Cyanidioschyzon merolae Genome Project

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CMT068C (594 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)


E2F homolog [Oryza sativa (japonica cultivar-group)]

E2F protein [Triticum sp.]

transcription factor E2F [Daucus carota]

putative E2F transcription factor [Physcomitrella patens]

putative E2F homolog [Oryza sativa (japonica cultivar-group)]

PREDICTED: similar to hypothetical protein [Pan troglodytes]

mKIAA0075 protein [Mus musculus]

hypothetical protein [Homo sapiens]

E2f3 protein [Mus musculus]

hypothetical protein LOC496522 [Xenopus tropicalis]

transcription factor E2F1 [Homo sapiens]

PREDICTED: similar to hypothetical protein [Canis familiaris]

unnamed protein product [Mus musculus]

mKIAA4009 protein [Mus musculus]

E2F1 [Homo sapiens]

E2F-1 transcription factor [Gallus gallus]

transcription factor E2F [Xenopus laevis]

transcription factor E2F like protein [Homo sapiens]

PREDICTED: similar to E2f3 protein [Rattus norvegicus]
 
dbj|BAD27913.1| E2F homolog [Oryza sativa (japonica cultivar-group)]
dbj|BAB20932.1| E2F homolog [Oryza sativa]
(436 aa)

Score: 52 bits (124), Expect: 3.85626e-05
Length: 151, Idn/Pos/Gap = 46/72/24 (30%/47%/15%)

Query: 312 SGPAT-----GEDCHPDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLA 366
           +GP T     G   +P +P  + RY  S+G LT   + L     +G          ++ A
Sbjct:  88 AGPQTPTSNVGSPLNPPTPVGTCRYDSSLGLLTKKFINLLKQAPDGILDL------NNAA 141

Query: 367 TALKVAPRRIYDVISVLEAIGILEREARGGNYKTPSMRIRLRSLTPSRLLSAATGARAQR 426
             L+V  RRIYD+ +VLE IG++E        KT   RIR + L  S  +    G  A  
Sbjct: 142 ETLEVQKRRIYDITNVLEGIGLIE--------KTLKNRIRWKGLDDSG-VELDNGLSA-- 190

Query: 427 AHLERQLEDLANISSELDDDLHNLRCRLRDL 457
             L+ ++E+L+     LD+ + ++R +LR L
Sbjct: 191 --LQAEVENLSLKEQALDERISDMREKLRGL 219



emb|CAB53258.1| E2F protein [Triticum sp.]
(458 aa)

Score: 50 bits (119), Expect: 0.000137076
Length: 146, Idn/Pos/Gap = 44/69/23 (30%/47%/15%)

Query: 314 PATGEDCHPDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAP 373
           P  G   +P +P  + RY  S+G LT   + L     +G          ++ A  L+V  
Sbjct: 130 PNVGSPLNPSTPAGTCRYDSSLGLLTKKFINLLKQAEDGILDL------NNAAETLEVQK 183

Query: 374 RRIYDVISVLEAIGILEREARGGNYKTPSMRIRLRSLTPS--RLLSAATGARAQRAHLER 431
           RRIYD+ +VLE IG++E        KT   RIR + L  S   L +  +G       L+ 
Sbjct: 184 RRIYDITNVLEGIGLIE--------KTLKNRIRWKGLDDSGVELDNGLSG-------LQT 228

Query: 432 QLEDLANISSELDDDLHNLRCRLRDL 457
           ++E+L      LD+ + ++R +LR L
Sbjct: 229 EVENLNLQEQALDERISDMREKLRGL 254



emb|CAB95727.1| transcription factor E2F [Daucus carota]
(431 aa)

Score: 50 bits (119), Expect: 0.00014532
Length: 136, Idn/Pos/Gap = 39/64/18 (28%/47%/13%)

Query: 322 PDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVIS 381
           P +P  S RY  S+G LT   + L     +G          ++ A  L+V  RRIYD+ +
Sbjct: 101 PLTPAGSCRYDSSLGLLTKKFINLIKQAEDGTLDL------NNAAETLEVQKRRIYDITN 154

Query: 382 VLEAIGILEREARGGNYKTPSMRIRLRSLTPSRLLSAATGARAQRAHLERQLEDLANISS 441
           VLE IG++E++ +         RI  + +  SR       +      L+ ++E L+    
Sbjct: 155 VLEGIGLIEKKLKN--------RIHWKGIDASRPGEMEDDSNV----LQAEVEKLSLEEK 202

Query: 442 ELDDDLHNLRCRLRDL 457
            LDD +  ++ +LRDL
Sbjct: 203 RLDDRIREMQEKLRDL 218



emb|CAD21953.1| putative E2F transcription factor [Physcomitrella patens]
(400 aa)

Score: 50 bits (118), Expect: 0.000224262
Length: 134, Idn/Pos/Gap = 42/63/18 (31%/47%/13%)

Query: 324 SPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVISVL 383
           +P ++ RY  S+G LT   + L     +G          +  A  L V  RRIYD+ +VL
Sbjct:  68 TPTSTCRYDSSLGLLTKKFIDLIKQADDGVLDL------NKAADTLHVQKRRIYDITNVL 121

Query: 384 EAIGILEREARGGNYKTPSMRIRLRSLTPSRLLSAATGARAQRAHLERQLEDLANISSEL 443
           E IG++E++ +         RIR + L   R   A   A    A L  ++EDL     +L
Sbjct: 122 EGIGLIEKKLKN--------RIRWKGLGMVRNAEAKDDA----AGLLAEVEDLRIKEKKL 169

Query: 444 DDDLHNLRCRLRDL 457
           D+ +  +R RLR L
Sbjct: 170 DESISEMRERLRSL 183



dbj|BAD73815.1| putative E2F homolog [Oryza sativa (japonica cultivar-group)]
(475 aa)

Score: 49 bits (117), Expect: 0.000267209
Length: 151, Idn/Pos/Gap = 46/72/24 (30%/47%/15%)

Query: 312 SGPAT-----GEDCHPDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLA 366
           +GP T     G   +P +P  + RY  S+G LT   + L     +G          ++ A
Sbjct: 127 AGPQTPTSNVGSPLNPPTPVGTCRYDSSLGLLTKKFINLLKQAPDGILDL------NNAA 180

Query: 367 TALKVAPRRIYDVISVLEAIGILEREARGGNYKTPSMRIRLRSLTPSRLLSAATGARAQR 426
             L+V  RRIYD+ +VLE IG++E        KT   RIR + L  S  +    G  A  
Sbjct: 181 ETLEVQKRRIYDITNVLEGIGLIE--------KTLKNRIRWKGLDDSG-VELDNGLSA-- 229

Query: 427 AHLERQLEDLANISSELDDDLHNLRCRLRDL 457
             L+ ++E+L+     LD+ + ++R +LR L
Sbjct: 230 --LQAEVENLSLKEQALDERISDMREKLRGL 258



ref|XP_527243.1| PREDICTED: similar to hypothetical protein [Pan troglodytes]
(409 aa)

Score: 48 bits (113), Expect: 0.000838091
Length: 81, Idn/Pos/Gap = 27/42/6 (33%/51%/7%)

Query: 322 PDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVIS 381
           PDSP+   RY  S+G LT   + L +   +G          +  A  LKV  RRIYD+ +
Sbjct:  63 PDSPKKKTRYDTSLGLLTKKFIQLLSQSPDGVLDL------NKAAEVLKVQKRRIYDITN 116

Query: 382 VLEAIGILEREARGGNYKTPS 402
           VLE I +++++++      PS
Sbjct: 117 VLEGIHLIKKKSKKQRPMDPS 137



dbj|BAC97858.1| mKIAA0075 protein [Mus musculus]
(321 aa)

Score: 46 bits (110), Expect: 0.00149047
Length: 73, Idn/Pos/Gap = 25/40/6 (34%/54%/8%)

Query: 322 PDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVIS 381
           PDSP+   RY  S+G LT   + L +   +G          +  A  LKV  RRIYD+ +
Sbjct:  26 PDSPKKKTRYDTSLGLLTKKFIQLLSQSPDGVLDL------NKAAEVLKVQKRRIYDITN  79

Query: 382 VLEAIGILEREAR 394
           VLE I +++++++
Sbjct:  80 VLEGIHLIKKKSK  92



emb|CAH18140.1| hypothetical protein [Homo sapiens]
(334 aa)

Score: 46 bits (110), Expect: 0.00167515
Length: 73, Idn/Pos/Gap = 25/40/6 (34%/54%/8%)

Query: 322 PDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVIS 381
           PDSP+   RY  S+G LT   + L +   +G          +  A  LKV  RRIYD+ +
Sbjct:  39 PDSPKKKTRYDTSLGLLTKKFIQLLSQSPDGVLDL------NKAAEVLKVQKRRIYDITN  92

Query: 382 VLEAIGILEREAR 394
           VLE I +++++++
Sbjct:  93 VLEGIHLIKKKSK 105



gb|AAH24125.1| E2f3 protein [Mus musculus]
(335 aa)

Score: 46 bits (110), Expect: 0.001732
Length: 73, Idn/Pos/Gap = 25/40/6 (34%/54%/8%)

Query: 322 PDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVIS 381
           PDSP+   RY  S+G LT   + L +   +G          +  A  LKV  RRIYD+ +
Sbjct:  40 PDSPKKKTRYDTSLGLLTKKFIQLLSQSPDGVLDL------NKAAEVLKVQKRRIYDITN  93

Query: 382 VLEAIGILEREAR 394
           VLE I +++++++
Sbjct:  94 VLEGIHLIKKKSK 106



ref|NP_001011109.1| hypothetical protein LOC496522 [Xenopus tropicalis]
gb|AAH84507.1| Hypothetical LOC496522 [Xenopus tropicalis]
(427 aa)

Score: 46 bits (108), Expect: 0.00315828
Length: 136, Idn/Pos/Gap = 38/63/18 (27%/46%/13%)

Query: 322 PDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVIS 381
           P SP    RY  S+G LT   + L +  ++G          +  A  LKV  RRIYD+ +
Sbjct: 132 PKSPLEKTRYDTSLGLLTKKFIQLLSQSSDGVVDL------NRAAEVLKVQKRRIYDITN 185

Query: 382 VLEAIGILEREARGGNYKTPSMRIRLRSLTPSRLLSAATGARAQRAHLERQLEDLANISS 441
           VLE I +++++++          I+    T    L    G  A+   L ++L +LA   +
Sbjct: 186 VLEGIHLIKKKSKN--------NIQWMGCT----LPDDGGNLAKSQELSKELSELAQEEN 233

Query: 442 ELDDDLHNLRCRLRDL 457
           +LD+ + N    L+ L
Sbjct: 234 KLDELIKNCTLDLKHL 249



gb|AAC50719.1| transcription factor E2F1 [Homo sapiens]
(437 aa)

Score: 45 bits (107), Expect: 0.00337629
Length: 146, Idn/Pos/Gap = 44/62/24 (30%/42%/16%)

Query: 305 HDQHLHGSGPATGEDCHP----DSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQ 360
           H      SGPA G   HP     SP    RY  S+   T   L L +  A+G        
Sbjct:  98 HQYLAESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDL---- 153

Query: 361 TCSSLATALKVAPRRIYDVISVLEAIGILEREARG-----GNYKTPSMRIRLRSLTPSRL 415
             +  A  LKV  RRIYD+ +VLE I ++ ++++      G++ T  +  RL  LT    
Sbjct: 154 --NWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTTVGVGGRLEGLTQD-- 209

Query: 416 LSAATGARAQRAHLERQLEDLANISS 441
                    Q    E+QL+ L NI +
Sbjct: 210 -------LRQLQESEQQLDHLMNICT 228



ref|XP_545361.1| PREDICTED: similar to hypothetical protein [Canis familiaris]
(665 aa)

Score: 45 bits (107), Expect: 0.00349088
Length: 84, Idn/Pos/Gap = 29/44/8 (34%/52%/9%)

Query: 311 GSGPATGEDCHPDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALK 370
           G G AT     PDSP+   RY  S+G LT   + L +   +G          +  A  LK
Sbjct: 337 GKGRATLRS--PDSPKKKTRYDTSLGLLTKKFIQLLSQSPDGVLDL------NKAAEVLK 388

Query: 371 VAPRRIYDVISVLEAIGILEREAR 394
           V  RRIYD+ +VLE I +++++++
Sbjct: 389 VQKRRIYDITNVLEGIHLIKKKSK 412



dbj|BAB30968.1| unnamed protein product [Mus musculus]
(385 aa)

Score: 45 bits (107), Expect: 0.0038585
Length: 115, Idn/Pos/Gap = 37/53/16 (32%/46%/13%)

Query: 307 QHLHGS-GPATGEDCHP----DSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQT 361
           Q+L GS GP  G   HP     SP    RY  S+   T   L L +  A+G         
Sbjct:  49 QYLAGSSGPFRGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDL----- 103

Query: 362 CSSLATALKVAPRRIYDVISVLEAIGILEREARG-----GNYKTPSMRIRLRSLT 411
            +  A  LKV  RRIYD+ +VLE I ++ ++++      G++    +  RL  LT
Sbjct: 104 -NWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTMVGIGKRLEGLT 157



dbj|BAD90151.1| mKIAA4009 protein [Mus musculus]
(381 aa)

Score: 45 bits (107), Expect: 0.00392343
Length: 115, Idn/Pos/Gap = 37/53/16 (32%/46%/13%)

Query: 307 QHLHGS-GPATGEDCHP----DSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQT 361
           Q+L GS GP  G   HP     SP    RY  S+   T   L L +  A+G         
Sbjct:  45 QYLAGSSGPFRGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSRSADGVVDL-----  99

Query: 362 CSSLATALKVAPRRIYDVISVLEAIGILEREARG-----GNYKTPSMRIRLRSLT 411
            +  A  LKV  RRIYD+ +VLE I ++ ++++      G++    +  RL  LT
Sbjct: 100 -NWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTMVGIGKRLEGLT 153



emb|CAC08486.1| E2F1 [Homo sapiens]
gb|AAM47604.1| E2F transcription factor 1 [Homo sapiens]
gb|AAH58902.1| E2F transcription factor 1 [Homo sapiens]
gb|AAH50369.1| E2F transcription factor 1 [Homo sapiens]
sp|Q01094|E2F1_HUMAN Transcription factor E2F1 (E2F-1) (Retinoblastoma binding protein 3) (RBBP-3) (PRB-binding protein E2F-1) (PBR3) (Retinoblastoma-associated protein 1) (RBAP-1)
gb|AAA35782.1| E2F-1
ref|NP_005216.1| E2F transcription factor 1 [Homo sapiens]
(437 aa)

Score: 45 bits (107), Expect: 0.00398945
Length: 146, Idn/Pos/Gap = 44/62/24 (30%/42%/16%)

Query: 305 HDQHLHGSGPATGEDCHP----DSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQ 360
           H      SGPA G   HP     SP    RY  S+   T   L L +  A+G        
Sbjct:  98 HQYLAESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDL---- 153

Query: 361 TCSSLATALKVAPRRIYDVISVLEAIGILEREARG-----GNYKTPSMRIRLRSLTPSRL 415
             +  A  LKV  RRIYD+ +VLE I ++ ++++      G++ T  +  RL  LT    
Sbjct: 154 --NWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTTVGVGGRLEGLTQD-- 209

Query: 416 LSAATGARAQRAHLERQLEDLANISS 441
                    Q    E+QL+ L NI +
Sbjct: 210 -------LRQLQESEQQLDHLMNICT 228



ref|NP_990550.1| E2F-1 transcription factor [Gallus gallus]
emb|CAA61533.1| E2F-1 transcription factor [Gallus gallus]
sp|Q90977|E2F1_CHICK Transcription factor E2F1 (E2F-1)
(403 aa)

Score: 45 bits (106), Expect: 0.00430056
Length: 159, Idn/Pos/Gap = 44/66/20 (27%/41%/12%)

Query: 324 SPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVISVL 383
           SP    RY  S+   T   L L +   +G          +  A  LKV  RRIYD+ +VL
Sbjct:  98 SPGEKSRYETSLNLTTKRFLELLSQSPDGVVDL------NWAAEVLKVQKRRIYDITNVL 151

Query: 384 EAIGILEREARGGNYKTPSMRIRLRSLTPSRLLSAATGARAQRAHLERQLEDLANISSEL 443
           E I ++ ++++       S                A GA +++  LE++L DL     +L
Sbjct: 152 EGIQLITKKSKNNIQWLGS--------------QVAAGASSRQRLLEKELRDLQAAERQL 197

Query: 444 DDDLHNLRCRLRDLLRQLLYRPGSTVTCALETATVVASE 482
           DD +     RLR L      +  + VTC    + V  SE
Sbjct: 198 DDLIQTCTVRLRLLTEDPSNQHAAYVTCQDLRSIVDPSE 236



gb|AAF44124.1| transcription factor E2F [Xenopus laevis]
(429 aa)

Score: 45 bits (106), Expect: 0.00479328
Length: 136, Idn/Pos/Gap = 37/63/18 (27%/46%/13%)

Query: 322 PDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVIS 381
           P SP    RY  S+G LT   + L +  ++G          +  A  LKV  RRIYD+ +
Sbjct: 134 PKSPLEKTRYDTSLGLLTKKFIQLLSQSSDGVVDL------NKAAEVLKVQKRRIYDITN 187

Query: 382 VLEAIGILEREARGGNYKTPSMRIRLRSLTPSRLLSAATGARAQRAHLERQLEDLANISS 441
           VLE I +++++++          I+    +    L    G  A+   L ++L +LA   +
Sbjct: 188 VLEGIHLIKKKSKN--------NIQWMGCS----LPDDGGNLAKSQELSKELSELAQEEN 235

Query: 442 ELDDDLHNLRCRLRDL 457
           +LD+ + N    L+ L
Sbjct: 236 KLDELIKNCTLDLKHL 251



gb|AAB24289.1| transcription factor E2F like protein [Homo sapiens]
(476 aa)

Score: 45 bits (105), Expect: 0.00590506
Length: 146, Idn/Pos/Gap = 44/62/24 (30%/42%/16%)

Query: 305 HDQHLHGSGPATGEDCHP----DSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQ 360
           H      SGPA G   HP     SP    RY  S+   T   L L +  A+G        
Sbjct: 137 HQYLAESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDL---- 192

Query: 361 TCSSLATALKVAPRRIYDVISVLEAIGILEREARG-----GNYKTPSMRIRLRSLTPSRL 415
             +  A  LKV  RRIYD+ +VLE I ++ ++++      G++ T  +  RL  LT    
Sbjct: 193 --NWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTTVGVGGRLEGLTQD-- 248

Query: 416 LSAATGARAQRAHLERQLEDLANISS 441
                    Q    E+QL+ L NI +
Sbjct: 249 -------LRQLQESEQQLDHLMNICT 267



ref|XP_574021.1| PREDICTED: similar to E2f3 protein [Rattus norvegicus]
(286 aa)

Score: 44 bits (104), Expect: 0.00888756
Length: 73, Idn/Pos/Gap = 25/40/6 (34%/54%/8%)

Query: 322 PDSPRTSGRYARSIGFLTAHLLGLFAPQAEGKASYAEHQTCSSLATALKVAPRRIYDVIS 381
           PDSP+   RY  S+G LT   + L +   +G          +  A  LKV  RRIYD+ +
Sbjct: 214 PDSPKKKTRYDTSLGLLTKKFIQLLSQSPDGVLDL------NKAAEVLKVQKRRIYDITN 267

Query: 382 VLEAIGILEREAR 394
           VLE I +++++++
Sbjct: 268 VLEGIHLIKKKSK 280