BLAST output

CMT386C (374 aa)
by blastp 2.2.10 [Oct-19-2004] against nr [Apr-30-2005] (XML result)


		hypothetical protein DDB0206194 [Dictyostelium discoideum]
		expressed protein [Arabidopsis thaliana]
		unknown protein [Arabidopsis thaliana]
		hypothetical protein [Arabidopsis thaliana]
		unnamed protein product [Arabidopsis thaliana]

gb|EAL67997.1| hypothetical protein DDB0206194 [Dictyostelium discoideum]
(394 aa)

Score: 85 bits (209), Expect: 2.83669e-15
Length: 182, Idn/Pos/Gap = 50/92/4 (27%/50%/2%)

Query:  86 AVQTKRMIVRYRRIPGSVLHKYHVTAELSAPLENLCCVLAEPDLFGQLFWYVRDIKLLVP 145
           ++QT   I    +  GS +H   +   +  P+ N+C ++ E DL+      + + K+L  
Sbjct: 135 SIQTVDGIHSMYKEHGSGIHSVRIEGIIDQPIFNVCSIIMEADLYYTWIPRLLESKILNQ 194

Query: 146 SGRVQRAVYARFYAPWPFADRTIYLVGRGIDALDEPSQSVYIVIRSVRPADGAAWRAAER 205
             R +R +Y +   PWP  DR I L G G+D L+E +Q V +V RS+R  D     + + 
Sbjct: 195 DDRFKRLIYCKASCPWPVNDRDICLYGYGVDMLEEENQ-VVVVSRSIRDQDLIGNTSLKY 253

Query: 206 MRERVADQRSVTVEAR---ACFELHPVSRGRTRVRLVGVFDPRIKFIPASLINWASRKII 262
               +   +  TV A+   + F + P+S  +T V++V + DP ++ +P  L+N+ + +  
Sbjct: 254 AETIIPQVKGNTVRAKSEISGFTIKPISATQTYVQVVSLTDPNMQLLPKWLLNFVTTQFC 313

Query: 263 RH 264
            +
Sbjct: 314 HY 315

ref|NP_196262.3| expressed protein [Arabidopsis thaliana]
(479 aa)

Score: 55 bits (133), Expect: 1.76766e-06
Length: 275, Idn/Pos/Gap = 66/114/35 (24%/41%/12%)

Query:  63 RETDDLSLFLQDLNDES-----------DPAYSIAVQTKRMIVRYRR-IPGSVLHKYHVT 110
           + TDD+S  L  L   S           D  + +    +   V YR  + GS  H   V 
Sbjct:  47 KRTDDVSKLLSKLRSVSMTDHQVSKLTNDGDWKLKHDLEDCRVMYREGLDGSPFHTLLVE 106

Query: 111 AELSAPLENLCCVLAEPDLFGQLFWY-------VRDIK--LLVPSGRVQRAVYARFYAPW 161
             +  P+    CV  E  L+ +  W+        R +K   L   G  ++   AR   PW
Sbjct: 107 GYMDGPIHECLCVSWESTLYKK--WWPQYAFPPFRILKSTCLQKVGVGEQICLARMKVPW 164

Query: 162 PFADRTIYLVGRGIDALDEPSQSVYIVIRSVRPADGAAWRAAERMRERVADQRSVTVEAR 221
           P  +R + L     +   +    V I++ ++   +     + + +     D  +V ++  
Sbjct: 165 PLTEREMILHYFSFEYFKD--GLVVILLNTISDLNSIGVSSTDIIIPESPD--AVRMDLV 220

Query: 222 ACFELHPVSRGRTRVRLVGVFDPRIKFIPASLINWASRKIIRHGTKQLGWVAAHLSKLQT 281
             F L  V+  R+  R +G  D ++  +P SL+N+ SR++I +G +      A ++K   
Sbjct: 221 GGFVLQKVTPQRSYFRTIGDMDIKLDLMPPSLMNFISRQLIGNGFRLYKKSVASVAKFDE 280

Query: 282 EHWKRLHDPEWCFGVYPWLRRRLASFWWTREAVSE 316
           ++ + L DP     +Y  +RR L S   T EAV E
Sbjct: 281 DYSRALTDP-----LYTKIRRALYS---TDEAVEE 307

gb|AAM91163.1| unknown protein [Arabidopsis thaliana]
gb|AAM13054.1| unknown protein [Arabidopsis thaliana]
ref|NP_851032.1| expressed protein [Arabidopsis thaliana]
(405 aa)

Score: 54 bits (130), Expect: 4.2806e-06
Length: 233, Idn/Pos/Gap = 58/101/24 (24%/43%/10%)

Query:  94 VRYRR-IPGSVLHKYHVTAELSAPLENLCCVLAEPDLFGQLFWY-------VRDIK--LL 143
           V YR  + GS  H   V   +  P+    CV  E  L+ +  W+        R +K   L
Sbjct:  15 VMYREGLDGSPFHTLLVEGYMDGPIHECLCVSWESTLYKK--WWPQYAFPPFRILKSTCL  72

Query: 144 VPSGRVQRAVYARFYAPWPFADRTIYLVGRGIDALDEPSQSVYIVIRSVRPADGAAWRAA 203
              G  ++   AR   PWP  +R + L     +   +    V I++ ++   +     + 
Sbjct:  73 QKVGVGEQICLARMKVPWPLTEREMILHYFSFEYFKD--GLVVILLNTISDLNSIGVSST 130

Query: 204 ERMRERVADQRSVTVEARACFELHPVSRGRTRVRLVGVFDPRIKFIPASLINWASRKIIR 263
           + +     D  +V ++    F L  V+  R+  R +G  D ++  +P SL+N+ SR++I 
Sbjct: 131 DIIIPESPD--AVRMDLVGGFVLQKVTPQRSYFRTIGDMDIKLDLMPPSLMNFISRQLIG 188

Query: 264 HGTKQLGWVAAHLSKLQTEHWKRLHDPEWCFGVYPWLRRRLASFWWTREAVSE 316
           +G +      A ++K   ++ + L DP     +Y  +RR L S   T EAV E
Sbjct: 189 NGFRLYKKSVASVAKFDEDYSRALTDP-----LYTKIRRALYS---TDEAVEE 233

gb|AAF23188.1| hypothetical protein [Arabidopsis thaliana]
gb|AAP21267.1| At3g11720 [Arabidopsis thaliana]
ref|NP_187778.1| expressed protein [Arabidopsis thaliana]
(542 aa)

Score: 48 bits (113), Expect: 0.000387501
Length: 239, Idn/Pos/Gap = 58/95/39 (24%/39%/16%)

Query:  46 ITAARAASFGPLIEEIFRETDDLSLFLQDLNDESDPA----YSIAVQTKRMIVRYRR-IP 100
           I   R A+    IE++      +S   QDL+  S  A    + +    K   V YR  + 
Sbjct:  45 ILDQRVAALSSTIEKL----RSVSTKDQDLSKSSTEASYGDWKVKHDDKDCRVMYREGLK 100

Query: 101 GSVLHKYHVTAELSAPLENLCCVLAEPDLFGQLFWYVRDIKLLVPSGRVQRA-------- 152
           GS  H   V       +E+  CV  E   + +  W+    KL  PS RV  A        
Sbjct: 101 GSPFHTLLVEGCTDGTIEDCLCVCWESSFYEK--WWP---KLTFPSFRVLEAKCLQKFRI 155

Query: 153 ----VYARFYAPWPFADRTIYLVGRGIDALDEPSQSVYIVIRSVRPADGAAWRAAERMRE 208
                  R  APWP  DR   L     +   +    V I++ S+    G+          
Sbjct: 156 DEQICLLRVKAPWPLTDREAVLQFFVFEYFKD--DLVIILLNSIEVESGS---------- 203

Query: 209 RVADQRSVTVEARACFELHPVSRGRTRVRLVGVFDPRIKFIPASLINWASRKIIRHGTK 267
            VA+  +V ++      +  V+  ++ +R +   D ++  +P SLIN+ SR+++ +G K
Sbjct: 204 -VAEVNAVRIDFVGGVAIQKVTPEKSYIRFIAEVDIKLDLVPPSLINFMSRQLLGNGFK 261

dbj|BAB08966.1| unnamed protein product [Arabidopsis thaliana]
(437 aa)

Score: 46 bits (108), Expect: 0.00171112
Length: 161, Idn/Pos/Gap = 39/74/12 (24%/45%/7%)

Query: 156 RFYAPWPFADRTIYLVGRGIDALDEPSQSVYIVIRSVRPADGAAWRAAERMRERVADQRS 215
           +   PWP  +R + L     +   +    V I++ ++   +     + + +     D  +
Sbjct: 117 KMKVPWPLTEREMILHYFSFEYFKD--GLVVILLNTISDLNSIGVSSTDIIIPESPD--A 172

Query: 216 VTVEARACFELHPVSRGRTRVRLVGVFDPRIKFIPASLINWASRKIIRHGTKQLGWVAAH 275
           V ++    F L  V+  R+  R +G  D ++  +P SL+N+ SR++I +G +      A 
Sbjct: 173 VRMDLVGGFVLQKVTPQRSYFRTIGDMDIKLDLMPPSLMNFISRQLIGNGFRLYKKSVAS 232

Query: 276 LSKLQTEHWKRLHDPEWCFGVYPWLRRRLASFWWTREAVSE 316
           ++K   ++ + L DP     +Y  +RR L S   T EAV E
Sbjct: 233 VAKFDEDYSRALTDP-----LYTKIRRALYS---TDEAVEE 265

Cyanidioschyzon merolae Genome Project