Q++ V   L         + +GG + + +   L  
Sbjct: 219 LLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQ 278

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I++ATPGRL+DH+++T  F  + +  L++DEADR L+  F E+M EI+    KTRQT
Sbjct: 279 NPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQT 338

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ---RFRLLF 448
           MLFSAT + +V+DLA VS   KP+ + ++  Q VA    L+Q F  +  ++   R  +L 
Sbjct: 339 MLFSATMSEQVKDLAAVSL-DKPIKVFVNNNQQVAF--NLRQEFIRIREDKEGDREPILA 395

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           + + R      +VF+ +         LL  + V   +LHG   Q +R  +  +F   +  
Sbjct: 396 SLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQID 455

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
            L+ TDVAARGLDI  V  ++ +  P   + YIHRVGRTAR     GRA
Sbjct: 456 VLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARA----GRA 500

ref|ZP_00137387.2| COG0513: Superfamily II DNA and RNA helicases [Pseudomonas aeruginosa UCBPP-PA14]
(449 aa)

Score: 202 bits (513), Expect: 3.60084e-50
Length: 359, Idn/Pos/Gap = 131/196/6 (36%/54%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F SL L +P L+ +E +G    T IQA+AIP AL GRD+LA+A+TG+GKT  F +P+++ 
Sbjct:   3 FASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQR  62

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L  +   +  N   A+++ PTRELA Q+   + D   H     A+  GG +   +  KL 
Sbjct:  63 LTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMKLR 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +ILVATPGRLLD L       F  L+ LV+DEADR L++GF  E+ E+   LP+ RQ
Sbjct: 123 KGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT +  +  LA+    + PL + +      A  + ++Q    V  +++  L    
Sbjct: 182 TLLFSATFSDAIRTLAR-ELLRDPLSIEVSPRNTAA--KSVRQWLVPVDKKRKAELFCHL 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L+ N+ ++ +VF  +   V+    LL    +    +HG + Q  R      F   E   L
Sbjct: 239 LQANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLL 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           + TDVAARGLDI  +  +V +D P   ++Y+HR+GRT R     G+A+  +   EV  L
Sbjct: 299 VATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRA-GASGQAVSLVCADEVELL 356

emb|CAD14067.1| PROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN [Ralstonia solanacearum]
ref|NP_518660.1| PROBABLE ATP-DEPENDENT RNA HELICASE PROTEIN [Ralstonia solanacearum GMI1000]
(540 aa)

Score: 202 bits (513), Expect: 3.63101e-50
Length: 389, Idn/Pos/Gap = 137/206/16 (35%/52%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  +R + E+G+A  T IQ +AIP  L G D+LA A+TG+GKT  F +P++  
Sbjct:   3 FSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLLHR  62

Query: 272 LYKAK----WMP---RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRT 324
           L   +      P   R    A+++ PTRELA Q+   +     +      ++ GG     
Sbjct:  63 LSAVQPNKVQTPHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGINP 122

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           + + L  G +I+VATPGRLLDH+   R     H+  LV+DEADR L++GF  ++ +IL I
Sbjct: 123 QIDALKRGVDIVVATPGRLLDHV-GQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILNI 181

Query: 385 LPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRF 444
           LP  RQ +LFSAT +  +  LA     Q  L   I+  +   T E ++Q    V  E++ 
Sbjct: 182 LPPKRQNLLFSATFSDDIRALADRLLDQPAL---IEVARRNTTAETVEQRIYPVDRERKR 238

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            LL   +  N   +++VF  + +G    AE L    +P L +HG + QS RT    EF  
Sbjct: 239 ELLAKLVSDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFKA 298

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
                L+ TD+AARG+DI  +  +V +D P+ P++Y+HR+GRT R    +G AI  +   
Sbjct: 299 GTLRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRA-GAQGEAISLVCVD 357

Query: 565 EVGFLQHLRDAKVPLNEYEFPKEKLADIQ 593
           E G L+ +      L + E P+  LA  +
Sbjct: 358 EHGLLRDIER----LIKRELPRTVLAGFE 382

ref|NP_851841.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Mus musculus]
dbj|BAC35670.1| unnamed protein product [Mus musculus]
(483 aa)

Score: 202 bits (513), Expect: 3.98004e-50
Length: 344, Idn/Pos/Gap = 118/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H+R +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVRMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ + +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTEYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVMNFDFPKLAETYLHRIGRSGRFGH 430

sp|P26196|DDX6_HUMAN Probable ATP-dependent RNA helicase p54 (Oncogene RCK) (DEAD-box protein 6)
(483 aa)

Score: 202 bits (513), Expect: 4.14959e-50
Length: 344, Idn/Pos/Gap = 117/194/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  +KP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLEKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGH 430

ref|NP_360657.1| ATP-dependent RNA helicase RhlE [Rickettsia conorii str. Malish 7]
gb|AAL03558.1| ATP-dependent RNA helicase RhlE [Rickettsia conorii str. Malish 7]
pir||D97827 ATP-dependent RNA helicase RhlE [imported] - Rickettsia conorii (strain Malish 7)
(414 aa)

Score: 202 bits (513), Expect: 4.14959e-50
Length: 351, Idn/Pos/Gap = 120/198/14 (34%/56%/3%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           LSE  +  +E M     TEIQ ++IP+A++G DILAS++TGSGKTLA+L+P+++   K  
Sbjct:  10 LSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFIK--  67

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
               N T A+I+ PTRELA QI   L+ + + +    A+++GG     +  +L     ++
Sbjct:  68 ----NKTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVI 123

Query: 337 VATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           + TPGR++DHL   RG +  + +   V+DE DR L++G +E++ EI + LP+ RQ ++FS
Sbjct: 124 IGTPGRIIDHLN--RGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFS 181

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           AT    +  +++  +   P+ + + A    A    ++Q    V  +++F  L   L  N+
Sbjct: 182 ATMPKHIIAVSQ-KYLNNPVRITVGATNKAAA--EIKQESMHVSDKEKFSALTKQLG-NR 237

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
              +I+F+ +       A++L Y +     +HG   Q +R      F +  H  ++ TDV
Sbjct: 238 EGSVIIFVKTKRSADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDV 297

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
           AARGLDIP    ++ YD P  P++Y+HR+GRT R     G A+ F+ P +V
Sbjct: 298 AARGLDIPHTQHVINYDLPMCPEDYLHRIGRTGRA-GATGHALSFISPDDV 347

ref|NP_177830.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
(513 aa)

Score: 202 bits (513), Expect: 4.21942e-50
Length: 364, Idn/Pos/Gap = 123/204/10 (33%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+SL L       I++ G+   T IQ + +PL LSG D++A ARTGSGKT AFLIP++E 
Sbjct:  30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK  89

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L   + +P+ G  A+I++PTR+LA Q      +L        ++++GG +   + E+L  
Sbjct:  90 L--KQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTK 147

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++++ATPGRL+  L          + ++V DEAD    +GF E++H+IL  L + RQT
Sbjct: 148 GPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQT 207

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT  + + + AK   ++ P  + +D E  ++    L+  F  V  E+++  L   +
Sbjct: 208 LLFSATLPSALAEFAKAGLRE-PQLVRLDVENKISP--DLKLSFLTVRPEEKYSALLYLV 264

Query: 452 KR--NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           +   +  ++ ++F+S+ + V+F   L    ++     +G   Q  R      F  R+   
Sbjct: 265 REHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTML 324

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGF 568
           L+ TD+AARG+DIP +D ++ +D P  PK ++HRVGR AR   GR G A  F+ P ++ +
Sbjct: 325 LIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARA--GRTGCAYSFVTPEDMPY 382

Query: 569 LQHL 572
           +  L
Sbjct: 383 MLDL 386

ref|NP_951580.1| ATP-dependent RNA helicase RhlB [Geobacter sulfurreducens PCA]
gb|AAR33853.1| ATP-dependent RNA helicase RhlB [Geobacter sulfurreducens PCA]
(443 aa)

Score: 202 bits (513), Expect: 4.36262e-50
Length: 351, Idn/Pos/Gap = 125/197/8 (35%/56%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI-V 269
           +F  L L E  ++G+ + GF+  T IQ + +PL+L G+D+   A+TG+GKT AFLI +  
Sbjct:   2 KFADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFT  61

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           +LL   +   R    AII+APTREL +QI      L +H   T   + GG +   +   L
Sbjct:  62 KLLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNAL 121

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP--K 387
             G +++V TPGRL+D+L+  + +  + +  LVIDEADR  ++GF  ++  ILR LP   
Sbjct: 122 KEGADVVVGTPGRLIDYLKQ-KVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYD 180

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQ ++FSAT   +V +LA   F   P  + +  EQ   T E ++Q    V  +++F LL
Sbjct: 181 KRQNLMFSATLNQRVMELA-YEFMNVPEKVAVTPEQ--MTAERVEQVLYHVGRKEKFPLL 237

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L++   ++ ++F+++    +F  E LN  D P   + G  +Q KR     +F   + 
Sbjct: 238 LGLLRKEGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKL 297

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAI 558
             ++ TDVA+RGL I  V  ++ YD P + ++Y+HR+GRTAR     G+AI
Sbjct: 298 PIMIATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARA-GAEGKAI 347

ref|ZP_00308572.1| COG0513: Superfamily II DNA and RNA helicases [Cytophaga hutchinsonii]
(446 aa)

Score: 202 bits (513), Expect: 4.36262e-50
Length: 381, Idn/Pos/Gap = 128/208/14 (33%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L +P L+ + E G+   T IQ++AIP  L G+D+L  A+TG+GKT AF IPI++L
Sbjct:   3 FQDLKLIDPILKALSEEGYTTPTPIQSQAIPYVLQGKDLLGCAQTGTGKTAAFSIPILQL  62

Query: 272 LYKAKWMPRN-GTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L   K   R     ++I+ PTRELA+QI   L     +   T  ++ GG N+  +   L 
Sbjct:  63 LSVKKSTDRKRPIRSLIVTPTRELAIQIGESLQAYGKYTGLTSTVIFGGVNQSRQVTALQ 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
           NG ++LVATPGRLLD +   +GF+   H+   V+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 NGIDVLVATPGRLLDLMN--QGFISLRHIEIFVLDEADRMLDMGFVHDVRRLLLALPAKR 180

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA-TVEGLQQGFTIVPSEQRFRLLF 448
           Q++ FSAT   ++  LA  +    P  + +    PV+ T + ++Q    V    +  LL 
Sbjct: 181 QSLFFSATMPPEIVKLAD-NILVNPSKVEV---TPVSSTADTIKQFMYFVDRGNKNNLLV 236

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
             L+  + K  +VF  + +      ++L    +    +HG + Q+ R +    F  +   
Sbjct: 237 EVLQDPKIKTCLVFTRTKHVADKVVKMLAEHKIKAEAIHGNKSQNARQNALTNFKAQTTR 296

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L+ TD+AARG+D+  +++++ Y+ P+ P+ Y+HR+GRT R    +G A  F    E  +
Sbjct: 297 ILVATDIAARGIDVDNLEFVINYEIPNIPETYVHRIGRTGRA-GAKGTAFSFCDAEEKAY 355

Query: 569 L---QHLRDAKVP-LNEYEFP 585
           L   + L   K+P ++E+ +P
Sbjct: 356 LKDIEKLISKKIPVIDEHPYP 376

ref|ZP_00184093.1| COG0513: Superfamily II DNA and RNA helicases [Exiguobacterium sp. 255-15]
(481 aa)

Score: 201 bits (512), Expect: 4.51068e-50
Length: 362, Idn/Pos/Gap = 128/199/11 (35%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F    LS P L  IE++G+   T++Q   IP+ALS +DI+  +RTGSGKT +F IP+ EL
Sbjct:   6 FTDFQLSTPILEAIEQLGYHTPTDVQQAVIPVALSEKDIIVKSRTGSGKTASFGIPLCEL  65

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +   +W   N   A+I+ PTRELA+Q+   + ++  +       V G    R +  +L  
Sbjct:  66 V---EW-EENKPQALILTPTRELALQVTEDVMNIGRYKRIKATAVFGKQPFRGQVAELKQ 121

Query: 332 GTNILVATPGRLLDHLQSTRG-FVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            T+I+V TPGR+LDHL+  RG    E +++LV+DEAD  L +GF +++  IL+ LPK R 
Sbjct: 122 KTHIVVGTPGRVLDHLE--RGTLSLEKVKYLVLDEADEMLNMGFLDQVDTILKQLPKQRT 179

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           TMLFSAT    +  L+   + Q P  + I  +     +  ++  +  V  + +F +L   
Sbjct: 180 TMLFSATFPQDIHQLSD-RYMQSPKQVEITTK--ATEIAEIEHSYIKVTDKTKFAVLKDV 236

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
                  + ++F  +   V F A+ L  +D PV  +HG  +Q +R +    F   E   L
Sbjct: 237 TVVENPDRCMIFCRTKEHVDFVAQGLASMDYPVEKIHGGMEQDERLAVMKAFRAGEFRYL 296

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARG+DI  +  ++QYD P E + Y+HR GRT R     G+AI  +  S++  L+
Sbjct: 297 VATDVAARGIDIENITHVIQYDMPVEKESYVHRTGRTGRA-GALGKAISLVTESDMRRLR 355

Query: 571 HL 572
            +
Sbjct: 356 EV 357

gb|EAA26246.1| ATP-dependent RNA helicase RhlE [Rickettsia sibirica 246]
ref|ZP_00142837.1| ATP-dependent RNA helicase RhlE [Rickettsia sibirica 246]
(410 aa)

Score: 201 bits (512), Expect: 4.78198e-50
Length: 351, Idn/Pos/Gap = 120/198/14 (34%/56%/3%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           LSE  +  +E M     TEIQ ++IP+A++G DILAS++TGSGKTLA+L+P+++   K  
Sbjct:   6 LSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFIK--  63

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
               N T A+I+ PTRELA QI   L+ + + +    A+++GG     +  +L     ++
Sbjct:  64 ----NKTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFMQLKKNPKVI 119

Query: 337 VATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           + TPGR++DHL   RG +  + +   V+DE DR L++G +E++ EI + LP+ RQ ++FS
Sbjct: 120 IGTPGRIIDHLN--RGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFS 177

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           AT    +  +++  +   P+ + + A    A    ++Q    V  +++F  L   L  N+
Sbjct: 178 ATMPKHIIAVSQ-KYLNNPVRITVGATNKAAA--EIKQESMHVSDKEKFSALTKQLG-NR 233

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
              +I+F+ +       A++L Y +     +HG   Q +R      F +  H  ++ TDV
Sbjct: 234 EGSVIIFVKTKRSADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDV 293

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
           AARGLDIP    ++ YD P  P++Y+HR+GRT R     G A+ F+ P +V
Sbjct: 294 AARGLDIPHTQHVINYDLPMCPEDYLHRIGRTGRA-GATGHALSFISPDDV 343

ref|YP_132904.1| putative ATP-dependent RNA helicase RhlE [Photobacterium profundum SS9]
emb|CAG23104.1| putative ATP-dependent RNA helicase RhlE [Photobacterium profundum SS9]
(471 aa)

Score: 201 bits (512), Expect: 4.78198e-50
Length: 339, Idn/Pos/Gap = 120/188/4 (35%/55%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS P L  + + G+   + IQA+AIP  + G+D++A+A+TG+GKT AF +P++E 
Sbjct:   9 FASLGLSAPILEAVTKQGYETPSPIQAQAIPAVIEGKDVMAAAQTGTGKTAAFTLPVLER  68

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L     +  N   A+++ PTRELA Q+   +   A +   + A+V GG     +  +L  
Sbjct:  69 LSNGPRVKPNQVRALVLTPTRELAAQVAESVALYAKNLPLSSAVVFGGVKINPQMMRLRQ 128

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++LVATPGRLLD L + R   F+ +  LV+DEADR L++GF  ++ ++L  +PK RQ 
Sbjct: 129 GADVLVATPGRLLD-LYNQRAVRFDQIEVLVLDEADRMLDMGFIRDIRKLLAAMPKQRQN 187

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + ++  LAK      P+ + +      AT   ++Q    V   ++  LL   L
Sbjct: 188 LLFSATFSDEIRQLAK-GLVNNPVEISVTPRN--ATAPTVKQWICPVDKSRKANLLTKLL 244

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K N   +++VF  + +G       L    +    +HG + Q  RT     F   E   L+
Sbjct: 245 KENNWGQVLVFTKTKHGANRLTTHLEGRGIKAAAIHGNKSQGARTKALANFKSNEIQVLV 304

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            TD+AARGLDI  +  +V ++ P   ++Y+HR+GRT R 
Sbjct: 305 ATDIAARGLDIEQLPQVVNFELPHVAEDYVHRIGRTGRA 343

ref|YP_206332.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
gb|AAW87444.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
(434 aa)

Score: 201 bits (512), Expect: 4.82204e-50
Length: 383, Idn/Pos/Gap = 131/206/15 (34%/53%/3%)

Query: 206 LLTPHRF----DSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKT 261
           LL+ HRF     SL L++  L  + E+GF   T IQ +AIPL L G D+LA A+TG+GKT
Sbjct:   9 LLSIHRFIMSFASLGLTKQILTTVAELGFKEATPIQEQAIPLVLQGHDVLAGAQTGTGKT  68

Query: 262 LAFLIPIVELLYKA---KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMG 318
            AF +P+++ L ++   +        ++I+ PTRELA Q+F  L     +      +  G
Sbjct:  69 AAFGLPLIQRLIESPIERHEESKVVRSLILTPTRELAQQVFDSLVSYTQNTELKVVVAYG 128

Query: 319 GANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEM 378
           G +   + E L+ G +IL+ATPGRLLDHL   +        +LV+DEADR L++GF  ++
Sbjct: 129 GTSINVQKENLLGGADILIATPGRLLDHLH-IKTITLNQAEYLVLDEADRMLDMGFIPDI 187

Query: 379 HEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIV 438
            +ILR +P  RQT+ FSAT + KV ++A      KP  + +      +T E ++Q    V
Sbjct: 188 KKILRKMPDERQTLFFSATFSKKVREIAYYMLN-KPKEVQVTPTN--STAETVEQMVYPV 244

Query: 439 PSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTST 498
              ++  LL   +     ++++VF  +  G     + L    +    ++G + Q  R   
Sbjct: 245 DKHRKSELLAYLIGSRNWQQVLVFTKTKQGSDELVKELKKDGIKAASINGDKSQGARLRA 304

Query: 499 FFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAI 558
             EF   +   L+ TDVAARGLDI  ++ ++ Y+ P + ++Y+HR+GRT R  H  G+AI
Sbjct: 305 LEEFKTGKVRALIATDVAARGLDIEQLECVINYELPFKAEDYVHRIGRTGRAGH-TGKAI 363

Query: 559 LFLLPSEVGFL---QHLRDAKVP 578
             +   E   L   + L D ++P
Sbjct: 364 SLMSMDEEYLLKAIETLLDTRLP 386

ref|ZP_00373327.1| ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia endosymbiont of Drosophila ananassae]
ref|ZP_00372550.1| ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia endosymbiont of Drosophila simulans]
gb|EAL59931.1| ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia endosymbiont of Drosophila simulans]
gb|EAL59159.1| ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia endosymbiont of Drosophila ananassae]
(402 aa)

Score: 201 bits (512), Expect: 5.19809e-50
Length: 349, Idn/Pos/Gap = 130/197/13 (37%/56%/3%)

Query: 234 TEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTG-AIIIAPTR 292
           T IQ +AIPLAL G+DIL SA+TG+GKTLAF IP+V     AK +    TG A++I PTR
Sbjct:  20 TPIQIQAIPLALQGKDILGSAQTGTGKTLAFAIPLV-----AKLLNEPNTGSALVIVPTR  74

Query: 293 ELAMQIFGVLHDLASHHHQTR-AIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTR 351
           ELA Q+   +  L S +   R A+++GG     +  +L     I++ TPGR++DH++  +
Sbjct:  75 ELAHQVTNEIRKLLSQNSALRVALLIGGEPIFRQLNQLQKKPQIVIGTPGRIIDHIER-K 133

Query: 352 GFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQ 411
             +  ++  LV+DE DR  ++GF  ++ EI++ LPK RQT++FSAT    +  LA+  + 
Sbjct: 134 TLITRNVSVLVLDETDRMFDMGFGVQIEEIMKHLPKIRQTLMFSATLPGDIVKLAE-KYL 192

Query: 412 QKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKF 471
            +P  + +D E  V T   ++Q        +++  L T L + +   II+F+ +  G   
Sbjct: 193 NRPERISVDCE--VTTSVKIKQEIVYASESEKYEKLVTQLCQRE-GSIIIFVKTKRGADQ 249

Query: 472 YAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQY 531
            A  L+  D   L +HG  +Q KR      F R  +  ++ TDVA+RGLDIP +  ++ Y
Sbjct: 250 LAHRLHKDDYSALAIHGDLRQHKRERVINSFRRGRNQIMVATDVASRGLDIPHIQHVINY 309

Query: 532 DPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLN 580
           D P    +YIHR+GRTAR     G A+ F+ P +   L  L D +  LN
Sbjct: 310 DAPQSQADYIHRIGRTARA-GAEGYALSFVTPQDKRRLPVLADKEGELN 357

ref|NP_794415.1| ATP-dependent RNA helicase rhlE, putative [Pseudomonas syringae pv. tomato str. DC3000]
gb|AAO58110.1| ATP-dependent RNA helicase rhlE, putative [Pseudomonas syringae pv. tomato str. DC3000]
(442 aa)

Score: 201 bits (512), Expect: 5.28556e-50
Length: 359, Idn/Pos/Gap = 129/198/6 (35%/55%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F SL L EP LR +E +G+   T +Q +AIP  L+GRD++A+A+TG+GKT  F +P+++ 
Sbjct:   3 FASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLLQR  62

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L  +   +  N   A+++APTRELA Q+   +   A H   +     GG +   +  KL 
Sbjct:  63 LTMEGPKVAPNSIRALVLAPTRELADQVHESIRQYAEHLPLSTYAAYGGVSINPQMMKLR 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++LVATPGRLLD L   +   F  L+ L++DEADR L++GF EE+  I  +LPK RQ
Sbjct: 123 KGVDVLVATPGRLLD-LYRQKAIRFSQLQTLILDEADRMLDLGFAEELRGIYAVLPKQRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT + ++  LA       PL + +      A+   ++Q    V  +++  L    
Sbjct: 182 TLLFSATFSDEIRLLA-AQMLNDPLTIEVSPRNVAAS--SVKQWVVTVDKKRKADLFIHL 238

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +K+++  +++VF  +  GV    + L  + +    +HG + Q+ R      F   +   L
Sbjct: 239 MKKHRWGQVLVFAKTRVGVDQLVDRLQGLGLNADGIHGDKPQATRQRALDRFKSNDVKIL 298

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           + TDVAARGLDI  +  +V  D P   ++YIHR+GRT R     G AI  +   EV  L
Sbjct: 299 VATDVAARGLDIDDLPTVVNLDLPIVAEDYIHRIGRTGRAGQ-TGEAISLVCADEVELL 356

ref|NP_706675.1| putative ATP-dependent RNA helicase [Shigella flexneri 2a str. 301]
gb|AAN42382.1| putative ATP-dependent RNA helicase [Shigella flexneri 2a str. 301]
ref|NP_836453.1| putative ATP-dependent RNA helicase [Shigella flexneri 2a str. 2457T]
gb|AAP16259.1| putative ATP-dependent RNA helicase [Shigella flexneri 2a str. 2457T]
(406 aa)

Score: 201 bits (512), Expect: 5.28556e-50
Length: 343, Idn/Pos/Gap = 125/193/10 (36%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL LS   LR + E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 LY--KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L   +     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLH--LGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
           Q +LFSAT +  ++ LA     +K LH  L I+  +     + + Q    V  +++  LL
Sbjct: 182 QNLLFSATFSDDIKALA-----EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              + +   ++++VF  + +G    AE LN   +  + +HG + Q  RT    +F   + 
Sbjct: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSVAIHGNKSQGARTRALADFKSGDI 296

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

gb|AAO07196.1| Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
ref|NP_762206.1| Superfamily II DNA and RNA helicase [Vibrio vulnificus CMCP6]
ref|NP_936787.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
dbj|BAC96757.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
(418 aa)

Score: 201 bits (512), Expect: 5.46494e-50
Length: 384, Idn/Pos/Gap = 135/215/20 (35%/55%/5%)

Query: 225 IEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYK------AKWM 278
           + ++GF   T IQ +AIP  L GRD+LA+A+TG+GKT A+ +P++++L +      A   
Sbjct:  18 LSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKH  77

Query: 279 PRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVA 338
           PR    A+I+APTRELA Q+F  L   A H       V GG + R + E+L  G +IL+A
Sbjct:  78 PR----ALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIA 133

Query: 339 TPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQ 398
           TPGRLLDHL  T+      L+ LV+DEADR L++GF  ++  I++ +P+ RQT+LFSAT 
Sbjct: 134 TPGRLLDHL-FTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEERQTLLFSATF 192

Query: 399 TTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKK 458
            T+V+ LA     ++P+ + + A    +T + ++Q    V  +++  LL   +     ++
Sbjct: 193 ETRVKALA-YRLMKEPVEVQVAAAN--STADTVKQMVYPVDKKRKSELLAYLIGSRNWQQ 249

Query: 459 IIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAAR 518
           ++VF  +  G       L    +    ++G + Q  R     +F   +   L+ TDVAAR
Sbjct: 250 VLVFTKTKQGSDALVSELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIATDVAAR 309

Query: 519 GLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVP 578
           GLDI  ++ +V +D P + ++Y+HR+GRT R     G A+ F+   E   LQ + +    
Sbjct: 310 GLDIAQLEQVVNFDMPYKAEDYVHRIGRTGRAGQ-TGLAVSFMSRDEEYLLQAIEN---- 364

Query: 579 LNEYEFPKEKLADIQ-TQLEKLVE 601
           L +   P+E LA  + ++ E  VE
Sbjct: 365 LLDTRLPQEWLAGFEPSEKENYVE 388

gb|AAQ58677.1| ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
ref|NP_900673.1| ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
(441 aa)

Score: 201 bits (512), Expect: 5.46494e-50
Length: 359, Idn/Pos/Gap = 135/207/11 (37%/57%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   LR I+E G+++ T IQ +AIPL LSGRD+LA+A+TG+GKT AF++PI+E 
Sbjct:   3 FSELGLSPEILRAIDEQGYSQPTPIQEKAIPLVLSGRDLLAAAQTGTGKTAAFMLPILER  62

Query: 272 LYK----AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRA-IVMGGANRRTEA 326
           L K    +     +   A++++PTRELA QI GV     + +   RA  V GG N   + 
Sbjct:  63 LKKFANTSVSPAMHPIRALVLSPTRELADQI-GVNVQTYTKYLPLRATTVFGGVNMDPQT 121

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           ++L  G  IL+ATPGRLLDH+Q  +      +  LV+DE DR L++GF +++ +I+ +LP
Sbjct: 122 QELRRGVEILIATPGRLLDHIQQ-KTVQLNKVEVLVLDEGDRMLDMGFIQDIRKIMGMLP 180

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K RQT+LFSAT   +++ LA   F   P    ++  +  AT + ++Q    V + ++ +L
Sbjct: 181 KERQTLLFSATFAPEIKRLA-ADFMHAP--QTVEVARQNATNDQVEQLVFQVDNFKKRQL 237

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   ++  +  ++IVF  +       A  L    +    +HG + Q  R  T   F   +
Sbjct: 238 LAHLIRSREMSQVIVFCKTKISADQLARDLKRDGLDAEAIHGDKTQGARLETLAGFKEGK 297

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
              L+ TDVAARGLDI  + ++V ++ P  P++Y+HR+GRT R    +G AI  + P E
Sbjct: 298 LRVLVATDVAARGLDISELPYVVNFELPTSPEDYVHRIGRTGRA-GAKGIAISLMCPDE 355

ref|NP_717003.1| ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
gb|AAN54448.1| ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
(433 aa)

Score: 201 bits (512), Expect: 5.51073e-50
Length: 343, Idn/Pos/Gap = 122/201/9 (35%/58%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF+S       LR I + G+ +MT IQ +AIP    G+D+LASA+TG+GKT AF +PI++
Sbjct:   2 RFESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQ  61

Query: 271 -LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
            ++       ++ T  +I+ PTRELA Q+   +   + + + +   + GG    T+A+KL
Sbjct:  62 KMVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKL 121

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G +I+VATPGRLL+HL +        + FLV+DEADR L++GF  ++ +IL+ + K R
Sbjct: 122 KRGADIIVATPGRLLEHLTACN-LSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKR 180

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR--LL 447
           Q +LFSAT ++ V+ LA     +  +   I A++   T + + Q   + P EQR +  LL
Sbjct: 181 QNLLFSATFSSAVKKLANEMMIKPQV---ISADKQNTTADTVSQ--VVYPVEQRRKRELL 235

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              + +   ++++VF ++ +      + LN   +P   +HG++ Q  R     EF   + 
Sbjct: 236 SELIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKV 295

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             L+ T+VAARGLDIP+++++V +D P   ++Y+HR+GRT R 
Sbjct: 296 RVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRA 338

emb|CAA98734.1| DHH1 [Saccharomyces cerevisiae]
emb|CAA91586.1| putative RNA helicase [Saccharomyces cerevisiae]
emb|CAA46853.1| RNA-helicase of the DEAD-BOX family [Saccharomyces cerevisiae]
sp|P39517|DHH1_YEAST Putative ATP-dependent RNA helicase DHH1
ref|NP_010121.1| Cytoplasmic DExD/H-box helicase, stimulates mRNA decapping, coordinates distinct steps in mRNA function and decay, interacts with both the decapping and deadenylase complexes, may have a role in mRNA export and translation [Saccharomyces cerevisiae]
(506 aa)

Score: 201 bits (512), Expect: 5.65042e-50
Length: 342, Idn/Pos/Gap = 123/186/11 (35%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+   L    L GI E GF + + IQ  AIP+A++GRDILA A+ G+GKT AF+IP +E 
Sbjct:  48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE- 106

Query: 272 LYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
               K  P+ N   A+I+ PTRELA+Q   V+  L  H   +  +  GG N R +  +L 
Sbjct: 107 ----KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLN 162

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              +ILV TPGR+LD L S +          ++DEAD+ L   F+  + +IL  LP T Q
Sbjct: 163 ETVHILVGTPGRVLD-LASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQ 221

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           ++LFSAT    V++   V    KP  + +  E    T++G+ Q +  V   Q+   L T 
Sbjct: 222 SLLFSATFPLTVKEFM-VKHLHKPYEINLMEE---LTLKGITQYYAFVEERQKLHCLNTL 277

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
             + Q  + I+F +S N V+  A+ +  +       H + KQ +R   F EF + +  TL
Sbjct: 278 FSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTL 337

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
           +C+D+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 338 VCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 379

ref|YP_155880.1| ATP-dependent RNA helicase [Idiomarina loihiensis L2TR]
gb|AAV82331.1| ATP-dependent RNA helicase [Idiomarina loihiensis L2TR]
(372 aa)

Score: 201 bits (512), Expect: 5.79364e-50
Length: 363, Idn/Pos/Gap = 130/197/5 (35%/54%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS  TL  +   G++  T IQA AIPL L+G+D++A+A+TG+GKT AF  P++EL
Sbjct:   3 FSDLALSPETLTALSRQGYSESTPIQAEAIPLVLAGKDVMAAAQTGTGKTTAFTAPLLEL  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L   +    N    +I+ PTRELA Q+   + +L++      A+  GG     +  KL  
Sbjct:  63 LKSNERAKANTARVLILTPTRELAAQVGENVANLSAGLPLNYAVAFGGVKINPQMMKLRK 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G +ILVATPGRLLD L       F  L  LV+DEADR L++GF  ++  I+++LP  RQT
Sbjct: 123 GVDILVATPGRLLD-LYKQNAVRFPKLEVLVLDEADRMLDMGFIHDIKNIIKLLPAKRQT 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT +  +  LAK    + P+ + +    P AT E ++Q    V   Q+  LL   L
Sbjct: 182 LLFSATFSDDIRALAK-GLLKSPVEISV--ALPNATAEPIEQTLYEVQKSQKLGLLLKLL 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K     +++VF  +  G     + L+        +H  + Q  RT    +F   +   L+
Sbjct: 239 KSLDLPQVLVFSRTKQGANRLVKQLDKAGFSAAAIHSAKSQGARTKALADFKSAKVQMLI 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TD+A+RG+DI  + +++ YD P   ++YIHR+GRT R     G AI  +   +V  L+ 
Sbjct: 299 ATDIASRGIDIEKLPYVINYDLPHVAEDYIHRIGRTGRAGQ-TGHAISLVTDEDVAALKA 357

Query: 572 LRD 574
           + +
Sbjct: 358 IEE 360

gb|AAB94769.1| putative RNA helicase RCK [Mus musculus]
(453 aa)

Score: 201 bits (511), Expect: 6.35055e-50
Length: 344, Idn/Pos/Gap = 118/193/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  71 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 130

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGG-ANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   G  N R +  +
Sbjct: 131 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGPTNLRDDIMR 186

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 187 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 245

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 246 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 301

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 302 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFENGLCR 361

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HRVGR+ R  H
Sbjct: 362 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRVGRSGRFGH 405

ref|NP_393777.1| probable DEAD box protein [Thermoplasma acidophilum DSM 1728]
emb|CAC11442.1| probable DEAD box protein [Thermoplasma acidophilum]
(388 aa)

Score: 201 bits (511), Expect: 7.50385e-50
Length: 351, Idn/Pos/Gap = 121/200/13 (34%/56%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F+   + E     ++ MGF  MT +Q R I  AL+GRD++  ++TGSGKT A+L+PI+ 
Sbjct:  23 KFEECNIKEDLKSDLKRMGFVDMTAVQERTIEPALAGRDLIIRSKTGSGKTAAYLVPIIN  82

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            +   +        A+I+ PTRELA+Q+ GV   L         ++ GGA+   + E L 
Sbjct:  83 NISLGR-----KPSALIVLPTRELALQVHGVAEKLGHSSRIRSTVIYGGASMSRQIELLD 137

Query: 331 NGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
            GT+I+V TPGR+LD  +  RGF+    +++ V+DEAD  L++GF +++  ++ +L + +
Sbjct: 138 RGTDIIVGTPGRILDLHE--RGFLNLSAVKYFVLDEADVMLDMGFIDDIKRMMSLLREDK 195

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QT + SAT   ++ D+A   F + P  + + +++   TV+ +   + I    ++  +L T
Sbjct: 196 QTFILSATMPEEIIDMAN-DFMRDPETIIVGSDE--VTVKEIYHYYAISKRNRKLHVLQT 252

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           +LK    +K I+F  +  G K   + L  +    + ++G   QS+R    + F  R    
Sbjct: 253 YLKTYGPQKTIIFSRTKVGTKMVCDFLLNMGYNAVMINGDMSQSQRERAMYLFRNRAD-Y 311

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAIL 559
           L+ T+VAARG+DI  V  I+ +D PD+PK Y+HRVGRTAR G  GR  +I+
Sbjct: 312 LVATNVAARGIDIRDVTDIINFDLPDDPKVYVHRVGRTARLGSEGRAFSIV 362

ref|ZP_00340642.1| COG0513: Superfamily II DNA and RNA helicases [Rickettsia akari str. Hartford]
(410 aa)

Score: 201 bits (510), Expect: 7.82353e-50
Length: 351, Idn/Pos/Gap = 119/197/14 (33%/56%/3%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           LSE  +  +E M     TEIQ ++IP+A++G DILAS++TGSGKTLA+L+P+++   K  
Sbjct:   6 LSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFIK--  63

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
               N T A+I+ PTRELA QI   L+ + + +    A+++GG     +  +L      +
Sbjct:  64 ----NKTTALILVPTRELATQIHSTLNKVTTSYKMNSAVLIGGEPMHKQFMQLKKNPKAI 119

Query: 337 VATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           + TPGR++DHL   RG +  + +   V+DE DR L++G +E++ EI + LP+ RQ ++FS
Sbjct: 120 IGTPGRIIDHLN--RGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFS 177

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           AT    +  +++  +   P+ + + A    A    ++Q    V  +++F  L   L  N+
Sbjct: 178 ATMPKHIIVVSQ-KYLNNPVRITVGAANKAAA--EIKQESIHVSDKEKFSELTKQLG-NR 233

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
              +I+F+ +       A++L Y +     +HG   Q +R      F +  H  ++ TDV
Sbjct: 234 EGSVIIFVKTKRSADQLAKMLKYENHKAEAIHGDLSQRQRERVILSFRKSNHRIMVATDV 293

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
           AARGLDIP    ++ YD P  P++Y+HR+GRT R     G A+ F+ P ++
Sbjct: 294 AARGLDIPHTQHVINYDLPMCPEDYLHRIGRTGRA-GATGHALSFISPDDI 343

ref|ZP_00173901.2| COG0513: Superfamily II DNA and RNA helicases [Methylobacillus flagellatus KT]
(515 aa)

Score: 201 bits (510), Expect: 7.95518e-50
Length: 345, Idn/Pos/Gap = 121/193/5 (35%/55%/1%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           L+  +F  L L+EP LR I + G+   T IQA+AIPL L+G D+LA A+TG+GKT  F +
Sbjct:   9 LSNLQFSDLGLAEPILRAIADTGYTHPTPIQAQAIPLVLNGGDLLAGAQTGTGKTAGFTL  68

Query: 267 PIVELLYKAKWMPRNGTG-AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTE 325
           P++ LL+      + G    +I+ PTRELA Q+   +     H   T  ++ GG     +
Sbjct:  69 PVLHLLHAKPVKVKPGQPRCLILTPTRELAAQVEESVQTYGKHLKLTSMVMFGGVGINPQ 128

Query: 326 AEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
            E+L    +ILVATPGRLLDH  + +      +  LV+DEADR L++GF  ++  +L +L
Sbjct: 129 IERLKKPLDILVATPGRLLDH-AAQKTIDLSAIEILVLDEADRMLDMGFIRDIKRVLALL 187

Query: 386 PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR 445
           PK RQ +LFSAT + ++++LA            ++  +     E ++Q   +V    +  
Sbjct: 188 PKKRQNLLFSATFSDEIKELADGLLHNPGF---VEVARRNTASELVEQAVHLVSQGHKRD 244

Query: 446 LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARR 505
           L+   ++ +  K++++F  + +G    AE L+   +    +HG + QS RT    EF   
Sbjct: 245 LVAHLIRHHDWKQVLIFTRTKHGANRLAEKLSKDGIAAAAIHGNKSQSARTKALAEFKNG 304

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
               L+ TD+AARGLDI  +  +V ++ P+ P++Y+HR+GRT R 
Sbjct: 305 TLPVLVATDIAARGLDIDQLPQVVNFELPNVPEDYVHRIGRTGRA 349

ref|NP_782118.1| ATP-dependent RNA helicase [Clostridium tetani E88]
gb|AAO36055.1| ATP-dependent RNA helicase [Clostridium tetani E88]
(481 aa)

Score: 201 bits (510), Expect: 9.09134e-50
Length: 365, Idn/Pos/Gap = 120/198/13 (32%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F S  +SE  L  + ++G+   +++Q + IP+A+  +DI+  ++TGSGKT +F IPI E 
Sbjct:   6 FKSFGISEDILEALLKLGYKNPSKVQQKVIPVAIKNKDIIVKSKTGSGKTASFGIPICEN  65

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +   +  P+    A+++ PTREL +Q+   + ++        + + G    +T+A +L  
Sbjct:  66 VNLEERKPQ----ALVLTPTRELCIQVKEDIKNIGRFKRIKCSAIFGKQPFKTQALELKQ 121

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            T+++V TPGR LDH++  RG +  + +++ ++DE D    +GF +++  I+R LPK R 
Sbjct: 122 RTHVVVGTPGRTLDHIE--RGTIDLDKIKYFIVDEGDEMFNMGFIDQVESIMRKLPKKRV 179

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
            MLFSAT   K+E L +  + + P+ + ++ E+   T E +Q  +  +  + +F LL   
Sbjct: 180 NMLFSATIPEKIEKLCE-KYMKSPIMIEVNPEE--FTEEKIQHIYYEIEDKNKFDLLNKI 236

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L        I+F  +   V   A+L+   D P   LHG   Q KR      F R E   L
Sbjct: 237 LITENPDSSIIFCRTQENVNKLAKLMENKDYPCKALHGGMMQDKRIDIMNRFKRGEFMFL 296

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFL 569
           + TD+AARG+D+  V  I+ YD P E + Y+HR GRT R   GR G AI  + P E  F 
Sbjct: 297 VATDLAARGIDVENVTHIINYDIPMEKENYVHRTGRTGRA--GREGCAISLVTPYEDRFF 354

Query: 570 QHLRD 574
           + + +
Sbjct: 355 KQIEE 359

gb|AAF95975.1| ATP-dependent RNA helicase, DEAD box family [Vibrio cholerae O1 biovar eltor str. N16961]
ref|NP_232462.1| ATP-dependent RNA helicase, DEAD box family [Vibrio cholerae O1 biovar eltor str. N16961]
pir||C82506 ATP-dependent RNA helicase, DEAD box family VCA0061 [imported] - Vibrio cholerae (strain N16961 serogroup O1)
(452 aa)

Score: 200 bits (509), Expect: 9.96525e-50
Length: 359, Idn/Pos/Gap = 128/199/10 (35%/55%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L    L+ +    F + TEIQ +AIPL ++GRD+LAS++TGSGKTLAF++P++ 
Sbjct:   6 QFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLH  65

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
              K K         +I+ PTRELA Q++G L  +      T  ++ GG N   + + L 
Sbjct:  66 KSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALA 125

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP-KTR 389
            G   +VATPGRL DHL   R    E L  LV+DEADR L++GF +E+  I      + R
Sbjct: 126 RGPRFIVATPGRLADHLDH-RSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184

Query: 390 QTMLFSAT-QTTKVEDLA-KVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPS-EQRFRL 446
           QT++FSAT     V D+A ++  + K + +G+ +E+     + + Q F +    + +  L
Sbjct: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEH----KDITQHFYLCDHLDHKEAL 240

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L   + +++I+F ++        E LN  ++  + L G   Q++R +   +F R  
Sbjct: 241 LDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAV 300

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
              L+ TDVA+RGLDIPAV  ++ +D P   +EY+HRVGRT R    +G A+  + P +
Sbjct: 301 FKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRA-GNKGDAMSLVGPKD 358

ref|NP_661925.1| ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
gb|AAM72267.1| ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
(414 aa)

Score: 200 bits (509), Expect: 1.02178e-49
Length: 383, Idn/Pos/Gap = 128/207/18 (33%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +L + +   + + E G+   T IQ  AIP+ L G D+LA A+TG+GKT AF +P+++ 
Sbjct:   3 FSALGIIDHLRKALAEEGYNSPTPIQKEAIPVILEGNDLLACAQTGTGKTAAFALPVLQR  62

Query: 272 LYKAKWM-PRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L++++    +     +++ PTRELA+QI         H      ++ GG N+  +  +L+
Sbjct:  63 LHQSRMHGEKRKIRCLVLTPTRELAIQIGESFTAYGRHTGLINTVIFGGVNQNPQTARLV 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLR---FLVIDEADRCLEIGFEEEMHEILRILPK 387
            G +ILVATPGRLLD +    G    HLR   + V+DEADR L++GF  ++  +L +LPK
Sbjct: 123 RGVDILVATPGRLLDLI----GQGHLHLRDIEYFVLDEADRMLDMGFIHDIRRVLAVLPK 178

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA-TVEGLQQGFTIVPSEQRFRL 446
            RQ++ FSAT   ++  L+  +    P  + +    PV+ TVE + Q    V  E +  L
Sbjct: 179 KRQSLFFSATMPPEIIKLS-AAILHNPKEVMV---TPVSSTVEIINQQILFVDRENKNSL 234

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   LK    +  +VF  + +G    A  L + D+    +HG + Q+ R      F  R+
Sbjct: 235 LAHLLKERNIESALVFTRTKHGADKVARFLAHHDITAEAIHGNKSQNARQRALGNFKTRQ 294

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TD+AARG+DI  +++++  D P+ P+ Y+HR+GRT R    RG A  F    E 
Sbjct: 295 TRVLVATDIAARGIDIDELEYVINIDLPNIPETYVHRIGRTGRA-GNRGAAYSFCNAEEK 353

Query: 567 GFLQHLRD---AKVP-LNEYEFP 585
            +L+ +      K+P + ++ FP
Sbjct: 354 AYLRDIEKLIARKIPVIEDHPFP 376

ref|NP_966948.1| ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia endosymbiont of Drosophila melanogaster]
gb|AAS14882.1| ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia endosymbiont of Drosophila melanogaster]
(408 aa)

Score: 200 bits (509), Expect: 1.05646e-49
Length: 349, Idn/Pos/Gap = 129/196/13 (36%/56%/3%)

Query: 234 TEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTG-AIIIAPTR 292
           T IQ +AIPLAL G+DIL SA+TG+GKTLAF IP+V     AK +    TG A++I PTR
Sbjct:  26 TPIQIQAIPLALQGKDILGSAQTGTGKTLAFAIPLV-----AKLLNEPNTGSALVIVPTR  80

Query: 293 ELAMQIFGVLHDLASHHHQTR-AIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTR 351
           ELA Q+   +  L S +   R A+++GG     +  +L     I++ TPGR++DH++  +
Sbjct:  81 ELAHQVTNEIRKLLSQNSALRVALLIGGEPIFRQLNQLQKKPQIVIGTPGRIIDHIER-K 139

Query: 352 GFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQ 411
             +  ++  LV+DE DR  ++GF  ++ EI++ LPK RQT++FSAT    +  LA+  + 
Sbjct: 140 TLITRNVSVLVLDETDRMFDMGFGVQIEEIMKHLPKIRQTLMFSATLPGDIVKLAE-KYL 198

Query: 412 QKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKF 471
            +P  + +D E    T   ++Q        +++  L T L + +   II+F+ +  G   
Sbjct: 199 NRPERISVDCE--ATTSVKIKQEIVYASESEKYEKLVTQLCQRE-GSIIIFVKTKRGADQ 255

Query: 472 YAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQY 531
            A  L+  D   L +HG  +Q KR      F R  +  ++ TDVA+RGLDIP +  ++ Y
Sbjct: 256 LANRLHKDDYSALAIHGDLRQHKRERVINSFRRGRNQIMVATDVASRGLDIPHIQHVINY 315

Query: 532 DPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLN 580
           D P    +YIHR+GRTAR     G A+ F+ P +   L  L D +  LN
Sbjct: 316 DAPQSQADYIHRIGRTARA-GAEGYALSFVTPQDKRRLPALADKEGELN 363

emb|CAB15947.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis str. 168]
ref|NP_391790.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis str. 168]
pir||E69613 ATP-dependent RNA helicase deaD - Bacillus subtilis
sp|P42305|DBPA_BACSU ATP-dependent RNA helicase dbpA
dbj|BAA11693.1| homologous to ATP dependent RNA helicase DeaD of E. coli~hypothetical [Bacillus subtilis]
(479 aa)

Score: 200 bits (509), Expect: 1.05646e-49
Length: 363, Idn/Pos/Gap = 125/191/9 (34%/52%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +  +S   LR +E +G+   T++Q   IP AL  +D++  ++TGSGKT +F IP+ EL
Sbjct:   4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
              A W   N   A+I+ PTRELA+Q+   + ++          V G ++   +  +L  
Sbjct:  64 ---ANW-DENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQ 119

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
            ++I+V TPGR+LDH++       + L +LVIDEAD  L +GF E++  I++ LP  R T
Sbjct: 120 KSHIVVGTPGRVLDHIEKGT-LPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTT 178

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           MLFSAT    +E L++  + Q P H+ + A     T   ++     V  E +F LL   L
Sbjct: 179 MLFSATLPQDIEKLSR-QYMQNPEHIEVKAAG--LTTRNIEHAVIQVREENKFSLLKDVL 235

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                   I+F  +   V    + L+ +  P   +HG   Q  R     EF R E+  L+
Sbjct: 236 MTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLV 295

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TDVAARG+DI  +  ++ YD P E + Y+HR GRT R    +G+AI F+   E  FL  
Sbjct: 296 ATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRA-GNKGKAISFVTAFEKRFLAD 354

Query: 572 LRD 574
           + +
Sbjct: 355 IEE 357

gb|EAA05253.3| ENSANGP00000003952 [Anopheles gambiae str. PEST]
ref|XP_309566.2| ENSANGP00000003952 [Anopheles gambiae str. PEST]
(826 aa)

Score: 200 bits (509), Expect: 1.07424e-49
Length: 343, Idn/Pos/Gap = 130/194/8 (37%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  + LS P ++ I  +G+   T IQA  IP+AL GRDI   A TG+GKT A+++P +E 
Sbjct: 176 FYQMDLSRPLMKAIGALGYIYPTPIQASTIPIALMGRDICGCAATGTGKTAAYMLPTIER 235

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           LLYK   + +  T  +++ PTREL  Q++ V   L    +    I +GG + + +   L 
Sbjct: 236 LLYKPN-VAQAVTRVLVLVPTRELGAQVYQVAKQLTQFTNVDVGIAIGGLDVKAQEAVLR 294

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              ++++ATPGRL+DH+++T  F  + +  L++DEADR L+  F E+M EI+R    TRQ
Sbjct: 295 KNPDVVIATPGRLIDHIKNTPSFSLDSIEILILDEADRMLDEYFAEQMKEIIRSCSATRQ 354

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ---RFRLL 447
           TMLFSAT T +V+DLA VS  +KP+ + ++  Q VA    L+Q F  +   +   R  +L
Sbjct: 355 TMLFSATMTEEVKDLAAVSL-KKPVKIFVNNNQTVAF--NLRQEFIRIREGREADREAIL 411

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              + R      +VF+ +         LL  + V   +LHG   Q++R  +  EF   + 
Sbjct: 412 AALVCRTFHDHCMVFVQTKRTAHRLRILLGLLGVKTGELHGDLTQAQRLESLKEFKDEQV 471

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             L+ TDVAARGLDI  V  ++ +  P   + YIHRVGRTAR 
Sbjct: 472 DILIATDVAARGLDISTVKTVINFVMPATLEHYIHRVGRTARA 514

emb|CAD63140.1| ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
ref|NP_784299.1| ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
(528 aa)

Score: 200 bits (509), Expect: 1.1107e-49
Length: 361, Idn/Pos/Gap = 122/199/11 (33%/55%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L LS+  L+ +   G+   T IQA  IP+ L G+D++  A+TG+GKT AF +PI++
Sbjct:   2 KFTELGLSDSLLKAVNRAGYEEATPIQAETIPMVLEGKDVIGQAQTGTGKTAAFALPILQ  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            L        +   A++++PTRELA+Q    +  L         +V GGA+ R +   L 
Sbjct:  62 RLD----FDNHNIQALVVSPTRELAIQTQEEIFRLGKDERAKVQVVYGGADIRRQIRNLK 117

Query: 331 NGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               ++V TPGRLLDH++  RG V  +H++ LV+DEAD  L +GF E++  I++ +P  R
Sbjct: 118 QNPQVIVGTPGRLLDHIR--RGTVKLDHVKMLVLDEADEMLNMGFLEDIESIIKQVPDER 175

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QTMLFSAT   +++ +  V F ++P H+ I +++   T + + Q +      ++F ++  
Sbjct: 176 QTMLFSATMPPEIKRIG-VQFMKEPHHVKIKSKE--MTADTVDQYYVKAKEFEKFDIMTR 232

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
                  +  IVF  +   V   ++ L         +HG   Q +RT    +F   +   
Sbjct: 233 LFDVQAPELTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLSQQRRTQIMRQFKAGKLDI 292

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ TDVAARGLD+  V  +  YD P +P  Y+HR+GRT R  H +G ++ F+ P+E+ +L
Sbjct: 293 LVATDVAARGLDVSGVTHVYNYDIPQDPDSYVHRIGRTGRAGH-KGVSLTFVTPNEMEYL 351

Query: 570 Q 570
           +
Sbjct: 352 R 352

emb|CAH89402.1| hypothetical protein [Pongo pygmaeus]
(483 aa)

Score: 200 bits (509), Expect: 1.22766e-49
Length: 344, Idn/Pos/Gap = 117/193/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRGDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+G + R  H
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGGSGRFGH 430

gb|AAM28223.1| ATP-dependent RNA helicase [Danio rerio]
ref|NP_775375.1| ATP-dependent RNA helicase homolog [Danio rerio]
(862 aa)

Score: 200 bits (509), Expect: 1.23795e-49
Length: 385, Idn/Pos/Gap = 133/212/14 (34%/55%/3%)

Query: 190 SSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRD 249
           + E    Q + K  SG      F S+ LS P  +GI + G+   T IQ + IP+ L G+D
Sbjct:  63 TRELVRAQNKKKKKSG-----GFQSMGLSYPVYKGIMKKGYKVPTPIQRKTIPVILDGKD 117

Query: 250 ILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHH 309
           ++A ARTGSGKT AFL+P+ E L   +   + G  A+I+ PTRELA+Q      +L    
Sbjct: 118 VVAMARTGSGKTAAFLVPLFEKLKAPQ--AQTGARALILTPTRELALQTMKFTKELGKFT 175

Query: 310 HQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRC 369
               A+++GG +   +   L    +I++ TPGRL+ H+        + + ++V DEADR 
Sbjct: 176 GLRTALILGGDSMDDQFAALHENPDIIIGTPGRLM-HVIQEMNLKLQSVEYVVFDEADRL 234

Query: 370 LEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVE 429
            E+GF E++ EI+R LP  RQT+LFSAT    + + A+    + P+ + +D +  ++  E
Sbjct: 235 FEMGFAEQLQEIIRRLPDARQTLLFSATLPKLIVEFARAGLTE-PVLIRLDVDTKLS--E 291

Query: 430 GLQQGFTIVPSEQRFRLLFTFLKR--NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLH 487
            L+  F  +  + +  LL   L+     +++ +VF+++ + V++  ELL+   V    ++
Sbjct: 292 QLKLSFFSLRLDDKPALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLSAEGVDCSCIY 351

Query: 488 GKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRT 547
               Q+ R  +   F  R+   LL TDVAARG+DIP +D ++ Y+ P +PK ++HRVGR 
Sbjct: 352 SALDQTARKISIGRFVHRKVMLLLVTDVAARGIDIPLLDNVINYNFPCKPKLFLHRVGRV 411

Query: 548 ARGVHGRGRAILFLLPSEVGFLQHL 572
           AR   G G A   + P EV +L  L
Sbjct: 412 ARAGRG-GTAYSLVCPDEVPYLYDL 435

ref|YP_159102.1| ATP-dependent RNA helicase [Azoarcus sp. EbN1]
emb|CAI08201.1| ATP-dependent RNA helicase [Azoarcus sp. EbN1]
(508 aa)

Score: 200 bits (509), Expect: 1.25878e-49
Length: 363, Idn/Pos/Gap = 134/199/10 (36%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L+EP LR I E G+   T IQA+AIPL L+G D+LA+A+TG+GKT  F +P++  
Sbjct:   7 FAGLGLAEPLLRAISESGYTTPTPIQAQAIPLVLAGGDLLAAAQTGTGKTAGFTLPVLHR  66

Query: 272 LYKAKWM-PRNGTG-AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L  A    P+ G    +I+ PTRELA Q+   +     H   T  ++ GG     + + L
Sbjct:  67 LSAAPAANPKAGRPRCLILTPTRELAAQVEESVRTYGKHLPTTSMVMFGGVGINPQIQAL 126

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               +ILVATPGRLLDH+   +      +  L++DEADR L++GF  ++ +IL +LPK R
Sbjct: 127 KKRVDILVATPGRLLDHV-GQKTLDLSGVEILILDEADRMLDMGFIRDIRKILALLPKQR 185

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q +LFSAT + ++  LA            ++  +     E +QQ    V  +Q+  LL  
Sbjct: 186 QNLLFSATFSDEIRSLANGLLHNPGC---VEVARRNTASELVQQSVYSVAQKQKRDLLVH 242

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            +K+N   +++VF  + +G    AE L    +P   +HG + QS RT    EF       
Sbjct: 243 LVKQNDWHQVLVFTRTKHGANKLAEYLAKHGIPSAAIHGNKSQSARTRALAEFKDGSLPV 302

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ TD+AARGLDI  +  +V ++ P+ P++Y+HR+GRT R     G A+ F+   E    
Sbjct: 303 LVATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRA-GSSGAAVSFVDSEE---R 358

Query: 570 QHL 572
           QHL
Sbjct: 359 QHL 361

ref|NP_420654.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter crescentus CB15]
gb|AAK23822.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter crescentus CB15]
pir||B87478 hypothetical protein CC1847 [imported] - Caulobacter crescentus
(517 aa)

Score: 200 bits (509), Expect: 1.26933e-49
Length: 345, Idn/Pos/Gap = 125/193/14 (36%/55%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS  TL+ + + G+   T IQA+AIP+AL+G+D+L  A+TG+GKT AF +P+++ 
Sbjct:   4 FTDLGLSPTTLQAVADTGYTTATPIQAQAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDR  63

Query: 272 LYKAKW---MPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEK 328
           L   +    MPR    A++IAPTRELA Q+       A     + A+++GG +   + +K
Sbjct:  64 LQSGRAKARMPR----ALVIAPTRELADQVAASFEKYAKGTKLSWALLIGGVSFGDQEKK 119

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L  G ++L+ATPGRLLDH +  +  +   ++FLV+DEADR L++GF  ++  I ++ P  
Sbjct: 120 LDRGVDVLIATPGRLLDHFERGK-LLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPK 178

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPS---EQRFR 445
           +QT+ FSAT   ++  L K  F + P+   I+  +P  T   + Q    VPS   + +  
Sbjct: 179 KQTLFFSATMPPEITRLTK-QFLRDPVR--IEVARPATTNANITQLLVKVPSSDPKAKRL 235

Query: 446 LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARR 505
            L   +++   +  IVF +    V   A+ L         +HG   Q++R  T  +F   
Sbjct: 236 ALRALIEKAGIETGIVFCNRKTEVDIVAKSLKVHGYDAAPIHGDLDQTQRMKTLADFRSG 295

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
               L+ +DVAARGLDIPAV  +  YD P    +Y+HR+GRT R 
Sbjct: 296 ALKILVASDVAARGLDIPAVSHVFNYDVPHHADDYVHRIGRTGRA 340

dbj|BAB76417.1| ATP-dependent RNA helicase [Nostoc sp. PCC 7120]
pir||AF2395 ATP-dependent RNA helicase [imported] - Nostoc sp. (strain PCC 7120)
ref|NP_488758.1| ATP-dependent RNA helicase [Nostoc sp. PCC 7120]
(426 aa)

Score: 200 bits (508), Expect: 1.3015e-49
Length: 386, Idn/Pos/Gap = 129/209/15 (33%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +  + E+G+ + T IQ ++IP  LSGRD+LA A+TG+GKT +F +P++ L
Sbjct:   3 FSHLGLSNEIINAVTELGYTKPTPIQMQSIPAVLSGRDLLAGAQTGTGKTASFTLPLLHL  62

Query: 272 L----YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           L     K+     +   A+I+ PTRELA Q+   + D   +      ++ GG +   + +
Sbjct:  63 LSQDSLKSASNASSPIRALILTPTRELAAQVESSVRDYGKYLKLNSMVMFGGVSINPQKQ 122

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
           +L    +ILVATPGRLLDH+Q  +G V    +  LV+DEADR L++GF  ++  IL +LP
Sbjct: 123 RLKGRVDILVATPGRLLDHVQ--QGTVNLSQIEILVLDEADRMLDMGFIRDIRRILSLLP 180

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K RQ +LF AT + K+++LA     +  +   I+  +   T + + Q    +  +++  L
Sbjct: 181 KQRQNLLFFATFSDKIKELAAGLLNRPQM---IEVARRNVTADTVTQKVYKIERDRKRDL 237

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   ++++   +++VF  +  G     + L +  +  L +HG + QS RT    +F    
Sbjct: 238 LAHLIRKDNWYQVLVFTRTKYGADRLVKQLGHERIQALAIHGNKSQSARTHALAKFKNGS 297

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TD+AARGLDI  + ++V +D P  P++Y+HR+GRT R     G A+  +   E 
Sbjct: 298 LQVLVATDIAARGLDISELPYVVNFDLPYVPEDYVHRIGRTGRA-GASGEAVSLVSADEY 356

Query: 567 GFLQHLRDAKVPLNEYEFPKEKLADI 592
             L  +      L E   P E +A I
Sbjct: 357 HLLADIEK----LIEKRLPFELVAGI 378

ref|YP_155933.1| ATP-dependent RNA helicase [Idiomarina loihiensis L2TR]
gb|AAV82384.1| ATP-dependent RNA helicase [Idiomarina loihiensis L2TR]
(416 aa)

Score: 200 bits (508), Expect: 1.36832e-49
Length: 381, Idn/Pos/Gap = 126/215/13 (33%/56%/3%)

Query: 209 PHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI 268
           P  F SL LS+  LR + E G+   T IQ +AIP  ++G D+LA+A+TG+GKT  F +P+
Sbjct:   7 PSSFQSLGLSDDILRAVTECGYTTPTPIQQQAIPTVMAGHDLLAAAQTGTGKTAGFTLPL  66

Query: 269 VELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEK 328
           +  L + K   +    A+I+ PTRELA Q+   L+  A +      ++ GG     +   
Sbjct:  67 LHKLSQTKTDGKPVIKALILTPTRELAAQVEDNLNTYAKYTGLKSLVIFGGVGINPQISA 126

Query: 329 LINGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           L  G +ILVATPGRLLDH  S +G V    +  L++DEADR L++GF  ++ ++++++P+
Sbjct: 127 LRRGVDILVATPGRLLDH--SRQGTVDLSKIDVLILDEADRMLDMGFIHDIKKVMKLIPE 184

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQT+LFSAT +++++ L++   QQ  L   I+  +  A  + ++Q    V  +++  LL
Sbjct: 185 KRQTLLFSATFSSEIKALSQQFMQQPKL---IEVARQNAAADTIEQRVYPVDKKRKRELL 241

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              +     ++++VF  + +G    A  L    +P + +HG + Q  RT    +F   + 
Sbjct: 242 SYLIGSRNWRQVLVFTRTKHGANRLATQLTDDGLPAMAIHGNKSQGARTKALAQFKAGKL 301

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAILFLLPSEV 566
             L+ TD+AARG+DI  +  ++ ++ P   ++Y+HR+GRT R G  G   +++ +   ++
Sbjct: 302 RVLVATDIAARGIDIDELPHVINFELPQVAEDYVHRIGRTGRAGSEGEAASLVCVDEHKL 361

Query: 567 GFLQHLRDAKVPLNEYEFPKE 587
                LRD +  L + E P+E
Sbjct: 362 -----LRDIE-KLTKNEIPRE 376

ref|XP_284494.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Mus musculus]
(853 aa)

Score: 200 bits (508), Expect: 1.59006e-49
Length: 233, Idn/Pos/Gap = 107/158/2 (45%/67%/0%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           RF   PLS+ TL+G++E  +  +TEIQ + I LAL G+D+L +A+TGSGKTLAFL+P++E
Sbjct: 173 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 232

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            LY+ +W   +G G +II+PTRELA Q F VL  +  +H  +  +++GG + + EAE+ I
Sbjct: 233 ALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAER-I 291

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           N  NILV TPGRLL H+  T  F   +L+ LV+DEADR L++GF + M+ I+  LPK RQ
Sbjct: 292 NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQ 351

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQR 443
           T+LFSATQT  V+DLA++S +  P ++ +  +      E  +    ++PSE++
Sbjct: 352 TLLFSATQTKSVKDLARLSLKD-PEYVWVHEKAKYRYKEDGEALLILLPSEEQ 403


Score: 65 bits (158), Expect: 6.11268e-09
Length: 99, Idn/Pos/Gap = 40/57/1 (40%/57%/1%)

Query: 555 GRAILFLLPSE-VGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDG 613
           G A+L LLPSE  G +Q L   KVP+ E +   EKL D+Q +LE  +  +  L++ A+  
Sbjct: 391 GEALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRC 450

Query: 614 FRSYLQAYASHSMKDVFNVHELDIAAVAKSFGFSAPPRI 652
           F SY+++      K+VFNV +L I   A S G +  PRI
Sbjct: 451 FVSYIRSVYLMKDKEVFNVSKLPITEYALSLGLAVAPRI 489

ref|ZP_00317714.1| COG0513: Superfamily II DNA and RNA helicases [Microbulbifer degradans 2-40]
(519 aa)

Score: 200 bits (508), Expect: 1.63036e-49
Length: 366, Idn/Pos/Gap = 127/201/9 (34%/54%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L     + + E G+   T IQA+AIP  L GRD++A+A+TG+GKT  F +PI+E
Sbjct:  22 KFAELGLCPAIQKAVLEQGYETPTPIQAQAIPPVLEGRDVMAAAQTGTGKTAGFTLPILE  81

Query: 271 LLYKA----KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           +L +     + +  N   A+++ PTRELA Q+   +     +      IV GG     + 
Sbjct:  82 ILAEGIENGRKVKPNQARALVLTPTRELAAQVGENVALYGKYLPIKSTIVFGGVKINPQM 141

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            KL  G +ILVATPGRL+D L + R   F+ L  LV+DEADR L++GF  ++ +I+ ILP
Sbjct: 142 MKLRGGVDILVATPGRLMD-LYNQRAVKFDQLEMLVLDEADRMLDMGFIHDIRKIMAILP 200

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K RQ ++FSAT +  + +LAK S    P+ + ++   P +T   ++Q    V  +++  L
Sbjct: 201 KKRQNLMFSATFSQDIRELAK-SIVNNPVEITVNP--PNSTATRVKQWICPVDKKEKPAL 257

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   +K N+ ++++VF  + +G     + L    +    +HG + Q  RT    EF    
Sbjct: 258 LTHLIKTNKWQQVLVFSRTKHGANKLVKQLEGSGLRAAAIHGNKSQGARTKALAEFKNGT 317

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TD+AARGLDI  +  +V +D P   ++Y+HR+GRT R     G A+  +   E 
Sbjct: 318 VKILVATDIAARGLDIDQLPQVVNFDLPQVAEDYVHRIGRTGRA-GAEGNAVSLVSADEF 376

Query: 567 GFLQHL 572
             L+ +
Sbjct: 377 QMLKEI 382

ref|YP_190645.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
gb|AAW59989.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
(431 aa)

Score: 199 bits (507), Expect: 1.83237e-49
Length: 340, Idn/Pos/Gap = 126/180/5 (37%/52%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L+EP  + + E G+   T IQA AIP  L GRD+L  A+TG+GKT AF +PI+  
Sbjct:   4 FAELKLAEPIQKALAEEGYTTPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPILNH  63

Query: 272 LYKAKW-MPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           ++  +   P  G  A+++APTRELA QI       A H   + A+V GG  +  + E   
Sbjct:  64 IFTNRRPAPPKGVRALVLAPTRELASQIGESFAAYARHMKFSYAVVFGGVGQGRQIETTR 123

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++LVA PGRLLD L   +      L  LV+DEADR L++GF  ++  I+ +LPK RQ
Sbjct: 124 RGVDVLVAAPGRLLD-LIGQKHIDLSTLEILVLDEADRMLDMGFVRDIQRIMALLPKQRQ 182

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    + DLA  S  + P  + +  E   +TV+ + Q    V S  +       
Sbjct: 183 TLLFSATMPPSISDLAH-SLLKNPATVQVTPES--STVDRINQAVMFVDSGSKKDAALML 239

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L+     + +VF    +     AE LN   +    +HG + Q  R      F       L
Sbjct: 240 LESPSVARAVVFTLMKHEANKVAEFLNKNGIRAEAIHGNKSQGARERAMAGFRSGAIKAL 299

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           + TD+AARG+D+  V  +  YD P+ P+ Y+HR+GRTAR 
Sbjct: 300 VATDIAARGIDVDEVSHVFNYDLPNVPESYVHRIGRTARA 339

gb|AAS51423.1| ACR197Wp [Ashbya gossypii ATCC 10895]
ref|NP_983599.1| ACR197Wp [Eremothecium gossypii]
(484 aa)

Score: 199 bits (507), Expect: 1.91044e-49
Length: 342, Idn/Pos/Gap = 122/186/11 (35%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+   L    L GI E GF R + IQ  AIP+AL+ RDILA A+ G+GKT AF+IP +E+
Sbjct:  31 FEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLEI  90

Query: 272 LYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           +      P+ N   A+I+ PTRELA+Q   V+  L  H   +  +  GG N R +  +L 
Sbjct:  91 V-----KPKVNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLN 145

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              ++LV TPGR+LD L S +          V+DEAD+ L   F+  + +IL  LP+  Q
Sbjct: 146 EPVHVLVGTPGRVLD-LASRKVADLSECSLFVMDEADKMLSRDFKSLVEQILSFLPQNHQ 204

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           ++LFSAT    V++   V    KP  + +  E    T++G+ Q +  V   Q+   L T 
Sbjct: 205 SLLFSATFPLTVKEFM-VKHLNKPYEINLMDE---LTLKGITQYYAFVEERQKLHCLNTL 260

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
             + Q  + I+F +S N V+  A+ +  +       H + KQ +R   F EF + +  TL
Sbjct: 261 FSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTL 320

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
           +C+D+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 321 VCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 362

ref|YP_107735.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei K96243]
ref|YP_103512.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
emb|CAH35107.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei K96243]
gb|AAU49508.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
(482 aa)

Score: 199 bits (507), Expect: 1.99182e-49
Length: 358, Idn/Pos/Gap = 128/196/9 (35%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FD   L+   L+ I E G+   T IQA+AIP+ LSGRD++ +A+TG+GKT +F +PI++ 
Sbjct:  13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR  72

Query: 272 LY----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           L      +    R+   A+I+ PTRELA Q+   +H  A H     A+V GG +   +  
Sbjct:  73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 132

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           +L  G  IL+ATPGRLLDH+Q     + + ++ LV+DEADR L++GF  ++  IL +LPK
Sbjct: 133 ELRRGVEILIATPGRLLDHVQQKTANLGQ-VQILVLDEADRMLDMGFLPDLQRILNLLPK 191

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQT+LFSAT + +++ LA    +       I+  +  A    + Q    V    +   +
Sbjct: 192 ERQTLLFSATFSPEIKKLASTYLRNPQT---IEVARSNAAASTVTQIVYDVAEGDKQAAV 248

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              ++    K++IVF +S  G    A  +    +    +HG + QS+R      F R E 
Sbjct: 249 VKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEI 308

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
             L+ TDVAARGLDI  +  ++ +D P   ++Y+HR+GRT R     G A+    P+E
Sbjct: 309 EALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRA-GASGDALSLCSPNE 365

ref|XP_508798.1| PREDICTED: similar to probable RNA helicase (EC 3.6.1.-) RCK - human [Pan troglodytes]
(473 aa)

Score: 199 bits (507), Expect: 2.00851e-49
Length: 339, Idn/Pos/Gap = 116/192/10 (34%/56%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  96 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 155

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E L     + ++   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 156 ERLD----LKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR 211

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L +  ++++ATPGR+LD ++     V +H++ +V+DEAD+ L   F + M +I+  LPK 
Sbjct: 212 LDDTVHVVIATPGRILDLIKKGVAKV-DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 271 RQILLYSATFPLSVQKFMN-SHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 326

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 327 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRT 547
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+
Sbjct: 387 NLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRS 425

ref|ZP_00150344.2| COG0513: Superfamily II DNA and RNA helicases [Dechloromonas aromatica RCB]
(507 aa)

Score: 199 bits (507), Expect: 2.11162e-49
Length: 377, Idn/Pos/Gap = 132/206/10 (35%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           F  L L+   LR + + G+ + T IQA+AIPL +SG+DI+  A+TG+GKT AF +PI++ 
Sbjct:  25 FADLGLAPELLRAVLDEGYTKPTPIQAQAIPLVISGKDIMGGAQTGTGKTAAFTLPILQR  84

Query: 271 LLYKAKWMP---RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           +L  A   P   ++   A+I+APTRELAMQ+F  +   + H         GG + R +  
Sbjct:  85 ILPFASSSPSPAKHPVRALILAPTRELAMQVFESVKTYSKHTPIRAMCAYGGVDIRPQIA 144

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           +L  G  ILVATPGRLLDH+++ +   F  ++ LV+DEADR L++GF  ++  IL +LP 
Sbjct: 145 ELKKGVEILVATPGRLLDHVEN-KSVSFNSVQALVLDEADRMLDMGFVPDVTRILNMLPA 203

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQ++LFSAT + +++ LA    +   L   I+  +     + +      V    +  LL
Sbjct: 204 QRQSLLFSATFSEEIKKLADTMLKSPIL---IEVARRNQVSDTITHRVHPVSEYGKRGLL 260

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              LK  + ++ IVF  +  G       L    +    +HG + Q +R      F   E 
Sbjct: 261 TKLLKSGEIRQCIVFCRTKQGCSRLTRELQRAGIKADAIHGDKSQLERIKALEAFKGGET 320

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVG 567
             L+ TDVAARGLD+  + +++ Y+ P  P++Y+HR+GRT R    +G AI  +   EV 
Sbjct: 321 DALIATDVAARGLDVDDLPYVINYELPHTPEDYVHRIGRTGRA-GKKGNAISLVSAHEVC 379

Query: 568 FLQHLRD-AKVPLNEYE 583
           +L  +    K P+ + E
Sbjct: 380 YLVDIEKLIKRPIEQVE 396

ref|ZP_00153998.2| COG0513: Superfamily II DNA and RNA helicases [Rickettsia rickettsii]
(410 aa)

Score: 199 bits (507), Expect: 2.12931e-49
Length: 351, Idn/Pos/Gap = 119/198/14 (33%/56%/3%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAK 276
           LSE  +  +E M     TEIQ ++IP+A++G DILAS++TGSGKTLA+L+P+++   K  
Sbjct:   6 LSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFIK--  63

Query: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNIL 336
               N T A+I+ PTRELA QI   L+ + + +    A+++GG     +  +L     ++
Sbjct:  64 ----NKTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFMQLKKNPKVI 119

Query: 337 VATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFS 395
           + TPGR++DHL   RG +  + +   V+DE DR L++G +E++ EI + LP+ RQ ++FS
Sbjct: 120 IGTPGRIIDHLN--RGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFS 177

Query: 396 ATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQ 455
           AT    +  +++  +   P+ + + A    A    ++Q    V  +++F  L   L  ++
Sbjct: 178 ATMPKHIIAVSQ-KYLNNPVRITVGATNKAAA--EIKQESMHVSDKEKFSALTKQLG-HR 233

Query: 456 RKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDV 515
              +I+F+ +       A++L Y +     +HG   Q +R      F +  H  ++ TDV
Sbjct: 234 EGSVIIFVKTKRSADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDV 293

Query: 516 AARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
           AARGLDIP    ++ YD P  P++Y+HR+GRT R     G A+ F+ P +V
Sbjct: 294 AARGLDIPHTQHVINYDLPMCPEDYLHRIGRTGRA-GATGHALSFISPDDV 343

gb|AAC00620.1| Similar ATP-dependent RNA Helicase [Arabidopsis thaliana]
pir||D96799 hypothetical protein F22K20.13 [imported] - Arabidopsis thaliana
(845 aa)

Score: 199 bits (507), Expect: 2.16515e-49
Length: 364, Idn/Pos/Gap = 123/204/10 (33%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+SL L       I++ G+   T IQ + +PL LSG D++A ARTGSGKT AFLIP++E 
Sbjct:  30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK  89

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L   + +P+ G  A+I++PTR+LA Q      +L        ++++GG +   + E+L  
Sbjct:  90 L--KQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTK 147

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++++ATPGRL+  L          + ++V DEAD    +GF E++H+IL  L + RQT
Sbjct: 148 GPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQT 207

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT  + + + AK   ++ P  + +D E  ++    L+  F  V  E+++  L   +
Sbjct: 208 LLFSATLPSALAEFAKAGLRE-PQLVRLDVENKISP--DLKLSFLTVRPEEKYSALLYLV 264

Query: 452 KR--NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           +   +  ++ ++F+S+ + V+F   L    ++     +G   Q  R      F  R+   
Sbjct: 265 REHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTML 324

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGF 568
           L+ TD+AARG+DIP +D ++ +D P  PK ++HRVGR AR   GR G A  F+ P ++ +
Sbjct: 325 LIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARA--GRTGCAYSFVTPEDMPY 382

Query: 569 LQHL 572
           +  L
Sbjct: 383 MLDL 386

gb|AAL19757.1| putative ATP-dependent RNA helicase [Salmonella typhimurium LT2]
ref|NP_459798.1| putative ATP-dependent RNA helicase [Salmonella typhimurium LT2]
(454 aa)

Score: 199 bits (506), Expect: 2.23863e-49
Length: 341, Idn/Pos/Gap = 125/195/6 (36%/57%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL L+   LR I E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 L--YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L  ++     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q +LFSAT +  ++ LA+    + PL + + A +  A+ E + Q    V  +++  LL  
Sbjct: 182 QNLLFSATFSDDIKALAE-KLLRNPLEIEV-ARRNTAS-EQVTQHVHFVDKKRKRELLSQ 238

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            + +   ++++VF  + +G    AE LN   +    +HG + Q  RT    +F   +   
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

gb|EAL41067.1| ENSANGP00000025552 [Anopheles gambiae str. PEST]
ref|XP_559169.1| ENSANGP00000025552 [Anopheles gambiae str. PEST]
(336 aa)

Score: 199 bits (506), Expect: 2.29537e-49
Length: 352, Idn/Pos/Gap = 128/197/43 (36%/55%/12%)

Query: 234 TEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLY--KAKWMPRNGTGAIIIAPT 291
           T +Q+ AIP  L G D L  A+TGSGKTLA+ +P++E L+  + +    +G  A++I PT
Sbjct:   1 TTVQSMAIPSLLKGTDALIRAQTGSGKTLAYALPLIERLHTIRPQIHRSDGIRAVVIVPT  60

Query: 292 RELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQST 350
           RELA+Q + ++  L           + GG  R+TE  +L  G NIL+ATPGRL DH+++T
Sbjct:  61 RELAVQTYELIQKLLKPFTWIVPGYLTGGEKRKTEKARLRAGLNILIATPGRLCDHIRNT 120

Query: 351 RGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR-----------QTMLFSATQT 399
               F ++  LV+DEADR LE+G+E ++ +I+  + + R           QT+L SAT T
Sbjct: 121 ESLKFGNVCCLVLDEADRLLELGYETDVKQIIEAMREAREEKDENEAMKLQTVLLSATLT 180

Query: 400 TKVEDLAKVSFQQKPLHLGIDAE----------QPVATVEGLQQGFTIVPSEQRFRLLFT 449
             V++LA ++ Q  P+++   A             V+    ++Q + +   +QR   L  
Sbjct: 181 ASVKELAGLTLQD-PVYVETSANICTDQLLNVGDYVSIPATVKQRYLVTVPKQRLVALSA 239

Query: 450 FLKRNQRK---KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
            +   QR+   KI+VFM++ + V F+ +++  ++              R S F EF +  
Sbjct: 240 LIVHEQRQKPSKILVFMATQDLVNFHYDVMTELE--------------RISVFNEFRKAT 285

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAI 558
            A L+CTDVAARG+DIP VD +VQY  P    +Y+HRVGRTAR  H  G+A+
Sbjct: 286 AAVLICTDVAARGIDIPLVDLVVQYHAPQILADYVHRVGRTARAGH-TGKAV 336

emb|CAG60336.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_447399.1| unnamed protein product [Candida glabrata]
(507 aa)

Score: 199 bits (506), Expect: 2.3146e-49
Length: 342, Idn/Pos/Gap = 121/185/11 (35%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+   L    L GI E GF + + IQ  AIP+A++GRDILA A+ G+GKT AF+IP +E 
Sbjct:  33 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE-  91

Query: 272 LYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
               K  P+ N   A+I+ PTRELA+Q   V+  L  H   +  +  GG N R +  +L 
Sbjct:  92 ----KIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVSCMVTTGGTNLRDDILRLN 147

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              ++LV TPGR+LD L S +          V+DEAD+ L   F+  + ++L  LPK  Q
Sbjct: 148 ETVHVLVGTPGRVLD-LASRKVADLSECSLFVMDEADKMLSRDFKTIIEQVLTFLPKAHQ 206

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           ++LFSAT    V++   V    KP  + +  E    T++G+ Q +  V   Q+   L T 
Sbjct: 207 SLLFSATFPLTVKEFM-VKHLHKPYEINLMEE---LTLKGITQYYAFVEERQKLHCLNTL 262

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
             + Q  + I+F +S N V+  A+ +  +       H + KQ  R   F +F + +  TL
Sbjct: 263 FSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQDRNKVFHDFRQGKVRTL 322

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
           +C+D+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 323 VCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 364

ref|NP_805828.1| putative ATP-dependent RNA helicase rhlE [Salmonella enterica subsp. enterica serovar Typhi Ty2]
ref|NP_455358.1| putative ATP-dependent RNA helicase rhlE [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
emb|CAD05267.1| putative ATP-dependent RNA helicase rhlE [Salmonella enterica subsp. enterica serovar Typhi]
gb|AAO69688.1| putative ATP-dependent RNA helicase rhlE [Salmonella enterica subsp. enterica serovar Typhi Ty2]
pir||AI0599 probable ATP-dependent RNA helicase rhlE STY0855 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18)
(455 aa)

Score: 199 bits (506), Expect: 2.35355e-49
Length: 341, Idn/Pos/Gap = 125/195/6 (36%/57%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL L+   LR I E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 L--YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L  ++     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q +LFSAT +  ++ LA+    + PL + + A +  A+ E + Q    V  +++  LL  
Sbjct: 182 QNLLFSATFSDDIKALAE-KLLRNPLEIEV-ARRNTAS-EQVTQHVHFVDKKRKRELLSQ 238

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            + +   ++++VF  + +G    AE LN   +    +HG + Q  RT    +F   +   
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

ref|YP_151155.1| putative ATP-dependent RNA helicase rhlE [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
gb|AAV77843.1| putative ATP-dependent RNA helicase rhlE [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150]
(453 aa)

Score: 199 bits (506), Expect: 2.35355e-49
Length: 341, Idn/Pos/Gap = 125/195/6 (36%/57%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL L+   LR I E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 L--YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L  ++     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q +LFSAT +  ++ LA+    + PL + + A +  A+ E + Q    V  +++  LL  
Sbjct: 182 QNLLFSATFSDDIKALAE-KLLRNPLEIEV-ARRNTAS-EQVTQHVHFVDKKRKRELLSQ 238

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            + +   ++++VF  + +G    AE LN   +    +HG + Q  RT    +F   +   
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

ref|ZP_00355887.1| COG0513: Superfamily II DNA and RNA helicases [Chloroflexus aurantiacus]
(552 aa)

Score: 199 bits (506), Expect: 2.39316e-49
Length: 361, Idn/Pos/Gap = 137/199/14 (37%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  +  +  +G+   T IQA+AIPL L+GRD++A A+TG+GKT AF +P++E 
Sbjct:   4 FAELGLSDALVSTLSGLGYDEPTPIQAQAIPLLLAGRDVIAQAQTGTGKTAAFALPMIER  63

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +  A  +      A+++APTRELA+Q+   +H    H       + GG     +   L  
Sbjct:  64 VTDALVVQ-----ALVLAPTRELAVQVAEAIHRYGRHRSLRVLPIYGGQPIERQLRGLAQ 118

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           GT ++V TPGR+LDHL+  RG + F+HLR +V+DEAD  L++GF EE+  IL++ P  RQ
Sbjct: 119 GTQVVVGTPGRVLDHLK--RGSLRFDHLRMVVLDEADEMLDMGFAEELEAILQLTPTERQ 176

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T LFSAT    V++L  + + ++P+ + I AEQ   T   ++Q +  V +  +   L   
Sbjct: 177 TALFSATLPPAVQNLT-LRYTRQPVRVSIAAEQ--LTTPRIRQTYYEVLARDKLDALCRV 233

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     +  IVF  +        E L         LHG   Q+ R      F   +   L
Sbjct: 234 LDAEMPQLAIVFCRTRQEADDIGERLQGRGYAAESLHGDLSQAARDRVMRRFREGQLDVL 293

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFL 569
           + TDVAARGLDI  V  ++ YD P +P+ Y+HR+GRT R   GR G AI F+ P E   L
Sbjct: 294 VATDVAARGLDIAEVSHVINYDVPTDPESYVHRIGRTGRA--GREGVAITFITPRERRML 351

Query: 570 Q 570
           Q
Sbjct: 352 Q 352

ref|YP_215804.1| putative ATP-dependent RNA helicase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
gb|AAX64723.1| putative ATP-dependent RNA helicase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67]
(453 aa)

Score: 199 bits (506), Expect: 2.57979e-49
Length: 341, Idn/Pos/Gap = 125/195/6 (36%/57%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL L+   LR I E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 L--YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L  ++     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q +LFSAT +  ++ LA+    + PL + + A +  A+ E + Q    V  +++  LL  
Sbjct: 182 QNLLFSATFSDDIKALAE-KLLRNPLEIEV-ARRNTAS-EQVTQHVHFVDKKRKRELLSQ 238

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            + +   ++++VF  + +G    AE LN   +    +HG + Q  RT    +F   +   
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

ref|ZP_00285607.1| COG0513: Superfamily II DNA and RNA helicases [Enterococcus faecium]
(503 aa)

Score: 199 bits (506), Expect: 2.73495e-49
Length: 411, Idn/Pos/Gap = 143/213/15 (34%/51%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L LS   L+ +E  GF   T IQA  IPLAL+G+D++  A+TG+GKT AF +P++E
Sbjct:   2 KFKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE  61

Query: 271 LLYKAKWMP-RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
                K  P R+    ++IAPTRELA+Q    L+ L          V GGA+   +   L
Sbjct:  62 -----KIDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGL 116

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
            +  +I+V TPGR+LDH+ +        ++ LV+DEAD  L +GF E++ +I+  +P  R
Sbjct: 117 KDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQR 175

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           QT+LFSAT    ++++  V F + P H+ I A++   T + + Q +      ++F ++  
Sbjct: 176 QTLLFSATMPPAIKNIG-VKFMKNPHHVKIKAKE--MTADLIDQYYVRAKEYEKFDIMTR 232

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
                  +  IVF  +   V   A  L         +HG   Q KR S    F       
Sbjct: 233 LFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDI 292

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ TDVAARGLDI  V  +  YD P +P+ Y+HR+GRT R   G G ++ F+ P+E+ +L
Sbjct: 293 LVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKG-GMSVTFVTPNEMDYL 351

Query: 570 QHLRD-AKVPLNEYEFPKEKLADIQTQLEKLVEGNYYLQKSARDGFRSYLQ 619
             + +  K  +     P EK A  + QL   VE      K A +G   YLQ
Sbjct: 352 HVIENLTKKRMTTLRPPTEKEA-FKGQLGAAVE--QIETKLAENGLDKYLQ 399

ref|YP_011199.1| ATP-dependent RNA helicase RhlE [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough]
gb|AAS96458.1| ATP-dependent RNA helicase RhlE [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough]
(462 aa)

Score: 199 bits (505), Expect: 3.15175e-49
Length: 381, Idn/Pos/Gap = 140/204/15 (36%/53%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   L  ++ MG+ + T +Q  AIP AL+G D+LA A TG+GKT AF++P+++ 
Sbjct:   3 FADLSLSPRLLAALDGMGYRQPTPVQRGAIPPALAGEDVLALAATGTGKTAAFVLPMLQR  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L      PR    A+++APTRELA Q    +  L S        + GG     +A +L  
Sbjct:  63 LMDG---PRGAVRALVVAPTRELAEQTHDHVRRLGSMSRLRSTTIYGGVGVVAQALRLRA 119

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           G  ++V  PGRLLDH++  RG +    L  LV+DE D   ++GF  ++  +L ++P T Q
Sbjct: 120 GVEVVVGCPGRLLDHIR--RGNLDLSSLEVLVLDEGDSLFDLGFLADVRMLLGMVPATCQ 177

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
            MLFSAT    V  LA  + +Q P+ + +DA QP +TV         VP+  R  LL TF
Sbjct: 178 RMLFSATMPDAVRVLAAEALRQ-PVTVQVDAVQPASTV---HHALYPVPAHLRTPLLKTF 233

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L+      ++VF+ + +G +   + L+ +   V  L GK  Q +R +    F    +  L
Sbjct: 234 LRSGPEGSVVVFVRTRHGARRLWQQLDNVGFSVTCLQGKLSQRRRLAALEGFRDGRYDVL 293

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLDI  V  +V YD P     YIHRVGRT R     G A+ F+ P++     
Sbjct: 294 VATDVAARGLDISQVTHVVNYDVPSTADAYIHRVGRTGRAARN-GTAMTFVTPADEA--- 349

Query: 571 HLRDAKVPLNEYEFPKEKLAD 591
            +R+ +  L     P+E+LAD
Sbjct: 350 QVRNIERVLGTV-IPRERLAD 369

ref|XP_342583.2| PREDICTED: similar to Probable ATP-dependent RNA helicase DDX27 (DEAD-box protein 27) [Rattus norvegicus]
(906 aa)

Score: 199 bits (505), Expect: 3.15175e-49
Length: 404, Idn/Pos/Gap = 147/221/25 (36%/54%/6%)

Query: 217 LSEPTLR--------GIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI 268
           LS PTL          I  MGF + T IQ   IP+ L G+DI A A TG+GKT AF +P+
Sbjct: 241 LSHPTLSSESSLTPLAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPV 300

Query: 269 VE-LLYKAKWMPRNG--TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTE 325
           +E L+YK    PR    T  +++ PTREL +Q+  V   LA     T  + +GG + +++
Sbjct: 301 LERLIYK----PRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQ 356

Query: 326 AEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
              L    +IL+ATPGRL+DHL +   F    +  L++DEADR L+  FEE+M EI+R+ 
Sbjct: 357 EAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMC 416

Query: 386 PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT-IVPSEQ-- 442
              RQTMLFSAT T +V+DLA VS +  P+ + +++   VA    L+Q F  I P+ +  
Sbjct: 417 SHHRQTMLFSATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGD 473

Query: 443 RFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEF 502
           R  ++   L R     +++F  +         LL  + + V +LHG   Q++R      F
Sbjct: 474 REAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRF 533

Query: 503 ARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFL 561
              +   L+ TDVAARGLDI  V  ++ +  P+  K Y+HRVGRTAR   GR GR++  +
Sbjct: 534 KDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARA--GRAGRSVSLV 591

Query: 562 LPSEVGFLQHL-RDAKVPLNEYEFPKEKLADIQTQLEKLVEGNY 604
              E   L+ + + AK P+     P++ +   + ++EK+ +  Y
Sbjct: 592 GEEERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 635

ref|NP_752810.1| Putative ATP-dependent RNA helicase rhlE [Escherichia coli CFT073]
gb|AAN79353.1| Putative ATP-dependent RNA helicase rhlE [Escherichia coli CFT073]
(453 aa)

Score: 199 bits (505), Expect: 3.20478e-49
Length: 343, Idn/Pos/Gap = 125/192/10 (36%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL LS   LR + E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 LY--KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L   +     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLH--LGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
           Q +LFSAT +  ++ LA     +K LH  L I+  +     + + Q    V  +++  LL
Sbjct: 182 QNLLFSATFSDDIKALA-----EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              + +   ++++VF  + +G    AE LN   +    +HG + Q  RT    +F   + 
Sbjct: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

gb|AAW43867.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
ref|XP_571174.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
(606 aa)

Score: 199 bits (505), Expect: 3.31355e-49
Length: 510, Idn/Pos/Gap = 160/254/41 (31%/49%/8%)

Query: 136 TPAPVMETELQNAAARTPADEEVASSRATVHEMEPLARPCPEV---TQKSSPALQSLSSE 192
           T  P+M       A          ++RA  +    LA   P +   T  S+P    +S+ 
Sbjct:   4 TAVPIMSNPPIRGAGNRFKRGGFHAARAQANPTRSLATTQPGLIVKTTDSTPVPSGISTP  63

Query: 193 HASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILA 252
              ++ + +  +GL +P  F SLP             F   TE+QA  +P  L+G D+LA
Sbjct:  64 AGIDRPRFRDFNGL-SPEIFPSLP-------------FETCTEVQAATLPTILAGDDVLA 109

Query: 253 SARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA---SHH 309
            A+TG+GKTLAFL+P+V+ L  A   P   T  +I++PTRELA QI  V   ++   S  
Sbjct: 110 QAKTGTGKTLAFLVPVVQRLLSAPMPPSALTSILILSPTRELAQQINEVAERMSTALSKK 169

Query: 310 HQTRAIVMGGANRRTEAEKLING-TNILVATPGRLLDHLQSTRGFV---FEHLRFLVIDE 365
             TR++V GG N   + + L +   +ILVATPGRLLD +++  G +   F  L+ +V+DE
Sbjct: 170 FGTRSVV-GGTNMDRDIKNLKSKRADILVATPGRLLDLMEN--GGIKARFAQLKMIVLDE 226

Query: 366 ADRCLEIGFEEEMHEILRILPK----TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDA 421
           ADR L+ GF  E+ +I   LP      RQT+LFSAT  T+V  +A ++ ++    +    
Sbjct: 227 ADRLLDAGFRRELVKIFDYLPAPHAVPRQTLLFSATLPTEVHSIASIALRKDYKFITTLT 286

Query: 422 EQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLN 477
           E+ V   E ++Q   +V +E         ++  + K    K+I F+ +      + ++ +
Sbjct: 287 EEDVNAHEHVKQEVLVVSAEDLIPAAMEVMRNEESKNKDFKVIAFLPTARAAALFHDVFS 346

Query: 478 YIDV--PVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPD 535
            + +  PV ++H +  QSKR ST   F + E   L  +DV ARG+D+  V  +VQ   P 
Sbjct: 347 SLPIPYPVWEIHSRLSQSKRASTTEAFRQAERGVLFSSDVTARGIDVKGVTAVVQIGLPS 406

Query: 536 EPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEY-EFPKEKLADIQT 594
             ++Y+HR+GRTAR     G  IL L   E  FL+        L+ Y     E ++  + 
Sbjct: 407 SSEQYVHRLGRTARA-GAEGHGILMLGDFESHFLRDKTLQTFTLHPYPTIAPEIMSRSRD 465

Query: 595 QLEKLVEGNYYLQKSARDGFRSYLQAYASH 624
            + K +E  +   +S    ++++L  Y SH
Sbjct: 466 AVNKALE--FVSPESKAQAYQAWLGYYNSH 493

gb|AAG55168.1| putative ATP-dependent RNA helicase [Escherichia coli O157:H7 EDL933]
dbj|BAB34298.1| putative ATP-dependent RNA helicase [Escherichia coli O157:H7]
pir||C90738 probable ATP-dependent RNA helicase [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952)
pir||D85588 probable ATP-dependent RNA helicase rhlE [imported] - Escherichia coli (strain O157:H7, substrain EDL933)
ref|NP_308902.1| putative ATP-dependent RNA helicase [Escherichia coli O157:H7]
ref|NP_286560.1| putative ATP-dependent RNA helicase [Escherichia coli O157:H7 EDL933]
(455 aa)

Score: 199 bits (505), Expect: 3.45471e-49
Length: 343, Idn/Pos/Gap = 125/192/10 (36%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL LS   LR + E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 LY--KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L   +     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLH--LGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
           Q +LFSAT +  ++ LA     +K LH  L I+  +     + + Q    V  +++  LL
Sbjct: 182 QNLLFSATFSDDIKALA-----EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              + +   ++++VF  + +G    AE LN   +    +HG + Q  RT    +F   + 
Sbjct: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

ref|NP_415318.1| putative ATP-dependent RNA helicase [Escherichia coli K12]
gb|AAC73884.1| putative ATP-dependent RNA helicase [Escherichia coli K12]
dbj|BAA35463.1| Putative ATP-dependent RNA helicase RhlE. [Escherichia coli K12]
dbj|BAA35457.1| Putative ATP-dependent RNA helicase RhlE. [Escherichia coli K12]
pir||E64816 probable ATP-dependent RNA helicase rhlE - Escherichia coli  (strain K-12)
sp|P25888|RHLE_ECOLI Putative ATP-dependent RNA helicase rhlE
gb|AAA53653.1| ATP-dependent RNA helicase
(454 aa)

Score: 199 bits (505), Expect: 3.45471e-49
Length: 343, Idn/Pos/Gap = 125/192/10 (36%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL LS   LR + E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 LY--KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L   +     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLH--LGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
           Q +LFSAT +  ++ LA     +K LH  L I+  +     + + Q    V  +++  LL
Sbjct: 182 QNLLFSATFSDDIKALA-----EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              + +   ++++VF  + +G    AE LN   +    +HG + Q  RT    +F   + 
Sbjct: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

gb|AAM45033.1| putative RNA helicase [Arabidopsis thaliana]
gb|AAL87312.1| putative RNA helicase [Arabidopsis thaliana]
ref|NP_191975.2| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
ref|NP_849535.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
(505 aa)

Score: 199 bits (505), Expect: 3.54227e-49
Length: 343, Idn/Pos/Gap = 120/182/9 (34%/53%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI E GF R + IQ  +IP+AL+GRDILA A+ G+GKT AF IP++
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           E + +      N   A+II PTRELA+Q   V  +L  H      +  GG + + +  +L
Sbjct: 191 EKIDQ----DNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 246

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               ++LV TPGR+LD L      V +    LV+DEAD+ L   F+  +  ++  LP++R
Sbjct: 247 YQPVHLLVGTPGRILD-LTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESR 305

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q ++FSAT    V+D  K  F   P  + +  E    T++G+ Q +  V   Q+   L T
Sbjct: 306 QILMFSATFPVTVKDF-KDRFLTNPYVINLMDE---LTLKGITQFYAFVEERQKIHCLNT 361

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
              + Q  + I+F +S N V+  A+ +  +      +H K  Q  R   F +F       
Sbjct: 362 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 421

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
           L+CTD+  RG+DI AV+ ++ +D P   + Y+HRVGR+ R  H
Sbjct: 422 LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGH 464

dbj|BAA19572.1| DEAD family RNA helicase~germ cell specific in Bombyx 5th instar larva, a material factor [Bombyx mori]
(601 aa)

Score: 199 bits (505), Expect: 3.72412e-49
Length: 358, Idn/Pos/Gap = 128/193/14 (35%/53%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F++  L +  L  + + G+ + T IQ  AIP+ +SGRD++  A+TGSGKT AFL+PI+ +
Sbjct: 182 FETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINM 241

Query: 272 LYK--AKWMPRNGTG---AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           L +     +  NG      II++PTREL +QIF      +       A+  GG   R + 
Sbjct: 242 LLQDPKDLISENGCAQPQVIIVSPTRELTLQIFNEARKFSYGSVLKVAVAYGGTAVRHQG 301

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGF----EEEMHEIL 382
           + +  G +ILVATPGRL D ++  R   F  +RF+V+DEADR L++GF    E+ M    
Sbjct: 302 DNIARGCHILVATPGRLHDFVERNR-VSFGSVRFVVLDEADRMLDMGFMPSIEKMMLHPT 360

Query: 383 RILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ 442
            +    RQT++FSAT    ++ LA   F    L + +      +T   ++Q F  V   +
Sbjct: 361 MVETTKRQTLMFSATFPEDIQHLAG-RFLNNYLFVAVGIVGGAST--DVEQIFIEVTKYE 417

Query: 443 RFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEF 502
           +   L   ++ N  K+I+VF+ +     F A +L+   +    +HG + Q +R      F
Sbjct: 418 KRNSLKQLIEENDGKRILVFVETKRNADFIAAMLSEQQLLTSSIHGDRMQREREEALQNF 477

Query: 503 ARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILF 560
              +H  L+ T VAARGLDI  VD +V YD P    EY+HR+GRT R V  RG+A+ F
Sbjct: 478 KSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGR-VGNRGKAVSF 534

emb|CAG05307.1| unnamed protein product [Tetraodon nigroviridis]
(493 aa)

Score: 198 bits (504), Expect: 3.81852e-49
Length: 298, Idn/Pos/Gap = 120/176/17 (40%/59%/5%)

Query: 256 TGSGKTLAFLIPIVELLYK-AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TR 313
           TGSGKTLAF+IPI+ELL K  + + +   GA++I PTRELA+QI  V+        Q T+
Sbjct: 198 TGSGKTLAFVIPIIELLLKREEKLKKMQVGALVITPTRELALQISQVMEQFLQRFPQFTQ 257

Query: 314 AIVMGGANRRTEAEKLIN-GTNILVATPGRLLDHLQSTRGFV-----FEHLRFLVIDEAD 367
            +++GG+N   + EK  + G NI++ATPGRL D  +     +      + L  LV+DEAD
Sbjct: 258 ILLIGGSNPIEDVEKFKDQGANIVIATPGRLEDMFKRKADGLDLACWVKSLEVLVLDEAD 317

Query: 368 RCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA- 426
           R L++GFE  ++ IL  LPK R+T LFSATQT ++E L +   +  P+ + +  +   A 
Sbjct: 318 RLLDMGFEASLNAILGHLPKQRRTGLFSATQTQELEKLVRAGLRN-PVRITVKEKGAAAS 376

Query: 427 ----TVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI--D 480
               T   L   +TI  SE +F  L  FL++++ +K +VF S+C  V+++   L  +   
Sbjct: 377 AVQKTPSRLSNYYTICRSEDKFNHLVAFLRQHKHEKNLVFFSTCACVEYFGRALETLIKK 436

Query: 481 VPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPK 538
             V  +HGK K  KR   F EF   +   L+CTDV ARG+DIP V+W++QYDPP   +
Sbjct: 437 ANVCCIHGKMK-DKRNKIFAEFRSLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSAR 493

gb|AAD20136.1| autoaggregation-mediating protein [Lactobacillus reuteri]
(497 aa)

Score: 198 bits (504), Expect: 3.85051e-49
Length: 362, Idn/Pos/Gap = 126/194/9 (34%/53%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L LS+  L+ I+  G+   T IQ + IP+ L G+D++  A+TG+GKT AF +PI+E
Sbjct:   2 KFSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLEGKDVIGQAQTGTGKTAAFGLPIIE  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            +            AIII+PTRELA+Q    L+ L    H    +V GGA+ R + + L 
Sbjct:  62 NVDTEN----PNIQAIIISPTRELAIQTQEELYRLGKDKHVRVQVVYGGADIRRQIKSLK 117

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
               ILV TPGRL DH+ +      +H++ LV+DEAD  L +GF E++  I++  P  RQ
Sbjct: 118 QHPQILVGTPGRLRDHI-NRHTVKLDHIKTLVLDEADEMLNMGFLEDIESIIKETPDDRQ 176

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT   +++ +  V F   P  + I A++   T + + Q +      ++F ++   
Sbjct: 177 TLLFSATMPPEIKRIG-VQFMSDPETVRIKAKE--LTTDLVDQYYVRARDYEKFDIMTRL 233

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +        IVF  +   V   ++ L         +HG   Q KR+   ++F   E   L
Sbjct: 234 IDVQDPDLTIVFGRTKRRVDELSKGLIARGYNAAGIHGDLTQDKRSKIMWKFKNNELDIL 293

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLDI  V  +  YD P +P  Y+HR+GRT R  H  G ++ F+ P+E+ +L 
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPSDPDSYVHRIGRTGRAGH-HGVSLTFVTPNEMDYLH 352

Query: 571 HL 572
            +
Sbjct: 353 EI 354

ref|NP_651970.1| CG2173-PA [Drosophila melanogaster]
gb|AAO49161.1| LD15481p [Drosophila melanogaster]
gb|AAF59119.1| CG2173-PA [Drosophila melanogaster]
(782 aa)

Score: 198 bits (504), Expect: 3.91531e-49
Length: 349, Idn/Pos/Gap = 129/192/10 (36%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  + LS P +R I  +G+   T IQA  IP+AL GRDI   A TG+GKT A+++P +E 
Sbjct: 159 FYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLER 218

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L       +  T  +++ PTREL  Q++ V   L         + +GG + + +   L  
Sbjct: 219 LLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQ 278

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I++ATPGRL+DH+++T  F  + +  L++DEADR L+  F E+M EI+    KTRQT
Sbjct: 279 NPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQT 338

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ---RFRLLF 448
           MLFSAT + +V+DLA VS   KP+ + ++  Q VA    L+Q F  +  ++   R  +L 
Sbjct: 339 MLFSATMSEQVKDLAAVSL-DKPIKVFVNNNQQVAF--NLRQEFIRIREDKEGDREPILA 395

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           + + R      +VF+ +         LL  + V   +LHG   Q +R  +  +F   +  
Sbjct: 396 SLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQID 455

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
            L+ TDVAARGLDI  V  ++ +  P   + YIHRVGRTAR     GRA
Sbjct: 456 VLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARA----GRA 500

ref|NP_753719.1| ATP-independent RNA helicase dbpA [Escherichia coli CFT073]
gb|AAN80281.1| ATP-independent RNA helicase dbpA [Escherichia coli CFT073]
(457 aa)

Score: 198 bits (504), Expect: 4.0821e-49
Length: 359, Idn/Pos/Gap = 132/204/18 (36%/56%/5%)

Query: 212 FDSLPLSEPT-LRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           F +L +  P  L  + E+G+  MT +QA A+P  L+G+D+   A+TGSGKT AF + +++
Sbjct:   4 FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQ  63

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRTEAEKL 329
            +  + +     T A+++ PTRELA Q+ G L  LA     T+ + + GG     + + L
Sbjct:  64 QIDASLFQ----TQALVLCPTRELADQVAGELRRLARFLSNTKILTLCGGQPFGMQRDSL 119

Query: 330 INGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
            +  +I+VATPGRLLDHLQ  +G V  + L  LV+DEADR L++GF + + +++R  P +
Sbjct: 120 QHAPHIIVATPGRLLDHLQ--KGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPAS 177

Query: 389 RQTMLFSATQTTKVEDLAKVS--FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           RQT+LFSAT     E +A +S   Q+ PL + ID+   +  +E   Q F    S+ +  L
Sbjct: 178 RQTLLFSATWP---EAIAAISGRVQRDPLAIEIDSTDALPPIE---QQFYETSSKGKIPL 231

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L  +Q    +VF ++    +   + LN +    L LHG  +Q  R  T   FA   
Sbjct: 232 LQRLLSLHQPSSCVVFCNTKKDCQSVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGS 291

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
              L+ TDVAARGLDI +++ +V ++   +P+ ++HR+GRTAR  +  G AI F  P E
Sbjct: 292 ARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNS-GLAISFCAPEE 349

ref|ZP_00324074.1| COG0513: Superfamily II DNA and RNA helicases [Trichodesmium erythraeum IMS101]
(454 aa)

Score: 198 bits (504), Expect: 4.11631e-49
Length: 343, Idn/Pos/Gap = 125/192/10 (36%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL LS   LR + E G+   T IQ +AIP  L GRD++ASA+TG+GKT  F +P+++ 
Sbjct:   3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH  62

Query: 272 LY--KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L   +     R    A+I+ PTRELA QI   + D + + +    +V GG +   +  KL
Sbjct:  63 LITRQPHAKGRRPVRALILTPTRELAAQIGEHVRDYSKYLNIRSLVVFGGVSINPQMMKL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L+       + +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 123 RGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLH--LGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
           Q +LFSAT +  ++ LA     +K LH  L I+  +     + + Q    V  +++  LL
Sbjct: 182 QNLLFSATFSDDIKALA-----EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              + +   ++++VF  + +G    AE LN   +    +HG + Q  RT    +F   + 
Sbjct: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRA 339

emb|CAH01793.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
ref|XP_452942.1| unnamed protein product [Kluyveromyces lactis]
(514 aa)

Score: 198 bits (504), Expect: 4.40045e-49
Length: 356, Idn/Pos/Gap = 127/193/12 (35%/54%/3%)

Query: 199 QPKPSSGLLTPHR-FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTG 257
           +P+    L T  R F+   L    L GI E GF + + IQ  AIP+A++G+DILA A+ G
Sbjct:  24 RPQTDDVLNTKGRSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNG  83

Query: 258 SGKTLAFLIPIVELLYKAKWMPR-NGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV 316
           +GKT AF+IP +E     K  P+ N   A+I+ PTRELA+Q   V+  L  H   +  + 
Sbjct:  84 TGKTAAFVIPTLE-----KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVT 138

Query: 317 MGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEE 376
            GG N R +  +L    +ILV TPGR+LD L S R          ++DEAD+ L   F+ 
Sbjct: 139 TGGTNLRDDIMRLNEPVHILVGTPGRVLD-LASRRVTDLSECHLFIMDEADKMLSRDFKV 197

Query: 377 EMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFT 436
              +IL  LP+ RQ +LFSAT    V++   V   + P  + +  E    T++G+ Q + 
Sbjct: 198 LAEQILGFLPERRQLLLFSATFPVTVKEFM-VKHLKNPHEINLMDE---LTLKGISQFYA 253

Query: 437 IVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRT 496
            V  +Q+   L T   + Q  + I+F +S N V+  A+ +  +       H + KQS+R 
Sbjct: 254 FVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITELGFSCYYSHARMKQSERN 313

Query: 497 STFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
             F EF + +  TL+C+D+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 314 KVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 369

gb|EAL20595.1| hypothetical protein CNBE5150 [Cryptococcus neoformans var. neoformans B-3501A]
(606 aa)

Score: 198 bits (504), Expect: 4.74362e-49
Length: 510, Idn/Pos/Gap = 160/254/41 (31%/49%/8%)

Query: 136 TPAPVMETELQNAAARTPADEEVASSRATVHEMEPLARPCPEV---TQKSSPALQSLSSE 192
           T  P+M       A          ++RA  +    LA   P +   T  S+P    +S+ 
Sbjct:   4 TAVPIMSNPPIRGAGNRFKRGGFHAARAQANPTRSLATTQPGLIVKTTDSTPVPSGISTP  63

Query: 193 HASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILA 252
              ++ + +  +GL +P  F SLP             F   TE+QA  +P  L+G D+LA
Sbjct:  64 AGIDRPRFRDFNGL-SPEIFPSLP-------------FETCTEVQAATLPTILAGDDVLA 109

Query: 253 SARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLA---SHH 309
            A+TG+GKTLAFL+P+V+ L  A   P   T  +I++PTRELA QI  V   ++   S  
Sbjct: 110 QAKTGTGKTLAFLVPVVQRLLSAPMPPSALTSILILSPTRELAQQINEVAERMSTALSKK 169

Query: 310 HQTRAIVMGGANRRTEAEKLING-TNILVATPGRLLDHLQSTRGFV---FEHLRFLVIDE 365
             TR++V GG N   + + L +   +ILVATPGRLLD +++  G +   F  L+ +V+DE
Sbjct: 170 FGTRSVV-GGTNMDRDIKNLKSKRADILVATPGRLLDLMEN--GGIKARFAQLKMIVLDE 226

Query: 366 ADRCLEIGFEEEMHEILRILPK----TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDA 421
           ADR L+ GF  E+ +I   LP      RQT+LFSAT  T+V  +A ++ ++    +    
Sbjct: 227 ADRLLDAGFRRELVKIFDYLPAPHAVPRQTLLFSATLPTEVHSIASIALRKDYKFITTLT 286

Query: 422 EQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLN 477
           E+ V   E ++Q   +V +E         ++  + K    K+I F+ +      + ++ +
Sbjct: 287 EEDVNAHEHVKQEVLVVSAEDLIPAAMEVMRNEESKNKDFKVIAFLPTARAAALFHDVFS 346

Query: 478 YIDV--PVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPD 535
            + +  PV ++H +  QSKR ST   F + E   L  +DV ARG+D+  V  +VQ   P 
Sbjct: 347 SLPIPYPVWEIHSRLSQSKRASTTEAFRQAERGVLFSSDVTARGIDVKGVTAVVQIGLPS 406

Query: 536 EPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEY-EFPKEKLADIQT 594
             ++Y+HR+GRTAR     G  IL L   E  FL+        L+ Y     E ++  + 
Sbjct: 407 SSEQYVHRLGRTARA-GAEGHGILMLGDFESHFLRDKTLQTFTLHPYPTIAPEIMSRSRD 465

Query: 595 QLEKLVEGNYYLQKSARDGFRSYLQAYASH 624
            + K +E  +   +S    ++++L  Y SH
Sbjct: 466 AVNKALE--FVSPESKAQAYQAWLGYYNSH 493

ref|XP_395768.1| similar to CG2173-PA [Apis mellifera]
(496 aa)

Score: 198 bits (503), Expect: 5.15639e-49
Length: 385, Idn/Pos/Gap = 138/211/18 (35%/54%/4%)

Query: 224 GIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLYKAKWMPRNG 282
            I  M F   T IQA  IP+AL GRDI   A TG+GKT A+++P +E LLY+    P +G
Sbjct:  30 AITAMNFVHPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYR----PLDG  85

Query: 283 ---TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVAT 339
              +  +++ PTREL +Q++ V   L+        + +GG + + +   L    +I++AT
Sbjct:  86 PAISRVLVLVPTRELGVQVYQVTKQLSQFTTIEVGLSVGGLDVKAQEAVLRRNPDIVIAT 145

Query: 340 PGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQT 399
           PGRL+DHL++T  F  + +  L++DEADR L+  F E+M  I++   ++RQT+LFSAT T
Sbjct: 146 PGRLIDHLKNTPTFSLDSIEVLILDEADRMLDEYFAEQMKYIVKQCSRSRQTILFSATMT 205

Query: 400 TKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ---RFRLLFTFLKRNQR 456
            +V+DLA VS   KP+ + ID+ Q VA    L+Q F  +  E+   R  +L   + R   
Sbjct: 206 EEVKDLAAVSL-NKPVKVFIDSNQDVAF--NLRQEFIRIRKEREGDREAILAALICRTFH 262

Query: 457 KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVA 516
             ++VF+ +         LL  + + V +LHG   Q +R     +F   E   LL TDVA
Sbjct: 263 DHVMVFVQTKKQAHRLHILLGLLGIKVGELHGNLTQPQRLENLTKFKNEEIDILLATDVA 322

Query: 517 ARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQH-LRD 574
           ARGLDI  V  ++ +  P   + YIHRVGRTAR   GR G ++      E   ++  +++
Sbjct: 323 ARGLDISGVKTVINFVMPATMQHYIHRVGRTARA--GRVGVSVSLAGEQERSLVKEIIKN 380

Query: 575 AKVPLNEYEFPKEKLADIQTQLEKL 599
           AK P+     P + +     +L+ L
Sbjct: 381 AKNPVKNRIIPSDIIDKYYKKLQSL 405

gb|AAG56454.1| ATP-dependent RNA helicase [Escherichia coli O157:H7 EDL933]
dbj|BAB35350.1| ATP-dependent RNA helicase [Escherichia coli O157:H7]
pir||G90869 ATP-dependent RNA helicase [imported] - Escherichia coli  (strain O157:H7, substrain RIMD 0509952)
pir||B85749 ATP-dependent RNA helicase [imported] - Escherichia coli  (strain O157:H7, substrain EDL933)
ref|NP_309954.1| ATP-dependent RNA helicase [Escherichia coli O157:H7]
ref|NP_287840.1| ATP-dependent RNA helicase [Escherichia coli O157:H7 EDL933]
(457 aa)

Score: 198 bits (503), Expect: 6.35239e-49
Length: 359, Idn/Pos/Gap = 132/204/18 (36%/56%/5%)

Query: 212 FDSLPLSEPT-LRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           F +L +  P  L  + E+G+  MT +QA A+P  L+G+D+   A+TGSGKT AF + +++
Sbjct:   4 FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQ  63

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRTEAEKL 329
            +  + +     T A+++ PTRELA Q+ G L  LA     T+ + + GG     + + L
Sbjct:  64 QIDASLFQ----TQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSL 119

Query: 330 INGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
            +  +I+VATPGRLLDHLQ  +G V  + L  LV+DEADR L++GF + + +++R  P +
Sbjct: 120 QHAPHIIVATPGRLLDHLQ--KGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPAS 177

Query: 389 RQTMLFSATQTTKVEDLAKVS--FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           RQT+LFSAT     E +A +S   Q+ PL + ID+   +  +E   Q F    S+ +  L
Sbjct: 178 RQTLLFSATWP---EAIAAISGRVQRDPLAIEIDSTDALPPIE---QQFYETSSKGKIPL 231

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L  +Q    +VF ++    +   + LN +    L LHG  +Q  R  T   FA   
Sbjct: 232 LQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGS 291

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
              L+ TDVAARGLDI +++ +V ++   +P+ ++HR+GRTAR  +  G AI F  P E
Sbjct: 292 ARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNS-GLAISFCAPEE 349

dbj|BAB06103.1| ATP-dependent RNA helicase [Bacillus halodurans C-125]
ref|NP_243250.1| ATP-dependent RNA helicase [Bacillus halodurans C-125]
pir||H83947 ATP-dependent RNA helicase BH2384 [imported] - Bacillus halodurans (strain C-125)
(539 aa)

Score: 197 bits (502), Expect: 7.02136e-49
Length: 391, Idn/Pos/Gap = 125/209/14 (31%/53%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F+ L + E   + I EMGF   + IQA+AIP  L+G D++  A+TG+GKT AF IP+VE
Sbjct:   7 KFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVE  66

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            +   + +      A+I+ PTRELA+Q+ G +  L+ H       + GG +   + + L 
Sbjct:  67 KVSTGRHVQ-----ALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALK 121

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G  +++ TPGR++DHL+  +  + +H+  +++DEAD  L++GF +++  ILR +   RQ
Sbjct: 122 QGVQVVIGTPGRIIDHLRR-KTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQ 180

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    ++ L++  +   P  + I+  +   T   + Q +  V    +   L   
Sbjct: 181 TLLFSATMPPAIKKLSR-KYMNDPQTVSINRRE--VTAPSIDQFYYKVLERNKLDSLCRI 237

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +   Q    I+F  +  GV    E L         LHG   QS+R +   +F       L
Sbjct: 238 IDSEQIDLGILFCRTKKGVAELTEALQARGYIADGLHGDLTQSQRDAVMRKFRDSSIEFL 297

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARG+D+  V  ++ YD P +P+ Y+HR+GRT R    +G A+  + P E   ++
Sbjct: 298 IATDVAARGIDVGNVSHVINYDIPQDPESYVHRIGRTGRAGR-KGLALTLVTPRE---MK 353

Query: 571 HLRDAKVPLNEYEFPKEKLADIQTQLEKLVE 601
           HLR  +  + +   P +++  I+  +EK  E
Sbjct: 354 HLRSIEQEI-KMSIPSQEVPTIEDVVEKQKE 383

ref|YP_204822.1| putative ATP-dependent RNA helicase RhlE [Vibrio fischeri ES114]
gb|AAW85934.1| putative ATP-dependent RNA helicase RhlE [Vibrio fischeri ES114]
(421 aa)

Score: 197 bits (502), Expect: 7.25965e-49
Length: 349, Idn/Pos/Gap = 123/193/13 (35%/55%/3%)

Query: 209 PHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPI 268
           P  F  L L  P L  + E+ + + T IQA+AIP  L+GRD++A A TGSGKT  F +P+
Sbjct:   7 PANFTELGLISPLLARLTELEYQQPTPIQAQAIPSVLAGRDLIAGANTGSGKTATFALPL  66

Query: 269 VELLY-----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQT--RAIVMGGAN 321
           ++ +      KA+    N    +++ PTRELA Q+   +   A H +       V GG +
Sbjct:  67 LQQIAELQSGKAQASKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGAIKTVSVFGGVS 126

Query: 322 RRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEI 381
             T+   L  G +ILVATPGRLLD L S+     + ++ LV+DEADR L +GF EE++E+
Sbjct: 127 VNTQMLALRGGADILVATPGRLLD-LISSNAVKLDKVKTLVLDEADRMLSLGFTEELNEL 185

Query: 382 LRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSE 441
           L + PK +QT+LFSAT   +V+ L + +    P+ + + +      V   Q+ FT+   E
Sbjct: 186 LALAPKQKQTLLFSATFPEEVQTLTQ-ALLNNPVEIQLQSADASTVV---QRVFTVNKGE 241

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFE 501
           +   +L   +++NQ ++ ++F+++ N     A+ L    +     HG + Q  RT     
Sbjct: 242 KT-SVLAHLIQKNQWRQALIFVNAKNACNHLADKLAKRGIAAEVFHGDKGQGARTRVLEA 300

Query: 502 FARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           F   E   L+ TD+AARGLDI  +  ++ +D P  P +Y+HR+GR+ R 
Sbjct: 301 FKAGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPADYMHRIGRSGRA 349

ref|NP_968292.1| ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
emb|CAE79285.1| ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
(505 aa)

Score: 197 bits (502), Expect: 7.50603e-49
Length: 346, Idn/Pos/Gap = 123/195/13 (35%/56%/3%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           ++ + F +LPLS   L  ++E+GF  +T IQ  +IPL L+G+DI+  A+TGSGKT AF +
Sbjct:  44 VSQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSL 103

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRTE 325
           PI+  +   + + +    A+I+ PTRELA Q+   +  L       + + M GG + R +
Sbjct: 104 PILNKINLDQPLLQ----ALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQ 159

Query: 326 AEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
           A+ L NG  I+V TPGRL D +   R      ++ +V+DEAD+ L++GF +E+  ++R L
Sbjct: 160 ADALENGVQIVVGTPGRLADFVGRNR-IDLSAVKTVVLDEADKMLDMGFADEIKTVMRDL 218

Query: 386 PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGI-DAEQPVATVEGLQQGFTIVPSEQRF 444
           P +RQT+LFSAT    +E L++  +Q+    + I D EQ +     ++Q         + 
Sbjct: 219 PGSRQTVLFSATFPESIEHLSR-KYQRHAQQVIIEDEEQNL-----IEQLVYDSEDNDKT 272

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            +L   L+++     I+F ++ N V   AE LN +      LHG  +Q +R      F  
Sbjct: 273 NVLMRILQQHPSDSTIIFCNTKNAVAEIAERLNDLGAASGCLHGDMEQRERDRVMAMFRN 332

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             H  L+ TDVAARGLDI  ++ ++ +D P  P+ Y+HR+GRT R 
Sbjct: 333 GSHRILVATDVAARGLDIDNLELVINFDLPLSPEIYVHRIGRTGRA 378

emb|CAD85951.1| rhlE; ATP-dependent RNA helicase RhlE [Nitrosomonas europaea ATCC 19718]
ref|NP_842050.1| rhlE; ATP-dependent RNA helicase RhlE [Nitrosomonas europaea ATCC 19718]
(498 aa)

Score: 197 bits (502), Expect: 7.50603e-49
Length: 368, Idn/Pos/Gap = 126/202/15 (34%/54%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   L  + + G+   T IQA+ IP  L+G+D++ASA+TG+GKT  F +P   L
Sbjct:   7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLP---L  63

Query: 272 LYKAKWMP-------RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRT 324
           LY+ +          R+   A+I+APTRELAMQI   +     +     A+V GG N   
Sbjct:  64 LYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEP 123

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           +   L  G  ILVATPGRLLD L   +   F     LV+DEADR L++GF  ++  ++ +
Sbjct: 124 QIAALQAGVEILVATPGRLLD-LVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMAL 182

Query: 385 LPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRF 444
           L   RQ+++FSAT + ++  LA  S  ++P+   I+A       E +      V  + +F
Sbjct: 183 LSPQRQSLMFSATFSGEIRKLAD-SLLKQPVR--IEAAVQNTVNESISHVIHWVKPDSKF 239

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
            LL   +++   K+ ++F+ + +G    A++L+  ++  + +HG + Q +RT    EF  
Sbjct: 240 ALLLHLIRQQNLKQALIFVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFKH 299

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
            +   L+ TDVAARG+DI  +  ++ Y+ P  P++Y+HR+GRT R    +G+AI  +   
Sbjct: 300 GDVQILVATDVAARGIDIEKLSHVINYELPGNPEDYVHRIGRTGRA-GSKGKAISLVSEH 358

Query: 565 EVGFLQHL 572
           E   L ++
Sbjct: 359 EKELLANI 366

ref|ZP_00273275.1| COG0513: Superfamily II DNA and RNA helicases [Ralstonia metallidurans CH34]
(498 aa)

Score: 197 bits (502), Expect: 7.89136e-49
Length: 360, Idn/Pos/Gap = 129/203/13 (35%/56%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+S  L    LR + E G+ + T IQA+AIP+ L G+D++ +A+TG+GKT  F +PI++ 
Sbjct:  17 FESFGLDPRILRALTEQGYTKPTPIQAQAIPVVLLGKDVMGAAQTGTGKTAGFALPIIQR  76

Query: 272 LY---KAKWMP-RNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           L     A   P R+   A+++ PTRELA Q++  +   A H      +V GG +   + +
Sbjct:  77 LLPLANASASPARHPVRALMLTPTRELADQVYDNVARYAKHTDLRSTVVFGGVDMNPQTD 136

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
            L  G  ILVATPGRLLDH+Q  +      ++ LV+DEADR L++GF  ++  I+ +LP 
Sbjct: 137 ALRRGVEILVATPGRLLDHVQQ-KSVNLSQVQMLVLDEADRMLDMGFLPDLQRIINLLPA 195

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQT+LFSAT + +++ LA  S+ ++P+   I+  +  +T E ++Q    V    +   +
Sbjct: 196 QRQTLLFSATFSPEIKKLAS-SYLKQPV--TIEVARSNSTNENVRQVVYQVQDGHKQAAV 252

Query: 448 FTFLKR----NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
              LK+     Q ++ IVF++S  G    A  L    +    +HG + Q++R  T   F 
Sbjct: 253 VHLLKQRANEQQSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTERMQTLDGFK 312

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLP 563
                 L+ TDVAARGLDIPA+  ++ +D P   ++Y+HR+GRT R     G A+   +P
Sbjct: 313 NGTIDALVATDVAARGLDIPAMPCVINFDLPFSAEDYVHRIGRTGRA-GASGDALSIFVP 371

emb|CAE04571.1| OSJNBb0039L24.10 [Oryza sativa (japonica cultivar-group)]
ref|XP_473293.1| OSJNBb0039L24.10 [Oryza sativa (japonica cultivar-group)]
(498 aa)

Score: 197 bits (502), Expect: 8.36599e-49
Length: 343, Idn/Pos/Gap = 119/182/9 (34%/53%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI E GF R + IQ  +IP+AL+G DILA A+ G+GKT AF IP +
Sbjct: 124 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 183

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           E + + K    N    +I+ PTRELA+Q   V  +L  H      +  GG + + +  +L
Sbjct: 184 EKIDQDK----NAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRL 239

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               ++LV TPGR+LD L      V ++   LV+DEAD+ L   F+  + E++R LP  R
Sbjct: 240 YQPVHLLVGTPGRILD-LTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNR 298

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q ++FSAT    V++  K  +  KP  + +  E    T++G+ Q +  V   Q+   L T
Sbjct: 299 QILMFSATFPVTVKEF-KDKYLPKPYVINLMDE---LTLKGITQFYAFVEERQKVHCLNT 354

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
              + Q  + I+F +S N V+  A+ +  +      +H K  Q  R   F +F       
Sbjct: 355 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 414

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
           L+CTD+  RG+DI AV+ ++ +D P   + Y+HRVGR+ R  H
Sbjct: 415 LVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGH 457

emb|CAA09199.1| RNA helicase [Arabidopsis thaliana]
pir||T51741 RNA helicase RH8 [imported] - Arabidopsis thaliana
(505 aa)

Score: 197 bits (501), Expect: 8.64992e-49
Length: 343, Idn/Pos/Gap = 120/182/9 (34%/53%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI E GF R + IQ  +IP+AL+GRDILA A+ G+GKT AF IP++
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           E + +      N   A+II PTRELA+Q   V  +L  H      +  GG + + +  +L
Sbjct: 191 EKIDQ----DNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 246

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
               ++LV TPGR+LD L      V +    LV+DEAD+ L   F+  +  ++  LP++R
Sbjct: 247 YQPVHLLVGTPGRILD-LTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESR 305

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q ++FSAT    V+D  K  F   P  + +  E    T++G+ Q +  V   Q+   L T
Sbjct: 306 QILMFSATFPVTVKDF-KDRFLTNPYVINLMDE---LTLKGITQFYAFVEERQKIHCLNT 361

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
              + Q  + I+F +S N V+  A+ +  +      +H K  Q  R   F +F       
Sbjct: 362 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCSYIHAKMLQDHRNRVFHDFRNGACRN 421

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
           L+CTD+  RG+DI AV+ ++ +D P   + Y+HRVGR+ R  H
Sbjct: 422 LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGH 464

ref|ZP_00052190.1| COG0513: Superfamily II DNA and RNA helicases [Magnetospirillum magnetotacticum MS-1]
(551 aa)

Score: 197 bits (501), Expect: 9.72172e-49
Length: 374, Idn/Pos/Gap = 130/200/11 (34%/53%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F    L+EP LR + E G+   T IQ +A+P A+ GRD+   A+TG+GKT AF +PI+ 
Sbjct:  41 QFTDFGLAEPILRALGEAGYVSPTPIQTQALPPAMEGRDLCGIAQTGTGKTAAFALPILH 100

Query: 271 LL-YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
            L  + +  PR G   ++++PTRELA QI     D   H   T  +V GG N   +   +
Sbjct: 101 RLSLENRRAPRRGCRVLVLSPTRELASQIAESFSDYGRHLPYTSTVVFGGVNISRQERAI 160

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G +ILVATPGRL+D L   R    E +  LV+DEAD+ L++GF   +  I+++LP  R
Sbjct: 161 APGVDILVATPGRLID-LVDRRALTLEGVEILVLDEADQMLDLGFIHALKRIVKMLPARR 219

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATV-EGLQQGFTIVPSEQRFRLLF 448
           Q++ FSAT    +  LA   +   P+ + +    PVAT  E + Q      +  +  LL 
Sbjct: 220 QSLFFSATMPKNIAGLAD-QYLSNPVQVAV---TPVATTAERVDQQVIFCHTGAKQALLN 275

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
             L+  + ++++VF  + +G       L+ + +    +HG + Q +R      F      
Sbjct: 276 HVLRDPKIERVLVFTRTKHGADRVVRGLDKVGIVGAAIHGNKSQPQRERALAAFRDGSCR 335

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L+ TD+AARG+D+  V  +V YD P+ P+ Y+HR+GRTAR     G+AI F    E  +
Sbjct: 336 VLVATDIAARGIDVEGVTHVVNYDLPNVPESYVHRIGRTARA-GAEGQAISFCNDEERAY 394

Query: 569 LQHLRDA---KVPL 579
           L+ +      KVP+
Sbjct: 395 LRDIERTTRQKVPV 408

ref|NP_415859.1| ATP-dependent RNA helicase [Escherichia coli K12]
gb|AAC74425.1| ATP-dependent RNA helicase; ATP-dependent RNA helicase, stimulated by 23S rRNA [Escherichia coli K12]
pir||B64884 ATP-dependent RNA helicase dbpA - Escherichia coli (strain K-12)
sp|P21693|DBPA_ECOLI ATP-independent RNA helicase dbpA
dbj|BAA14946.1| ATP-dependent RNA helicase DbpA. [Escherichia coli]
(457 aa)

Score: 197 bits (500), Expect: 1.14872e-48
Length: 359, Idn/Pos/Gap = 132/204/18 (36%/56%/5%)

Query: 212 FDSLPLSEPT-LRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           F +L +  P  L  + E+G+  MT +QA A+P  L+G+D+   A+TGSGKT AF + +++
Sbjct:   4 FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQ  63

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRTEAEKL 329
            +  + +     T A+++ PTRELA Q+ G L  LA     T+ + + GG     + + L
Sbjct:  64 QIDASLFQ----TQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSL 119

Query: 330 INGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
            +  +I+VATPGRLLDHLQ  +G V  + L  LV+DEADR L++GF + + +++R  P +
Sbjct: 120 QHAPHIIVATPGRLLDHLQ--KGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPAS 177

Query: 389 RQTMLFSATQTTKVEDLAKVS--FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           RQT+LFSAT     E +A +S   Q+ PL + ID+   +  +E   Q F    S+ +  L
Sbjct: 178 RQTLLFSATWP---EAIAAISGRVQRDPLAIEIDSTDALPPIE---QQFYETSSKGKIPL 231

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L  +Q    +VF ++    +   + LN +    L LHG  +Q  R  T   FA   
Sbjct: 232 LQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGS 291

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
              L+ TDVAARGLDI +++ +V ++   +P+ ++HR+GRTAR  +  G AI F  P E
Sbjct: 292 ARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNS-GLAISFCAPEE 349

ref|NP_967240.1| ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
emb|CAE77894.1| ATP-dependent RNA helicase [Bdellovibrio bacteriovorus HD100]
(505 aa)

Score: 197 bits (500), Expect: 1.15835e-48
Length: 366, Idn/Pos/Gap = 124/195/10 (33%/53%/2%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           +T  +F  LPL  P    ++E G+   T IQ  AIP+ L G D+L  A+TG+GKT AF +
Sbjct:   1 MTTTKFTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSL  60

Query: 267 PIVELLYK-AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTE 325
           PI++ L K  + +       +I+ PTRELA+QI   +   + H +   A++ GG  +  +
Sbjct:  61 PILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQ 120

Query: 326 AEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
              L  G +IL+ATPGRL+D L   +    + +   V+DEADR L++GF +++ +IL +L
Sbjct: 121 VRALQGGVDILIATPGRLMD-LHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLL 179

Query: 386 PKTRQTMLFSATQTTKVEDLA-KVSFQQKPLHLGIDAEQPVA-TVEGLQQGFTIVPSEQR 443
           P+ R  + FSAT   +++ LA ++    K + +      PV+ T E ++Q    V   Q+
Sbjct: 180 PQKRHNLFFSATMPHEIQTLANRILVNPKKVEV-----TPVSSTAEKVEQRVMFVDKPQK 234

Query: 444 FRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFA 503
             LL   LK     K++VF+    G     + L    V    +HG + Q++R     EF 
Sbjct: 235 LDLLLHILKDESLSKVLVFVQMKYGANRVVDRLTKAGVAAAGIHGDKSQNQRQRALEEFK 294

Query: 504 RREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLP 563
             +   L+ TD+AARG+DI  +  ++  + P  P+ Y+HR+GRTAR     G +I F   
Sbjct: 295 NGDVRVLVATDIAARGIDIDGITHVINLELPHIPESYVHRIGRTARA-GATGISISFCTA 353

Query: 564 SEVGFL 569
            E  FL
Sbjct: 354 EERSFL 359

gb|EAA20096.1| DEAD/DEAH box helicase, putative [Plasmodium yoelii yoelii]
(487 aa)

Score: 197 bits (500), Expect: 1.19766e-48
Length: 381, Idn/Pos/Gap = 122/196/29 (32%/51%/7%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE- 270
           +  L +S+P L+ + E+ F   T IQ   IPLAL G+ ILA++ TGSGKTLAF++P++E 
Sbjct:  46 WSDLHISKPLLKVLYELKFENPTYIQKDVIPLALEGKSILANSETGSGKTLAFVLPMLER 105

Query: 271 LLYKAKWMPRNG-------TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
           LLY      R         T A+++ PTRELAMQ + V+++L  +   T ++  GG + +
Sbjct: 106 LLYSPNIKLRRENRKSICITKALVLLPTRELAMQCYEVINNLIKYSPITCSLFCGGIDSK 165

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
            +  +     +I V TPGR+LD L ++       L  ++ DEAD+ LE+GF+EE  +IL 
Sbjct: 166 EQENEYKKKKDIFVCTPGRILDLLLNSSNDFINFLEIVIFDEADKLLELGFKEECLKILD 225

Query: 384 ILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAE------------------QPV 425
           +    +Q + FSAT    +++LA  S +  P+ +  + +                  +  
Sbjct: 226 VCKFKKQILFFSATLXKDIKELANFSLRN-PIFIQSENKNKDNKSKENINTQINKNFKSF 284

Query: 426 ATVEGLQQGF-TIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVL 484
              E L Q F  I+  + R   L        +K  I+F  +         LL  ++    
Sbjct: 285 KISENLHQEFLNIINEKYRKATLLHLCNEVYKKNCIIFFKTRKETHLMYILLKLLNFKCE 344

Query: 485 DLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRV 544
           +LHG   Q KR  +  +F  ++   LLCT++A+RG+DI  + +++ Y  P    +Y+HR+
Sbjct: 345 ELHGLLTQKKRVESILKFKNQQVDFLLCTELASRGIDIDHIKYVINYSLPANVVKYVHRI 404

Query: 545 GRTARGVHGRGRAILFLLPSE 565
           GRTAR +   G +  F LP E
Sbjct: 405 GRTAR-IGKEGTSCTFFLPKE 424

ref|ZP_00310566.1| COG0513: Superfamily II DNA and RNA helicases [Cytophaga hutchinsonii]
(413 aa)

Score: 197 bits (500), Expect: 1.19766e-48
Length: 355, Idn/Pos/Gap = 116/193/15 (32%/54%/4%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F+S  L+    + + E GF R T+IQ ++IP  L+G D+LA A+TG+GKT AF+IP++ 
Sbjct:   2 KFESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLN  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            L   K         +++APTRELA+QI  V   + ++       + GG  +  +     
Sbjct:  62 TLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAAD 121

Query: 331 NGTNILVATPGRLLD-----HLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
            G +ILVATPGR+ D     H++ TR      ++ LV+DEAD  L++GF +++ ++ + L
Sbjct: 122 YGIDILVATPGRMFDLIYQKHIKITR------VKILVLDEADHMLDLGFIKDIQDVKKFL 175

Query: 386 PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR 445
           P   QT+ FSAT   +++ LA  S  + P+ + I  +  V+  + +      +  + +  
Sbjct: 176 PARHQTLFFSATINEEIKKLA-YSLVKNPIRIQIAPKDRVS--KNITHSVAFIGMDDKRF 232

Query: 446 LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARR 505
            L   LK +   K+IVF+ +          +  + +  + +HG ++Q  R +    F   
Sbjct: 233 FLERLLKEHPESKVIVFVRTQVRADRVQAAMERVGLKSVTMHGGKEQQARDAAMDAFKNG 292

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILF 560
               L+ TD++ARG+DI  V+++V YD P+  + Y+HRVGRT RGV  +G AI F
Sbjct: 293 TVHVLIATDISARGIDIAGVEYVVNYDMPEVAENYVHRVGRTGRGV-SKGFAISF 346

ref|ZP_00270322.1| COG0513: Superfamily II DNA and RNA helicases [Rhodospirillum rubrum]
(799 aa)

Score: 197 bits (500), Expect: 1.2077e-48
Length: 368, Idn/Pos/Gap = 134/206/16 (36%/55%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS  TLR IEE+G+   T IQ +AIP    GRD+L  A+TG+GKT +F +P++++
Sbjct:   3 FADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMIDI  62

Query: 272 LYKAKW---MPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEK 328
           L   K    MPR    ++I+APTRELA Q+         +   + A+++GG +   + + 
Sbjct:  63 LASGKAKARMPR----SLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQKV 118

Query: 329 LINGTNILVATPGRLLDHLQSTRG-FVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           L  G ++L+ATPGRL+D  +  RG  +   ++ LVIDEADR L++GF  ++  I+ +LPK
Sbjct: 119 LDRGVDVLIATPGRLIDLFE--RGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPK 176

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQT+ FSAT   ++  LA  +F   P  + I+  Q VA  E ++Q   +V + ++   L
Sbjct: 177 IRQTLFFSATMDKEIRRLAD-AFLMNPKEVRIEPTQKVA--ETVEQALIMVKASEKREAL 233

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L+R       +F +    V    + L+     +L LHG   Q  RT    +F R E 
Sbjct: 234 RQLLRRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEV 293

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEV 566
             ++C+DVAARG+D+  V  +  +D P  P++YIHR+GRT R   GR GRA     P + 
Sbjct: 294 QLMVCSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRA--GRLGRAYTLATPEDA 351

Query: 567 GFLQHLRD 574
            +L+ + +
Sbjct: 352 KYLRAIEN 359

ref|YP_099580.1| ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
emb|CAH08086.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
ref|YP_212012.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
dbj|BAD49046.1| ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
(418 aa)

Score: 197 bits (500), Expect: 1.23831e-48
Length: 359, Idn/Pos/Gap = 117/201/12 (32%/55%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L++  L  ++ M F   T IQ +AIP+ L GRD++A A+TG+GKT AFL+PI+ 
Sbjct:   2 KFSELQLNDNVLEALDAMRFEECTPIQEQAIPVILEGRDLIAVAQTGTGKTAAFLLPILN  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR---RTEAE 327
            L +    P +    +I++PTRELA QI   +   +     +   V GG +      + +
Sbjct:  62 KLSEGG-HPEDAINCVIMSPTRELAQQIDQQMEGFSYFMPVSSVAVYGGNDGILFEQQKK 120

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            L+ G ++++ATPGRL+ HL  + G+V    + + ++DEADR L++GF E++ +I++ LP
Sbjct: 121 GLMLGADVVIATPGRLIAHL--SLGYVDLSRVSYFILDEADRMLDMGFYEDIMQIVKYLP 178

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K RQT++FSAT   K++ LA  +    P  + +   +P    E + Q   +    Q+  +
Sbjct: 179 KERQTIMFSATMPAKIQQLAN-TILNNPAEVKLAVSKPA---EKIVQAAYVCYENQKLGI 234

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           + +       +++I+F SS   VK  A+ L  + + V ++H   +Q +R     EF    
Sbjct: 235 VRSLFAEEVPERVIIFASSKIKVKEVAKALKMMKLNVGEMHSDLEQVQREFIMHEFKSGR 294

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
              L+ TD+ +RG+DI  +  ++ +D P + ++Y+HR+GRTAR  +  G A+ F+   E
Sbjct: 295 INILVATDIVSRGIDIDDIRLVINFDVPHDSEDYVHRIGRTARA-NNDGVALTFVNEKE 352

ref|ZP_00215723.1| COG0513: Superfamily II DNA and RNA helicases [Burkholderia cepacia R18194]
(477 aa)

Score: 197 bits (500), Expect: 1.2697e-48
Length: 380, Idn/Pos/Gap = 128/206/12 (33%/54%/3%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL---Y 273
           ++EP ++ + E+G+   T IQ +AIP  L G D+LA A+TG+GKT  F +PI++ L   Y
Sbjct:   1 MAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPILQRLHTFY  60

Query: 274 KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGT 333
                 +    A+I+ PTRELA Q+   +   + +      ++ GG +   + + L  G 
Sbjct:  61 ADNRGAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQIDALKRGV 120

Query: 334 NILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTML 393
           +I+VATPGRLLDH+Q  +     +L  LV+DEADR L++GF  ++  +L  LP  RQ +L
Sbjct: 121 DIVVATPGRLLDHMQQ-KTIDLSNLDILVLDEADRMLDMGFIHDIKRVLAKLPPQRQNLL 179

Query: 394 FSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR 453
           FSAT + +++ LA        L   I+  +   T E + Q    V  +++  LL   ++ 
Sbjct: 180 FSATFSDEIKALADSLLDSPAL---IEVARRNTTAESVAQKIHPVDRDRKRELLTHLIRE 236

Query: 454 NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCT 513
           +   +++VF  + +G    AE L    +  + +HG + QS RT    EF       L+ T
Sbjct: 237 HNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVLVAT 296

Query: 514 DVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHLR 573
           D+AARG+DI  +  +V +D P+ P++Y+HR+GRT R     G A+  +   E    Q LR
Sbjct: 297 DIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRA-GATGEAVSLVCVDEK---QLLR 352

Query: 574 DAKVPLNEYEFPKEKLADIQ 593
           D +  L + E P+E +A  +
Sbjct: 353 DIE-RLIKREIPQEVIAGFE 371

ref|ZP_00239273.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus G9241]
gb|EAL13168.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus G9241]
(481 aa)

Score: 197 bits (500), Expect: 1.31279e-48
Length: 366, Idn/Pos/Gap = 121/194/9 (33%/53%/2%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           ++   F +  LS+   R +  +G+   TE+Q   IP+AL  +D++  ++TGSGKT +F I
Sbjct:   1 MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI  60

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           P+ E++   +W   N   A+++ PTRELA+Q+   + ++        A + G +    + 
Sbjct:  61 PLCEMV---EW-EENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQK 116

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            +L   T+I+V TPGR+LDH++       E L++LVIDEAD  L +GF +++  I+  LP
Sbjct: 117 LELKQKTHIVVGTPGRVLDHIEKGT-LSLERLKYLVIDEADEMLNMGFIDQVEAIIDELP 175

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
             R TMLFSAT    VE L++ ++   P H+ I A     T + ++     V  E++  L
Sbjct: 176 TKRMTMLFSATLPEDVERLSR-TYMNAPTHIEIKAAG--ITTDKIEHTLFEVREEEKLSL 232

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L            I+F  +   V      LN ++ P   +HG   Q  R     +F + +
Sbjct: 233 LKDVTTIENPDSCIIFCRTQENVDHVYRQLNRVNYPCDKIHGGMVQEDRFGVMNDFRKGK 292

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TDVAARG+DI  +  ++ YD P E + Y+HR GRT R  +  G+AI F+ P E 
Sbjct: 293 FRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNS-GKAITFITPYEE 351

Query: 567 GFLQHL 572
            FL+ +
Sbjct: 352 RFLEEI 357

ref|NP_718157.1| ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
gb|AAN55601.1| ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
(475 aa)

Score: 197 bits (500), Expect: 1.38018e-48
Length: 350, Idn/Pos/Gap = 119/199/5 (34%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L    ++ + E+G+   T IQ +AIP  L+G+++LA+A+TG+GKT +F++P++  
Sbjct:   3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
              A  +      +II+ PTRELA+Q+   ++  A +   T   + GG +   + ++LI 
Sbjct:  63 FADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
           G ++LVATPGRLLD + + R   F+ +  LV+DEADR L++GF E+++ I+  LP+ RQ 
Sbjct: 123 GVDLLVATPGRLLD-MYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQN 181

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT + +V+ LAK +    P  + I+  +  A    + Q  T V  +++  LL   +
Sbjct: 182 LLFSATLSKQVKALAKTAI---PDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHLI 238

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           K N   + ++F+ + +G       L    +     H  + Q+ R     +F   +   L+
Sbjct: 239 KENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLV 298

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFL 561
            T V +RG+DI A++ ++ YD PDE  +YIHR+GRT R    +G AI F+
Sbjct: 299 ATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRA-GNQGEAISFV 347

ref|NP_814588.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus faecalis V583]
gb|AAO80658.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Enterococcus faecalis V583]
(536 aa)

Score: 197 bits (500), Expect: 1.39175e-48
Length: 392, Idn/Pos/Gap = 140/207/11 (35%/52%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L+   L  +E  GF   T IQ+  IPLAL+G+D++  A+TG+GKT AF +P   
Sbjct:  23 KFKELGLAPELLSAVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLP---  79

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           +L K     R   G ++IAPTRELA+Q    L  L          V GGA+   +   L 
Sbjct:  80 MLNKIDADNRVIQG-LVIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGLK 138

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +  +I+V TPGRLLDH+ + R    E +  LV+DEAD  L +GF E++ +I+  +P+ RQ
Sbjct: 139 DRPHIVVGTPGRLLDHI-NRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQRQ 197

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    ++++  V F ++P H+ I A++   T + + Q +      ++F ++   
Sbjct: 198 TLLFSATMPPAIKNIG-VKFMKQPEHVKIKAKE--MTADLIDQYYVRSKDFEKFDIMTRL 254

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     +  IVF  +   V   A  L         +HG   Q KR S    F       L
Sbjct: 255 LDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKNGNLDIL 314

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLDI  V  +  YD P +P+ Y+HR+GRT R   G G ++ F+ P+E+G+L 
Sbjct: 315 VATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKG-GMSVTFVTPNEMGYLH 373

Query: 571 HLRD-AKVPLNEYEFPKEKLADIQTQLEKLVE 601
            + +  K  +     P EK A  + QL   VE
Sbjct: 374 VIENLTKKRMTPLRPPTEKEA-FKGQLSAAVE 404

ref|YP_050896.1| putative ATP-dependent RNA helicase [Erwinia carotovora subsp. atroseptica SCRI1043]
emb|CAG75705.1| putative ATP-dependent RNA helicase [Erwinia carotovora subsp. atroseptica SCRI1043]
(483 aa)

Score: 196 bits (499), Expect: 1.46319e-48
Length: 343, Idn/Pos/Gap = 126/188/8 (36%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FDSL LS   LR IEE G+   T +Q +AIP+ L GRD++ASA+TG+GKT  F +P+++L
Sbjct:   3 FDSLGLSADILRAIEEQGYRDPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLLQL  62

Query: 272 LY----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           L     + K   R    A+I+ PTRELA QI   +   + +      +V GG +   +  
Sbjct:  63 LTSREAQNKGKGRRPVRALILTPTRELAAQIDENVKAYSKYLPLRSLVVFGGVSINPQMM 122

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           KL  G +ILVATPGRLLD L+  R      +  LV+DEADR L++GF  ++  +L  LP 
Sbjct: 123 KLRGGVDILVATPGRLLD-LEHQRAVDLSQIEILVLDEADRMLDMGFIHDIRRVLAKLPA 181

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQ +LFSAT + +++ LA            ++  +  +  E + Q    V   ++  LL
Sbjct: 182 KRQNLLFSATFSDEIKALANKLLTNPA---SVEVVRRNSPSELVTQNVHFVDKRRKRELL 238

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              +  N  ++++VF  + +G    AELL    +    +HG + Q  RT     F     
Sbjct: 239 SQLIGENNWQQVLVFTRTKHGANHLAELLEKDGITAAAIHGNKSQGARTRALANFKDGGI 298

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
             L+ TD+AARGLDI  +  +V Y+ P+ P++Y+HR+GRT R 
Sbjct: 299 RVLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRA 341

emb|CAG09056.1| unnamed protein product [Tetraodon nigroviridis]
(482 aa)

Score: 196 bits (499), Expect: 1.47545e-48
Length: 344, Idn/Pos/Gap = 118/189/10 (34%/54%/2%)

Query: 210 HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIV 269
           + F+   L    L GI EMG+ + + IQ  +IP+ALSGRDILA A+ G+GK+ A+LIP++
Sbjct:  95 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL 154

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEK 328
           E +     + R+   A++I PTRELA+Q+  +   ++ H    + +   GG N R +  +
Sbjct: 155 ERID----LKRDCIQALVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMR 210

Query: 329 LINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
           L    ++++ATPGR+LD ++     V   ++ +V+DEAD+ L   F   M EIL  L K 
Sbjct: 211 LDETVHVVIATPGRILDLIKKGVAKV-SQVQMIVLDEADKLLSQDFVGMMEEILGFLSKQ 269

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ +L+SAT    V+     S  QKP  + +  E    T++G+ Q +  V   Q+   L 
Sbjct: 270 RQILLYSATFPLSVQKFM-TSHLQKPYEINLMEE---LTLKGVTQYYAYVTERQKVHCLN 325

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           T   R Q  + I+F +S   V+  A+ ++ +      +H K +Q  R   F +F      
Sbjct: 326 TLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 385

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVH 552
            L+CTD+  RG+DI AV+ ++ +D P   + Y+HR+GR+ R  H
Sbjct: 386 NLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGH 429

ref|ZP_00152150.2| COG0513: Superfamily II DNA and RNA helicases [Dechloromonas aromatica RCB]
(447 aa)

Score: 196 bits (499), Expect: 1.50028e-48
Length: 361, Idn/Pos/Gap = 127/204/10 (35%/56%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL L+ P L+ +E +G+   T IQA+AIP  L+GRD++A+A+TG+GKT  F +PI++ 
Sbjct:   3 FSSLGLAAPLLQALETLGYETPTPIQAQAIPAVLAGRDLMAAAQTGTGKTAGFALPILQR  62

Query: 272 LYKAK-WMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L +++  +  N    +++ PTRELA Q+         H   +     GG +   +  +L 
Sbjct:  63 LSESEDKVASNSIRVLVLVPTRELAEQVHASFRQYGEHLAVSTYAAYGGVSINPQMMRLR 122

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++LVATPGRL+D L +     F+ ++ LV+DEADR L++GF  E+  +   LP+ RQ
Sbjct: 123 RGVDVLVATPGRLID-LFTQNAIKFKQVQTLVLDEADRMLDLGFAHELDTLFAALPRKRQ 181

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL-LFT 449
           T+LFSAT + ++  LAK   +     L I+     +TV+ ++Q   +VP +++ +  LF 
Sbjct: 182 TLLFSATFSDEIRSLAKGRLRDP---LSIEVAPRNSTVKAIKQ--WVVPVDKKRKTELFL 236

Query: 450 FLKRNQR-KKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           F++++++  +++VF+ +  GV      L    +    +HG + Q  R      F   E  
Sbjct: 237 FMRKDRKWGQVLVFVKTRRGVDELVATLLAKKIKADAIHGDKPQPARLRALESFKAGEVQ 296

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGF 568
            L+ TDVAARGLDI  +  +V YD P   ++YIHR+GRT R     G+AI  +   E   
Sbjct: 297 ILVATDVAARGLDIDDLPQVVNYDLPIVAEDYIHRIGRTGRA-GATGQAISLVCADEAPL 355

Query: 569 L 569
           L
Sbjct: 356 L 356

ref|NP_718686.1| ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
gb|AAN56130.1| ATP-dependent RNA helicase, DEAD box family [Shewanella oneidensis MR-1]
(427 aa)

Score: 196 bits (499), Expect: 1.52553e-48
Length: 343, Idn/Pos/Gap = 126/188/10 (36%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L +  P    + E+G+   T +QA  IP  LSGRD+LA A TGSGKT AF +P+++ 
Sbjct:  11 FAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQR  70

Query: 272 LYKAKWMPRNG--TGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIV--MGGANRRTEAE 327
           L +AK   ++      +++ PTRELA Q+       ASH +    IV   GG +   + +
Sbjct:  71 LSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQ 130

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
            L  G ++LVATPGRLLD L S        +   V+DEADR L +GF EE+ ++L  LP+
Sbjct: 131 SLRAGADVLVATPGRLLDLLASN-ALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALPR 189

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            +QT+LFSAT   +V  L      Q PL   + +EQ  +T+E   Q    V  EQ+  LL
Sbjct: 190 QKQTLLFSATFPEEVRALTTKLLHQ-PLEYHLQSEQE-STIE---QRVITVNREQKTALL 244

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              +K++Q  + ++F+S+ N     A+ L+   +     HG + Q  RT     F   E 
Sbjct: 245 AHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEI 304

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           + L+ TD+AARG+DI  +  ++ +D P  P +Y+HR+GR+ R 
Sbjct: 305 SVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRA 347

gb|EAL60848.1| putative RNA helicase [Dictyostelium discoideum]
(1091 aa)

Score: 196 bits (499), Expect: 1.53831e-48
Length: 410, Idn/Pos/Gap = 135/214/38 (32%/52%/9%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F S+ L++  L+ I + GF   T IQ ++IP+ L G DI+  ARTGSGKT AF+IP+++ 
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L         G  A+I++PTRELA+Q F V+ D +        +++GG +   +   L  
Sbjct: 292 L--GDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLAR 349

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I++ATPGRL+ HL  T G     ++++V DEADR  E+GF E++ EIL  L + RQT
Sbjct: 350 NPDIIIATPGRLMHHLLET-GMSLSKVQYIVFDEADRLFEMGFNEQLTEILSKLSENRQT 408

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT  + + D  +      P  + +D +  ++  E L   F  +  E++  +L   L
Sbjct: 409 LLFSATLPSLLVDFVRAGLNN-PKLINLDTDTKIS--ENLSLSFFTLRHEEKLGVLLFLL 465

Query: 452 K-------------------------RNQRKK--IIVFMSSCNGVKFYAELLNYIDVPVL 484
           K                         + Q+KK   I+F+S+   V+F   LL    +   
Sbjct: 466 KDIIYKKPQLPTTETTTTTTTNNESNQQQQKKSSTIIFVSTKYHVEFIHILLERAGIAST 525

Query: 485 DLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRV 544
            +HG      R     +F   +   ++ TD+AARG+DIP +D ++ +D P + K +IHRV
Sbjct: 526 YIHGYLDPVARKINLAKFRSHQVGVMVVTDLAARGIDIPLLDNVINFDFPPKEKIFIHRV 585

Query: 545 GRTARGVHGR-GRAILFLLPSEVGFL--QHLRDAKVPLNEYEFPKEKLAD 591
           GR AR   GR G A   + P EV ++   HL   +  LN++++  + + D
Sbjct: 586 GRVARA--GRSGIAYSLVSPDEVPYMIDLHLYLGRKFLNKFQYEGQTIND 633

emb|CAD25763.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi GB-M1]
ref|NP_586159.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi GB-M1]
(400 aa)

Score: 196 bits (499), Expect: 1.53831e-48
Length: 392, Idn/Pos/Gap = 130/210/12 (33%/53%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L + E  ++  +E G  R TE+Q + IP  L G D++A ++TGSGKTLAF++PIV  
Sbjct:   3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +           +++APTREL+ QI    +   +   +   +++GGAN   +A +L  
Sbjct:  63 LLQKN----RSFYCLVVAPTRELSSQIAECFNMFQATGLRV-CLLVGGANFNVQANQLSK 117

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +++V TPGR+ +H+  T+ F  E +R  V+DEADR  E  F E++  I+  L + RQT
Sbjct: 118 RPHVVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQDFVEDLETIIPSLREKRQT 177

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LF+AT + ++  L+  S  ++P    I   +   TV  L++ +  V  + +   L   L
Sbjct: 178 LLFTATMSDEISKLSS-SILKRP--KTIRTAEKYETVPALKEYYLFVAMKWKNSALVELL 234

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
           + +Q   +IVF+S C   +  +  L  +      LHG+  Q KR      F       L+
Sbjct: 235 EMSQGMSVIVFVSMCVTARVMSLALARLGFCSEALHGELSQEKREEAMRSFKESRFNVLV 294

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQ 570
           CTD+ +RGLDI  VD ++ +D P   K+YIHRVGRTAR   GR G AI  +   +V  +Q
Sbjct: 295 CTDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGRTARA--GRSGTAITLVTQYDVEQIQ 352

Query: 571 HLR-DAKVPLNEYEFPKEKLADIQTQLEKLVE 601
            +    +  L E++  K+    I  ++E+ ++
Sbjct: 353 KIEFTLEKKLEEFKMMKKNFGTICARIEEAIQ 384

gb|AAO15914.1| vasa-like [Schistocerca gregaria]
(588 aa)

Score: 196 bits (499), Expect: 1.5642e-48
Length: 357, Idn/Pos/Gap = 132/196/16 (36%/54%/4%)

Query: 217 LSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE-LLYKA 275
           L E  L+ +++ G+ + T +Q  AIP+   GRD++A A+TGSGKT AFL+PI+  +L   
Sbjct: 174 LREFVLQNVKKCGYTKPTPVQKYAIPIIAGGRDLMACAQTGSGKTAAFLLPIINTILNDP 233

Query: 276 KWMPRNGTG----AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           + +   G G    A+I++PTRELA+QIF      A        +V GG +   +A+++  
Sbjct: 234 RELVMTGQGCEPHAVILSPTRELALQIFNEARKFALGSIVKSVVVYGGTSTMHQAQQVAR 293

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILR---ILPK 387
           G +ILVATPGRL+D L   RG V F+ +RF+V+DEADR L++GF  ++ ++L    ++P 
Sbjct: 294 GCHILVATPGRLMDFLN--RGRVNFQSVRFVVLDEADRMLDMGFLPDVEKMLEHPTMVPT 351

Query: 388 -TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
             RQT++ SAT   +++ LA   F    L L +           ++Q F  V    +   
Sbjct: 352 GERQTVMVSATFPEEIQRLA-TKFLSNYLFLAVGIVG--GACSDVEQIFYKVSKFDKRAK 408

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L+    KK++VF+ +     F A  L     P   +HG + QS+R    ++F    
Sbjct: 409 LTEILREEGGKKVLVFVETKRIADFLAAFLCEQKFPTTSIHGDRLQSQREEALYDFKSGR 468

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLP 563
              L+ T VAARGLDI  V  ++ YD P    EY+HR+GRT R V  RGRA  F  P
Sbjct: 469 MGILVATAVAARGLDIKNVAHVINYDLPKSIDEYVHRIGRTGR-VGNRGRATSFYDP 524

emb|CAG61490.1| unnamed protein product [Candida glabrata CBS138]
ref|XP_448529.1| unnamed protein product [Candida glabrata]
(816 aa)

Score: 196 bits (499), Expect: 1.5773e-48
Length: 414, Idn/Pos/Gap = 136/223/22 (32%/53%/5%)

Query: 200 PKPSSGLLTPHRFDSLPLSEPTLRGIEEM-GFARMTEIQARAIPLALSGRDILASARTGS 258
           P+P +      ++  L +    +R I+++  +  +T IQ + IP  +SGRD++  ++TGS
Sbjct: 247 PRPVT------KWSQLGIPYDIIRFIKDVFSYKSLTPIQTQTIPAIMSGRDVIGISKTGS 300

Query: 259 GKTLAFLIPIVELLYKAKWMPRNG-TG--AIIIAPTRELAMQIFGVLHDLASHHHQTRAI 315
           GKT+++L+P++  + KA+   RNG TG  A+I APTRELA+QI   +  L S    +   
Sbjct: 301 GKTISYLLPMIRHV-KAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLISDLDISSIC 359

Query: 316 VMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLR--FLVIDEADRCLEIG 373
             GG++ + + +KL  G  I +ATPGR +D L    G +   LR  F+V+DEADR  + G
Sbjct: 360 CTGGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLRISFVVMDEADRLFDFG 419

Query: 374 FEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQ 433
           FE ++  +LR +   RQ +LFSAT  +KV + A   F   PL + ++AE  V   E + Q
Sbjct: 420 FEPQIASVLRTVRPDRQCVLFSATFPSKVSNFAS-RFLDSPLQITVNAEGMVN--ERINQ 476

Query: 434 GFTIVPSEQ-RFRLLFTFLK----RNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHG 488
            FTI   E  +F+ L + LK        +K I+F+SS        + L      +  +H 
Sbjct: 477 KFTICSDESDKFKELLSLLKVFNSETVDEKTIIFVSSQQICDIIEKRLTDYSEKLYSIHA 536

Query: 489 KQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTA 548
            +  ++R      F +  ++ LLCT+V +RGL++P V  ++ Y+      +Y+H  GRTA
Sbjct: 537 GRPYNERRQNLELFKKTSNSILLCTEVMSRGLNVPEVSRVILYNSAKTFAQYVHSTGRTA 596

Query: 549 RGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFPKEKLADIQTQLEKLVEG 602
           RG    G +I  LLP+E+     L  A    +  E P +++ +++   +K  +G
Sbjct: 597 RGTR-EGTSISLLLPNELSSAYILNKAMRDKDFSECPVKEVKNLKQMAQKFEDG 649

ref|YP_024123.1| ATP-dependent RNA helicase [Picrophilus torridus DSM 9790]
gb|AAT43930.1| ATP-dependent RNA helicase [Picrophilus torridus DSM 9790]
(387 aa)

Score: 196 bits (499), Expect: 1.59052e-48
Length: 326, Idn/Pos/Gap = 112/184/12 (34%/56%/3%)

Query: 225 IEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTG 284
           ++ MGF   TE+Q  AIP  LSGRD++  + TGSGKT AFLIP ++    +K+       
Sbjct:  19 LDRMGFYEPTEVQGLAIPEILSGRDVVIKSMTGSGKTAAFLIPAIQRALGSKFF----NT  74

Query: 285 AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLL 344
            +II PTRELA+Q + V  +++ +  +T  +V GG++   +   L + + I++ TPGR++
Sbjct:  75 VLIILPTRELALQTYSVALNISRNFFRT-TVVYGGSSMEKQIHDLRD-SKIIIGTPGRII 132

Query: 345 DHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVED 404
           D L +      EH+   ++DEAD  L++GF +++++I+  LP+ RQ +L SAT   +++D
Sbjct: 133 D-LINRDLLNLEHVGMFILDEADMMLDMGFIDDIYKIIENLPEKRQNVLASATMPERLDD 191

Query: 405 LAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMS 464
           + K       L    +   P   V      +TI+P  ++F  L +++  N+  K I+F+ 
Sbjct: 192 MIKNLMNDPELIAVSNGYTPKTIV----HDYTIIPEHKKFSALLSYIDENRDMKRIIFVR 247

Query: 465 SCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPA 524
           + +G    +E+LN      + LHG  +Q  R  +   F       ++ T+VAARG+DIP 
Sbjct: 248 TKHGAVVLSEILNKCGFKNVTLHGDMRQRSREISIKRFRNYRSGIMIATNVAARGIDIPD 307

Query: 525 VDWIVQYDPP-DEPKEYIHRVGRTAR 549
           VD I+ +D P D+ K Y HR GR+ R
Sbjct: 308 VDEIINFDAPIDDIKSYSHRAGRSGR 333

ref|YP_039444.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar konkukian str. 97-27]
gb|AAT62665.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar konkukian str. 97-27]
(481 aa)

Score: 196 bits (499), Expect: 1.61728e-48
Length: 361, Idn/Pos/Gap = 121/192/9 (33%/53%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +  LS+   R +  +G+   TE+Q   IP+AL  +D++  ++TGSGKT +F IP+ E+
Sbjct:   6 FSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEM  65

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +   +W   N   A+++ PTRELA+Q+   + ++        A + G +    +  +L  
Sbjct:  66 V---EW-EENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQ 121

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
            T+I+V TPGR+LDH++       E L++LVIDEAD  L +GF +++  I+  LP  R T
Sbjct: 122 KTHIVVGTPGRVLDHIEKGT-LSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMT 180

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           MLFSAT    VE L++ ++   P H+ I A     T + ++     V  E++  LL    
Sbjct: 181 MLFSATLPEDVERLSR-TYMNAPTHIEIKAAG--ITTDKIEHTLFEVREEEKLSLLKDVT 237

Query: 452 KRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLL 511
                   I+F  +   V      LN ++ P   +HG   Q  R     +F + +   L+
Sbjct: 238 TIENPDSCIIFCRTQENVDHVYRQLNRVNYPCDKIHGGMVQENRFGVMDDFRKGKFRYLV 297

Query: 512 CTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQH 571
            TDVAARG+DI  +  ++ YD P E + Y+HR GRT R  +  G+AI F+ P E  FL+ 
Sbjct: 298 ATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNS-GKAITFITPYEDRFLEE 356

Query: 572 L 572
           +
Sbjct: 357 I 357

ref|ZP_00212305.1| COG0513: Superfamily II DNA and RNA helicases [Burkholderia cepacia R18194]
(505 aa)

Score: 196 bits (499), Expect: 1.6445e-48
Length: 358, Idn/Pos/Gap = 128/196/9 (35%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FD   L+   L+ I E G+   T IQA+AIP+ L+GRD++ +A+TG+GKT +F +PI++ 
Sbjct:  13 FDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQR  72

Query: 272 LY----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           L      +    R+   A+I+ PTRELA Q+   +H  A H     A+V GG +   +  
Sbjct:  73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 132

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           +L  G  +L+ATPGRLLDH+Q     + + ++ LV+DEADR L++GF  ++  IL +LPK
Sbjct: 133 ELRRGVEVLIATPGRLLDHVQQKTANLGQ-VQILVLDEADRMLDMGFLPDLQRILNLLPK 191

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQT+LFSAT + +++ LA    +       I+  +  +T   + Q    V    +   +
Sbjct: 192 ERQTLLFSATFSGEIKKLASTYLRNPQT---IEVARSNSTNANVTQIVYDVAEGDKQAAV 248

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L+    K++IVF +S  G    A  L    V    +HG + Q +R      F R E 
Sbjct: 249 VQLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKTQIERMQALDAFKRGEI 308

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
             L+ TDVAARGLDI  +  ++ +D P   ++Y+HR+GRT R     G A+    P+E
Sbjct: 309 EALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRA-GATGDALSLCSPNE 365

gb|AAU01909.1| putative ATP-dependent RNA helicase [Oryza sativa (indica cultivar-group)]
(828 aa)

Score: 196 bits (499), Expect: 1.6445e-48
Length: 387, Idn/Pos/Gap = 133/210/13 (34%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+S+ L E   RG+   G+   T IQ +A+PL L+G DI A ARTGSGKT AFL+P+++ 
Sbjct:  28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR  87

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +       G  A+I++PTR+LA Q       L        ++++GG +  ++ E+L  
Sbjct:  88 LRRHD--AGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAE 145

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I++ATPGRL+ HL          + ++V DEAD    +G  +++H+IL  L  TRQT
Sbjct: 146 NPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQT 205

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT    + D AK   +  P  + +D ++ ++    L+  F  +  E++   L   +
Sbjct: 206 LLFSATLPQALADFAKAGLRD-PQIVRLDLDKKISP--DLKLAFFTLRQEEKLAALLYLV 262

Query: 452 KR--NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           +   +  ++ I+F+S+ + V+F   L     +     +G   Q  R     +F  RE   
Sbjct: 263 RERISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARETMI 322

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGF 568
           L+ TDVAARGLDIP +D +V +D P +PK ++HRVGR AR   GR G A  F+   ++ +
Sbjct: 323 LIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVAR--QGRSGTAYTFVTSEDMAY 380

Query: 569 L--QHLRDAKVPLNEYEFPKEKLADIQ 593
           L   HL  +K PL      +E L D++
Sbjct: 381 LLDLHLFLSK-PLRPAPTEEELLKDME 406

ref|ZP_00335742.1| COG0513: Superfamily II DNA and RNA helicases [Thiobacillus denitrificans ATCC 25259]
(460 aa)

Score: 196 bits (499), Expect: 1.65827e-48
Length: 365, Idn/Pos/Gap = 129/197/10 (35%/53%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L+   LR ++EMG+   T IQA+ IP AL G DIL +A+TG+GKT AF +P+++ 
Sbjct:   4 FAELGLAPDILRALDEMGYVSPTPIQAQVIPRALQGGDILGAAQTGTGKTAAFALPLIQR  63

Query: 272 LY----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           L      +    ++   A+I+ PTRELA+Q+   +     H      +V GG N  T+  
Sbjct:  64 LLPFANTSTSPAKHPIRALILTPTRELAIQVEEAIQAYTKHVPLRSLVVYGGVNINTQIP 123

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
            L  G  ILVATPGRLLDH+Q+ +  +   +  LV+DEADR L++GF  ++  I+ +LP 
Sbjct: 124 ILKTGVEILVATPGRLLDHVQN-KTLMLTQVNTLVLDEADRMLDMGFMPDLRRIVALLPA 182

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            R  M+FSAT   ++  LA  S    P  + +   +   TV    Q    V  E++ +LL
Sbjct: 183 QRVNMMFSATFPEEIRKLAD-SILSTPTFIEVARNETAVTV---TQVVHPVHHERKRQLL 238

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              +K    ++++VF  +  G    A  LN   +    +HG + Q +R      F     
Sbjct: 239 AHLIKSRDLRQVLVFTGTKLGCNRLANELNKAGIHADAIHGDKTQQERIKALDAFKAGTI 298

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVG 567
             L+ TDVAARG+DI A+ ++V YD P   ++Y+HR+GRT R    +G AI  +  +E  
Sbjct: 299 RVLVATDVAARGIDIEALPFVVNYDLPHNAEDYVHRIGRTGRA-GAKGEAISLVSEAETR 357

Query: 568 FLQHL 572
           +L+ +
Sbjct: 358 YLKDI 362

ref|NP_349354.1| ATP dependent RNA helicase DeaD, superfamily II [Clostridium acetobutylicum ATCC 824]
gb|AAK80694.1| ATP dependent RNA helicase DeaD, superfamily II [Clostridium acetobutylicum ATCC 824]
pir||C97238 ATP dependent RNA helicase DeaD, superfamily II [imported] - Clostridium acetobutylicum
(481 aa)

Score: 196 bits (499), Expect: 1.7876e-48
Length: 364, Idn/Pos/Gap = 124/196/11 (34%/53%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LSE  L+ IE++G+ + + IQ + IP+ L+G+DI+A A+TGSGKT AF IP+ E 
Sbjct:   6 FRDLGLSEEILKSIEKLGYKKPSSIQEKVIPVILNGKDIIAKAKTGSGKTAAFAIPVCEK  65

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           +   +  P+     +++APTRELA QI     ++          + G      +  +L  
Sbjct:  66 IELEEREPQ----VLVLAPTRELAYQIKEDFLNIGRFKRLRCISIFGKEPISNQIRELKQ 121

Query: 332 GTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
             +I+V TPGR+LDH++  RG +  E +++ +IDEAD  L +GF E++  IL  +PK + 
Sbjct: 122 RVHIVVGTPGRVLDHIE--RGTLNLEKVKYFIIDEADEMLNMGFIEQVESILIKMPKNKN 179

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T LFSAT   ++  L+K   +       I+ +    T  G+ Q +  V S ++F LL   
Sbjct: 180 TFLFSATLPEEIVMLSKKYMKN---FENIEVQNEGKTKGGIHQVYYEVESREKFDLLKKV 236

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           + +      I+F  + N V+     +  +    + +HG   Q  R +    F R E   L
Sbjct: 237 IYKEVPGSSIIFCRTKNNVEDVLVKMKNMKFSCMAIHGGMLQENRIAVMNAFKRGEFTFL 296

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARG+D+  V  ++ YD P E + YIHR+GRT R +  +G AI F+   E  FL+
Sbjct: 297 IATDVAARGIDVENVTHVINYDIPMEKESYIHRIGRTGR-MGNKGIAITFVTSKEERFLK 355

Query: 571 HLRD 574
            + +
Sbjct: 356 EIEE 359

ref|ZP_00171719.1| COG0513: Superfamily II DNA and RNA helicases [Ralstonia eutropha JMP134]
(506 aa)

Score: 196 bits (498), Expect: 1.95943e-48
Length: 363, Idn/Pos/Gap = 127/197/7 (34%/54%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  +R + E G+   T IQA+AIP  L G D+LA A+TG+GKT  F +P+++L
Sbjct:   3 FSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPMLQL  62

Query: 272 LYKA--KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L ++  +   +    A+++ PTRELA Q+   + +   +      ++ GG     + E+L
Sbjct:  63 LSESAPQRQGKPAVRALVLTPTRELAAQVEESVRNYGKYVRLRSMVMFGGVGINPQIEQL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G  I+VATPGRLLDH+ S R      +  LV+DEADR L++GF  ++ +IL +LP  R
Sbjct: 123 RRGVEIVVATPGRLLDHV-SQRTIDLSSVELLVLDEADRMLDMGFIHDIRKILNVLPPKR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q +LFSAT +  +  LA            I+  +   T E + Q    V  E++  LL  
Sbjct: 182 QNLLFSATFSDDIRALADRLLNNPA---SIEVARRNTTAETVAQRVYPVDRERKRELLAH 238

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            ++ +   +++VF  + +G    AE L    +  L +HG + QS RT    EF       
Sbjct: 239 LVREHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKAGTLRL 298

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ TD+AARG+DI  +  +V +D P+ P++Y+HR+GRT R     G AI  +   E G L
Sbjct: 299 LVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRA-GAEGEAISLVCVDEHGLL 357

Query: 570 QHL 572
           + +
Sbjct: 358 RDI 360

emb|CAB12265.1| ydbR [Bacillus subtilis subsp. subtilis str. 168]
ref|NP_388339.1| hypothetical protein BSU04580 [Bacillus subtilis subsp. subtilis str. 168]
pir||D69772 ATP-dependent RNA helicase homolog ydbR - Bacillus subtilis
dbj|BAA19295.1| ATP-DEPENDENT RNA HELICASE DEAD HOMOLOG. [Bacillus subtilis]
(511 aa)

Score: 196 bits (498), Expect: 1.9924e-48
Length: 360, Idn/Pos/Gap = 131/190/11 (36%/52%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F    LS   ++ I  MGF   T IQA+ IPL LS +D++  A+TG+GKT AF IP+VE 
Sbjct:  22 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE-  80

Query: 272 LYKAKWMPRN-GTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
               K  P +    AI+IAPTRELA+Q+   L+ +          + GG +   +   L 
Sbjct:  81 ----KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALK 136

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
              NI+V TPGRLLDH+ + R     ++  +V+DEAD  L +GF +++  IL  +P   Q
Sbjct: 137 KNPNIIVGTPGRLLDHI-NRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQ 195

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    ++ +A+  F  +P H+ + A++   TV  +QQ +  V   ++F  L   
Sbjct: 196 TLLFSATMPAPIKRIAE-RFMTEPEHVKVKAKE--MTVSNIQQFYLEVQERKKFDTLTRL 252

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L     +  IVF  +   V   AE LN        +HG   Q+KR     +F       L
Sbjct: 253 LDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVL 312

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLDI  V  +  +D P +P+ Y+HR+GRT R     G A+ F+ P E   L+
Sbjct: 313 VATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRA-GKTGMAMTFITPREKSMLR 371

ref|ZP_00385770.1| COG0513: Superfamily II DNA and RNA helicases [Lactobacillus casei ATCC 334]
(502 aa)

Score: 196 bits (497), Expect: 2.64594e-48
Length: 364, Idn/Pos/Gap = 123/193/9 (33%/53%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L    L+ I + GF   T IQA  IPL L+G+D++  A+TG+GKT AF +PI++
Sbjct:   2 KFKELGLDHDLLKAIAQSGFEEATPIQAETIPLVLAGKDVIGQAQTGTGKTAAFGLPILQ  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            + KA         A++I+PTRELA+Q    L+ L          V GGA+ R +  +L 
Sbjct:  62 NIDKAD----RSIQALVISPTRELAIQTQEELYRLGQDKKIKVQAVYGGADIRRQIRQLS 117

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
               I+V TPGR+LDH+        ++L+ LV+DEAD  L++GF +++ +I+  +P  RQ
Sbjct: 118 EHPQIVVGTPGRILDHI-GRHTLKLQNLKVLVLDEADEMLDMGFIDDIEKIVEQMPTARQ 176

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    +  L    F  +P+ + I A++   T + ++Q +      ++F ++   
Sbjct: 177 TLLFSATIPASIMRLTN-KFMHEPVTVKIKAKE--LTADTVEQYYVRAKDYEKFDVMTRL 233

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
                    ++F  +   V      L         +HG   Q KR S   +F   +   L
Sbjct: 234 FDVQDPDLALIFGRTKRRVDELTRGLKARGYRAEGIHGDLTQQKRMSVLRQFKSGQLDFL 293

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLDI  V  +  YD P +P  Y+HR+GRT R  H +G ++ F+ P+E+ +L 
Sbjct: 294 VATDVAARGLDISGVTHVYNYDIPQDPDSYVHRIGRTGRAGH-KGVSVTFVTPNEIEYLH 352

Query: 571 HLRD 574
            + D
Sbjct: 353 TIED 356

gb|AAC26676.1| putative RNA helicase [Arabidopsis thaliana]
pir||E84488 probable RNA helicase [imported] - Arabidopsis thaliana
ref|NP_178818.1| DEAD box RNA helicase, putative [Arabidopsis thaliana]
(845 aa)

Score: 196 bits (497), Expect: 2.66811e-48
Length: 405, Idn/Pos/Gap = 130/214/22 (32%/52%/5%)

Query: 197 QEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASART 256
           +E+ +P   + +  RFD   +S  TL+ +   G  +MT +Q   +   L G+D L  A+T
Sbjct: 362 EEKQEPHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKT 421

Query: 257 GSGKTLAFLIPIVELLYKAKWMPRNGTG--------AIIIAPTRELAMQIFGVLHDLASH 308
           G+GK++AFL+P +E + KA     +G G         +I+ PTRELA QI      L  +
Sbjct: 422 GTGKSMAFLLPAIETVLKAM---NSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKN 478

Query: 309 HHQTRA-IVMGGANRRTEAEKLIN-GTNILVATPGRLLDHLQSTRGFV--FEHLRFLVID 364
           H       ++GG   R + ++L +    IL+ATPGRLLDH+++  G       L+  ++D
Sbjct: 479 HDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVD 538

Query: 365 EADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQP 424
           EAD  L++GF+ ++ +I+  LP+ RQ++LFSAT   +V  ++++  ++   ++       
Sbjct: 539 EADLLLDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGC 598

Query: 425 VATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLNYID 480
           V T + ++Q   + P E  F L+   LK +       KIIVF S+         LL  + 
Sbjct: 599 VETHDKVKQSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMK 658

Query: 481 VPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEY 540
           + V ++H ++ Q  RT    EF       L+ +DV+ARG++ P V  ++Q   P + ++Y
Sbjct: 659 LNVREIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQY 718

Query: 541 IHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP 585
           IHR+GRT R   G G+ +L + P E  FL  L+D  +PL     P
Sbjct: 719 IHRLGRTGREGKG-GKGLLLIAPWERYFLDELKD--LPLEPIPAP 760

ref|ZP_00098890.1| COG0513: Superfamily II DNA and RNA helicases [Desulfitobacterium hafniense DCB-2]
(428 aa)

Score: 196 bits (497), Expect: 2.73574e-48
Length: 352, Idn/Pos/Gap = 121/192/9 (34%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
            + L +  P  + +   G++  T IQA AIP  L G D+L  A+TG+GKT AF IPI++ 
Sbjct:   6 LNELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQS  65

Query: 272 LYKAKWM--PRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L   + +   +    A+++APTRELA QI         +      ++ GG  +  +  KL
Sbjct:  66 LAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKL 125

Query: 330 INGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
             G +ILVATPGRLLD +   +GF+   H+   V+DE D+ L++G   ++  I+  LP+ 
Sbjct: 126 EKGIDILVATPGRLLDLIN--QGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRE 183

Query: 389 RQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLF 448
           RQ MLFSAT   ++E LA  +  + P+ + +  E   + ++ ++Q    V    +  LL 
Sbjct: 184 RQNMLFSATMPVEIEKLAD-TILKGPVKIAMTPE--FSPLDIIEQEVYFVDKANKAALLT 240

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
            +LK N+   ++VF  + +G     + LN      + +HG + Q+ R      F +R+  
Sbjct: 241 YWLKNNEYDSVLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQALHAFKKRKTR 300

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILF 560
            L+ TD+AARGLDI  +  ++ Y+ P+ P+ YIHR+GRT R   G G+AI F
Sbjct: 301 ILVATDIAARGLDIQELSHVINYNLPEVPETYIHRIGRTGRAGLG-GKAITF 351

emb|CAI59960.1| ATP-dependent RNA helicase (DEAD/DEAH box family) [Listeria ivanovii]
(474 aa)

Score: 196 bits (497), Expect: 2.73574e-48
Length: 364, Idn/Pos/Gap = 127/200/20 (34%/54%/5%)

Query: 213 DSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL 272
           ++L LSE   R I E+G+   T +Q   IP+AL+G+DI+A ++TGSGKT AF IPI E  
Sbjct:   6 NNLNLSEEIKRAINELGYKEATPVQKEVIPVALTGKDIVAKSQTGSGKTAAFAIPIAE--  63

Query: 273 YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLING 332
            +  W   N   A+II PTRELAMQ+     ++        A + G +    +  +L   
Sbjct:  64 -QVIW-EENKPQALIIVPTRELAMQVKAECTNIGRFKRIKAAAIYGQSPFAKQKLELSQK 121

Query: 333 TNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTM 392
            +I+V TPGRLLDH++     V + + +LV+DE D  L +GF +++ +IL+ LPK RQ +
Sbjct: 122 NHIVVGTPGRLLDHIEKGTLNV-DKVAYLVLDEVDEMLSMGFIDQVEDILQFLPKKRQNL 180

Query: 393 LFSATQTTKVEDLAKVSFQQKPLHLGIDAEQ--PVATVEGLQQGFTIVPSEQRFRLLFTF 450
            FSAT   +++DL K  +Q  P+ + + AE+  P+  +E        + +E + + L   
Sbjct: 181 FFSATMPEEMQDLIK-RYQDDPIVIEMAAEKTNPITHIE--------MQTENKEKTLQDV 231

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L        I+F ++ N V    EL + + V    +HG  +Q +R     +F   +   L
Sbjct: 232 LITENPDSAIIFCNTKNQVD---ELSDLLQVNTAKIHGGLRQEERFRAMDDFKSGKSRFL 288

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVA RG+D+  V  ++ YD P E + Y+HR+GRT R  +  G+AI F+  +E   L+
Sbjct: 289 IATDVAGRGIDVENVTLVINYDLPIEKENYVHRIGRTGRAGNS-GKAISFVKTNENPLLR 347

Query: 571 HLRD 574
            + D
Sbjct: 348 DMED 351

gb|AAH84268.1| LOC495097 protein [Xenopus laevis]
(717 aa)

Score: 196 bits (497), Expect: 2.78178e-48
Length: 400, Idn/Pos/Gap = 129/212/16 (32%/53%/4%)

Query: 176 PEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTE 235
           P     S    +  + E    Q + K  SG      F S+ LS P  +G+ + G+   T 
Sbjct:  46 PTADAGSDSEAEPDTRELVRAQNKKKKKSG-----GFQSMGLSYPVYKGVMKKGYKVPTP 100

Query: 236 IQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELA 295
           IQ + +P+ L G+D++A ARTGSGKT  FLIP+ E L       + G   +I++PTRELA
Sbjct: 101 IQRKVVPVILDGKDVVAMARTGSGKTACFLIPMFEKLKAHS--AQTGVRGLILSPTRELA 158

Query: 296 MQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVF 355
           +Q      +L        A+++GG     +   L    +I++ATPGRL+ H+        
Sbjct: 159 LQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLM-HVAIEMNLKL 217

Query: 356 EHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPL 415
             + ++V DEADR  E+GF E++ EI+  LP+TRQT+LFSAT    + + A+    + P+
Sbjct: 218 RSVEYVVFDEADRLFEMGFAEQLQEIISRLPETRQTLLFSATLPKMLLEFARAGLTE-PV 276

Query: 416 HLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLK--RNQRKKIIVFMSSCNGVKFYA 473
            + +D +  ++  + L+  F  V  E +  +L   L+     +++ ++F+++ +  ++  
Sbjct: 277 LIRLDVDTKLS--DQLKLSFFNVRVEDKPAVLLHLLRCVVKPQEQTVIFVATKHHAEYLR 334

Query: 474 ELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDP 533
           ELL+   +P   ++    Q+ R      F   +   LL TDVAARG+DIP +D ++ Y+ 
Sbjct: 335 ELLDMQGIPCSHIYSSLDQTARKINLGLFLHGKVRALLVTDVAARGIDIPMLDNVINYNF 394

Query: 534 PDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL 572
           P + K ++HRVGR AR   GR G A  F+ P E+ ++  L
Sbjct: 395 PPKAKLFLHRVGRVARA--GRSGTAYSFIAPDEIPYVYDL 432

ref|NP_830127.1| ATP-dependent RNA helicase [Bacillus cereus ATCC 14579]
gb|AAP07328.1| ATP-dependent RNA helicase [Bacillus cereus ATCC 14579]
(514 aa)

Score: 196 bits (497), Expect: 2.80508e-48
Length: 359, Idn/Pos/Gap = 127/198/10 (35%/55%/2%)

Query: 228 MGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAII 287
           MGF   T IQA  IP AL G+DI+  A+TG+GKT AF +P+++ +   K         I+
Sbjct:   1 MGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHK----ESVQGIV  56

Query: 288 IAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHL 347
           IAPTRELA+Q+   L+ +  H       + GG +   +   L    +I+V TPGR+LDH+
Sbjct:  57 IAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHI 116

Query: 348 QSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAK 407
            + +    +++  +V+DEAD  L +GF E++  IL  +P+T QT+LFSAT    +  +A+
Sbjct: 117 -NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAE 175

Query: 408 VSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRKKIIVFMSSCN 467
             F  +P H+ + A++   T+  +QQ +  V  +++F +L   L     +  IVF  +  
Sbjct: 176 -RFMTEPQHIKVKAKE--VTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKR 232

Query: 468 GVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDW 527
            V   +E LN        +HG   Q+KR S   +F       L+ TDVAARGLDI  V  
Sbjct: 233 RVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTH 292

Query: 528 IVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHL-RDAKVPLNEYEFP 585
           +  +D P +P+ Y+HR+GRT R    +G A+LF+ P E G L+++ R  K  ++  + P
Sbjct: 293 VYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESGQLKNIERTTKRKMDRMDAP 350

gb|AAH94142.1| Unknown (protein for IMAGE:7010773) [Xenopus laevis]
(693 aa)

Score: 196 bits (497), Expect: 2.94909e-48
Length: 400, Idn/Pos/Gap = 129/212/16 (32%/53%/4%)

Query: 176 PEVTQKSSPALQSLSSEHASEQEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTE 235
           P     S    +  + E    Q + K  SG      F S+ LS P  +G+ + G+   T 
Sbjct:  46 PTADAGSDSEAEPDTRELVRAQNKKKKKSG-----GFQSMGLSYPVYKGVMKKGYKVPTP 100

Query: 236 IQARAIPLALSGRDILASARTGSGKTLAFLIPIVELLYKAKWMPRNGTGAIIIAPTRELA 295
           IQ + +P+ L G+D++A ARTGSGKT  FLIP+ E L       + G   +I++PTRELA
Sbjct: 101 IQRKVVPVILDGKDVVAMARTGSGKTACFLIPMFEKLKAHS--AQTGVRGLILSPTRELA 158

Query: 296 MQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVF 355
           +Q      +L        A+++GG     +   L    +I++ATPGRL+ H+        
Sbjct: 159 LQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLM-HVAIEMNLKL 217

Query: 356 EHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPL 415
             + ++V DEADR  E+GF E++ EI+  LP+TRQT+LFSAT    + + A+    + P+
Sbjct: 218 RSVEYVVFDEADRLFEMGFAEQLQEIISRLPETRQTLLFSATLPKMLLEFARAGLTE-PV 276

Query: 416 HLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLK--RNQRKKIIVFMSSCNGVKFYA 473
            + +D +  ++  + L+  F  V  E +  +L   L+     +++ ++F+++ +  ++  
Sbjct: 277 LIRLDVDTKLS--DQLKLSFFNVRVEDKPAVLLHLLRCVVKPQEQTVIFVATKHHAEYLR 334

Query: 474 ELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDP 533
           ELL+   +P   ++    Q+ R      F   +   LL TDVAARG+DIP +D ++ Y+ 
Sbjct: 335 ELLDMQGIPCSHIYSSLDQTARKINLGLFLHGKVRALLVTDVAARGIDIPMLDNVINYNF 394

Query: 534 PDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFLQHL 572
           P + K ++HRVGR AR   GR G A  F+ P E+ ++  L
Sbjct: 395 PPKAKLFLHRVGRVARA--GRSGTAYSFIAPDEIPYVYDL 432

ref|ZP_00052498.2| COG0513: Superfamily II DNA and RNA helicases [Magnetospirillum magnetotacticum MS-1]
(402 aa)

Score: 196 bits (497), Expect: 2.94909e-48
Length: 342, Idn/Pos/Gap = 118/190/9 (34%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L+EP L+ +E  G+   T IQ ++IP  L G D+L  A+TG+GKT +F +P+++ 
Sbjct:   5 FSELGLAEPLLKALEAEGYTTPTPIQEQSIPHLLQGSDVLGLAQTGTGKTASFALPLLQR  64

Query: 272 L--YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L  +K + MP++    +++ PTRELA+Q+         H+    A+V GG     + + +
Sbjct:  65 LDQFKKRAMPKS-CRILVLTPTRELAVQVGQSFKTYGCHYRLRHALVFGGVGMVPQIKTM 123

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRLLD L        + +  LV+DEADR L++GF + + +I+ ++PK R
Sbjct: 124 AGGVDVLVATPGRLLD-LIDQGAIRLDSVEALVLDEADRMLDMGFIQPIRKIVAMVPKQR 182

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA-TVEGLQQGFTIVPSEQRFRLLF 448
           QT+LFSAT    +  LA  S    P+ + +    PV+ TV+ + Q    V  E +  LL 
Sbjct: 183 QTVLFSATMPDSIVGLAN-SVLHTPVRVEV---TPVSSTVDKIDQKVLFVDREHKRTLLT 238

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
             L      + +VF  + +G     ELL    +    +HG + Q  R     +F   +  
Sbjct: 239 DILGGADVVRALVFTRTKHGANRVVELLEKAGIDADAIHGNKSQGARQKALSDFRDGKIK 298

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            L+ TD+AARG+D+  +  ++ ++ P+EP+ Y+HR+GRTAR 
Sbjct: 299 ALVATDIAARGIDVDGITHVINFELPNEPESYVHRIGRTARA 340

ref|ZP_00204260.1| COG0513: Superfamily II DNA and RNA helicases [Methanococcoides burtonii DSM 6242]
(456 aa)

Score: 196 bits (497), Expect: 3.04918e-48
Length: 374, Idn/Pos/Gap = 124/199/11 (33%/53%/2%)

Query: 220 PTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAKW 277
           P  R + E G+   T IQ  +IP  L  RD++  A+TG+GKT AF++PI++ +     K 
Sbjct:   4 PLQRALTEEGYTSPTPIQELSIPHLLDNRDMIGIAQTGTGKTAAFILPILQNMSAIHKKA  63

Query: 278 MPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILV 337
            P+     +++APTRELA QI         +      +V GG  +  +   L  G + LV
Sbjct:  64 TPKKPR-VLVLAPTRELAAQIGESFATYGKYTRYKHTVVFGGVGQTPQVRALSRGVDCLV 122

Query: 338 ATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSAT 397
           ATPGRLLD +Q        ++ + V+DEADR L++GF  ++++I+ +LPK RQ++ FSAT
Sbjct: 123 ATPGRLLDLIQQGH-IKLSNVEYFVLDEADRMLDMGFLNDVNKIVDMLPKKRQSLFFSAT 181

Query: 398 QTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK 457
            + ++  LA+      P  + +  +    TVE ++Q    V S+ +  LL   L+     
Sbjct: 182 MSPEISTLAR-KMLSNPAQVEVTPQ--ATTVERIEQFIFFVDSDNKNELLLHLLRGEHLD 238

Query: 458 KIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAA 517
            ++VF  + +      E+LN  ++    +HG + Q+ RT T   F   +   L+ TD+AA
Sbjct: 239 CVLVFTRTKHRANKVTEMLNKSNINAGAIHGSKSQTHRTKTLQNFKSGQLRVLVATDIAA 298

Query: 518 RGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL---QHLRD 574
           RG+DI  +  ++ YD P+ P+ Y+HR+GRTAR     G A  F    E  FL   + L D
Sbjct: 299 RGIDIEDISHVINYDLPNIPESYVHRIGRTARA-GAEGTAYSFCAADERDFLRDIEKLTD 357

Query: 575 AKVPLNEYEFPKEK 588
            ++ + E+ +  EK
Sbjct: 358 MEIEVAEHNYHSEK 371

ref|ZP_00308098.1| COG0513: Superfamily II DNA and RNA helicases [Cytophaga hutchinsonii]
(580 aa)

Score: 196 bits (497), Expect: 3.07472e-48
Length: 399, Idn/Pos/Gap = 134/215/21 (33%/53%/5%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +  IE +G++  T IQ + IP+ ++G+D+   A+TG+GKT AF IP +E 
Sbjct:   3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH  62

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAI-VMGGANRRTEAEKLI 330
           +     +  N T ++I+ PTRELA+Q+   L  L+      R + V GG +   +   L 
Sbjct:  63 VD----ISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLK 118

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G +I+V TPGR++DHL   R     HL  +++DEAD  L +GF E++  IL  LP+ RQ
Sbjct: 119 AGAHIVVGTPGRIIDHLDR-RTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQ 177

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    +  LAK  FQ  P  + I+ ++   T+  ++Q + +V + Q+  ++   
Sbjct: 178 TVLFSATLAPPILALAK-RFQNNPEIIKIERKE--LTISTVEQFYYLVKNSQKTEIVTQI 234

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           +  N  + +++F ++   V+   + L       + LHG + Q  RT    +F +     L
Sbjct: 235 IDLNNLQLMLIFCNTKRKVEEVTDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLANIL 294

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARG+D+  VD ++ YD P + + Y+HR+GRT R     G++   +   E   L+
Sbjct: 295 VATDVAARGIDVTGVDAVINYDVPLDIENYVHRIGRTGRAGQ-LGKSFTLVTSDEKYKLR 353

Query: 571 HL-RDAKVPLNEYEFP---------KEKLAD-IQTQLEK 598
            + R  K  + + E P         K+KLA  I T+LEK
Sbjct: 354 DIERYTKATIEKAETPTRQELVAYKKDKLATRITTELEK 392

dbj|BAB10554.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
(564 aa)

Score: 195 bits (496), Expect: 3.23257e-48
Length: 397, Idn/Pos/Gap = 131/209/11 (32%/52%/2%)

Query: 183 SPALQSLSSE----HASEQEQPKPSSGLLTPHR-FDSLPLSEPTLRGIEEMGFARMTEIQ 237
           SP +Q+++ +    + +E++       +  P + F      +  L  I ++GF   T IQ
Sbjct: 106 SPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQ 165

Query: 238 ARAIPLALSGRDILASARTGSGKTLAFLIP-IVELLYKAKWMPRNGTGAIIIAPTRELAM 296
           A+  P+AL GRD++  A TGSGKTLA+L+P +V +  + +    +G   +I+APTRELA+
Sbjct: 166 AQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAV 225

Query: 297 QIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFE 356
           QI                 + GGA +  +   L  G  I++ATPGRL+D L+     + +
Sbjct: 226 QIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNL-K 284

Query: 357 HLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLH 416
            + +LV+DEADR L++GFE ++ +I+  +   RQT+L+SAT   +VE LA+  F + P +
Sbjct: 285 RVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLAR-QFLRDP-Y 342

Query: 417 LGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR-NQRKKIIVFMSSCNGVKFYAEL 475
             I     +   + + Q   IVP+ +++  L T LK+     KI++F+ +  G       
Sbjct: 343 KAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQ 402

Query: 476 LNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPD 535
           L     P L +HG + QS+R     EF       +  TDVAARGLD+  +  +V YD P+
Sbjct: 403 LRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPN 462

Query: 536 EPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHL 572
             ++YIHR+GRT R    +G A  F       F + L
Sbjct: 463 TLEDYIHRIGRTGRA-GAKGMAFTFFTHDNAKFAREL 498

gb|EAL25690.1| GA11795-PA [Drosophila pseudoobscura]
(507 aa)

Score: 195 bits (496), Expect: 3.25965e-48
Length: 362, Idn/Pos/Gap = 125/192/10 (34%/53%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL L    ++ + ++G    T IQ   IP  LSG+D + +A+TGSGKT AF +PI+E 
Sbjct:   9 FQSLGLRPWMVKQLTKLGLKGATPIQQNCIPAILSGKDCIGAAQTGSGKTFAFALPILER  68

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +          A+++ PT ELA QI                +V GG ++  E++KL+ 
Sbjct:  69 LSEEPV----SHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQMIESQKLMQ 124

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+VA PGRL DHL     F F++L++LV+DEADR L   F+E +  I R LP TRQ 
Sbjct: 125 RPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLAIIERCLPSTRQN 184

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           + FSAT    +++ +     +  +    D+   VATV+ L Q + +     R  +L   L
Sbjct: 185 LFFSATMKDFMKESSIFPISKDCIEWSQDSN--VATVDTLDQRYLLCADYDRDMVLIESL 242

Query: 452 KR----NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
           ++    N+   +++F ++    +  +  L  +D+  + LHG  +Q +R +    F     
Sbjct: 243 RKYREENENSNVMIFTNTKKYCQLLSMTLKSMDIDNVCLHGFMRQKERVAALSRFKSNHI 302

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVG 567
            TL+ TDVA+RGLDIP+V  ++ +  P  PKEYIHRVGRTAR         +F  P ++ 
Sbjct: 303 RTLIATDVASRGLDIPSVQLVINHMLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLE 362

Query: 568 FL 569
            L
Sbjct: 363 LL 364

ref|NP_928806.1| ATP-dependent RNA helicase RhlE [Photorhabdus luminescens subsp. laumondii TTO1]
emb|CAE13804.1| ATP-dependent RNA helicase RhlE [Photorhabdus luminescens subsp. laumondii TTO1]
(434 aa)

Score: 195 bits (496), Expect: 3.94926e-48
Length: 341, Idn/Pos/Gap = 120/191/6 (35%/56%/1%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F SL LS   LR +EE G++  T IQ +AIP+ L+G+D+LASA+TG+GKT  F +P+++ 
Sbjct:   9 FKSLGLSADILRAVEEQGYSAPTPIQQQAIPVVLAGKDLLASAQTGTGKTAGFTLPMLQR  68

Query: 272 LYKA--KWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L  +  +   R    A+I+ PTRELA Q+   + D + +      +V GG +   +  KL
Sbjct:  69 LNDSPIQMKGRRPVRALILTPTRELAAQVGENVRDYSKYLRLRSLVVFGGVSINPQMMKL 128

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G +ILVATPGRLLD L+         +  LV+DEADR L++GF  ++  +L  LP  R
Sbjct: 129 RGGVDILVATPGRLLD-LEHQNAVDLSRVEILVLDEADRMLDMGFIHDIRRVLNKLPPKR 187

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q +LFSAT +  ++ LA    +     + ++  +  +  E ++Q    V  +++  LL  
Sbjct: 188 QNLLFSATFSDDIKSLASKLLRDP---VSVEVARRNSASEQIEQLVHFVDKKRKGELLSF 244

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            +     ++++VF  + +G    AE LN   V    +HG + Q  RT    +F       
Sbjct: 245 LIGSRNWQQVLVFTRTKHGANRLAEQLNKDGVTASAIHGNKSQGARTRALADFKDGRIRV 304

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
           L+ TD+AARGLDI  + ++V ++ P+  ++Y+HR+GRT R 
Sbjct: 305 LVATDIAARGLDIDQLPYVVNFELPNVAEDYVHRIGRTGRA 345

ref|YP_033476.1| ATP-dependent RNA helicase [Bartonella henselae str. Houston-1]
emb|CAF27451.1| ATP-dependent RNA helicase [Bartonella henselae str. Houston-1]
(467 aa)

Score: 195 bits (496), Expect: 4.01571e-48
Length: 355, Idn/Pos/Gap = 128/194/21 (36%/54%/5%)

Query: 207 LTP--HRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAF 264
           +TP  + FD L LS   ++ ++ +G+   T IQ+  IP  L  RD+L  A+TG+GKT +F
Sbjct:   1 MTPPLNNFDDLGLSAKVIKAVKSVGYTVPTPIQSGTIPHVLQRRDVLGIAQTGTGKTASF  60

Query: 265 LIPIVELLYKAKW---MPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGAN 321
           ++P++ LL K +    MPR     +I+ PTRELA Q+         +H    A+++GG +
Sbjct:  61 VLPMLTLLEKGRARARMPRT----LILEPTRELAAQVEENFDKYGINHRLNVALLIGGVS 116

Query: 322 RRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEI 381
              +  KL  G ++L+ATPGRLLDH +  +  +   +  LVIDEADR L++GF  E+  I
Sbjct: 117 FEQQDRKLERGVDVLIATPGRLLDHFERGK-LLLMGVEILVIDEADRMLDMGFIPEIERI 175

Query: 382 LRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSE 441
            ++ P TRQT+ FSAT   ++  L K  F   P+   ++  +  +T   + Q   +V S 
Sbjct: 176 CKLTPFTRQTLFFSATMAPEITKLTK-QFLHSPV--TVEVTKASSTASTITQ--RLVKSG 230

Query: 442 QRF---RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYI---DVPVLDLHGKQKQSKR 495
            +    R +   L  N+  K+   +  CN  +  +ELL  +   +  V  LHG   Q  R
Sbjct: 231 NKAWDKRAVLRELIHNEGDKLKNAIIFCNRKRDISELLRSLIRHNFSVGALHGDMDQYSR 290

Query: 496 TSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 550
            ST  +F   +   L+ +DVAARGLDIPAV  +  YD P   ++YIHR+GRT R 
Sbjct: 291 MSTLADFKDNKITLLVASDVAARGLDIPAVSHVFNYDVPTHAEDYIHRIGRTGRA 345

ref|XP_482407.1| putative ATP-dependent RNA-helicase [Oryza sativa (japonica cultivar-group)]
dbj|BAC98579.1| putative ATP-dependent RNA-helicase [Oryza sativa (japonica cultivar-group)]
(828 aa)

Score: 195 bits (495), Expect: 4.18679e-48
Length: 387, Idn/Pos/Gap = 132/210/13 (34%/54%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F+S+ L E   RG+   G+   T IQ +A+PL L+G DI A ARTGSGKT AFL+P+++ 
Sbjct:  28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR  87

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +       G  A+I++PTR+LA Q       L        ++++GG +  ++ E+L  
Sbjct:  88 LRRHD--AGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAE 145

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I++ATPGRL+ HL          + ++V DEAD    +G  +++H+IL  L  TRQT
Sbjct: 146 NPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQT 205

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +LFSAT    + D AK   +  P  + +D ++ ++    L+  F  +  E++   L   +
Sbjct: 206 LLFSATLPQALADFAKAGLRD-PQIVRLDLDKKISP--DLKLAFFTLRQEEKLAALLYLV 262

Query: 452 KR--NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           +   +  ++ I+F+S+ + V+F   L     +     +G   Q  R     +F  R+   
Sbjct: 263 RERISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMI 322

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGF 568
           L+ TDVAARGLDIP +D +V +D P +PK ++HRVGR AR   GR G A  F+   ++ +
Sbjct: 323 LIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVAR--QGRSGTAYTFVTSEDMAY 380

Query: 569 L--QHLRDAKVPLNEYEFPKEKLADIQ 593
           L   HL  +K PL      +E L D++
Sbjct: 381 LLDLHLFLSK-PLRPAPTEEELLKDME 406

ref|ZP_00063213.1| COG0513: Superfamily II DNA and RNA helicases [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
(540 aa)

Score: 195 bits (495), Expect: 4.25724e-48
Length: 364, Idn/Pos/Gap = 126/196/9 (34%/53%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L LS+  L  I   G+   T IQ + IPL L+GRD++  A+TG+GKT AF +PI+E
Sbjct:  14 KFSELGLSQDILDAITTHGYVEATPIQEKTIPLTLAGRDVIGQAQTGTGKTAAFGLPILE  73

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
            +     +      A+I++PTRELA+Q    L  L         +V GGA+ R + + L 
Sbjct:  74 HID----LNNKNIQALIVSPTRELAIQTAEELKKLGRDKRVDVQVVFGGADIRRQIQNLK 129

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +   ILV TPGRLLDH+ + +    +++R LV+DEAD  L +GF +++  I+   P  RQ
Sbjct: 130 SHPQILVGTPGRLLDHI-NRKTVKIDNVRTLVLDEADEMLNMGFLDDIEAIISKTPAERQ 188

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
           T+LFSAT    ++ +  V F   P H+ I+A++   T + + Q F  +   ++F  +   
Sbjct: 189 TLLFSATMPPAIKRIG-VKFMTNPEHIQIEAKE--LTTDLVDQYFVRMRENEKFDTMTRI 245

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
                 K  IVF  +   V+  +  L         LHG   Q  R+    +F   E   L
Sbjct: 246 FDVQAPKLAIVFGRTKRRVEELSRGLEARGYHAAGLHGDLTQQMRSRVLAQFKSHEINIL 305

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQ 570
           + TDVAARGLD+  V  +  +D P +P+ Y+HR+GRT R    +G ++ F+ P+E+ +L+
Sbjct: 306 VATDVAARGLDVKDVSHVYNFDIPQDPESYVHRIGRTGRA-GAKGVSVTFVAPNEMDYLR 364

Query: 571 HLRD 574
            + D
Sbjct: 365 AVED 368

ref|NP_476927.1| CG12759-PA [Drosophila melanogaster]
gb|AAF58994.1| CG12759-PA [Drosophila melanogaster]
gb|AAL13957.1| LD47509p [Drosophila melanogaster]
sp|Q07886|DBP45_DROME Probable ATP-dependent RNA helicase Dbp45A (DEAD-box protein 45A)
(521 aa)

Score: 195 bits (495), Expect: 4.29291e-48
Length: 367, Idn/Pos/Gap = 125/196/10 (34%/53%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L L    ++ + ++G    T IQ + IP  L+G+D + +A+TGSGKT AF +PI+E 
Sbjct:   9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER  68

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L +          A+++ PT ELA QI                +V GG ++  E++KL+ 
Sbjct:  69 LSEEPV----SHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQ 124

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+VA PGRL DHL     F F++L++LV+DEADR L   F+E +  I R LPKTRQ 
Sbjct: 125 RPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLPKTRQN 184

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           + FSAT    +++ +             D++  VATVE L Q + +     R  +L   L
Sbjct: 185 LFFSATMKDFIKESSIFPIASDCFEWSQDSD--VATVETLDQRYLLCADYDRDMVLIEAL 242

Query: 452 KR----NQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
           ++    N+   +++F ++    +  +  L  +++  + LHG  +Q +R +    F   + 
Sbjct: 243 RKYREENENANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQI 302

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVG 567
            TL+ TDVAARGLDIP+V+ ++ +  P  PKEYIHRVGRTAR         +F  P ++ 
Sbjct: 303 RTLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLE 362

Query: 568 FLQHLRD 574
            L  + +
Sbjct: 363 LLAAIEE 369

ref|ZP_00140905.2| COG0513: Superfamily II DNA and RNA helicases [Pseudomonas aeruginosa UCBPP-PA14]
(458 aa)

Score: 195 bits (495), Expect: 4.70557e-48
Length: 385, Idn/Pos/Gap = 134/212/14 (34%/55%/3%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           +T   F SLPLS   L  ++ +G+  MT IQA+++PL L G D++A A+TGSGKT AF +
Sbjct:   1 MTSTAFSSLPLSADLLANLDSLGYREMTPIQAQSLPLILQGHDLIAQAKTGSGKTAAFGL  60

Query: 267 PIVELLYKAKWMPRN-GTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRT 324
            ++  L      PR  G  A+++ PTRELA Q+   +  LA      + + + GG     
Sbjct:  61 ALLSPLN-----PRYFGCQALVLCPTRELADQVAKEIRRLARAADNIKVLTLCGGVPYGP 115

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           +   L +G +++V TPGR+ +HL+     V + L  LV+DEADR L++GF + + EI+  
Sbjct: 116 QVASLEHGAHVVVGTPGRIQEHLRKGT-LVLDGLNTLVLDEADRMLDMGFYDSIAEIIGQ 174

Query: 385 LPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRF 444
           LP+ RQT+LFSAT    +E LAK +F + P  + +++    + +E  Q+ F I P +QR 
Sbjct: 175 LPERRQTLLFSATYPDGIEKLAK-TFMRDPRQVKVESLHADSQIE--QRFFEIDP-KQRM 230

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             +   L+  + +  + F  +    +  A+ L    +  L LHG  +Q +R      FA 
Sbjct: 231 DAVVRLLQHFRPQSCVAFCQTRQQCQELADALKAQRISALALHGDLEQRERDQVLTVFAN 290

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
           R    L+ TDVAARGLDI A++ ++  +   +P+ +IHR+GR+ R    +G A+  + P+
Sbjct: 291 RSCNVLVATDVAARGLDIAALETVINVELARDPEVHIHRIGRSGRAGE-KGLALSLVAPA 349

Query: 565 EVGFLQHLRD-AKVPLNEYEFPKEK 588
           E    Q + D  K PL  Y   + K
Sbjct: 350 EASRAQAIEDLQKQPLAWYALGQLK 374

ref|ZP_00272268.1| COG0513: Superfamily II DNA and RNA helicases [Ralstonia metallidurans CH34]
(540 aa)

Score: 195 bits (495), Expect: 4.74499e-48
Length: 370, Idn/Pos/Gap = 127/197/14 (34%/53%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS+  +R + E G+   T IQA+AIP  L G D+LA A+TG+GKT  F +P+++L
Sbjct:   3 FSELGLSDKLVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPMLQL  62

Query: 272 LYKAKWMPRNGTG---------AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR 322
           L +       G           A+++ PTRELA Q+   + +   +      ++ GG   
Sbjct:  63 LSETAARANGGNAPRGARPNVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGI 122

Query: 323 RTEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEIL 382
             + E L  G +I+VATPGRLLDH+ + R     H+  LV+DEADR L++GF  ++ ++L
Sbjct: 123 NPQIEALRRGVDIVVATPGRLLDHV-AQRTIDLSHVELLVLDEADRMLDMGFIHDIRKVL 181

Query: 383 RILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ 442
            +LP  RQ +LFSAT +  +  LA            I+  +   T E + Q    V  E+
Sbjct: 182 NVLPPKRQNLLFSATFSDDIRALADRLLDNPA---SIEVARRNTTAETVAQRVFPVDRER 238

Query: 443 RFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEF 502
           +  LL   ++++   +++VF  + +G    AE L    +  L +HG + QS RT    EF
Sbjct: 239 KRELLAHLVRQHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALTEF 298

Query: 503 ARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLL 562
                  L+ TD+AARG+DI  +  +V +D P+ P++Y+HR+GRT R     G AI  + 
Sbjct: 299 KAGTLRLLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRA-GAEGEAISLVC 357

Query: 563 PSEVGFLQHL 572
             E G L+ +
Sbjct: 358 VDEHGLLRDI 367

emb|CAC49574.1| putative ATP-dependent RNA helicase protein [Sinorhizobium meliloti 1021]
ref|NP_437714.1| putative ATP-dependent RNA helicase protein [Sinorhizobium meliloti 1021]
pir||F95988 probable ATP-dependent RNA helicase protein [imported] - Sinorhizobium meliloti (strain 1021) magaplasmid pSymB
(503 aa)

Score: 195 bits (495), Expect: 4.90603e-48
Length: 365, Idn/Pos/Gap = 133/201/11 (36%/55%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LSE  +  +   GF + T IQA+AIPL L   D++  A+TG+GKT AF +P++E 
Sbjct:   4 FKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMIEK  63

Query: 272 LYK--AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
           L     +  PRN   A+++APTREL  QI   L            +V+GG +   + E+L
Sbjct:  64 LVADGRRPDPRN-IRALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQTEQL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G +ILVATPGRLLD L S +       R+LV+DEAD+ L++GF  ++ +I +++PK R
Sbjct: 123 ARGVDILVATPGRLLD-LVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKNR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ-RFRLLF 448
           QT+LFSAT    + +LA   +   P+   ++   P    + ++Q    VP +  +  +L 
Sbjct: 182 QTLLFSATMPKLIAELAG-EYLTDPVK--VEVSPPGKAADKVEQYVHFVPGKDLKTTILK 238

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
             L  N     ++F  + +G +   + L+++      +HG + Q +R      F   E  
Sbjct: 239 QTLTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIR 298

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVG 567
            L+ TDVAARG+DIP V  +  YD P+ P  Y+HR+GRTAR  +GR G AI F  P E+ 
Sbjct: 299 VLVATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTAR--NGRDGIAIAFCAPDEIR 356

Query: 568 FLQHL 572
            L+ +
Sbjct: 357 LLRDI 361

gb|EAL24855.1| GA15282-PA [Drosophila pseudoobscura]
(759 aa)

Score: 194 bits (494), Expect: 5.797e-48
Length: 349, Idn/Pos/Gap = 128/192/10 (36%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  + LS P +R I  +G+   T IQA  IP+AL GRDI   A TG+GKT A+++P +E 
Sbjct: 133 FYQMNLSRPLMRAIGVLGYIYPTPIQASTIPIALLGRDICGCAATGTGKTAAYMLPTLER 192

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L       +  T  +++ PTREL  Q++ V   L         + +GG + + +   L  
Sbjct: 193 LLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSIDVGLAIGGLDVKAQEAVLRQ 252

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I++ATPGRL+DH+++T  F  + +  L++DEADR L+  F E+M EI+    KTRQT
Sbjct: 253 NPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQT 312

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQ---RFRLLF 448
           MLFSAT + +V+DLA VS   KP+ + ++  Q VA    L+Q F  +  ++   R  +L 
Sbjct: 313 MLFSATMSEQVKDLAAVSL-DKPVKVFVNNNQQVAF--NLRQEFIRIREDKEGDREPILA 369

Query: 449 TFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHA 508
           + + R      +VF+ +         LL  + +   +LHG   Q +R  +  +F   +  
Sbjct: 370 SLICRTFHDHCMVFVQTKKQAHRLHILLGLLGIRAGELHGNLTQQQRLESLKKFKEEQID 429

Query: 509 TLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRA 557
            L+ TDVAARGLDI  V  ++ +  P   + YIHRVGRTAR     GRA
Sbjct: 430 VLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARA----GRA 474

gb|AAO75938.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
ref|NP_809744.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
(422 aa)

Score: 194 bits (494), Expect: 6.19715e-48
Length: 359, Idn/Pos/Gap = 116/200/12 (32%/55%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L+   L  ++ M F   T IQ +AIP+ L G+D++A A+TG+GKT AFL+PI+ 
Sbjct:   2 KFSELKLNANVLDALDAMRFDECTPIQEQAIPIILEGKDLIAVAQTGTGKTAAFLLPILN  61

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANR---RTEAE 327
            L +    P +    +I++PTRELA QI   +   +     +   V GG +      + +
Sbjct:  62 KLSEGG-HPEDAINCVIMSPTRELAQQIDQQMEGFSYFMPASSVAVYGGNDGILFEQQKK 120

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            L  G ++++ATPGRL+ HL  + G+V    + + ++DEADR L++GF E++ +I++ LP
Sbjct: 121 GLTLGADVVIATPGRLIAHL--SLGYVDLSKVSYFILDEADRMLDMGFYEDIMQIVKYLP 178

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           K RQT++FSAT   K++ LAK +    P  + +   +P    + + Q   +    Q+  +
Sbjct: 179 KERQTIMFSATMPAKIQQLAK-TILNNPAEIKLAVSRPA---DKIIQAAYVCYENQKLGI 234

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           + +       +++I+F SS   VK   + L  + + V ++H   +Q++R     EF    
Sbjct: 235 IRSLFTDEVPERVIIFASSKIKVKEVTKALKMMKLNVGEMHSDLEQAQREVVMHEFKAGR 294

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
              L+ TD+ ARG+DI  +  ++ +D P + ++Y+HR+GRTAR  +  G A+ F+   E
Sbjct: 295 INILVATDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARA-NNDGVALTFISEKE 352

ref|NP_707684.2| ATP-dependent RNA helicase [Shigella flexneri 2a str. 301]
gb|AAN43391.2| ATP-dependent RNA helicase [Shigella flexneri 2a str. 301]
ref|NP_837037.1| ATP-dependent RNA helicase [Shigella flexneri 2a str. 2457T]
gb|AAP16844.1| ATP-dependent RNA helicase [Shigella flexneri 2a str. 2457T]
(455 aa)

Score: 194 bits (494), Expect: 6.19715e-48
Length: 359, Idn/Pos/Gap = 132/205/20 (36%/57%/5%)

Query: 212 FDSLPLSEPT-LRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           F +L +  P  L  + E+G+  MT +QA A+P  L+G+D+   A+TGSGKT AF + +++
Sbjct:   4 FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQ  63

Query: 271 LLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRTEAEKL 329
            +  + +     T A+++ PTRELA Q+ G L  LA     T+ + + GG     + + L
Sbjct:  64 QIDASLFQ----TQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSL 119

Query: 330 INGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRILPKT 388
            +  +I+VATPGRLLDHLQ  +G V  + L  LV+DEADR L++GF + + +++R  P +
Sbjct: 120 QHAPHIIVATPGRLLDHLQ--KGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPAS 177

Query: 389 RQTMLFSATQTTKVEDLAKVS--FQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
           RQT+LFSAT     E +A +S   Q+ PL + ID+   +  +E   Q F    S+ +  L
Sbjct: 178 RQTLLFSATWP---EAIAAISGRVQRDPLAIEIDSTDALPPIE---QQFYETSSKGKIPL 231

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L   L  +Q    +VF ++    +   + LN ++   L LHG  +Q  R  T   FA   
Sbjct: 232 LQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVEQSALSLHGDLEQ--RDQTLVRFANGS 289

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
              L+ TDVAARGLDI +++ +V ++   +P+ ++HR+GRTAR  +  G AI F  P E
Sbjct: 290 ARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNS-GLAISFCAPEE 347

ref|ZP_00220232.1| COG0513: Superfamily II DNA and RNA helicases [Burkholderia cepacia R1808]
(490 aa)

Score: 194 bits (494), Expect: 6.35423e-48
Length: 358, Idn/Pos/Gap = 129/196/9 (36%/54%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           FD   L+   L+ I E G+   T IQA+AIP+ L+GRD++ +A+TG+GKT +F +PI++ 
Sbjct:  13 FDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQR  72

Query: 272 LY----KAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAE 327
           L      +    R+   A+I+ PTRELA Q+   +H  A H     A+V GG +   +  
Sbjct:  73 LLPHASTSASPARHPVRALILTPTRELADQVAANVHAYAKHTALRSAVVFGGVDMNPQMA 132

Query: 328 KLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPK 387
           +L  G  IL+ATPGRLLDH+Q     + + ++ LV+DEADR L++GF  ++  IL +LPK
Sbjct: 133 ELRRGVEILIATPGRLLDHVQQKTANLGQ-VQMLVLDEADRMLDMGFLPDLQRILNLLPK 191

Query: 388 TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLL 447
            RQT+LFSAT + +++ LA    +       I+  +  +T   + Q    V    +   +
Sbjct: 192 ERQTLLFSATFSPEIKKLASTYLRNPQT---IEVARSNSTNANVTQIVYDVAEGDKQAAV 248

Query: 448 FTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREH 507
              L+    K++IVF +S  G    A  L    V    +HG + Q +R      F R E 
Sbjct: 249 VQLLRGRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQALDAFKRGEI 308

Query: 508 ATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
             L+ TDVAARGLDI  +  ++ +D P   ++Y+HR+GRT R     G A+    P+E
Sbjct: 309 EALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRA-GATGDALSLCSPNE 365

gb|EAL60936.1| hypothetical protein DDB0219818 [Dictyostelium discoideum]
(785 aa)

Score: 194 bits (493), Expect: 7.26175e-48
Length: 355, Idn/Pos/Gap = 126/196/12 (35%/55%/3%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIP-IV 269
           +F   P     ++ I   GF   T IQ++A P+AL GRDI+  A+TGSGKTLAFL+P IV
Sbjct: 385 QFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIV 444

Query: 270 ELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
            +  +      +G   +++APTRELA+QI    +        +   V GGA++ T+   L
Sbjct: 445 HINAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAAL 504

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G  I++ATPGRL+D L+S +  +   + +LV+DEADR L++GFE ++ +I+  +   R
Sbjct: 505 KKGVEIVIATPGRLIDILESGKTNL-RRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR 563

Query: 390 QTMLFSATQTTKVEDLAKVSFQQK-PLHLG---IDAEQPVATVEGLQQGFTIVPSEQRFR 445
           QT++FSAT   +V+ LA         +H+G   I A   V  +  + Q F     E++ R
Sbjct: 564 QTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDF-----EKKER 618

Query: 446 LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARR 505
           +L       + +K+IVF  +  GV     +L +     + +HG + Q +R     +F   
Sbjct: 619 MLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNG 678

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAIL 559
               ++ TDVA+RGLDI  + ++V YD P+  + YIHR+GRTAR G  G   ++L
Sbjct: 679 MVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLL 733

gb|AAV90041.1| DNA and RNA helicase [Zymomonas mobilis subsp. mobilis ZM4]
ref|YP_163152.1| DNA and RNA helicase [Zymomonas mobilis subsp. mobilis ZM4]
(458 aa)

Score: 194 bits (493), Expect: 7.3226e-48
Length: 379, Idn/Pos/Gap = 129/204/10 (34%/53%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +L L    ++ ++ +G+++ T IQA+AIP  L G+D+   A+TG+GKT AF +P +  
Sbjct:   8 FKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIHY  67

Query: 272 L-YKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L    +  P+ G   +I++PTRELA QI    +D   H   +   V GG     +   L 
Sbjct:  68 LATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRMLD 127

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            GT+ILVATPGRLLD L   R  V + +   V+DEAD+ L++GF   +  I ++LPK RQ
Sbjct: 128 RGTDILVATPGRLLD-LIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQ 186

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQ-GFTIVPSEQRFRLLFT 449
           T+ FSAT    +++L+   F   P+ + +  +   +T E ++Q G  +  SE++  L  T
Sbjct: 187 TLFFSATMPKTIQELSS-QFLSDPVTVSVAPQS--STAERVEQFGIFVNQSEKQALLTIT 243

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
                   + +VF  + +G       L    +P   +HG + Q +R      F       
Sbjct: 244 LKNTPGLDRALVFTRTKHGADRVVRHLEAAGLPAAAIHGNKSQPQRERALNAFRNGRLKI 303

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGF 568
           L+ TD+AARG+D+P V  +  Y+ P+  ++Y+HR+GRTAR   GR G+AI F+   E  +
Sbjct: 304 LVATDIAARGIDVPGVSHVFNYELPNVAEQYVHRIGRTARA--GRDGQAISFIANDERSY 361

Query: 569 LQHL-RDAKVPLNEYEFPK 586
           L+ + R  +V L     P+
Sbjct: 362 LRSIERLTRVKLQILPLPE 380

ref|NP_176514.1| DEAD box RNA helicase, putative [Arabidopsis thaliana]
gb|AAG52143.1| putative RNA helicase; 42376-45543 [Arabidopsis thaliana]
pir||C96658 probable RNA helicase F9N12.13 [imported] - Arabidopsis thaliana
(798 aa)

Score: 194 bits (493), Expect: 7.3226e-48
Length: 405, Idn/Pos/Gap = 130/212/22 (32%/52%/5%)

Query: 197 QEQPKPSSGLLTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASART 256
           +E+ +P   + +  RFD   +S  TL+ +   G  +MT +Q   +   L G+D L  A+T
Sbjct: 315 EEKQEPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKT 374

Query: 257 GSGKTLAFLIPIVELLYKAKWMPRNGTG--------AIIIAPTRELAMQIFGVLHDLASH 308
           G+GK++AFL+P +E + KA     +G G        A+I+ PTRELA QI      L   
Sbjct: 375 GTGKSMAFLLPAIETVLKAM---NSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKF 431

Query: 309 HHQTRA-IVMGGANRRTEAEKLING-TNILVATPGRLLDHLQSTRGFV--FEHLRFLVID 364
           H       ++GG   + + ++L +    IL+ATPGRLLDH+++  G       L+  ++D
Sbjct: 432 HDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVD 491

Query: 365 EADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQP 424
           EAD  L++GF  ++ +I+  LP+ RQ++LFSAT   +V  ++++  ++   ++       
Sbjct: 492 EADLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGC 551

Query: 425 VATVEGLQQGFTIVPSEQRFRLLFTFLKRNQRK----KIIVFMSSCNGVKFYAELLNYID 480
           V T + ++Q   + P E  F L+   LK +       KIIVF S+         LL  + 
Sbjct: 552 VETHDKVRQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMK 611

Query: 481 VPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEY 540
           + V ++H ++ Q  RT    EF       L+ +DV+ARG++ P V  ++Q   P + ++Y
Sbjct: 612 LNVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQY 671

Query: 541 IHRVGRTARGVHGRGRAILFLLPSEVGFLQHLRDAKVPLNEYEFP 585
           IHR+GRT R   G G  +L + P E  FL  L+D  +PL     P
Sbjct: 672 IHRLGRTGREGKG-GEGLLLIAPWERYFLDELKD--LPLEPIPAP 713

gb|EAL36001.1| hypothetical protein Chro.30274 [Cryptosporidium hominis]
(868 aa)

Score: 194 bits (493), Expect: 7.63455e-48
Length: 351, Idn/Pos/Gap = 116/195/8 (33%/55%/2%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F S   S   L  I+ +G++  T IQ +  P  L+GRD++A ARTGSGKT  F++P++E 
Sbjct:   6 FQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIER  65

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLIN 331
           L         G   ++++PTRELA+Q + V+  LA   +     + GG++   + E L  
Sbjct:  66 L-GCSHSQIVGIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSG 124

Query: 332 GTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQT 391
             +I+VATPGRL  H+    G     ++ +++DEADR  E+G   ++ +IL  +PK RQ 
Sbjct: 125 NPDIVVATPGRLFHHIIEA-GLSLIAVKIIILDEADRLFEMGLASQIEKILESIPKNRQC 183

Query: 392 MLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL 451
           +L SAT  T +   +KV   + P  + ID++  ++  E L+  F  V  +++   L   L
Sbjct: 184 VLVSATMPTALASFSKVMLNE-PEVIQIDSDYILS--ETLKLTFLFVREDEKLASLLYLL 240

Query: 452 KRN--QRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
           +      ++ I+F ++ + V +  ++L   ++ V  ++G   Q  RT     F + +   
Sbjct: 241 RNTIPSHERAIIFCATKHHVDYIVKILESNNIIVSYIYGNMDQEARTMHLSTFRKNKSRA 300

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTAR-GVHGRGRAIL 559
           L+ TD+AARG+DIP + +++ +D P  PK ++HR GRTAR G HGR  +++
Sbjct: 301 LVVTDIAARGVDIPMIKYVINFDFPLSPKLFVHRTGRTARAGQHGRAFSLI 351

ref|NP_780228.1| ATP-dependent RNA helicase [Xylella fastidiosa Temecula1]
gb|AAO29877.1| ATP-dependent RNA helicase [Xylella fastidiosa Temecula1]
sp|Q879Y6|RHLB_XYLFT ATP-dependent RNA helicase rhlB
(543 aa)

Score: 194 bits (493), Expect: 7.63455e-48
Length: 359, Idn/Pos/Gap = 134/198/9 (37%/55%/2%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           LT   F S  L    L G+   GF   T IQA  +P+AL+GRDI   A+TG+GKTLAFL+
Sbjct:   6 LTNLNFSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLV  65

Query: 267 PIV-ELLYKAKWMPRNGTG--AIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRR 323
            +V  LL     + RN     A+I+APTRELA+QI+        +     A++ GG +  
Sbjct:  66 VVVNRLLSSPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYD 125

Query: 324 TEAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILR 383
            + E L  G ++++ATPGRL+D+L+             V+DEADR  ++GF +++  ILR
Sbjct: 126 RQREMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILR 185

Query: 384 ILPK--TRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSE 441
            LP+  +RQT+LFSAT + +V +LA   +  +P  L   AE    T   ++Q       E
Sbjct: 186 RLPERCSRQTLLFSATLSHRVLELA-YEYMNEPEKLV--AETESVTTTRVRQRIYFPAEE 242

Query: 442 QRFRLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFE 501
           ++  LL   L RN+  + +VF+++   V+  A  L+     V  L G   Q KR +    
Sbjct: 243 EKIPLLLGLLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNR 302

Query: 502 FARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILF 560
           F + +   L+ TDVAARGL I  V+++  YD P + ++Y+HR+GRTAR +   G AI F
Sbjct: 303 FQKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTAR-LGADGDAISF 360

ref|NP_974985.1| ethylene-responsive DEAD box RNA helicase, putative (RH30) [Arabidopsis thaliana]
(591 aa)

Score: 194 bits (493), Expect: 7.82806e-48
Length: 397, Idn/Pos/Gap = 131/209/11 (32%/52%/2%)

Query: 183 SPALQSLSSE----HASEQEQPKPSSGLLTPHR-FDSLPLSEPTLRGIEEMGFARMTEIQ 237
           SP +Q+++ +    + +E++       +  P + F      +  L  I ++GF   T IQ
Sbjct: 133 SPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQ 192

Query: 238 ARAIPLALSGRDILASARTGSGKTLAFLIP-IVELLYKAKWMPRNGTGAIIIAPTRELAM 296
           A+  P+AL GRD++  A TGSGKTLA+L+P +V +  + +    +G   +I+APTRELA+
Sbjct: 193 AQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAV 252

Query: 297 QIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLLDHLQSTRGFVFE 356
           QI                 + GGA +  +   L  G  I++ATPGRL+D L+     + +
Sbjct: 253 QIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNL-K 311

Query: 357 HLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQTMLFSATQTTKVEDLAKVSFQQKPLH 416
            + +LV+DEADR L++GFE ++ +I+  +   RQT+L+SAT   +VE LA+  F + P +
Sbjct: 312 RVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLAR-QFLRDP-Y 369

Query: 417 LGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTFLKR-NQRKKIIVFMSSCNGVKFYAEL 475
             I     +   + + Q   IVP+ +++  L T LK+     KI++F+ +  G       
Sbjct: 370 KAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQ 429

Query: 476 LNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPD 535
           L     P L +HG + QS+R     EF       +  TDVAARGLD+  +  +V YD P+
Sbjct: 430 LRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPN 489

Query: 536 EPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFLQHL 572
             ++YIHR+GRT R    +G A  F       F + L
Sbjct: 490 TLEDYIHRIGRTGRA-GAKGMAFTFFTHDNAKFAREL 525

ref|NP_249146.1| RNA helicase DbpA [Pseudomonas aeruginosa PAO1]
gb|AAG03844.1| RNA helicase DbpA [Pseudomonas aeruginosa PAO1]
pir||E83588 RNA helicase DbpA PA0455 [imported] - Pseudomonas aeruginosa (strain PAO1)
(458 aa)

Score: 194 bits (493), Expect: 8.02648e-48
Length: 385, Idn/Pos/Gap = 134/212/14 (34%/55%/3%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           +T   F SLPLS   L  ++ +G+  MT IQA+++PL L G D++A A+TGSGKT AF +
Sbjct:   1 MTSTAFSSLPLSADLLANLDSLGYREMTPIQAQSLPLILQGHDLIAQAKTGSGKTAAFGL  60

Query: 267 PIVELLYKAKWMPRN-GTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVM-GGANRRT 324
            ++  L      PR  G  A+++ PTRELA Q+   +  LA      + + + GG     
Sbjct:  61 ALLSPLN-----PRYFGCQALVLCPTRELADQVAKEIRRLARAADNIKVLTLCGGVPYGP 115

Query: 325 EAEKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRI 384
           +   L +G +++V TPGR+ +HL+     V + L  LV+DEADR L++GF + + EI+  
Sbjct: 116 QVASLEHGAHVVVGTPGRIQEHLRKGT-LVLDGLNTLVLDEADRMLDMGFYDSIAEIIGQ 174

Query: 385 LPKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRF 444
           LP+ RQT+LFSAT    +E LAK +F + P  + +++    + +E  Q+ F I P +QR 
Sbjct: 175 LPERRQTLLFSATYPDGIEKLAK-TFMRDPRQVRVESLHADSQIE--QRFFEIDP-KQRM 230

Query: 445 RLLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFAR 504
             +   L+  + +  + F  +    +  A+ L    +  L LHG  +Q +R      FA 
Sbjct: 231 DAVVRLLQHFRPQSCVAFCQTRQQCQELADALKAQRISALALHGDLEQRERDQVLTVFAN 290

Query: 505 REHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPS 564
           R    L+ TDVAARGLDI A++ ++  +   +P+ +IHR+GR+ R    +G A+  + P+
Sbjct: 291 RSCNVLVATDVAARGLDIAALETVINVELARDPEVHIHRIGRSGRAGE-KGLALSLVAPA 349

Query: 565 EVGFLQHLRD-AKVPLNEYEFPKEK 588
           E    Q + D  K PL  Y   + K
Sbjct: 350 EASRAQAIEDLQKQPLAWYALGQLK 374

ref|YP_086717.1| ATP-dependent RNA helicase [Bacillus cereus ZK]
gb|AAU20279.1| ATP-dependent RNA helicase [Bacillus cereus ZK]
(481 aa)

Score: 194 bits (493), Expect: 8.29889e-48
Length: 366, Idn/Pos/Gap = 120/194/9 (32%/53%/2%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           ++   F +  LS+   R +  +G+   TE+Q   IP+AL  +D++  ++TGSGKT +F I
Sbjct:   1 MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI  60

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           P+ E++   +W   N   A+++ PTRELA+Q+   + ++        A + G +    + 
Sbjct:  61 PLCEMV---EW-EENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQK 116

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            +L   T+I+V TPGR+LDH++       E L++LVIDEAD  L +GF +++  I+  LP
Sbjct: 117 LELKQKTHIVVGTPGRVLDHIEKGT-LSLERLKYLVIDEADEMLNMGFIDQVEAIIDELP 175

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
             R TMLFSAT    VE L++ ++   P H+ I A     T + ++     V  E++  L
Sbjct: 176 TKRMTMLFSATLPEDVERLSR-TYMNAPTHIEIKAAG--ITTDKIEHTLFEVREEEKLSL 232

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L            I+F  +   V      L+ ++ P   +HG   Q  R     +F + +
Sbjct: 233 LKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGK 292

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TDVAARG+DI  +  ++ YD P E + Y+HR GRT R  +  G+AI F+ P E 
Sbjct: 293 FRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNS-GKAITFITPYED 351

Query: 567 GFLQHL 572
            FL+ +
Sbjct: 352 RFLEEI 357

emb|CAH16507.1| hypothetical protein [Legionella pneumophila str. Lens]
ref|YP_127602.1| hypothetical protein lpl2267 [Legionella pneumophila str. Lens]
(589 aa)

Score: 194 bits (493), Expect: 8.36842e-48
Length: 387, Idn/Pos/Gap = 129/208/13 (33%/53%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +   S    + +E+M F   + IQA+ IPL L GRD +A A+TG+GKT AF +PI++ 
Sbjct:   8 FSTFNFSSALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQN  67

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLI 330
           L        + T A+I+APTRELA+Q+      L+ +    T A++ GG     + ++L 
Sbjct:  68 LSPEI----STTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLR 123

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +G  ++V TPGR+LDH+      +  +L+  ++DEAD  L +GF E++  IL  LP+ +Q
Sbjct: 124 SGAQVVVGTPGRILDHIDKGT-LLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQ 182

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
             LFSAT   ++  +A  ++   P  + I  E   ATV+ ++Q F      Q+   L   
Sbjct: 183 MALFSATMPYRIRQIAN-TYLNDPASIEIRME--TATVKSIEQRFLFASVHQKPDALIRV 239

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L+    + +IVF+ + +  +  AELL    +  + +HG   QS R     +F +     L
Sbjct: 240 LEVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDIL 299

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFL 569
           + TDVAARGLD+  V  ++ YD P + + Y+HR+GRT R   GR G  ILF+ P E   +
Sbjct: 300 VATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRA--GRSGVTILFVTPKESRLI 357

Query: 570 QHL-RDAKVPLNEYEFPKEKLADIQTQ 595
             + R  +  + + + P + +  +  Q
Sbjct: 358 SSIERHTRQRIEKVQVPNDHMIQMARQ 384

ref|NP_419652.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter crescentus CB15]
gb|AAK22820.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Caulobacter crescentus CB15]
pir||H87352 hypothetical protein CC0835 [imported] - Caulobacter crescentus
(476 aa)

Score: 194 bits (493), Expect: 8.50924e-48
Length: 367, Idn/Pos/Gap = 124/197/8 (33%/53%/2%)

Query: 211 RFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVE 270
           +F  L L++P L+ + E G+   T IQA+AIP+ L G+D+L  A+TG+GKT AF +PI++
Sbjct:   3 QFSDLGLAKPLLKALAEKGYKEPTPIQAQAIPVVLQGKDLLGIAQTGTGKTAAFALPILQ  62

Query: 271 LLYK-AKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKL 329
            L +  K  PR G   ++++PTRELA QI       A H   +   + GG     + + L
Sbjct:  63 RLAEDRKPAPRRGCRCLVLSPTRELATQIAENFKAYAVHMGLSVHTIYGGVKYGPQMKAL 122

Query: 330 INGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR 389
             G ++LVATPGRL+DH+ + +  +       V+DEAD+ L++GF   + +I   L K R
Sbjct: 123 AGGIDVLVATPGRLMDHM-AEKSAIVSGTEIFVLDEADQMLDLGFVVPIRKIAAQLTKNR 181

Query: 390 QTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFT 449
           Q + FSAT  +++  LA       P+ + +  +    TVE + Q    + ++++  LL  
Sbjct: 182 QNLFFSATMPSEIGKLAG-ELLNNPVQVSVAPQ--ATTVERIDQRVLFIEAQRKRPLLAE 238

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
                   + IVF  +  G    A+ LN   +    +HG + Q +R      F   E   
Sbjct: 239 LFADTSFSRTIVFTRTKRGADRVAKYLNAAGIEAASIHGDKTQGQRERALAAFKAGEMRA 298

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGF 568
           L+ TD+AARG+D+  V  ++ Y+ P+ P+ Y+HR+GRTAR   G+ G AI F    E   
Sbjct: 299 LVATDIAARGIDVNDVSHVINYELPNVPEAYVHRIGRTAR--KGKDGIAISFCADDERNL 356

Query: 569 LQHLRDA 575
           L+ ++ A
Sbjct: 357 LKDIQKA 363

ref|YP_022388.1| atp-dependent rna helicase, dead/deah box family [Bacillus anthracis str. 'Ames Ancestor']
ref|NP_847849.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. Ames]
ref|YP_031544.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. Sterne]
ref|NP_653921.1| DEAD, DEAD/DEAH box helicase [Bacillus anthracis str. A2012]
gb|AAP29335.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. Ames]
gb|AAT34863.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. 'Ames Ancestor']
gb|AAT57594.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus anthracis str. Sterne]
(481 aa)

Score: 194 bits (493), Expect: 8.50924e-48
Length: 366, Idn/Pos/Gap = 120/194/9 (32%/53%/2%)

Query: 207 LTPHRFDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLI 266
           ++   F +  LS+   R +  +G+   TE+Q   IP+AL  +D++  ++TGSGKT +F I
Sbjct:   1 MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI  60

Query: 267 PIVELLYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
           P+ E++   +W   N   A+++ PTRELA+Q+   + ++        A + G +    + 
Sbjct:  61 PLCEMV---EW-EENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQK 116

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILP 386
            +L   T+I+V TPGR+LDH++       E L++LVIDEAD  L +GF +++  I+  LP
Sbjct: 117 LELKQKTHIVVGTPGRVLDHIEKGT-LSLERLKYLVIDEADEMLNMGFIDQVEAIIDELP 175

Query: 387 KTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRL 446
             R TMLFSAT    VE L++ ++   P H+ I A     T + ++     V  E++  L
Sbjct: 176 TKRMTMLFSATLPEDVERLSR-TYMNAPTHIEIKAAG--ITTDKIEHTLFEVREEEKLSL 232

Query: 447 LFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARRE 506
           L            I+F  +   V      L+ ++ P   +HG   Q  R     +F + +
Sbjct: 233 LKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGK 292

Query: 507 HATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEV 566
              L+ TDVAARG+DI  +  ++ YD P E + Y+HR GRT R  +  G+AI F+ P E 
Sbjct: 293 FRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNS-GKAITFITPYED 351

Query: 567 GFLQHL 572
            FL+ +
Sbjct: 352 RFLEEI 357

pir||T46969 DEAD box RNA helicase homolog [imported] - Anabaena variabilis
gb|AAD02177.1| RNA helicase [Anabaena variabilis]
(425 aa)

Score: 194 bits (493), Expect: 8.65243e-48
Length: 387, Idn/Pos/Gap = 128/207/18 (33%/53%/4%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F  L LS   +  + E+G+ + T IQ ++IP  LSGRD+L  A+TG+GKT +F +P+  L
Sbjct:   3 FSHLGLSNEIINAVTELGYTKPTPIQMQSIPAVLSGRDLLRGAQTGTGKTASFTLPL--L  60

Query: 272 LYKAKWMPRN-----GTGAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEA 326
            Y  K + +         A+I+ PTRELA Q+   + D   +      ++ GG +   + 
Sbjct:  61 HYYPKIVLKALQCFLTIRALILTPTRELAAQVESSVRDYGKYLKLNSMVMFGGVSINPQK 120

Query: 327 EKLINGTNILVATPGRLLDHLQSTRGFV-FEHLRFLVIDEADRCLEIGFEEEMHEILRIL 385
           ++L    +ILVATPGRLLDH+Q  +G V    +  LV+DEADR L++GF  ++  IL +L
Sbjct: 121 QRLKGRVDILVATPGRLLDHVQ--QGTVNLSQIEILVLDEADRMLDMGFIRDIRRILSLL 178

Query: 386 PKTRQTMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFR 445
           PK RQ +LF AT + K+++LA     +  +   I+  +   T + + Q    +  +++  
Sbjct: 179 PKQRQNLLFFATFSDKIKELAAGLLNRPQM---IEVARRNVTADTVTQKVYKIERDRKRD 235

Query: 446 LLFTFLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARR 505
           LL   ++++   +++VF  +  G     + L +  +  L +HG + QS RT    +F   
Sbjct: 236 LLAHLIRKDNWYQVLVFTRTKYGADRLVKQLGHERIQALAIHGNKSQSARTHALAKFKNG 295

Query: 506 EHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSE 565
               L+ TD+AARGLDI  + ++V +D P  P++Y+HR+GRT R     G A+  +   E
Sbjct: 296 SLQVLVATDIAARGLDISELPYVVNFDLPYVPEDYVHRIGRTGRA-GASGEAVSLVSADE 354

Query: 566 VGFLQHLRDAKVPLNEYEFPKEKLADI 592
              L  +      L E   P E +A I
Sbjct: 355 YHLLADIEK----LIEKRLPFELVAGI 377

ref|NP_949008.1| putative ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009]
emb|CAE29111.1| putative ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009]
(474 aa)

Score: 194 bits (493), Expect: 8.79803e-48
Length: 378, Idn/Pos/Gap = 129/204/12 (34%/53%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F    L++P  R ++E  +   T IQA+ IPLAL+GRD++  A+TG+GKT +F +PI+  
Sbjct:  11 FQEFGLADPIARALQEENYHTPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPILHR  70

Query: 272 LYKAKWMPRNGT-GAIIIAPTRELAMQIFGVLHDLASHHHQTRAIVMGGANRRTEAEKLI 330
           L + +  P + T   ++++PTREL+ QI    +    H H + A+ +GG     +   L+
Sbjct:  71 LLQNRIKPASKTCRVLVLSPTRELSGQILDSFNAYGRHVHLSAALAIGGVPMGRQVRSLM 130

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
            G ++LVATPGRLLD +Q         + FLV+DEADR L++GF  ++ +I+  LP  RQ
Sbjct: 131 GGVDVLVATPGRLLDLVQGN-ALKLTQVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQ 189

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVA-TVEGLQQGFTIVPSEQRFRLLFT 449
           T+ FSAT    + DLA+    + P  + +    PV+ TVE + Q    +    +   L  
Sbjct: 190 TLFFSATMPKDIADLAE-QMLRDPARVAV---TPVSSTVERINQRVIQLDHSAKPAALAQ 245

Query: 450 FLKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHAT 509
            LK ++  + +VF  + +G     + L    +    +HG + Q+ R      F   E  T
Sbjct: 246 ILKDDKVNQALVFTRTKHGADKVVKGLARAGITADAIHGNKSQNYRERVLAAFRTGELRT 305

Query: 510 LLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRGRAILFLLPSEVGFL 569
           L+ TD+AARG+D+  V  +V +D P+ P+ Y+HR+GRTAR     G AI      E+ +L
Sbjct: 306 LVATDIAARGIDVDGVSHVVNFDLPNIPETYVHRIGRTARA-GADGTAISLCAGEEMAYL 364

Query: 570 QHLRDAKVPLNEYEFPKE 587
           + +      L +   PKE
Sbjct: 365 RDIEK----LIKVSLPKE 378

emb|CAH13447.1| hypothetical protein [Legionella pneumophila str. Paris]
ref|YP_124605.1| hypothetical protein lpp2294 [Legionella pneumophila str. Paris]
(589 aa)

Score: 194 bits (493), Expect: 8.87174e-48
Length: 387, Idn/Pos/Gap = 129/208/13 (33%/53%/3%)

Query: 212 FDSLPLSEPTLRGIEEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVEL 271
           F +   S    + +E+M F   + IQA+ IPL L GRD +A A+TG+GKT AF +PI++ 
Sbjct:   8 FSTFNFSSALNKALEDMKFITPSPIQAQTIPLILEGRDAIALAQTGTGKTAAFALPILQN  67

Query: 272 LYKAKWMPRNGTGAIIIAPTRELAMQIFGVLHDLASHHHQ-TRAIVMGGANRRTEAEKLI 330
           L        + T A+I+APTRELA+Q+      L+ +    T A++ GG     + ++L 
Sbjct:  68 LSPEI----STTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLR 123

Query: 331 NGTNILVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTRQ 390
           +G  ++V TPGR+LDH+      +  +L+  ++DEAD  L +GF E++  IL  LP+ +Q
Sbjct: 124 SGAQVVVGTPGRILDHIDKGT-LLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQ 182

Query: 391 TMLFSATQTTKVEDLAKVSFQQKPLHLGIDAEQPVATVEGLQQGFTIVPSEQRFRLLFTF 450
             LFSAT   ++  +A  ++   P  + I  E   ATV+ ++Q F      Q+   L   
Sbjct: 183 MALFSATMPYRIRQIAN-TYLNDPASIEIRME--TATVKSIEQRFLFASVHQKPDALIRV 239

Query: 451 LKRNQRKKIIVFMSSCNGVKFYAELLNYIDVPVLDLHGKQKQSKRTSTFFEFARREHATL 510
           L+    + +IVF+ + +  +  AELL    +  + +HG   QS R     +F +     L
Sbjct: 240 LEVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDIL 299

Query: 511 LCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGR-GRAILFLLPSEVGFL 569
           + TDVAARGLD+  V  ++ YD P + + Y+HR+GRT R   GR G  ILF+ P E   +
Sbjct: 300 VATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRA--GRSGVTILFVTPKESRLI 357

Query: 570 QHL-RDAKVPLNEYEFPKEKLADIQTQ 595
             + R  +  + + + P + +  +  Q
Sbjct: 358 SSIERHTRQRIEKVQVPNDHMIQMARQ 384